RLG00000033342

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
25986416 .. 25988983
2568 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033342

Sequence Viewer

Length: 2568 bp
ATGGCAACATTTCTAGCTTACCTTCTTTTCTATGTTCAGCTGGTTTCATCCCCAAACAATGTTTTTGCTTCTGCTAGTTCTAGATCTAGTGAAGCAGAGGCTCTTCTCAAATGGAAAGCCAGCTTTCGAAACCAAACCCAGAATAATAATCTGACCTCCTGGACTTACTTTCCCAGCAATTCCACCAATCCAAAAGCGAAAGGAAGCCCATGCAACTTTTGGACTGGCATTTCATGCAACACTGCTGGAAGTGTCAACAGGACAAACCTGACAAATTCTGGTATACAAGGTACGCTGCATGAATTCCCATTCCTGTCCTTGCCCAATCTTGAATTTATTGATCTCAGCTTGAATGAACTCTTTGATGCCATCCCATCTAAGATTAGTTCCCTTTCCAAACTCATCTATTTTGATCTATCTTATAATAAGTTGTCTGGGAAAATTCCACCAGAAATTGGTCTTCTCACAAATCTTGAGGTCTTACACCTAAACTCGAATCAGTTAAATGGTTCAATTCCTCCGGAACTAGGTCATCTCAAGTCTCTTTCCGAGCTTGCTCTTTACGAGAATAGTCTAGAAGGTTCCATTCCTGCTTCTCTAGGTAATTTGAGTAACTTGACTTATTTGTATCTTTATGCAAATCAGCTCTCTGGTTCCATCCCACTAGAAATTGGTCTTCTACCAAATCTTGAGGTCGTGGACCTGAATGGAAACCAGTTAAACGGCTCAATTCCTCGAGATATAGGTCAGCTTAAGTTTCTTCGCCAGCTTATGTTGTACAACAACACTCTAGAAGGTCCCATTCCTGCTTCTCTAAGTAACTTAAGCAGCCTGACTGATTTGTCTCTCGATGAAAATCAACTTTCGGGTTCAATTCCTGCTTCTCTAGGTGACTTGAGCAACTTGACCCTTTTGTCTCTCTATCACAACCAACTTTTTGGTTCCATTCCTCAAGAAATTGGCCTGCTAAAAAATCTTCAGGTGCTAGACCTAAGTGGAAATCAGTTAAATGGCTCAATTCCCCAAGAAATAGGTCAGCTTAAGTTTCTTTCTGAGCTTTCTCTGTACAACAACACTCTAGAAGGTCTAATTCCCGCTTCTCTGGGTAATTTGAGTTACCTAGAGACTTTGTCTCTCTATGGAAATCAACTTTCTGGTTTCATTCCTTTGGAAATCGGTAACCTGTCTAATTTGGTTAAGCTTTACATGCATAGCAACAACTTAACAGGTCCCATCCCTCCAAATTTTGGAAGCTTGAAAAGGCTAACTCATATGTACTTGTTCAACAATACTCTCTTCGGTTCTATCCCTTCAGAAATTGGAAATCTAAAATCTCTAAAGGAATTATGCATACAAAGCAACAACCTTTCCGGTCCAATCTCCACGTCTCTAGGTGATCTAACAAACCTTACCCACCTTCGTCTCTATGAAAATCATCTTTCTGCAACTATTCCAAAAGAGATAGGGAACCTGAAATCTATTGTGGACCTACAACTGAACGAGAATCAACTCAATGGTTCCATTCCCACTTCGTTTGTTAACCTGACGAACTTGGAAATCTTATTCCTCCGTGATAACCAACTTTCTGGCTCCATCCCTCAAGAGATAGGGAGTCTCATGAAGTTGACTATTCTGGAGTTGGATACTAACCAATTTTCTGGTCAGTTTCCCCATAATGTTTGCCGAGGCGGATCACTAGAAAGCTTTACTATACACACCAACCAGTTGACAGGTCCCCTCTCCCAAAGCCTCAAAACTTGCAAGAGCTTAGTCCGAGTCCGTCTTGATGGGAATCATCTGATAGGCAATATATCTGAGGAGTTTGATGCATATCCAAATCTTCAATATATAGACCTAAGCCACAATAACTTCTACGGCGAAATCTCACCAATCTGGGGGCAATGTCCTCAACTAGGAACCTTACGAAGTGCGGGAAACAACCTCACAGGCAGCATACCACCACAGATCGGCAATGCTACCCGACTTCATGTTCTCAATCTTTCTTCAAATCAACTATTTGGGGTGATTCCTAATGAGGTTGGGAGATTGACTTCTTTGTTGAGCCTGGCATTGAATGACAATCAAATGGGGGGTCGTATACCCTCAGAGATTGGATCATTGACTAATCTTGAATACCTTGACCTATCCACCAACAAATTCAATGACTTCATTCCAAGTAGTTTAGGTGACTTGGTCAAACTACACCACTTGCATTTGGGCAACAACAAATTTGGTCAAGAAATTCCTTTCAAGTTGGGGAATCTAGCTCACCTGTCAGAACTAGATCTAAGTAGCAATTTACTTCAGGGAAAAATACCATCAGAAATGAGTAAGATGCAAAGCTTGGAGAAGTTGAATCTTTCCCACAACAATCTTTCCGGTCTCATTCCAGAAACTTTTGAACAGTTGCATGGCTTGAATTACATCGACATGTCCTATAATCAATTGGAAGGTCCCATTCCCAACAACAAAGCATTTCAAGGTGCTAACTTGGAAGGAAATAAAGGATTGTGCGGTAATGTTGGAGGACTTCAACCCTGCACTAATTCTTCTGTGAGAAATAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

856

Amino Acids

93.34

Weight (kDa)

5.48

Isoelectric Point (pI)

29.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 109 - 210 8.8e-09 Leucine-rich repeat region
LRR_8 PF13855 156 - 216 5.4e-06 Leucine rich repeat
LRR_14 PF23598 198 - 308 1.1e-11 Leucine-rich repeat region
LRR_14 PF23598 295 - 381 2.5e-11 Leucine-rich repeat region
LRR_14 PF23598 388 - 476 4.8e-10 Leucine-rich repeat region
LRR_14 PF23598 463 - 633 2.1e-11 Leucine-rich repeat region
LRR_14 PF23598 651 - 740 3.6e-09 Leucine-rich repeat region
LRR_8 PF13855 706 - 744 9.4e-06 Leucine rich repeat
LRR_8 PF13855 757 - 816 4.2e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AasI GACNNNNNNGTC 2 cut(s) 841, 913
AccB7I CCANNNNNTGG 2 cut(s) 455, 1247
AccI GTMKAC 2 cut(s) 283, 2098
AccIII TCCGGA 1 cut(s) 520
AciI CCGC 4 cut(s) 1095, 1689, 1931, 2514
AclWI GGATC 2 cut(s) 1699, 2122
AcsI RAATTY 8 cut(s) 274, 302, 332, 441, 1243, 2156, 2228, 2241
AcuI CTGAAG 3 cut(s) 962, 1296, 2288
AfaI GTAC 4 cut(s) 292, 779, 1067, 1277
AfiI CCNNNNNNNGG 6 cut(s) 455, 527, 1247, 1895, 1913, 1967
AflII CTTAAG 3 cut(s) 752, 823, 1040
AflIII ACRYGT 1 cut(s) 2430
AjiI CACGTC 1 cut(s) 1386
AjnI CCWGG 2 cut(s) 158, 2064
Alw26I GTCTC 9 cut(s) 546, 849, 921, 1118, 1137, 1392, 1427, 1619, 2387
AlwI GGATC 2 cut(s) 1699, 2122
Ama87I CYCGRG 1 cut(s) 735
Aor13HI TCCGGA 1 cut(s) 520
AoxI GGCC 1 cut(s) 961
ApeKI GCWGC 3 cut(s) 295, 828, 1950
ApoI RAATTY 8 cut(s) 274, 302, 332, 441, 1243, 2156, 2228, 2241
ArsI GACNNNNNNTTYG 2 cut(s) 2077, 2109
AspS9I GGNCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
AsuHPI GGTGA 6 cut(s) 902, 1406, 1878, 2035, 2198, 2261
AsuII TTCGAA 1 cut(s) 127
AvaI CYCGRG 1 cut(s) 735
AvaII GGWCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
BbsI GAAGAC 2 cut(s) 452, 668
BbvI GCAGC 3 cut(s) 282, 840, 1962
BccI CCATC 7 cut(s) 377, 382, 665, 1241, 1601, 1781, 2326
BceAI ACGGC 2 cut(s) 739, 1891
BciT130I CCWGG 2 cut(s) 160, 2066
BciVI GTATCC 1 cut(s) 1636
BcoDI GTCTC 9 cut(s) 546, 849, 921, 1118, 1137, 1392, 1427, 1619, 2387
BfrI CTTAAG 3 cut(s) 752, 823, 1040
BfuI GTATCC 1 cut(s) 1636
BglII AGATCT 2 cut(s) 83, 2284
BisI GCNGC 3 cut(s) 296, 829, 1951
BlsI GCNGC 3 cut(s) 297, 830, 1952
Bme1390I CCNGG 2 cut(s) 160, 2066
Bme18I GGWCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
BmeT110I CYCGRG 1 cut(s) 735
BmgBI CACGTC 1 cut(s) 1386
BmgT120I GGNCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
BmrFI CCNGG 2 cut(s) 160, 2066
BmsI GCATC 3 cut(s) 355, 1816, 2325
BpiI GAAGAC 2 cut(s) 452, 668
BpmI CTGGAG 1 cut(s) 1655
Bpu10I CCTNAGC 1 cut(s) 1856
Bpu14I TTCGAA 1 cut(s) 127
BpuEI CTTGAG 6 cut(s) 494, 521, 710, 916, 936, 1584
BsaBI GATNNNNATC 3 cut(s) 855, 1791, 1830
BsaI GGTCTC 1 cut(s) 2387
BsaJI CCNNGG 1 cut(s) 1684
BsaWI WCCGGW 3 cut(s) 520, 1370, 2378
Bsc4I CCNNNNNNNGG 6 cut(s) 455, 527, 1247, 1895, 1913, 1967
Bse1I ACTGG 3 cut(s) 229, 715, 1723
Bse3DI GCAATG 2 cut(s) 1907, 1978
Bse8I GATNNNNATC 3 cut(s) 855, 1791, 1830
BseAI TCCGGA 1 cut(s) 520
BseBI CCWGG 2 cut(s) 160, 2066
BseDI CCNNGG 1 cut(s) 1684
BseGI GGATG 5 cut(s) 47, 369, 657, 1233, 1593
BseJI GATNNNNATC 3 cut(s) 855, 1791, 1830
BseLI CCNNNNNNNGG 6 cut(s) 455, 527, 1247, 1895, 1913, 1967
BseMI GCAATG 2 cut(s) 1907, 1978
BseMII CTCAG 4 cut(s) 358, 1044, 1806, 2118
BseNI ACTGG 3 cut(s) 229, 715, 1723
BseRI GAGGAG 1 cut(s) 1832
BseXI GCAGC 3 cut(s) 282, 840, 1962
BseYI CCCAGC 1 cut(s) 173
BsgI GTGCAG 1 cut(s) 2524
BshFI GGCC 1 cut(s) 963
BsiHKCI CYCGRG 1 cut(s) 735
BsiSI CCGG 3 cut(s) 521, 1371, 2379
BslFI GGGAC 4 cut(s) 783, 1215, 1719, 2439
BslI CCNNNNNNNGG 6 cut(s) 455, 527, 1247, 1895, 1913, 1967
BsmAI GTCTC 9 cut(s) 546, 849, 921, 1118, 1137, 1392, 1427, 1619, 2387
BsmBI CGTCTC 2 cut(s) 1392, 1427
BsmFI GGGAC 4 cut(s) 783, 1215, 1719, 2439
BsnI GGCC 1 cut(s) 963
Bso31I GGTCTC 1 cut(s) 2387
BsoBI CYCGRG 1 cut(s) 735
Bsp119I TTCGAA 1 cut(s) 127
Bsp13I TCCGGA 1 cut(s) 520
Bsp1407I TGTACA 2 cut(s) 777, 1065
Bsp143I GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
BspACI CCGC 4 cut(s) 1095, 1689, 1931, 2514
BspANI GGCC 1 cut(s) 963
BspCNI CTCAG 4 cut(s) 357, 1045, 1807, 2117
BspEI TCCGGA 1 cut(s) 520
BspHI TCATGA 1 cut(s) 1617
BspPI GGATC 2 cut(s) 1699, 2122
BspQI GCTCTTC 1 cut(s) 108
BspT104I TTCGAA 1 cut(s) 127
BspTI CTTAAG 3 cut(s) 752, 823, 1040
BspTNI GGTCTC 1 cut(s) 2387
BsrDI GCAATG 2 cut(s) 1907, 1978
BsrGI TGTACA 2 cut(s) 777, 1065
BsrI ACTGG 3 cut(s) 229, 715, 1723
BssECI CCNNGG 1 cut(s) 1684
BssMI GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
BssNAI GTATAC 2 cut(s) 284, 2099
Bst1107I GTATAC 2 cut(s) 284, 2099
Bst2UI CCWGG 2 cut(s) 160, 2066
Bst4CI ACNGT 1 cut(s) 2406
Bst6I CTCTTC 2 cut(s) 108, 1301
BstAFI CTTAAG 3 cut(s) 752, 823, 1040
BstAPI GCANNNNNTGC 1 cut(s) 234
BstAUI TGTACA 2 cut(s) 777, 1065
BstBI TTCGAA 1 cut(s) 127
BstC8I GCNNGC 4 cut(s) 121, 555, 767, 965
BstEII GGTNACC 1 cut(s) 1178
BstENI CCTNNNNNAGG 1 cut(s) 1911
BstF5I GGATG 5 cut(s) 47, 369, 657, 1233, 1593
BstKTI GATC 8 cut(s) 86, 343, 415, 1399, 1694, 1968, 2117, 2287
BstMAI GTCTC 9 cut(s) 546, 849, 921, 1118, 1137, 1392, 1427, 1619, 2387
BstMBI GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
BstMWI GCNNNNNNNGC 3 cut(s) 234, 1207, 1356
BstNI CCWGG 2 cut(s) 160, 2066
BstNSI RCATGY 2 cut(s) 1210, 2434
BstPI GGTNACC 1 cut(s) 1178
BstSCI CCNGG 2 cut(s) 158, 2064
BstV1I GCAGC 3 cut(s) 282, 840, 1962
BstV2I GAAGAC 2 cut(s) 452, 668
BstX2I RGATCY 2 cut(s) 83, 2284
BstXI CCANNNNNNTGG 3 cut(s) 938, 1586, 1658
BstYI RGATCY 2 cut(s) 83, 2284
BstZ17I GTATAC 2 cut(s) 284, 2099
BsuI GTATCC 1 cut(s) 1636
BsuRI GGCC 1 cut(s) 963
BtrI CACGTC 1 cut(s) 1386
BtsCI GGATG 5 cut(s) 47, 369, 657, 1233, 1593
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 1 cut(s) 240
Cac8I GCNNGC 4 cut(s) 121, 555, 767, 965
CciI TCATGA 1 cut(s) 1617
Cfr13I GGNCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
Csp6I GTAC 4 cut(s) 291, 778, 1066, 1276
CspCI CAANNNNNGTGG 2 cut(s) 1516, 1551
CviAII CATG 8 cut(s) 210, 234, 299, 1207, 1618, 1988, 2411, 2431
CviQI GTAC 4 cut(s) 291, 778, 1066, 1276
DpnI GATC 8 cut(s) 85, 342, 414, 1398, 1693, 1967, 2116, 2286
DpnII GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
DrdI GACNNNNNNGTC 2 cut(s) 841, 913
DseDI GACNNNNNNGTC 2 cut(s) 841, 913
Eam1104I CTCTTC 2 cut(s) 108, 1301
EarI CTCTTC 2 cut(s) 108, 1301
EciI GGCGGA 1 cut(s) 1704
Eco31I GGTCTC 1 cut(s) 2387
Eco47I GGWCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
Eco57I CTGAAG 3 cut(s) 962, 1296, 2288
Eco88I CYCGRG 1 cut(s) 735
Eco91I GGTNACC 1 cut(s) 1178
EcoNI CCTNNNNNAGG 1 cut(s) 1911
EcoO109I RGGNCCY 4 cut(s) 797, 1229, 1733, 2453
EcoO65I GGTNACC 1 cut(s) 1178
EcoRI GAATTC 1 cut(s) 302
EcoRII CCWGG 2 cut(s) 158, 2064
EcoT22I ATGCAT 3 cut(s) 1212, 1352, 1831
Esp3I CGTCTC 2 cut(s) 1392, 1427
FaeI CATG 8 cut(s) 213, 237, 302, 1210, 1621, 1991, 2414, 2434
FaqI GGGAC 4 cut(s) 783, 1215, 1719, 2439
FatI CATG 8 cut(s) 209, 233, 298, 1206, 1617, 1987, 2410, 2430
FauI CCCGC 2 cut(s) 1102, 1924
FauNDI CATATG 1 cut(s) 1272
FblI GTMKAC 2 cut(s) 283, 2098
Fnu4HI GCNGC 3 cut(s) 296, 829, 1951
FokI GGATG 5 cut(s) 34, 356, 644, 1220, 1580
Fsp4HI GCNGC 3 cut(s) 296, 829, 1951
GluI GCNGC 3 cut(s) 296, 829, 1951
GsaI CCCAGC 1 cut(s) 177
GsuI CTGGAG 1 cut(s) 1655
HaeIII GGCC 1 cut(s) 963
HapII CCGG 3 cut(s) 521, 1371, 2379
Hin1II CATG 8 cut(s) 213, 237, 302, 1210, 1621, 1991, 2414, 2434
HincII GTYRAC 4 cut(s) 256, 1540, 1626, 1728
HindII GTYRAC 4 cut(s) 256, 1540, 1626, 1728
HindIII AAGCTT 4 cut(s) 1199, 1252, 1702, 2341
HinfI GANTC 8 cut(s) 496, 1504, 1612, 1776, 1792, 2026, 2260, 2356
HpaI GTTAAC 1 cut(s) 1540
HpaII CCGG 3 cut(s) 521, 1371, 2379
HphI GGTGA 6 cut(s) 902, 1406, 1878, 2035, 2198, 2261
Hpy166II GTNNAC 8 cut(s) 256, 284, 700, 1486, 1540, 1626, 1728, 2099
Hpy8I GTNNAC 8 cut(s) 256, 284, 700, 1486, 1540, 1626, 1728, 2099
HpyAV CCTTC 8 cut(s) 32, 572, 788, 1076, 1320, 1427, 2444, 2489
HpyCH4III ACNGT 1 cut(s) 2406
HpyCH4IV ACGT 1 cut(s) 1385
HpyF10VI GCNNNNNNNGC 3 cut(s) 234, 1207, 1356
HpySE526I ACGT 1 cut(s) 1385
Hsp92II CATG 8 cut(s) 213, 237, 302, 1210, 1621, 1991, 2414, 2434
Kpn2I TCCGGA 1 cut(s) 520
KspAI GTTAAC 1 cut(s) 1540
Kzo9I GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 1 cut(s) 1595
Lsp1109I GCAGC 3 cut(s) 282, 840, 1962
LweI GCATC 3 cut(s) 355, 1816, 2325
MaeII ACGT 1 cut(s) 1385
MaeIII GTNAC 6 cut(s) 611, 818, 890, 1115, 1178, 2186
MalI GATC 8 cut(s) 85, 342, 414, 1398, 1693, 1967, 2116, 2286
MboI GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
MboII GAAGA 9 cut(s) 95, 452, 668, 752, 968, 1288, 1832, 1995, 2541
MfeI CAATTG 1 cut(s) 2444
MflI RGATCY 2 cut(s) 83, 2284
MlyI GAGTC 2 cut(s) 1621, 1785
MmeI TCCRAC 2 cut(s) 1620, 2503
Mph1103I ATGCAT 3 cut(s) 1212, 1352, 1831
MroI TCCGGA 1 cut(s) 520
MseI TTAA 9 cut(s) 503, 719, 753, 824, 1007, 1041, 1197, 1223, 1539
MslI CAYNNNNRTG 1 cut(s) 2429
MspA1I CMGCKG 1 cut(s) 40
MspCI CTTAAG 3 cut(s) 752, 823, 1040
MspI CCGG 3 cut(s) 521, 1371, 2379
MspR9I CCNGG 2 cut(s) 160, 2066
MunI CAATTG 1 cut(s) 2444
MvaI CCWGG 2 cut(s) 160, 2066
MwoI GCNNNNNNNGC 3 cut(s) 234, 1207, 1356
NdeI CATATG 1 cut(s) 1272
NdeII GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
NlaIII CATG 8 cut(s) 213, 237, 302, 1210, 1621, 1991, 2414, 2434
NmeAIII GCCGAG 1 cut(s) 1709
NmuCI GTSAC 2 cut(s) 890, 2186
NsiI ATGCAT 3 cut(s) 1212, 1352, 1831
NspI RCATGY 2 cut(s) 1210, 2434
NspV TTCGAA 1 cut(s) 127
PaeR7I CTCGAG 1 cut(s) 735
PagI TCATGA 1 cut(s) 1617
PciI ACATGT 1 cut(s) 2430
PciSI GCTCTTC 1 cut(s) 108
PfeI GAWTC 6 cut(s) 496, 1504, 1792, 2026, 2260, 2356
PflFI GACNNNGTC 2 cut(s) 1129, 2192
PflMI CCANNNNNTGG 2 cut(s) 455, 1247
PfoI TCCNGGA 1 cut(s) 158
PkrI GCNGC 3 cut(s) 297, 830, 1952
PleI GAGTC 2 cut(s) 1620, 1784
PpsI GAGTC 2 cut(s) 1620, 1784
PpuMI RGGWCCY 4 cut(s) 797, 1229, 1733, 2453
PscI ACATGT 1 cut(s) 2430
PsiI TTATAA 1 cut(s) 423
Psp5II RGGWCCY 4 cut(s) 797, 1229, 1733, 2453
Psp6I CCWGG 2 cut(s) 158, 2064
PspEI GGTNACC 1 cut(s) 1178
PspFI CCCAGC 1 cut(s) 173
PspGI CCWGG 2 cut(s) 158, 2064
PspPI GGNCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
PspPPI RGGWCCY 4 cut(s) 797, 1229, 1733, 2453
PsuI RGATCY 2 cut(s) 83, 2284
PsyI GACNNNGTC 2 cut(s) 1129, 2192
PvuII CAGCTG 1 cut(s) 40
RsaI GTAC 4 cut(s) 292, 779, 1067, 1277
RsaNI GTAC 4 cut(s) 291, 778, 1066, 1276
RseI CAYNNNNRTG 1 cut(s) 2429
SapI GCTCTTC 1 cut(s) 108
SaqAI TTAA 9 cut(s) 503, 719, 753, 824, 1007, 1041, 1197, 1223, 1539
SatI GCNGC 3 cut(s) 296, 829, 1951
Sau3AI GATC 8 cut(s) 83, 340, 412, 1396, 1691, 1965, 2114, 2284
Sau96I GGNCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
SchI GAGTC 2 cut(s) 1621, 1785
ScrFI CCNGG 2 cut(s) 160, 2066
SfaNI GCATC 3 cut(s) 355, 1816, 2325
Sfr274I CTCGAG 1 cut(s) 735
SfuI TTCGAA 1 cut(s) 127
SinI GGWCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
SlaI CTCGAG 1 cut(s) 735
SmiMI CAYNNNNRTG 1 cut(s) 2429
SsiI CCGC 4 cut(s) 1095, 1689, 1931, 2514
StyD4I CCNGG 2 cut(s) 158, 2064
TaaI ACNGT 1 cut(s) 2406
TaiI ACGT 1 cut(s) 1388
TaqI TCGA 5 cut(s) 127, 494, 736, 849, 2427
TatI WGTACW 3 cut(s) 777, 1065, 1275
TfiI GAWTC 6 cut(s) 496, 1504, 1792, 2026, 2260, 2356
Tru1I TTAA 9 cut(s) 503, 719, 753, 824, 1007, 1041, 1197, 1223, 1539
Tru9I TTAA 9 cut(s) 503, 719, 753, 824, 1007, 1041, 1197, 1223, 1539
TscAI CASTG 1 cut(s) 247
TseFI GTSAC 2 cut(s) 890, 2186
TseI GCWGC 3 cut(s) 295, 828, 1950
Tsp45I GTSAC 2 cut(s) 890, 2186
TspGWI ACGGA 2 cut(s) 1559, 1769
TspRI CASTG 1 cut(s) 247
Tth111I GACNNNGTC 2 cut(s) 1129, 2192
Van91I CCANNNNNTGG 2 cut(s) 455, 1247
Vha464I CTTAAG 3 cut(s) 752, 823, 1040
VpaK11BI GGWCC 7 cut(s) 700, 797, 1229, 1373, 1486, 1733, 2453
XagI CCTNNNNNAGG 1 cut(s) 1911
XapI RAATTY 8 cut(s) 274, 302, 332, 441, 1243, 2156, 2228, 2241
XbaI TCTAGA 4 cut(s) 80, 574, 790, 1078
XceI RCATGY 2 cut(s) 1210, 2434
XcmI CCANNNNNNNNNTGG 1 cut(s) 216
XhoI CTCGAG 1 cut(s) 735
XmiI GTMKAC 2 cut(s) 283, 2098
Zsp2I ATGCAT 3 cut(s) 1212, 1352, 1831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.