FvH4_3g14340

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
8766454 .. 8770528
4075 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14340.t1

Sequence Viewer

Length: 1866 bp
ATGAGAATCAAAAAAGCAACAGCTCGTTATGGTAAATCTTACTTTCTAGCTGTCGTTATTTTGTATGTTCAGCTGGTATCATCACCACAGAATGCTTCTGCTCTCGCTAGTTCTACTTCTAGTGAAGCAGAGGCTCTTCTGAAATGGAAAGCCAGCTTTCCAATCCGAATCCACAATAACCTGACCTCATGGACTTACACTCCCAGTAATTCCACCGGTCCAAAACCAAAAGGATGCCCCTTCCATCATTGGACTGGAGTTTCATGCAACAATGCAGGAAGTGTCAACAGAATAAACCTCACCAATTCTGGTATTCAAGGTGGTGTACCTTTGGAGTTCGAAGCATTCACTGATCTCTTATCACTTGATCTGTCCACCAACAAGTTCAATATGTCGATTCCAAGCATTTTGGGTGACTTGTTGCAGTTGACCTTCTTGAATCTAAGCAACAACAAGTTCTGTCAAGAAATTCCATTTCAGTTGGGGAACTTAGTTCACCTCTCCCAACTAGATTTAAGTCACAATTCACTTGAGGGTAGGATACCACAGCTCAGCAAACTCCAAAGCTTGGAGAAGCTGAATCTTTCACACAATAATCTTTCTGGTCTCATCCCCAATTTTGATCAGATGAATGCCCTGGATTTCATTGACATGTCGTACAATCAGTTGCAGGGTCCTGTCCCTAATAACAAAGCATTTCAACATGCCCTCTTGGAAGGTAACAAAGGATTGTGTGGCAATGTCAGAGGACTTCAACCCTGCTTTATTCCTACAGTGGGAAATAAACATTCTTCAACAAAGGAACGAAAGCTCATGCTTTTGATCATTTCCCTTATATTGGGAGTATTGCTCCTTGCTTCCCTTGGAATTGTCCTTATTAGACAAGGAAGAAGAAAAAGACAGGAAACAGAACATGGTGATATGCAGAATGAAGTTTTCTCAATATCCGACTTCGACGGCAAAAGAGTGTACGAGGAGATCCTCAAGGCAACCAATAGTTTTGATGCCAGCCATTGCATCGGAAAAGGAGGATCCGGAAGTGTCTACAAGGCAAAGCTACTATCAGGAACCATAGTTGCAGTGAAGAAACTCCACCCAATACTTAGTAGTGAGGAGACATCTCATAAGGCATTCCTTTCCGAGATAAGGGCACTAATGGAGATAAGGCATCGAAACATTGTGAAACTTCGTGGTTTCTGTTCACATTCACATCACTCTTTTTTGGTCTATGAGTACCTAGAAAAAGGTAGCTTGGCTGCAATCTTGAGCAAAGAATACGAAGCTGAAAAACTGGAGTGGAGCACAAGGGTGAGGATTGTGAAAGGTGTAGCACATGCCCTGTCTTATATGCATCACGATTGCTCTCCACCTATTGTTCATCGAGACGTATCAAGCAACAACATACTGCTGAATTACGAATATGAGCCTGTTGTTTCAGACTTTGGCACCGCCAAGCTTCTAAATCCAGACTCATCGAATTGGACTGCTCCAGCAGGCACATATGGATACATAGCACCAGAGTTAGCTTACACAATGAAGGTAACCGAGAAATGTGATGTTTATAGCTTTGGGGTGTTGGCACTGGAAGTGATCATGGGAAAGCAGCTGGCTGAGTTCCTCTCCTCCTTTTCGACCCCCACCGGCAATGGAGAAATGCAGCTGAATGATGTATTGGACCAGCGCCTACCCGCTCCTACACCTAATGTTCAGAATGAACTGATAACAATTGCAAGGCTAGTAATTGCATGCAAACATTCCCACCCACAATCTAGGCCAACAATGCAAATGGTTTCCCAGGTGTTGTCATCCCAAGGTGCAAATTCCTCTAGACTACCAGAGATTACTATTGAACGACTCATTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

622

Amino Acids

68.67

Weight (kDa)

8.72

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 114 - 218 1.3e-06 Leucine-rich repeat region
LRR_8 PF13855 166 - 223 2.4e-06 Leucine rich repeat
Pkinase PF00069 337 - 598 1.4e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 337 - 600 3e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1445
AccB7I CCANNNNNTGG 1 cut(s) 568
AccBSI CCGCTC 1 cut(s) 1691
AccI GTMKAC 1 cut(s) 1044
AccIII TCCGGA 1 cut(s) 1034
AciI CCGC 2 cut(s) 1449, 1689
AclWI GGATC 3 cut(s) 973, 1026, 1039
AcsI RAATTY 2 cut(s) 468, 1819
AfaI GTAC 4 cut(s) 327, 659, 971, 1235
AfiI CCNNNNNNNGG 4 cut(s) 568, 776, 838, 1146
AflIII ACRYGT 1 cut(s) 651
AgeI ACCGGT 1 cut(s) 215
AgsI TTSAA 7 cut(s) 317, 388, 439, 701, 755, 795, 1850
AjnI CCWGG 2 cut(s) 636, 1794
AjuI GAANNNNNNNTTGG 2 cut(s) 1655, 1687
AleI CACNNNNGTG 1 cut(s) 1307
Alw21I GWGCWC 1 cut(s) 1304
Alw26I GTCTC 3 cut(s) 611, 1109, 1377
AlwI GGATC 3 cut(s) 973, 1026, 1039
Aor13HI TCCGGA 1 cut(s) 1034
AoxI GGCC 1 cut(s) 1772
ApeKI GCWGC 3 cut(s) 1256, 1603, 1657
ApoI RAATTY 2 cut(s) 468, 1819
AsiGI ACCGGT 1 cut(s) 215
AspLEI GCGC 1 cut(s) 1683
AspS9I GGNCC 3 cut(s) 218, 674, 1675
AsuHPI GGTGA 6 cut(s) 75, 292, 425, 488, 929, 1321
AsuII TTCGAA 1 cut(s) 339
AvaII GGWCC 3 cut(s) 218, 674, 1675
BaeGI GKGCMC 1 cut(s) 1153
BamHI GGATCC 1 cut(s) 1031
BanI GGYRCC 1 cut(s) 1445
Bbv12I GWGCWC 1 cut(s) 1304
BbvI GCAGC 3 cut(s) 1243, 1615, 1669
BccI CCATC 1 cut(s) 252
BceAI ACGGC 1 cut(s) 973
BciT130I CCWGG 2 cut(s) 638, 1796
BciVI GTATCC 2 cut(s) 534, 1499
BclI TGATCA 3 cut(s) 622, 822, 1590
BcoDI GTCTC 3 cut(s) 611, 1109, 1377
BfaI CTAG 8 cut(s) 47, 108, 120, 509, 1238, 1736, 1770, 1827
BfmI CTRYAG 1 cut(s) 771
BfoI RGCGCY 1 cut(s) 1684
BfuI GTATCC 2 cut(s) 534, 1499
BisI GCNGC 3 cut(s) 1257, 1604, 1658
BlpI GCTNAGC 1 cut(s) 551
BlsI GCNGC 3 cut(s) 1258, 1605, 1659
Bme1390I CCNGG 2 cut(s) 638, 1796
Bme18I GGWCC 3 cut(s) 218, 674, 1675
BmgT120I GGNCC 3 cut(s) 218, 674, 1675
BmiI GGNNCC 4 cut(s) 675, 1033, 1069, 1447
BmrFI CCNGG 2 cut(s) 638, 1796
BmrI ACTGGG 1 cut(s) 198
BmsI GCATC 5 cut(s) 224, 994, 1026, 1177, 1360
BmuI ACTGGG 1 cut(s) 198
BplI GAGNNNNNCTC 4 cut(s) 834, 866, 1604, 1636
BpmI CTGGAG 3 cut(s) 276, 1313, 1473
Bpu1102I GCTNAGC 1 cut(s) 551
Bpu14I TTCGAA 1 cut(s) 339
BpuEI CTTGAG 3 cut(s) 551, 968, 1285
BsaI GGTCTC 1 cut(s) 611
BsaJI CCNNGG 4 cut(s) 636, 862, 1794, 1810
BsaWI WCCGGW 2 cut(s) 215, 1034
BsaXI ACNNNNNCTCC 2 cut(s) 184, 214
Bsc4I CCNNNNNNNGG 4 cut(s) 568, 776, 838, 1146
Bse118I RCCGGY 2 cut(s) 215, 1640
Bse1I ACTGG 4 cut(s) 204, 259, 1296, 1587
Bse3DI GCAATG 3 cut(s) 745, 1012, 1651
BseAI TCCGGA 1 cut(s) 1034
BseBI CCWGG 2 cut(s) 638, 1796
BseDI CCNNGG 4 cut(s) 636, 862, 1794, 1810
BseGI GGATG 3 cut(s) 239, 609, 1805
BseLI CCNNNNNNNGG 4 cut(s) 568, 776, 838, 1146
BseMI GCAATG 3 cut(s) 745, 1012, 1651
BseMII CTCAG 2 cut(s) 565, 1602
BseNI ACTGG 4 cut(s) 204, 259, 1296, 1587
BseRI GAGGAG 3 cut(s) 989, 1127, 1612
BseSI GKGCMC 1 cut(s) 1153
BseXI GCAGC 3 cut(s) 1243, 1615, 1669
BshFI GGCC 1 cut(s) 1774
BshNI GGYRCC 1 cut(s) 1445
BshTI ACCGGT 1 cut(s) 215
BsiHKAI GWGCWC 1 cut(s) 1304
BsiSI CCGG 3 cut(s) 216, 1035, 1641
BslFI GGGAC 1 cut(s) 665
BslI CCNNNNNNNGG 4 cut(s) 568, 776, 838, 1146
BsmAI GTCTC 3 cut(s) 611, 1109, 1377
BsmBI CGTCTC 1 cut(s) 1377
BsmFI GGGAC 1 cut(s) 665
BsmI GAATGC 4 cut(s) 97, 344, 637, 1130
BsnI GGCC 1 cut(s) 1774
Bso31I GGTCTC 1 cut(s) 611
Bsp119I TTCGAA 1 cut(s) 339
Bsp1286I GDGCHC 2 cut(s) 1153, 1304
Bsp13I TCCGGA 1 cut(s) 1034
Bsp143I GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
Bsp1720I GCTNAGC 1 cut(s) 551
BspACI CCGC 2 cut(s) 1449, 1689
BspANI GGCC 1 cut(s) 1774
BspCNI CTCAG 2 cut(s) 564, 1603
BspEI TCCGGA 1 cut(s) 1034
BspLI GGNNCC 4 cut(s) 675, 1033, 1069, 1447
BspPI GGATC 3 cut(s) 973, 1026, 1039
BspQI GCTCTTC 1 cut(s) 141
BspT104I TTCGAA 1 cut(s) 339
BspT107I GGYRCC 1 cut(s) 1445
BspTNI GGTCTC 1 cut(s) 611
BsrBI CCGCTC 1 cut(s) 1691
BsrDI GCAATG 3 cut(s) 745, 1012, 1651
BsrFI RCCGGY 2 cut(s) 215, 1640
BsrI ACTGG 4 cut(s) 204, 259, 1296, 1587
BssAI RCCGGY 2 cut(s) 215, 1640
BssECI CCNNGG 4 cut(s) 636, 862, 1794, 1810
BssMI GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
BssT1I CCWWGG 2 cut(s) 862, 1810
Bst2UI CCWGG 2 cut(s) 638, 1796
Bst4CI ACNGT 1 cut(s) 775
Bst6I CTCTTC 1 cut(s) 141
BstBI TTCGAA 1 cut(s) 339
BstC8I GCNNGC 5 cut(s) 154, 1009, 1495, 1608, 1747
BstDEI CTNAG 5 cut(s) 443, 490, 551, 1103, 1611
BstEII GGTNACC 1 cut(s) 1540
BstF5I GGATG 3 cut(s) 239, 609, 1805
BstH2I RGCGCY 1 cut(s) 1684
BstHHI GCGC 1 cut(s) 1683
BstKTI GATC 7 cut(s) 355, 370, 625, 825, 981, 1034, 1593
BstMAI GTCTC 3 cut(s) 611, 1109, 1377
BstMBI GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
BstMWI GCNNNNNNNGC 1 cut(s) 1780
BstNI CCWGG 2 cut(s) 638, 1796
BstNSI RCATGY 4 cut(s) 655, 707, 1337, 1749
BstPI GGTNACC 1 cut(s) 1540
BstSCI CCNGG 2 cut(s) 636, 1794
BstSFI CTRYAG 1 cut(s) 771
BstSLI GKGCMC 1 cut(s) 1153
BstV1I GCAGC 3 cut(s) 1243, 1615, 1669
BstX2I RGATCY 2 cut(s) 978, 1031
BstYI RGATCY 2 cut(s) 978, 1031
BsuI GTATCC 2 cut(s) 534, 1499
BsuRI GGCC 1 cut(s) 1774
BtsCI GGATG 3 cut(s) 239, 609, 1805
BtsI GCAGTG 1 cut(s) 1086
BtsIMutI CAGTG 4 cut(s) 348, 780, 1086, 1580
Cac8I GCNNGC 5 cut(s) 154, 1009, 1495, 1608, 1747
CfoI GCGC 1 cut(s) 1683
Cfr10I RCCGGY 2 cut(s) 215, 1640
Cfr13I GGNCC 3 cut(s) 218, 674, 1675
Csp6I GTAC 4 cut(s) 326, 658, 970, 1234
CspAI ACCGGT 1 cut(s) 215
CviAII CATG 9 cut(s) 189, 264, 652, 704, 814, 914, 1334, 1594, 1746
CviQI GTAC 4 cut(s) 326, 658, 970, 1234
DdeI CTNAG 5 cut(s) 443, 490, 551, 1103, 1611
DpnI GATC 7 cut(s) 354, 369, 624, 824, 980, 1033, 1592
DpnII GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
Eam1104I CTCTTC 1 cut(s) 141
EarI CTCTTC 1 cut(s) 141
Eco130I CCWWGG 2 cut(s) 862, 1810
Eco31I GGTCTC 1 cut(s) 611
Eco47I GGWCC 3 cut(s) 218, 674, 1675
Eco91I GGTNACC 1 cut(s) 1540
EcoO109I RGGNCCY 1 cut(s) 674
EcoO65I GGTNACC 1 cut(s) 1540
EcoRII CCWGG 2 cut(s) 636, 1794
EcoT14I CCWWGG 2 cut(s) 862, 1810
EcoT22I ATGCAT 1 cut(s) 1353
ErhI CCWWGG 2 cut(s) 862, 1810
Esp3I CGTCTC 1 cut(s) 1377
FaeI CATG 9 cut(s) 192, 267, 655, 707, 817, 917, 1337, 1597, 1749
FaqI GGGAC 1 cut(s) 665
FatI CATG 9 cut(s) 188, 263, 651, 703, 813, 913, 1333, 1593, 1745
FauI CCCGC 1 cut(s) 1696
FauNDI CATATG 1 cut(s) 1501
FbaI TGATCA 3 cut(s) 622, 822, 1590
FblI GTMKAC 1 cut(s) 1044
Fnu4HI GCNGC 3 cut(s) 1257, 1604, 1658
FokI GGATG 3 cut(s) 246, 596, 1792
Fsp4HI GCNGC 3 cut(s) 1257, 1604, 1658
FspBI CTAG 8 cut(s) 47, 108, 120, 509, 1238, 1736, 1770, 1827
GlaI GCGC 1 cut(s) 1682
GluI GCNGC 3 cut(s) 1257, 1604, 1658
GsuI CTGGAG 3 cut(s) 276, 1313, 1473
HaeII RGCGCY 1 cut(s) 1684
HaeIII GGCC 1 cut(s) 1774
HapII CCGG 3 cut(s) 216, 1035, 1641
HhaI GCGC 1 cut(s) 1683
Hin1II CATG 9 cut(s) 192, 267, 655, 707, 817, 917, 1337, 1597, 1749
Hin6I GCGC 1 cut(s) 1681
HinP1I GCGC 1 cut(s) 1681
HincII GTYRAC 2 cut(s) 286, 429
HindII GTYRAC 2 cut(s) 286, 429
HindIII AAGCTT 2 cut(s) 565, 1454
HinfI GANTC 7 cut(s) 6, 168, 397, 439, 580, 1469, 1854
HpaII CCGG 3 cut(s) 216, 1035, 1641
HphI GGTGA 6 cut(s) 75, 292, 425, 488, 929, 1321
Hpy166II GTNNAC 8 cut(s) 286, 326, 375, 429, 496, 970, 1045, 1202
Hpy188I TCNGA 9 cut(s) 141, 167, 627, 746, 949, 1022, 1141, 1438, 1710
Hpy188III TCNNGA 9 cut(s) 436, 464, 1035, 1065, 1264, 1355, 1382, 1466, 1827
Hpy8I GTNNAC 8 cut(s) 286, 326, 375, 429, 496, 970, 1045, 1202
Hpy99I CGWCG 1 cut(s) 959
HpyAV CCTTC 4 cut(s) 250, 442, 710, 1531
HpyCH4III ACNGT 1 cut(s) 775
HpyCH4IV ACGT 1 cut(s) 1386
HpyF10VI GCNNNNNNNGC 1 cut(s) 1780
HpyF3I CTNAG 5 cut(s) 443, 490, 551, 1103, 1611
HpySE526I ACGT 1 cut(s) 1386
Hsp92II CATG 9 cut(s) 192, 267, 655, 707, 817, 917, 1337, 1597, 1749
HspAI GCGC 1 cut(s) 1681
Kpn2I TCCGGA 1 cut(s) 1034
Ksp22I TGATCA 3 cut(s) 622, 822, 1590
Kzo9I GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
LguI GCTCTTC 1 cut(s) 141
LmnI GCTCC 4 cut(s) 855, 1299, 1492, 1696
Lsp1109I GCAGC 3 cut(s) 1243, 1615, 1669
LweI GCATC 5 cut(s) 224, 994, 1026, 1177, 1360
MaeI CTAG 8 cut(s) 47, 108, 120, 509, 1238, 1736, 1770, 1827
MaeII ACGT 1 cut(s) 1386
MaeIII GTNAC 4 cut(s) 413, 518, 719, 1540
MalI GATC 7 cut(s) 354, 369, 624, 824, 980, 1033, 1592
MbiI CCGCTC 1 cut(s) 1691
MboI GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
MboII GAAGA 5 cut(s) 128, 783, 900, 903, 1096
MfeI CAATTG 1 cut(s) 1725
MflI RGATCY 2 cut(s) 978, 1031
MhlI GDGCHC 2 cut(s) 1153, 1304
MlyI GAGTC 2 cut(s) 1463, 1848
MmeI TCCRAC 1 cut(s) 972
Mph1103I ATGCAT 1 cut(s) 1353
MroI TCCGGA 1 cut(s) 1034
MseI TTAA 2 cut(s) 515, 1864
MslI CAYNNNNRTG 2 cut(s) 650, 1307
MspA1I CMGCKG 3 cut(s) 73, 1606, 1660
MspI CCGG 3 cut(s) 216, 1035, 1641
MspR9I CCNGG 2 cut(s) 638, 1796
MunI CAATTG 1 cut(s) 1725
Mva1269I GAATGC 4 cut(s) 97, 344, 637, 1130
MvaI CCWGG 2 cut(s) 638, 1796
MwoI GCNNNNNNNGC 1 cut(s) 1780
NdeI CATATG 1 cut(s) 1501
NdeII GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
NlaIII CATG 9 cut(s) 192, 267, 655, 707, 817, 917, 1337, 1597, 1749
NlaIV GGNNCC 4 cut(s) 675, 1033, 1069, 1447
NmuCI GTSAC 2 cut(s) 413, 518
NsiI ATGCAT 1 cut(s) 1353
NspI RCATGY 4 cut(s) 655, 707, 1337, 1749
NspV TTCGAA 1 cut(s) 339
OliI CACNNNNGTG 1 cut(s) 1307
PaeI GCATGC 1 cut(s) 1749
PciI ACATGT 1 cut(s) 651
PciSI GCTCTTC 1 cut(s) 141
PctI GAATGC 4 cut(s) 97, 344, 637, 1130
PfeI GAWTC 5 cut(s) 6, 168, 397, 439, 580
PflMI CCANNNNNTGG 1 cut(s) 568
PinAI ACCGGT 1 cut(s) 215
PkrI GCNGC 3 cut(s) 1258, 1605, 1659
PleI GAGTC 2 cut(s) 1463, 1848
PpsI GAGTC 2 cut(s) 1463, 1848
PpuMI RGGWCCY 1 cut(s) 674
PscI ACATGT 1 cut(s) 651
Psp5II RGGWCCY 1 cut(s) 674
Psp6I CCWGG 2 cut(s) 636, 1794
PspEI GGTNACC 1 cut(s) 1540
PspGI CCWGG 2 cut(s) 636, 1794
PspN4I GGNNCC 4 cut(s) 675, 1033, 1069, 1447
PspPI GGNCC 3 cut(s) 218, 674, 1675
PspPPI RGGWCCY 1 cut(s) 674
PsuI RGATCY 2 cut(s) 978, 1031
PvuII CAGCTG 3 cut(s) 73, 1606, 1660
RsaI GTAC 4 cut(s) 327, 659, 971, 1235
RsaNI GTAC 4 cut(s) 326, 658, 970, 1234
RseI CAYNNNNRTG 2 cut(s) 650, 1307
SapI GCTCTTC 1 cut(s) 141
SaqAI TTAA 2 cut(s) 515, 1864
SatI GCNGC 3 cut(s) 1257, 1604, 1658
Sau3AI GATC 7 cut(s) 352, 367, 622, 822, 978, 1031, 1590
Sau96I GGNCC 3 cut(s) 218, 674, 1675
SchI GAGTC 2 cut(s) 1463, 1848
ScrFI CCNGG 2 cut(s) 638, 1796
SduI GDGCHC 2 cut(s) 1153, 1304
SfaNI GCATC 5 cut(s) 224, 994, 1026, 1177, 1360
SfcI CTRYAG 1 cut(s) 771
SfuI TTCGAA 1 cut(s) 339
SinI GGWCC 3 cut(s) 218, 674, 1675
SmiMI CAYNNNNRTG 2 cut(s) 650, 1307
SmlI CTYRAG 3 cut(s) 530, 983, 1264
SmoI CTYRAG 3 cut(s) 530, 983, 1264
SphI GCATGC 1 cut(s) 1749
SsiI CCGC 2 cut(s) 1449, 1689
SspMI CTAG 8 cut(s) 47, 108, 120, 509, 1238, 1736, 1770, 1827
StyD4I CCNGG 2 cut(s) 636, 1794
StyI CCWWGG 2 cut(s) 862, 1810
TaaI ACNGT 1 cut(s) 775
TaiI ACGT 1 cut(s) 1389
TaqI TCGA 7 cut(s) 339, 395, 954, 1171, 1381, 1475, 1631
TfiI GAWTC 5 cut(s) 6, 168, 397, 439, 580
Tru1I TTAA 2 cut(s) 515, 1864
Tru9I TTAA 2 cut(s) 515, 1864
TscAI CASTG 4 cut(s) 355, 780, 1086, 1587
TseFI GTSAC 2 cut(s) 413, 518
TseI GCWGC 3 cut(s) 1256, 1603, 1657
Tsp45I GTSAC 2 cut(s) 413, 518
TspDTI ATGAA 7 cut(s) 252, 634, 644, 945, 1367, 1550, 1728
TspRI CASTG 4 cut(s) 355, 780, 1086, 1587
Van91I CCANNNNNTGG 1 cut(s) 568
VpaK11BI GGWCC 3 cut(s) 218, 674, 1675
XapI RAATTY 2 cut(s) 468, 1819
XbaI TCTAGA 1 cut(s) 1826
XceI RCATGY 4 cut(s) 655, 707, 1337, 1749
XcmI CCANNNNNNNNNTGG 1 cut(s) 251
XmiI GTMKAC 1 cut(s) 1044
XspI CTAG 8 cut(s) 47, 108, 120, 509, 1238, 1736, 1770, 1827
Zsp2I ATGCAT 1 cut(s) 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.