Long chain acyl-CoA synthetase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AMP-binding | PF00501 | 60 - 412 | 8.6e-59 | AMP-binding enzyme |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 533 |
| AciI | CCGC | 2 cut(s) | 513, 1571 |
| AclWI | GGATC | 3 cut(s) | 199, 715, 1545 |
| AcsI | RAATTY | 5 cut(s) | 196, 461, 478, 640, 998 |
| AcuI | CTGAAG | 3 cut(s) | 318, 743, 1275 |
| AfaI | GTAC | 2 cut(s) | 66, 625 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1100, 1159, 1160 |
| AflIII | ACRYGT | 1 cut(s) | 67 |
| AgsI | TTSAA | 8 cut(s) | 150, 306, 320, 639, 714, 1133, 1394, 1558 |
| AjnI | CCWGG | 2 cut(s) | 722, 983 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 933, 965 |
| AluBI | AGCT | 8 cut(s) | 311, 390, 690, 910, 1017, 1056, 1141, 1449 |
| AluI | AGCT | 8 cut(s) | 311, 390, 690, 910, 1017, 1056, 1141, 1449 |
| Alw26I | GTCTC | 1 cut(s) | 1365 |
| AlwI | GGATC | 3 cut(s) | 199, 715, 1545 |
| Ama87I | CYCGRG | 1 cut(s) | 795 |
| AoxI | GGCC | 2 cut(s) | 225, 660 |
| ApeKI | GCWGC | 4 cut(s) | 581, 971, 1017, 1020 |
| ApoI | RAATTY | 5 cut(s) | 196, 461, 478, 640, 998 |
| AseI | ATTAAT | 1 cut(s) | 587 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 465, 1448 |
| AspLEI | GCGC | 1 cut(s) | 976 |
| AspS9I | GGNCC | 3 cut(s) | 510, 661, 1150 |
| AsuC2I | CCSGG | 1 cut(s) | 160 |
| AsuHPI | GGTGA | 3 cut(s) | 1003, 1301, 1379 |
| AvaI | CYCGRG | 1 cut(s) | 795 |
| AvaII | GGWCC | 2 cut(s) | 510, 1150 |
| BbsI | GAAGAC | 1 cut(s) | 866 |
| BbvCI | CCTCAGC | 1 cut(s) | 854 |
| BbvI | GCAGC | 4 cut(s) | 593, 958, 1004, 1032 |
| BccI | CCATC | 3 cut(s) | 22, 76, 1265 |
| BciT130I | CCWGG | 2 cut(s) | 724, 985 |
| BcnI | CCSGG | 1 cut(s) | 160 |
| BcoDI | GTCTC | 1 cut(s) | 1365 |
| BfaI | CTAG | 3 cut(s) | 405, 828, 1179 |
| BfmI | CTRYAG | 1 cut(s) | 1018 |
| BglII | AGATCT | 1 cut(s) | 1246 |
| BisI | GCNGC | 4 cut(s) | 582, 972, 1018, 1021 |
| BlsI | GCNGC | 4 cut(s) | 583, 973, 1019, 1022 |
| Bme1390I | CCNGG | 3 cut(s) | 160, 724, 985 |
| Bme18I | GGWCC | 2 cut(s) | 510, 1150 |
| BmeT110I | CYCGRG | 1 cut(s) | 795 |
| BmgT120I | GGNCC | 3 cut(s) | 510, 661, 1150 |
| BmiI | GGNNCC | 5 cut(s) | 721, 792, 1152, 1280, 1512 |
| BmrFI | CCNGG | 3 cut(s) | 160, 724, 985 |
| BmrI | ACTGGG | 2 cut(s) | 443, 1169 |
| BmsI | GCATC | 2 cut(s) | 705, 1159 |
| BmuI | ACTGGG | 2 cut(s) | 443, 1169 |
| BpiI | GAAGAC | 1 cut(s) | 866 |
| BpmI | CTGGAG | 2 cut(s) | 570, 923 |
| Bpu10I | CCTNAGC | 1 cut(s) | 854 |
| BpuEI | CTTGAG | 2 cut(s) | 1163, 1347 |
| BpuMI | CCSGG | 1 cut(s) | 160 |
| Bsa29I | ATCGAT | 1 cut(s) | 1427 |
| BsaAI | YACGTR | 1 cut(s) | 68 |
| BsaJI | CCNNGG | 2 cut(s) | 24, 983 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 933, 963 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1100, 1159, 1160 |
| Bse1I | ACTGG | 7 cut(s) | 438, 553, 753, 823, 871, 906, 1164 |
| Bse3DI | GCAATG | 5 cut(s) | 225, 583, 1090, 1326, 1415 |
| BseBI | CCWGG | 2 cut(s) | 724, 985 |
| BseCI | ATCGAT | 1 cut(s) | 1427 |
| BseDI | CCNNGG | 2 cut(s) | 24, 983 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1100, 1159, 1160 |
| BseMI | GCAATG | 5 cut(s) | 225, 583, 1090, 1326, 1415 |
| BseMII | CTCAG | 1 cut(s) | 845 |
| BseNI | ACTGG | 7 cut(s) | 438, 553, 753, 823, 871, 906, 1164 |
| BseXI | GCAGC | 4 cut(s) | 593, 958, 1004, 1032 |
| BshFI | GGCC | 2 cut(s) | 227, 662 |
| BshVI | ATCGAT | 1 cut(s) | 1427 |
| BsiHKCI | CYCGRG | 1 cut(s) | 795 |
| BsiSI | CCGG | 1 cut(s) | 159 |
| BslFI | GGGAC | 2 cut(s) | 1100, 1136 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1100, 1159, 1160 |
| BsmAI | GTCTC | 1 cut(s) | 1365 |
| BsmFI | GGGAC | 2 cut(s) | 1100, 1136 |
| BsnI | GGCC | 2 cut(s) | 227, 662 |
| BsoBI | CYCGRG | 1 cut(s) | 795 |
| Bsp1407I | TGTACA | 1 cut(s) | 623 |
| Bsp143I | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| Bsp19I | CCATGG | 1 cut(s) | 24 |
| BspACI | CCGC | 2 cut(s) | 513, 1571 |
| BspANI | GGCC | 2 cut(s) | 227, 662 |
| BspCNI | CTCAG | 1 cut(s) | 846 |
| BspDI | ATCGAT | 1 cut(s) | 1427 |
| BspHI | TCATGA | 1 cut(s) | 1542 |
| BspLI | GGNNCC | 5 cut(s) | 721, 792, 1152, 1280, 1512 |
| BspMAI | CTGCAG | 1 cut(s) | 1022 |
| BspPI | GGATC | 3 cut(s) | 199, 715, 1545 |
| BsrDI | GCAATG | 5 cut(s) | 225, 583, 1090, 1326, 1415 |
| BsrGI | TGTACA | 1 cut(s) | 623 |
| BsrI | ACTGG | 7 cut(s) | 438, 553, 753, 823, 871, 906, 1164 |
| BssECI | CCNNGG | 2 cut(s) | 24, 983 |
| BssMI | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| BssNAI | GTATAC | 1 cut(s) | 534 |
| BssT1I | CCWWGG | 1 cut(s) | 24 |
| Bst1107I | GTATAC | 1 cut(s) | 534 |
| Bst2UI | CCWGG | 2 cut(s) | 724, 985 |
| Bst4CI | ACNGT | 5 cut(s) | 109, 293, 362, 1108, 1359 |
| Bst6I | CTCTTC | 1 cut(s) | 940 |
| BstAUI | TGTACA | 1 cut(s) | 623 |
| BstBAI | YACGTR | 1 cut(s) | 68 |
| BstDEI | CTNAG | 3 cut(s) | 50, 854, 1205 |
| BstDSI | CCRYGG | 1 cut(s) | 24 |
| BstEII | GGTNACC | 2 cut(s) | 1009, 1229 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstHHI | GCGC | 1 cut(s) | 976 |
| BstKTI | GATC | 5 cut(s) | 194, 710, 808, 1249, 1540 |
| BstMAI | GTCTC | 1 cut(s) | 1365 |
| BstMBI | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 224, 1062, 1395 |
| BstNI | CCWGG | 2 cut(s) | 724, 985 |
| BstNSI | RCATGY | 1 cut(s) | 992 |
| BstPI | GGTNACC | 2 cut(s) | 1009, 1229 |
| BstSCI | CCNGG | 3 cut(s) | 158, 722, 983 |
| BstSFI | CTRYAG | 1 cut(s) | 1018 |
| BstV1I | GCAGC | 4 cut(s) | 593, 958, 1004, 1032 |
| BstV2I | GAAGAC | 1 cut(s) | 866 |
| BstX2I | RGATCY | 3 cut(s) | 707, 1246, 1537 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 991 |
| BstYI | RGATCY | 3 cut(s) | 707, 1246, 1537 |
| BstZ17I | GTATAC | 1 cut(s) | 534 |
| Bsu15I | ATCGAT | 1 cut(s) | 1427 |
| BsuRI | GGCC | 2 cut(s) | 227, 662 |
| BsuTUI | ATCGAT | 1 cut(s) | 1427 |
| BtgI | CCRYGG | 1 cut(s) | 24 |
| BtgZI | GCGATG | 1 cut(s) | 747 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 2 cut(s) | 816, 1251 |
| CciI | TCATGA | 1 cut(s) | 1542 |
| CfoI | GCGC | 1 cut(s) | 976 |
| Cfr13I | GGNCC | 3 cut(s) | 510, 661, 1150 |
| ClaI | ATCGAT | 1 cut(s) | 1427 |
| Csp6I | GTAC | 2 cut(s) | 65, 624 |
| CviAII | CATG | 6 cut(s) | 25, 239, 989, 1188, 1439, 1543 |
| CviQI | GTAC | 2 cut(s) | 65, 624 |
| DdeI | CTNAG | 3 cut(s) | 50, 854, 1205 |
| DpnI | GATC | 5 cut(s) | 193, 709, 807, 1248, 1539 |
| DpnII | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| DraI | TTTAAA | 2 cut(s) | 375, 1354 |
| Eam1104I | CTCTTC | 1 cut(s) | 940 |
| EarI | CTCTTC | 1 cut(s) | 940 |
| Eco130I | CCWWGG | 1 cut(s) | 24 |
| Eco147I | AGGCCT | 1 cut(s) | 227 |
| Eco47I | GGWCC | 2 cut(s) | 510, 1150 |
| Eco57I | CTGAAG | 3 cut(s) | 318, 743, 1275 |
| Eco88I | CYCGRG | 1 cut(s) | 795 |
| Eco91I | GGTNACC | 2 cut(s) | 1009, 1229 |
| EcoO65I | GGTNACC | 2 cut(s) | 1009, 1229 |
| EcoRI | GAATTC | 1 cut(s) | 461 |
| EcoRII | CCWGG | 2 cut(s) | 722, 983 |
| EcoT14I | CCWWGG | 1 cut(s) | 24 |
| EcoT22I | ATGCAT | 2 cut(s) | 372, 880 |
| ErhI | CCWWGG | 1 cut(s) | 24 |
| FaeI | CATG | 6 cut(s) | 28, 242, 992, 1191, 1442, 1546 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1125, 1157, 1248, 1280 |
| FaqI | GGGAC | 2 cut(s) | 1100, 1136 |
| FatI | CATG | 6 cut(s) | 24, 238, 988, 1187, 1438, 1542 |
| FauNDI | CATATG | 1 cut(s) | 250 |
| FblI | GTMKAC | 1 cut(s) | 533 |
| Fnu4HI | GCNGC | 4 cut(s) | 582, 972, 1018, 1021 |
| Fsp4HI | GCNGC | 4 cut(s) | 582, 972, 1018, 1021 |
| FspBI | CTAG | 3 cut(s) | 405, 828, 1179 |
| GlaI | GCGC | 1 cut(s) | 975 |
| GluI | GCNGC | 4 cut(s) | 582, 972, 1018, 1021 |
| GsuI | CTGGAG | 2 cut(s) | 570, 923 |
| HaeIII | GGCC | 2 cut(s) | 227, 662 |
| HapII | CCGG | 1 cut(s) | 159 |
| HhaI | GCGC | 1 cut(s) | 976 |
| Hin1II | CATG | 6 cut(s) | 28, 242, 992, 1191, 1442, 1546 |
| Hin6I | GCGC | 1 cut(s) | 974 |
| HinP1I | GCGC | 1 cut(s) | 974 |
| HincII | GTYRAC | 1 cut(s) | 606 |
| HindII | GTYRAC | 1 cut(s) | 606 |
| HindIII | AAGCTT | 1 cut(s) | 908 |
| HinfI | GANTC | 4 cut(s) | 635, 1145, 1454, 1546 |
| HpaII | CCGG | 1 cut(s) | 159 |
| HphI | GGTGA | 3 cut(s) | 1003, 1301, 1379 |
| Hpy166II | GTNNAC | 4 cut(s) | 65, 491, 534, 606 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 484, 595 |
| Hpy188III | TCNNGA | 4 cut(s) | 320, 685, 761, 1543 |
| Hpy8I | GTNNAC | 4 cut(s) | 65, 491, 534, 606 |
| HpyAV | CCTTC | 3 cut(s) | 362, 412, 767 |
| HpyCH4III | ACNGT | 5 cut(s) | 109, 293, 362, 1108, 1359 |
| HpyCH4IV | ACGT | 2 cut(s) | 67, 1073 |
| HpyCH4V | TGCA | 9 cut(s) | 218, 370, 522, 581, 696, 878, 1020, 1172, 1408 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 224, 1062, 1395 |
| HpyF3I | CTNAG | 3 cut(s) | 50, 854, 1205 |
| HpySE526I | ACGT | 2 cut(s) | 67, 1073 |
| Hsp92II | CATG | 6 cut(s) | 28, 242, 992, 1191, 1442, 1546 |
| HspAI | GCGC | 1 cut(s) | 974 |
| Kzo9I | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| LmnI | GCTCC | 2 cut(s) | 725, 1316 |
| Lsp1109I | GCAGC | 4 cut(s) | 593, 958, 1004, 1032 |
| LweI | GCATC | 2 cut(s) | 705, 1159 |
| MaeI | CTAG | 3 cut(s) | 405, 828, 1179 |
| MaeII | ACGT | 2 cut(s) | 67, 1073 |
| MaeIII | GTNAC | 3 cut(s) | 230, 1009, 1229 |
| MalI | GATC | 5 cut(s) | 193, 709, 807, 1248, 1539 |
| MboI | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| MboII | GAAGA | 7 cut(s) | 440, 641, 644, 702, 871, 957, 1268 |
| MfeI | CAATTG | 1 cut(s) | 381 |
| MflI | RGATCY | 3 cut(s) | 707, 1246, 1537 |
| MluCI | AATT | 7 cut(s) | 196, 381, 461, 478, 640, 998, 1574 |
| MlyI | GAGTC | 3 cut(s) | 1154, 1463, 1540 |
| MmeI | TCCRAC | 1 cut(s) | 1574 |
| Mph1103I | ATGCAT | 2 cut(s) | 372, 880 |
| MroXI | GAANNNNTTC | 2 cut(s) | 465, 1448 |
| MseI | TTAA | 5 cut(s) | 374, 587, 918, 1353, 1493 |
| MslI | CAYNNNNRTG | 3 cut(s) | 527, 669, 1287 |
| MspA1I | CMGCKG | 2 cut(s) | 515, 1017 |
| MspI | CCGG | 1 cut(s) | 159 |
| MspR9I | CCNGG | 3 cut(s) | 160, 724, 985 |
| MunI | CAATTG | 1 cut(s) | 381 |
| MvaI | CCWGG | 2 cut(s) | 724, 985 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 224, 1062, 1395 |
| NciI | CCSGG | 1 cut(s) | 160 |
| NcoI | CCATGG | 1 cut(s) | 24 |
| NdeI | CATATG | 1 cut(s) | 250 |
| NdeII | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| NlaIII | CATG | 6 cut(s) | 28, 242, 992, 1191, 1442, 1546 |
| NlaIV | GGNNCC | 5 cut(s) | 721, 792, 1152, 1280, 1512 |
| NmuCI | GTSAC | 2 cut(s) | 230, 1009 |
| NsiI | ATGCAT | 2 cut(s) | 372, 880 |
| NspI | RCATGY | 1 cut(s) | 992 |
| PaeR7I | CTCGAG | 1 cut(s) | 795 |
| PagI | TCATGA | 1 cut(s) | 1542 |
| PceI | AGGCCT | 1 cut(s) | 227 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 653 |
| PdmI | GAANNNNTTC | 2 cut(s) | 465, 1448 |
| PfeI | GAWTC | 1 cut(s) | 635 |
| PkrI | GCNGC | 4 cut(s) | 583, 973, 1019, 1022 |
| PleI | GAGTC | 3 cut(s) | 1153, 1462, 1540 |
| PpsI | GAGTC | 3 cut(s) | 1153, 1462, 1540 |
| Ppu21I | YACGTR | 1 cut(s) | 68 |
| PshBI | ATTAAT | 1 cut(s) | 587 |
| Psp6I | CCWGG | 2 cut(s) | 722, 983 |
| PspEI | GGTNACC | 2 cut(s) | 1009, 1229 |
| PspGI | CCWGG | 2 cut(s) | 722, 983 |
| PspN4I | GGNNCC | 5 cut(s) | 721, 792, 1152, 1280, 1512 |
| PspPI | GGNCC | 3 cut(s) | 510, 661, 1150 |
| PspXI | VCTCGAGB | 1 cut(s) | 795 |
| PstI | CTGCAG | 1 cut(s) | 1022 |
| PsuI | RGATCY | 3 cut(s) | 707, 1246, 1537 |
| PvuII | CAGCTG | 1 cut(s) | 1017 |
| RsaI | GTAC | 2 cut(s) | 66, 625 |
| RsaNI | GTAC | 2 cut(s) | 65, 624 |
| RseI | CAYNNNNRTG | 3 cut(s) | 527, 669, 1287 |
| SaqAI | TTAA | 5 cut(s) | 374, 587, 918, 1353, 1493 |
| SatI | GCNGC | 4 cut(s) | 582, 972, 1018, 1021 |
| Sau3AI | GATC | 5 cut(s) | 191, 707, 805, 1246, 1537 |
| Sau96I | GGNCC | 3 cut(s) | 510, 661, 1150 |
| SchI | GAGTC | 3 cut(s) | 1154, 1463, 1540 |
| ScrFI | CCNGG | 3 cut(s) | 160, 724, 985 |
| SfaNI | GCATC | 2 cut(s) | 705, 1159 |
| SfcI | CTRYAG | 1 cut(s) | 1018 |
| Sfr274I | CTCGAG | 1 cut(s) | 795 |
| SinI | GGWCC | 2 cut(s) | 510, 1150 |
| SlaI | CTCGAG | 1 cut(s) | 795 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 527, 669, 1287 |
| SmlI | CTYRAG | 3 cut(s) | 795, 1142, 1362 |
| SmoI | CTYRAG | 3 cut(s) | 795, 1142, 1362 |
| Sse9I | AATT | 7 cut(s) | 196, 381, 461, 478, 640, 998, 1574 |
| SseBI | AGGCCT | 1 cut(s) | 227 |
| SsiI | CCGC | 2 cut(s) | 513, 1571 |
| SspI | AATATT | 1 cut(s) | 1586 |
| SspMI | CTAG | 3 cut(s) | 405, 828, 1179 |
| StuI | AGGCCT | 1 cut(s) | 227 |
| StyD4I | CCNGG | 3 cut(s) | 158, 722, 983 |
| StyI | CCWWGG | 1 cut(s) | 24 |
| TaaI | ACNGT | 5 cut(s) | 109, 293, 362, 1108, 1359 |
| TaiI | ACGT | 2 cut(s) | 70, 1076 |
| TaqI | TCGA | 5 cut(s) | 684, 796, 1427, 1452, 1477 |
| TaqII | GACCGA | 1 cut(s) | 1138 |
| TasI | AATT | 7 cut(s) | 196, 381, 461, 478, 640, 998, 1574 |
| TatI | WGTACW | 1 cut(s) | 623 |
| TfiI | GAWTC | 1 cut(s) | 635 |
| Tru1I | TTAA | 5 cut(s) | 374, 587, 918, 1353, 1493 |
| Tru9I | TTAA | 5 cut(s) | 374, 587, 918, 1353, 1493 |
| TscAI | CASTG | 2 cut(s) | 823, 1258 |
| TseFI | GTSAC | 2 cut(s) | 230, 1009 |
| TseI | GCWGC | 4 cut(s) | 581, 971, 1017, 1020 |
| Tsp45I | GTSAC | 2 cut(s) | 230, 1009 |
| TspDTI | ATGAA | 5 cut(s) | 271, 828, 1337, 1427, 1493 |
| TspRI | CASTG | 2 cut(s) | 823, 1258 |
| VpaK11BI | GGWCC | 2 cut(s) | 510, 1150 |
| VspI | ATTAAT | 1 cut(s) | 587 |
| XapI | RAATTY | 5 cut(s) | 196, 461, 478, 640, 998 |
| XceI | RCATGY | 1 cut(s) | 992 |
| XhoI | CTCGAG | 1 cut(s) | 795 |
| XmiI | GTMKAC | 1 cut(s) | 533 |
| XmnI | GAANNNNTTC | 2 cut(s) | 465, 1448 |
| XspI | CTAG | 3 cut(s) | 405, 828, 1179 |
| Zsp2I | ATGCAT | 2 cut(s) | 372, 880 |