Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000225

Physical Location & Seq

Genomic Coordinates Reverse (-)

16264992 .. 16267490

Gene Structure 2499 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ23446

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGCATCTACAAGGGATCTTCAATAGGCTTCTGGATGTCAGGTTTTTACTGGATGACCTTCAGGAGCTAAAGCCTACTATGTTTTGTGGTGTTCCTCGAGTTTATGATCGTATATGCACTGATATTGCTAGTAGAGTTTCATCTGGTGGTGTGCTGAGGAAGACCCTTTTCCAGTATGCATATAACTACAAGTTGGCAAATCTGGAGAAGGGTCTACCACAAGAAAAAGTGGCACTTCTCTTGGACAAGCTTGTGTTTAACAAGATAAAACAAGCATTAGGAGGACGAGTTCGTATAATGTTGTCTGGTGCTGCGCCTTTGCCCGGGCTGTTGAGGAATTTTCTAGGGTCACCAGCTGCAGCACTTTATCACAAGGATATGGCCTTACTGATAGCTGTGCTTGAGTCGGTCCCAGAACTGGGATATGATGCACTTTCTAGTGTGCCACGTGGAGAGATTTGCCTCAGAGGAAAAACCTTGTTTTCTGGTTACCACAAGTGGCAAGATCTCACTGATGAAGTCCTTATTGATGGGCGGTTCCATACAGGTGATATTGGAGAACGGCAGCCAAATGGAGCAATGAAAGTTATAGACAGGAAAAAGAACATATTTAAACTGTCTCAAGTTGAATATGTTGCTGTGGAAAGCATTGAAAGCAAATACTTGCAATGCCCCCTTATCACATTGATTTGGGTTTATGGGAACAGCTTCGAGTCATTTCTTGTTGCTGTGGTTGTTCCTGAGAGAAAGGCCTTGGAGGACTGGGCAGCTGAGCATCATTTGACTGATGACTACAAATCATTGTGTCAAAATATGAAGGCAAGAAAATACATTTTGGATGAGCTCAATAGTATGGGTCCGAAACAGCAACTTCGAGGGTTTGAGTTGTTAAAAGCAGTTCATTTGGAACCAAACCCCTTTGACATAGAGAGGGATCTCATGACTCCAACTTTCAAACTGAAAAGACCCCAATTACTCAAATATTACAAGGACCGAGTTGAAAAACTTTATAGTGAAGCAAAGGGTGGAAAGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010143 GO:0010311 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0022622 GO:0030054 GO:0031957 GO:0032501 GO:0032502 GO:0032787 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0090696 GO:0090697 GO:0090698 GO:0098542 GO:0099402 GO:1901576 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

345

Amino Acids

39.27

Weight (kDa)

9.04

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	8 - 109	3.9e-06	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49430 AT1G49430
fragaria_vesca	FvH4_2g07450 FvH4_2g07450 FvH4_2g07450 FvH4_6g05950 FvH4_6g05960
malus_domestica	MD05G1070800.v1.1 MD10G1085200.v1.1 MD10G1085400.v1.1
prunus_persica	Prupe.8G108400_v2.0.a1 Prupe.8G108600_v2.0.a1 Prupe.8G108900_v2.0.a1
pyrus_communis	pycom10g06680
rosa_chinensis	RchiOBHm_Chr0c38g0502991 RchiOBHm_Chr0c38g0503001 RchiOBHm_Chr0c38g0503011 RchiOBHm_Chr0c38g0503031 RchiOBHm_Chr1g0351481 RchiOBHm_Chr6g0261071 RchiOBHm_Chr6g0261081 RchiOBHm_Chr6g0261101 RchiOBHm_Chr6g0261171 RchiOBHm_Chr6g0261181 RchiOBHm_Chr6g0261201 RchiOBHm_Chr6g0261211 RchiOBHm_Chr6g0261271 RchiOBHm_Chr6g0261291 RchiOBHm_Chr6g0261301 RchiOBHm_Chr6g0261311 RchiOBHm_Chr6g0261431 RchiOBHm_Chr6g0261521 RchiOBHm_Chr6g0261591 RchiOBHm_Chr6g0261601 RchiOBHm_Chr6g0261611 RchiOBHm_Chr6g0261621 RchiOBHm_Chr6g0261631 RchiOBHm_Chr6g0261651 RchiOBHm_Chr6g0261671 RchiOBHm_Chr6g0261761 RchiOBHm_Chr6g0261791 RchiOBHm_Chr6g0261801 RchiOBHm_Chr6g0261891 RchiOBHm_Chr6g0261911 RchiOBHm_Chr6g0261921 RchiOBHm_Chr6g0261931 RchiOBHm_Chr6g0261951 RchiOBHm_Chr6g0261961 RchiOBHm_Chr6g0261981 RchiOBHm_Chr6g0262641 RchiOBHm_Chr6g0262661 RchiOBHm_Chr6g0262711 RchiOBHm_Chr6g0262721 RchiOBHm_Chr6g0262801 RchiOBHm_Chr6g0262811 RchiOBHm_Chr6g0262821 RchiOBHm_Chr6g0262831 RchiOBHm_Chr6g0262871 RchiOBHm_Chr6g0262881 RchiOBHm_Chr6g0267811
rosa_laevigata	RLG00000014207 RLG00000014410 RLG00000014461 RLG00000014462 RLG00000014463 RLG00000030683
rosa_multiflora	Rmu_co8313283.1_g000002 Rmu_sc0000596.1_g000052 Rmu_sc0001833.1_g000009 Rmu_sc0003487.1_g000003 Rmu_sc0003487.1_g000007 Rmu_sc0004766.1_g000001 Rmu_sc0005237.1_g000021 Rmu_sc0006655.1_g000001 Rmu_sc0015236.1_g000003 Rmu_sc0015236.1_g000004 Rmu_sc0028652.1_g000010 Rmu_sc0031142.1_g000001 Rmu_sc0036063.1_g000001 Rmu_ssc0000359.1_g000047 Rmu_ssc0000359.1_g000054 Rmu_ssc0000359.1_g000058 Rmu_ssc0000359.1_g000060
rosa_roxburghii	Rroxscaffold_175G00432240 Rroxscaffold_177G00434140 Rroxscaffold_177G00434220 Rroxscaffold_2G00103180 Rroxscaffold_2G00103450 Rroxscaffold_4G00314540 Rroxscaffold_7G00202920 Rroxscaffold_7G00202940 Rroxscaffold_7G00207640 Rroxscaffold_7G00207650 Rroxscaffold_7G00207670 Rroxscaffold_7G00207690 Rroxscaffold_7G00207700 Rroxscaffold_7G00207720
rosa_rugosa	Rorug05G0594700 Rorug05G0594900 Rorug06G0013300 Rorug07G0072100
rosa_samantha	Rh4AG177500 Rh5AG318000 Rh6AG114200 Rh6AG120600 Rh6AG137000 Rh6AG137100 Rh6AG161100 Rh6BG107900 Rh6BG108000 Rh6BG108200 Rh6BG108300 Rh6BG108400 Rh6BG113800 Rh6BG134400 Rh6BG134500 Rh6BG134600 Rh6BG134700 Rh6BG134900 Rh6BG135100 Rh6BG135300 Rh6BG135400 Rh6CG105000 Rh6CG105100 Rh6CG105500 Rh6CG105600 Rh6CG105700 Rh6CG105800 Rh6CG111800 Rh6CG132500 Rh6CG132900 Rh6CG133000 Rh6CG133200 Rh6CG133400 Rh6CG133500 Rh6CG133600 Rh6CG133700 Rh6CG133800 Rh6CG152600 Rh6CG159000 Rh6DG120200
rosa_wichuraiana	Rw0G012740 Rw6G002860 Rw6G009790 Rw6G010330

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	214
AciI	CCGC	1 cut(s)	535
AclWI	GGATC	2 cut(s)	23, 942
AcsI	RAATTY	1 cut(s)	337
AcuI	CTGAAG	1 cut(s)	44
AcvI	CACGTG	1 cut(s)	449
AfiI	CCNNNNNNNGG	3 cut(s)	323, 418, 419
AgsI	TTSAA	5 cut(s)	22, 629, 653, 955, 1001
AloI	GAACNNNNNNTCC	2 cut(s)	273, 305
AluBI	AGCT	7 cut(s)	67, 250, 356, 395, 708, 770, 844
AluI	AGCT	7 cut(s)	67, 250, 356, 395, 708, 770, 844
Alw21I	GWGCWC	1 cut(s)	846
Alw26I	GTCTC	1 cut(s)	624
AlwI	GGATC	2 cut(s)	23, 942
Ama87I	CYCGRG	2 cut(s)	96, 323
AoxI	GGCC	2 cut(s)	381, 750
ApeKI	GCWGC	5 cut(s)	311, 356, 359, 565, 767
ApoI	RAATTY	1 cut(s)	337
Asp700I	GAANNNNTTC	1 cut(s)	707
AspLEI	GCGC	1 cut(s)	316
AspS9I	GGNCC	3 cut(s)	409, 857, 991
AsuC2I	CCSGG	2 cut(s)	324, 325
AsuHPI	GGTGA	2 cut(s)	342, 560
AvaI	CYCGRG	2 cut(s)	96, 323
AvaII	GGWCC	3 cut(s)	409, 857, 991
BanII	GRGCYC	1 cut(s)	846
BbrPI	CACGTG	1 cut(s)	449
BbsI	GAAGAC	1 cut(s)	167
Bbv12I	GWGCWC	1 cut(s)	846
BbvCI	CCTCAGC	1 cut(s)	155
BbvI	GCAGC	5 cut(s)	298, 343, 371, 577, 779
BccI	CCATC	1 cut(s)	524
BceAI	ACGGC	1 cut(s)	578
BcnI	CCSGG	2 cut(s)	324, 325
BcoDI	GTCTC	1 cut(s)	624
BfaI	CTAG	3 cut(s)	129, 344, 438
BfmI	CTRYAG	1 cut(s)	357
BglII	AGATCT	1 cut(s)	505
BisI	GCNGC	5 cut(s)	312, 357, 360, 566, 768
BlpI	GCTNAGC	1 cut(s)	771
BlsI	GCNGC	5 cut(s)	313, 358, 361, 567, 769
Bme1390I	CCNGG	2 cut(s)	324, 325
Bme18I	GGWCC	3 cut(s)	409, 857, 991
BmeT110I	CYCGRG	2 cut(s)	96, 323
BmgT120I	GGNCC	3 cut(s)	409, 857, 991
BmiI	GGNNCC	4 cut(s)	411, 539, 858, 909
BmrFI	CCNGG	2 cut(s)	324, 325
BmrI	ACTGGG	2 cut(s)	428, 772
BmsI	GCATC	3 cut(s)	13, 418, 784
BmuI	ACTGGG	2 cut(s)	428, 772
BpiI	GAAGAC	1 cut(s)	167
BpmI	CTGGAG	1 cut(s)	224
Bpu10I	CCTNAGC	1 cut(s)	155
Bpu1102I	GCTNAGC	1 cut(s)	771
BpuEI	CTTGAG	2 cut(s)	422, 606
BpuMI	CCSGG	2 cut(s)	324, 325
BsaAI	YACGTR	1 cut(s)	449
BsaJI	CCNNGG	2 cut(s)	323, 753
BsaXI	ACNNNNNCTCC	2 cut(s)	273, 303
Bsc4I	CCNNNNNNNGG	3 cut(s)	323, 418, 419
Bse1I	ACTGG	4 cut(s)	54, 172, 423, 767
Bse3DI	GCAATG	2 cut(s)	585, 674
BseDI	CCNNGG	2 cut(s)	323, 753
BseGI	GGATG	3 cut(s)	40, 58, 844
BseLI	CCNNNNNNNGG	3 cut(s)	323, 418, 419
BseMI	GCAATG	2 cut(s)	585, 674
BseMII	CTCAG	4 cut(s)	146, 478, 732, 762
BseNI	ACTGG	4 cut(s)	54, 172, 423, 767
BseXI	GCAGC	5 cut(s)	298, 343, 371, 577, 779
BshFI	GGCC	2 cut(s)	383, 752
BsiHKAI	GWGCWC	1 cut(s)	846
BsiHKCI	CYCGRG	2 cut(s)	96, 323
BsiSI	CCGG	1 cut(s)	324
BslFI	GGGAC	1 cut(s)	395
BslI	CCNNNNNNNGG	3 cut(s)	323, 418, 419
BsmAI	GTCTC	1 cut(s)	624
BsmFI	GGGAC	1 cut(s)	395
BsnI	GGCC	2 cut(s)	383, 752
BsoBI	CYCGRG	2 cut(s)	96, 323
Bsp1286I	GDGCHC	1 cut(s)	846
Bsp143I	GATC	4 cut(s)	15, 106, 505, 934
Bsp1720I	GCTNAGC	1 cut(s)	771
BspACI	CCGC	1 cut(s)	535
BspANI	GGCC	2 cut(s)	383, 752
BspCNI	CTCAG	4 cut(s)	147, 477, 733, 763
BspHI	TCATGA	1 cut(s)	939
BspLI	GGNNCC	4 cut(s)	411, 539, 858, 909
BspMAI	CTGCAG	1 cut(s)	361
BspPI	GGATC	2 cut(s)	23, 942
BsrDI	GCAATG	2 cut(s)	585, 674
BsrI	ACTGG	4 cut(s)	54, 172, 423, 767
BssECI	CCNNGG	2 cut(s)	323, 753
BssMI	GATC	4 cut(s)	15, 106, 505, 934
BssT1I	CCWWGG	1 cut(s)	753
Bst4CI	ACNGT	1 cut(s)	618
BstBAI	YACGTR	1 cut(s)	449
BstDEI	CTNAG	4 cut(s)	155, 464, 741, 771
BstEII	GGTNACC	2 cut(s)	348, 488
BstF5I	GGATG	3 cut(s)	40, 58, 844
BstHHI	GCGC	1 cut(s)	316
BstKTI	GATC	4 cut(s)	18, 109, 508, 937
BstMAI	GTCTC	1 cut(s)	624
BstMBI	GATC	4 cut(s)	15, 106, 505, 934
BstMWI	GCNNNNNNNGC	1 cut(s)	654
BstPI	GGTNACC	2 cut(s)	348, 488
BstSCI	CCNGG	2 cut(s)	322, 323
BstSFI	CTRYAG	1 cut(s)	357
BstV1I	GCAGC	5 cut(s)	298, 343, 371, 577, 779
BstV2I	GAAGAC	1 cut(s)	167
BstX2I	RGATCY	3 cut(s)	15, 505, 934
BstYI	RGATCY	3 cut(s)	15, 505, 934
BsuRI	GGCC	2 cut(s)	383, 752
BtsCI	GGATG	3 cut(s)	40, 58, 844
BtsIMutI	CAGTG	2 cut(s)	117, 510
CciI	TCATGA	1 cut(s)	939
CfoI	GCGC	1 cut(s)	316
Cfr13I	GGNCC	3 cut(s)	409, 857, 991
Cfr9I	CCCGGG	1 cut(s)	323
CviAII	CATG	1 cut(s)	940
DdeI	CTNAG	4 cut(s)	155, 464, 741, 771
DpnI	GATC	4 cut(s)	17, 108, 507, 936
DpnII	GATC	4 cut(s)	15, 106, 505, 934
DraI	TTTAAA	1 cut(s)	613
Ecl136II	GAGCTC	1 cut(s)	844
Eco130I	CCWWGG	1 cut(s)	753
Eco147I	AGGCCT	1 cut(s)	752
Eco24I	GRGCYC	1 cut(s)	846
Eco47I	GGWCC	3 cut(s)	409, 857, 991
Eco53kI	GAGCTC	1 cut(s)	844
Eco57I	CTGAAG	1 cut(s)	44
Eco72I	CACGTG	1 cut(s)	449
Eco88I	CYCGRG	2 cut(s)	96, 323
Eco91I	GGTNACC	2 cut(s)	348, 488
EcoICRI	GAGCTC	1 cut(s)	844
EcoO65I	GGTNACC	2 cut(s)	348, 488
EcoT14I	CCWWGG	1 cut(s)	753
EcoT22I	ATGCAT	2 cut(s)	6, 181
EcoT38I	GRGCYC	1 cut(s)	846
ErhI	CCWWGG	1 cut(s)	753
FaeI	CATG	1 cut(s)	943
FalI	AAGNNNNNCTT	2 cut(s)	219, 251
FaqI	GGGAC	1 cut(s)	395
FatI	CATG	1 cut(s)	939
FblI	GTMKAC	1 cut(s)	214
Fnu4HI	GCNGC	5 cut(s)	312, 357, 360, 566, 768
FokI	GGATG	3 cut(s)	47, 65, 851
FriOI	GRGCYC	1 cut(s)	846
Fsp4HI	GCNGC	5 cut(s)	312, 357, 360, 566, 768
FspBI	CTAG	3 cut(s)	129, 344, 438
GlaI	GCGC	1 cut(s)	315
GluI	GCNGC	5 cut(s)	312, 357, 360, 566, 768
GsuI	CTGGAG	1 cut(s)	224
HaeIII	GGCC	2 cut(s)	383, 752
HapII	CCGG	1 cut(s)	324
HhaI	GCGC	1 cut(s)	316
Hin1II	CATG	1 cut(s)	943
Hin6I	GCGC	1 cut(s)	314
HinP1I	GCGC	1 cut(s)	314
HindIII	AAGCTT	1 cut(s)	248
HinfI	GANTC	3 cut(s)	404, 713, 943
HpaII	CCGG	1 cut(s)	324
HphI	GGTGA	2 cut(s)	342, 560
Hpy166II	GTNNAC	1 cut(s)	215
Hpy188I	TCNGA	2 cut(s)	467, 861
Hpy188III	TCNNGA	5 cut(s)	32, 62, 203, 740, 940
Hpy8I	GTNNAC	1 cut(s)	215
HpyAV	CCTTC	3 cut(s)	68, 202, 811
HpyCH4III	ACNGT	1 cut(s)	618
HpyCH4IV	ACGT	1 cut(s)	448
HpyCH4V	TGCA	6 cut(s)	4, 117, 179, 359, 431, 667
HpyF10VI	GCNNNNNNNGC	1 cut(s)	654
HpyF3I	CTNAG	4 cut(s)	155, 464, 741, 771
HpySE526I	ACGT	1 cut(s)	448
Hsp92II	CATG	1 cut(s)	943
HspAI	GCGC	1 cut(s)	314
Kzo9I	GATC	4 cut(s)	15, 106, 505, 934
LmnI	GCTCC	2 cut(s)	64, 575
Lsp1109I	GCAGC	5 cut(s)	298, 343, 371, 577, 779
LweI	GCATC	3 cut(s)	13, 418, 784
MaeI	CTAG	3 cut(s)	129, 344, 438
MaeII	ACGT	1 cut(s)	448
MaeIII	GTNAC	2 cut(s)	348, 488
MalI	GATC	4 cut(s)	17, 108, 507, 936
MboI	GATC	4 cut(s)	15, 106, 505, 934
MboII	GAAGA	2 cut(s)	10, 172
MflI	RGATCY	3 cut(s)	15, 505, 934
MhlI	GDGCHC	1 cut(s)	846
MluCI	AATT	2 cut(s)	337, 971
MlyI	GAGTC	3 cut(s)	413, 722, 937
MmeI	TCCRAC	1 cut(s)	971
MnlI	CCTC	9 cut(s)	105, 150, 275, 327, 461, 473, 751, 869, 924
Mph1103I	ATGCAT	2 cut(s)	6, 181
MroXI	GAANNNNTTC	1 cut(s)	707
MseI	TTAA	3 cut(s)	258, 612, 890
MslI	CAYNNNNRTG	1 cut(s)	546
MspA1I	CMGCKG	2 cut(s)	356, 770
MspI	CCGG	1 cut(s)	324
MspR9I	CCNGG	2 cut(s)	324, 325
MwoI	GCNNNNNNNGC	1 cut(s)	654
NciI	CCSGG	2 cut(s)	324, 325
NdeII	GATC	4 cut(s)	15, 106, 505, 934
NlaIII	CATG	1 cut(s)	943
NlaIV	GGNNCC	4 cut(s)	411, 539, 858, 909
NmuCI	GTSAC	1 cut(s)	348
NsiI	ATGCAT	2 cut(s)	6, 181
PaeR7I	CTCGAG	1 cut(s)	96
PagI	TCATGA	1 cut(s)	939
PceI	AGGCCT	1 cut(s)	752
PdmI	GAANNNNTTC	1 cut(s)	707
PkrI	GCNGC	5 cut(s)	313, 358, 361, 567, 769
PleI	GAGTC	3 cut(s)	412, 721, 937
PmaCI	CACGTG	1 cut(s)	449
PmlI	CACGTG	1 cut(s)	449
PpsI	GAGTC	3 cut(s)	412, 721, 937
Ppu21I	YACGTR	1 cut(s)	449
Psp124BI	GAGCTC	1 cut(s)	846
PspCI	CACGTG	1 cut(s)	449
PspEI	GGTNACC	2 cut(s)	348, 488
PspN4I	GGNNCC	4 cut(s)	411, 539, 858, 909
PspPI	GGNCC	3 cut(s)	409, 857, 991
PspXI	VCTCGAGB	1 cut(s)	96
PstI	CTGCAG	1 cut(s)	361
PsuI	RGATCY	3 cut(s)	15, 505, 934
PvuII	CAGCTG	2 cut(s)	356, 770
RseI	CAYNNNNRTG	1 cut(s)	546
SacI	GAGCTC	1 cut(s)	846
SaqAI	TTAA	3 cut(s)	258, 612, 890
SatI	GCNGC	5 cut(s)	312, 357, 360, 566, 768
Sau3AI	GATC	4 cut(s)	15, 106, 505, 934
Sau96I	GGNCC	3 cut(s)	409, 857, 991
SchI	GAGTC	3 cut(s)	413, 722, 937
ScrFI	CCNGG	2 cut(s)	324, 325
SduI	GDGCHC	1 cut(s)	846
SfaNI	GCATC	3 cut(s)	13, 418, 784
SfcI	CTRYAG	1 cut(s)	357
Sfr274I	CTCGAG	1 cut(s)	96
SinI	GGWCC	3 cut(s)	409, 857, 991
SlaI	CTCGAG	1 cut(s)	96
SmaI	CCCGGG	1 cut(s)	325
SmiMI	CAYNNNNRTG	1 cut(s)	546
SmlI	CTYRAG	3 cut(s)	96, 401, 621
SmoI	CTYRAG	3 cut(s)	96, 401, 621
SrfI	GCCCGGGC	1 cut(s)	325
Sse9I	AATT	2 cut(s)	337, 971
SseBI	AGGCCT	1 cut(s)	752
SsiI	CCGC	1 cut(s)	535
SspI	AATATT	1 cut(s)	983
SspMI	CTAG	3 cut(s)	129, 344, 438
SstI	GAGCTC	1 cut(s)	846
StuI	AGGCCT	1 cut(s)	752
StyD4I	CCNGG	2 cut(s)	322, 323
StyI	CCWWGG	1 cut(s)	753
TaaI	ACNGT	1 cut(s)	618
TaiI	ACGT	1 cut(s)	451
TaqI	TCGA	3 cut(s)	97, 711, 874
TaqII	GACCGA	2 cut(s)	397, 1008
TasI	AATT	2 cut(s)	337, 971
Tru1I	TTAA	3 cut(s)	258, 612, 890
Tru9I	TTAA	3 cut(s)	258, 612, 890
TscAI	CASTG	2 cut(s)	124, 517
TseFI	GTSAC	1 cut(s)	348
TseI	GCWGC	5 cut(s)	311, 356, 359, 565, 767
Tsp45I	GTSAC	1 cut(s)	348
TspDTI	ATGAA	5 cut(s)	129, 531, 596, 830, 890
TspMI	CCCGGG	1 cut(s)	323
TspRI	CASTG	2 cut(s)	124, 517
VpaK11BI	GGWCC	3 cut(s)	409, 857, 991
XapI	RAATTY	1 cut(s)	337
XhoI	CTCGAG	1 cut(s)	96
XmaI	CCCGGG	1 cut(s)	323
XmiI	GTMKAC	1 cut(s)	214
XmnI	GAANNNNTTC	1 cut(s)	707
XspI	CTAG	3 cut(s)	129, 344, 438
Zsp2I	ATGCAT	2 cut(s)	6, 181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.