MD04G1006600.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
767787 .. 772933
5147 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1006600.v1.1.491

Sequence Viewer

Length: 2187 bp
ATGTTGAGGAAAAACTTAGAGTACACAACTCTAACACAAGTTTGTGATCAATCGCTCGTCAAATGGAAGGACGGCTTATCTTCTTCACCATCATCATCATCGACACCTTGGCTACTCAATTCATGGTCCATCACCAACCTCAACAGCCTCTGCAACTGGACTGCCATTTCCTGCTCCAAAACCAGAACAGTCTCCAAAATAGACCTCTCCAATATGCACATTATCGGATCACTGTCCTTTTTCGACTTTCCCTTATTTCCGAATCTCACCCACTTCAATCTAAATGGCAACAGTTTCGGAGGGCGTATACCGTATGCCATTGGAAATCTCTCCAGGCTAATATCTTTGGACTTGGGCAACAACTTTTTTGATCAACAAATTCCATCTGTGATTGACCAGGTAACAGAGCTTCAGTATCTAAATCTCCGCGACAACAGTCTCTCTGGTACCATCCCTCATCAACTGAGCAATCTCCAAAAGAAATTTGCAGGCATGCCTTCATTGACCTACCTTGATATTTCTACGCAAGGTGATAATCTATATCATTCTGAATTCCCAGAAATTATATCTCAATGCCGGAACTTGACGTTCCTCAGCTTTTCTCAAAATAATTTGAATGGCCAAATTCCACCTTCGATAGGCCAACTCAGGGAGCTCCAGTACCTTGATCTTTCGTACAACTCCTTAAACTCATCAATCCCTCTCTCTATAGGCCAACTCAAGGAGCTCCATTACCTTGATCTTTCATACAACTCCTTAAACTCTTCTATCCCTTCTGAGCTTGGTCTTTGTACAAGCCTCACCCACTTGTACTTGGCTTCCAATAAACTCAACGGGGAGATTCCAAAGGAAGTTGGAAATATGAACTTTCTGTTGACGATCAATCTAAGAAGGAACCACTTGACAGGAGTGATCCCTCAGATACTAGGCAATTTAGCTCAGCTTGAGCTACTCGATTTGTCACACAACCATCTTTCAGGGCAATTCCCATCATTTGTCAACACGTTTTTTCCTATTGACTTTGATTTTTCTTATAACAACTTGACTGGCCCAATCCCATGCGTTTTCCAAAGGGCACCAGAAAATGCTTTTGTTGGAAACTCTGGCTTGTGTGGGTATGTAGGGTGTGTAGACAGTAATTCCGACAAGAGTAACAAAAGAGCTCTAATTGGTATCCTTGTGCCTGTTTGTGGCTTATTAATGGTTACAACTGTCATTGGTCTTATGTTCCGTAAAAAATCCAGTCTCGTTTTGAACAAAGTCAACACTTCTGAAAACTTTGAGAGTTTGGAGTCAATGATATTGCAAGAGGAAGTAAAATTTGGAACGGTTTATAAGGCAGAGCTGCAATCAGGCCAAGTTGTTGCAGTTAAAAGGCTTAACATGTCAGACTCTAATGATATTCTAGCAATCAATCTCCATAGCTTTCAAAATGAAATCCGAACTTTGACAAGCATCCGGCACCAGAACATCATAAGGCTCTATGGCTTCTGTTCAAGAAGGGGGGGTTGCATATTCCTGCTTTATGAATACTTAGAGAGAGGAAGCCTGGGAAAAGCTTTGTATGGAGTTGAAGGTGTTAATGAACTTGTCTGGGCTACTAGAGTCAAAATTGTGCAAGGACTTGCTCATGCACTTTCTTACTTGCACCATGATTGCTCTCCACCAATTGTGCACCGTGACATAACCGTCAACAATGTATTGCTTGAGTCTGATTTCGAGGTTCGTCTCTCAGATTTCAGAATAGCCAAGTTATTGAGTACTGATTCATCCAACTGGACAGATATTGCTGGTTCGTTTGGCTACATAGCACCAGAGCTTGCATACACTATGCGAGTCACGGATAAATGTGATGTATATAGCTTTGGAGTGGTGGCGCTCGAAGTCATGATGGGAAGGCACCCAGGGAATATGCTAGAGTCCCAGCTACAAGAATCATCAAAATCAAGGAGGGACAATGTAGAATTGCTCCTGAAAGATTTGTTAGACCAAAGGTTGGAGCCGCCAACCAATGAATTTGCAAAGGCAGTGGTGCTTGTAATGACAATGGCCTTGGCCTGTATACGAACGCTTCCTGCGTCCAGACCCACGATGTTATTTGCGGCACAAAAACTCTCAGCTCAAACCCTGCCTTGCCTTCCCGAACCATTTGGTATGTTGACAATCAACAAGCTAATGGCACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

729

Amino Acids

81.14

Weight (kDa)

6.36

Isoelectric Point (pI)

38.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 189 - 273 3.7e-08 Leucine-rich repeat region
Pkinase PF00069 440 - 698 1.3e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 440 - 699 1.5e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1035, 1335
AasI GACNNNNNNGTC 1 cut(s) 1688
Acc65I GGTACC 1 cut(s) 446
AccB1I GGYRCC 4 cut(s) 446, 1075, 1461, 1899
AccB7I CCANNNNNTGG 1 cut(s) 1996
AccI GTMKAC 3 cut(s) 307, 1131, 2062
AccII CGCG 1 cut(s) 429
AciI CCGC 3 cut(s) 427, 2003, 2102
AclWI GGATC 2 cut(s) 235, 907
AcoI YGGCCR 1 cut(s) 619
AcsI RAATTY 6 cut(s) 378, 482, 551, 624, 1319, 2015
AcuI CTGAAG 1 cut(s) 395
AfaI GTAC 7 cut(s) 23, 448, 662, 677, 793, 812, 1762
AfiI CCNNNNNNNGG 5 cut(s) 638, 649, 721, 1190, 1996
AflIII ACRYGT 2 cut(s) 1002, 1383
AgsI TTSAA 6 cut(s) 277, 616, 1255, 1430, 1497, 1574
AjnI CCWGG 4 cut(s) 332, 396, 1548, 1903
AjuI GAANNNNNNNTTGG 2 cut(s) 1305, 1337
Alw21I GWGCWC 4 cut(s) 657, 729, 1165, 1677
Alw26I GTCTC 4 cut(s) 196, 443, 1250, 1733
Alw44I GTGCAC 1 cut(s) 1673
AlwI GGATC 2 cut(s) 235, 907
AlwNI CAGNNNCTG 1 cut(s) 150
AoxI GGCC 7 cut(s) 619, 640, 712, 1048, 1354, 2049, 2055
ApaLI GTGCAC 1 cut(s) 1673
ApeKI GCWGC 1 cut(s) 1345
ApoI RAATTY 6 cut(s) 378, 482, 551, 624, 1319, 2015
AseI ATTAAT 1 cut(s) 1199
Asp718I GGTACC 1 cut(s) 446
AspLEI GCGC 1 cut(s) 1879
AspS9I GGNCC 2 cut(s) 126, 1049
AsuHPI GGTGA 5 cut(s) 78, 124, 259, 542, 793
AvaII GGWCC 1 cut(s) 126
BaeGI GKGCMC 2 cut(s) 1078, 1677
BalI TGGCCA 1 cut(s) 621
BanI GGYRCC 4 cut(s) 446, 1075, 1461, 1899
BanII GRGCYC 3 cut(s) 657, 729, 1165
BarI GAAGNNNNNNTAC 2 cut(s) 393, 425
Bbv12I GWGCWC 4 cut(s) 657, 729, 1165, 1677
BbvCI CCTCAGC 1 cut(s) 593
BbvI GCAGC 1 cut(s) 1332
BccI CCATC 7 cut(s) 97, 137, 391, 458, 978, 997, 1885
BceAI ACGGC 1 cut(s) 88
BcgI CGANNNNNNTGC 2 cut(s) 277, 311
BciT130I CCWGG 4 cut(s) 334, 398, 1550, 1905
BciVI GTATCC 1 cut(s) 1184
BclI TGATCA 2 cut(s) 46, 370
BcoDI GTCTC 4 cut(s) 196, 443, 1250, 1733
BfaI CTAG 4 cut(s) 926, 1406, 1602, 1916
BfmI CTRYAG 1 cut(s) 708
BfoI RGCGCY 1 cut(s) 1880
BfuI GTATCC 1 cut(s) 1184
BisI GCNGC 3 cut(s) 1346, 2003, 2103
BlpI GCTNAGC 1 cut(s) 939
BlsI GCNGC 3 cut(s) 1347, 2004, 2104
BmcAI AGTACT 1 cut(s) 1762
Bme1390I CCNGG 4 cut(s) 334, 398, 1550, 1905
Bme18I GGWCC 1 cut(s) 126
BmgT120I GGNCC 2 cut(s) 126, 1049
BmiI GGNNCC 6 cut(s) 448, 896, 1077, 1463, 1901, 2001
BmrFI CCNGG 4 cut(s) 334, 398, 1550, 1905
BmsI GCATC 1 cut(s) 1464
BoxI GACNNNNGTC 1 cut(s) 435
BpmI CTGGAG 2 cut(s) 316, 641
Bpu10I CCTNAGC 1 cut(s) 593
Bpu1102I GCTNAGC 1 cut(s) 939
BpuEI CTTGAG 3 cut(s) 704, 965, 1727
BsaJI CCNNGG 5 cut(s) 107, 1549, 1903, 1904, 2052
BsaXI ACNNNNNCTCC 2 cut(s) 644, 674
Bsc4I CCNNNNNNNGG 5 cut(s) 638, 649, 721, 1190, 1996
Bse1I ACTGG 5 cut(s) 161, 658, 1051, 1242, 1781
BseBI CCWGG 4 cut(s) 334, 398, 1550, 1905
BseDI CCNNGG 5 cut(s) 107, 1549, 1903, 1904, 2052
BseGI GGATG 3 cut(s) 450, 1455, 1769
BseLI CCNNNNNNNGG 5 cut(s) 638, 649, 721, 1190, 1996
BseMII CTCAG 8 cut(s) 455, 607, 661, 768, 932, 953, 1746, 2130
BseNI ACTGG 5 cut(s) 161, 658, 1051, 1242, 1781
BseSI GKGCMC 2 cut(s) 1078, 1677
BseXI GCAGC 1 cut(s) 1332
BseYI CCCAGC 1 cut(s) 1923
Bsh1236I CGCG 1 cut(s) 429
BshFI GGCC 7 cut(s) 621, 642, 714, 1050, 1356, 2051, 2057
BshNI GGYRCC 4 cut(s) 446, 1075, 1461, 1899
BsiHKAI GWGCWC 4 cut(s) 657, 729, 1165, 1677
BsiSI CCGG 2 cut(s) 577, 1459
BslFI GGGAC 2 cut(s) 1906, 1967
BslI CCNNNNNNNGG 5 cut(s) 638, 649, 721, 1190, 1996
BsmAI GTCTC 4 cut(s) 196, 443, 1250, 1733
BsmBI CGTCTC 1 cut(s) 1733
BsmFI GGGAC 2 cut(s) 1906, 1967
BsnI GGCC 7 cut(s) 621, 642, 714, 1050, 1356, 2051, 2057
Bsp1286I GDGCHC 5 cut(s) 657, 729, 1078, 1165, 1677
Bsp1407I TGTACA 1 cut(s) 791
Bsp143I GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
Bsp1720I GCTNAGC 1 cut(s) 939
BspACI CCGC 3 cut(s) 427, 2003, 2102
BspANI GGCC 7 cut(s) 621, 642, 714, 1050, 1356, 2051, 2057
BspCNI CTCAG 8 cut(s) 456, 606, 660, 769, 931, 952, 1745, 2129
BspFNI CGCG 1 cut(s) 429
BspHI TCATGA 1 cut(s) 1887
BspLI GGNNCC 6 cut(s) 448, 896, 1077, 1463, 1901, 2001
BspPI GGATC 2 cut(s) 235, 907
BspT107I GGYRCC 4 cut(s) 446, 1075, 1461, 1899
BsrGI TGTACA 1 cut(s) 791
BsrI ACTGG 5 cut(s) 161, 658, 1051, 1242, 1781
BssECI CCNNGG 5 cut(s) 107, 1549, 1903, 1904, 2052
BssMI GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
BssNAI GTATAC 2 cut(s) 308, 2063
BssT1I CCWWGG 2 cut(s) 107, 2052
Bst1107I GTATAC 2 cut(s) 308, 2063
Bst2UI CCWGG 4 cut(s) 334, 398, 1550, 1905
Bst6I CTCTTC 1 cut(s) 769
BstAUI TGTACA 1 cut(s) 791
BstC8I GCNNGC 3 cut(s) 490, 494, 1821
BstENI CCTNNNNNAGG 1 cut(s) 636
BstF5I GGATG 3 cut(s) 450, 1455, 1769
BstFNI CGCG 1 cut(s) 429
BstH2I RGCGCY 1 cut(s) 1880
BstHHI GCGC 1 cut(s) 1879
BstKTI GATC 7 cut(s) 49, 230, 373, 670, 742, 882, 915
BstMAI GTCTC 4 cut(s) 196, 443, 1250, 1733
BstMBI GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
BstNI CCWGG 4 cut(s) 334, 398, 1550, 1905
BstNSI RCATGY 2 cut(s) 496, 1387
BstPAI GACNNNNGTC 1 cut(s) 435
BstSCI CCNGG 4 cut(s) 332, 396, 1548, 1903
BstSFI CTRYAG 1 cut(s) 708
BstSLI GKGCMC 2 cut(s) 1078, 1677
BstUI CGCG 1 cut(s) 429
BstV1I GCAGC 1 cut(s) 1332
BstZ17I GTATAC 2 cut(s) 308, 2063
BsuI GTATCC 1 cut(s) 1184
BsuRI GGCC 7 cut(s) 621, 642, 714, 1050, 1356, 2051, 2057
BtsCI GGATG 3 cut(s) 450, 1455, 1769
BtsI GCAGTG 1 cut(s) 2034
BtsIMutI CAGTG 2 cut(s) 230, 2034
Cac8I GCNNGC 3 cut(s) 490, 494, 1821
CaiI CAGNNNCTG 1 cut(s) 150
CciI TCATGA 1 cut(s) 1887
CfoI GCGC 1 cut(s) 1879
Cfr13I GGNCC 2 cut(s) 126, 1049
CseI GACGC 1 cut(s) 2067
CsiI ACCWGGT 1 cut(s) 396
Csp6I GTAC 7 cut(s) 22, 447, 661, 676, 792, 811, 1761
CspCI CAANNNNNGTGG 2 cut(s) 2010, 2045
CviAII CATG 7 cut(s) 123, 493, 1059, 1384, 1631, 1652, 1888
CviQI GTAC 7 cut(s) 22, 447, 661, 676, 792, 811, 1761
DpnI GATC 7 cut(s) 48, 229, 372, 669, 741, 881, 914
DpnII GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
DrdI GACNNNNNNGTC 1 cut(s) 1688
DseDI GACNNNNNNGTC 1 cut(s) 1688
EaeI YGGCCR 1 cut(s) 619
Eam1104I CTCTTC 1 cut(s) 769
EarI CTCTTC 1 cut(s) 769
Ecl136II GAGCTC 3 cut(s) 655, 727, 1163
Eco130I CCWWGG 2 cut(s) 107, 2052
Eco24I GRGCYC 3 cut(s) 657, 729, 1165
Eco47I GGWCC 1 cut(s) 126
Eco53kI GAGCTC 3 cut(s) 655, 727, 1163
Eco57I CTGAAG 1 cut(s) 395
EcoICRI GAGCTC 3 cut(s) 655, 727, 1163
EcoNI CCTNNNNNAGG 1 cut(s) 636
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 4 cut(s) 332, 396, 1548, 1903
EcoT14I CCWWGG 2 cut(s) 107, 2052
EcoT38I GRGCYC 3 cut(s) 657, 729, 1165
ErhI CCWWGG 2 cut(s) 107, 2052
Esp3I CGTCTC 1 cut(s) 1733
FaeI CATG 7 cut(s) 126, 496, 1062, 1387, 1634, 1655, 1891
FalI AAGNNNNNCTT 2 cut(s) 59, 91
FaqI GGGAC 2 cut(s) 1906, 1967
FatI CATG 7 cut(s) 122, 492, 1058, 1383, 1630, 1651, 1887
FbaI TGATCA 2 cut(s) 46, 370
FblI GTMKAC 3 cut(s) 307, 1131, 2062
Fnu4HI GCNGC 3 cut(s) 1346, 2003, 2103
FokI GGATG 3 cut(s) 437, 1442, 1756
FriOI GRGCYC 3 cut(s) 657, 729, 1165
Fsp4HI GCNGC 3 cut(s) 1346, 2003, 2103
FspBI CTAG 4 cut(s) 926, 1406, 1602, 1916
GlaI GCGC 1 cut(s) 1878
GluI GCNGC 3 cut(s) 1346, 2003, 2103
GsaI CCCAGC 1 cut(s) 1927
GsuI CTGGAG 2 cut(s) 316, 641
HaeII RGCGCY 1 cut(s) 1880
HaeIII GGCC 7 cut(s) 621, 642, 714, 1050, 1356, 2051, 2057
HapII CCGG 2 cut(s) 577, 1459
HgaI GACGC 1 cut(s) 2067
HhaI GCGC 1 cut(s) 1879
Hin1II CATG 7 cut(s) 126, 496, 1062, 1387, 1634, 1655, 1891
Hin6I GCGC 1 cut(s) 1877
HinP1I GCGC 1 cut(s) 1877
HincII GTYRAC 5 cut(s) 876, 1000, 1264, 1693, 2160
HindII GTYRAC 5 cut(s) 876, 1000, 1264, 1693, 2160
HindIII AAGCTT 1 cut(s) 1557
HpaII CCGG 2 cut(s) 577, 1459
HphI GGTGA 5 cut(s) 78, 124, 259, 542, 793
Hpy188III TCNNGA 5 cut(s) 1497, 1888, 1972, 2082, 2141
HpyAV CCTTC 9 cut(s) 61, 507, 642, 783, 885, 1494, 1568, 1890, 2147
HpyCH4IV ACGT 2 cut(s) 587, 1004
HpySE526I ACGT 2 cut(s) 587, 1004
Hsp92II CATG 7 cut(s) 126, 496, 1062, 1387, 1634, 1655, 1891
HspAI GCGC 1 cut(s) 1877
KpnI GGTACC 1 cut(s) 450
Ksp22I TGATCA 2 cut(s) 46, 370
Kzo9I GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
LmnI GCTCC 7 cut(s) 179, 652, 660, 724, 732, 1974, 1999
Lsp1109I GCAGC 1 cut(s) 1332
LweI GCATC 1 cut(s) 1464
MabI ACCWGGT 1 cut(s) 396
MaeI CTAG 4 cut(s) 926, 1406, 1602, 1916
MaeII ACGT 2 cut(s) 587, 1004
MaeIII GTNAC 6 cut(s) 400, 960, 1151, 1204, 1679, 1837
MalI GATC 7 cut(s) 48, 229, 372, 669, 741, 881, 914
MboI GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
MboII GAAGA 3 cut(s) 72, 75, 756
MfeI CAATTG 1 cut(s) 1668
MhlI GDGCHC 5 cut(s) 657, 729, 1078, 1165, 1677
MlsI TGGCCA 1 cut(s) 621
MluNI TGGCCA 1 cut(s) 621
MlyI GAGTC 6 cut(s) 1301, 1385, 1614, 1718, 1845, 1928
MmeI TCCRAC 5 cut(s) 835, 1075, 1167, 1797, 1977
Mox20I TGGCCA 1 cut(s) 621
MscI TGGCCA 1 cut(s) 621
MseI TTAA 6 cut(s) 686, 758, 1199, 1371, 1380, 1581
Msp20I TGGCCA 1 cut(s) 621
MspI CCGG 2 cut(s) 577, 1459
MspR9I CCNGG 4 cut(s) 334, 398, 1550, 1905
MunI CAATTG 1 cut(s) 1668
MvaI CCWGG 4 cut(s) 334, 398, 1550, 1905
MvnI CGCG 1 cut(s) 429
NdeII GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
NlaIII CATG 7 cut(s) 126, 496, 1062, 1387, 1634, 1655, 1891
NlaIV GGNNCC 6 cut(s) 448, 896, 1077, 1463, 1901, 2001
NmuCI GTSAC 3 cut(s) 960, 1679, 1837
NspI RCATGY 2 cut(s) 496, 1387
PaeI GCATGC 1 cut(s) 496
PagI TCATGA 1 cut(s) 1887
PasI CCCWGGG 1 cut(s) 1904
PciI ACATGT 1 cut(s) 1383
PcsI WCGNNNNNNNCGW 1 cut(s) 2075
PfeI GAWTC 4 cut(s) 262, 841, 1766, 1934
PflMI CCANNNNNTGG 1 cut(s) 1996
PkrI GCNGC 3 cut(s) 1347, 2004, 2104
PleI GAGTC 6 cut(s) 1300, 1385, 1613, 1717, 1844, 1927
PpsI GAGTC 6 cut(s) 1300, 1385, 1613, 1717, 1844, 1927
PscI ACATGT 1 cut(s) 1383
PshAI GACNNNNGTC 1 cut(s) 435
PshBI ATTAAT 1 cut(s) 1199
PsiI TTATAA 2 cut(s) 1035, 1335
Psp124BI GAGCTC 3 cut(s) 657, 729, 1165
Psp6I CCWGG 4 cut(s) 332, 396, 1548, 1903
PspFI CCCAGC 1 cut(s) 1923
PspGI CCWGG 4 cut(s) 332, 396, 1548, 1903
PspN4I GGNNCC 6 cut(s) 448, 896, 1077, 1463, 1901, 2001
PspPI GGNCC 2 cut(s) 126, 1049
PstNI CAGNNNCTG 1 cut(s) 150
RsaI GTAC 7 cut(s) 23, 448, 662, 677, 793, 812, 1762
RsaNI GTAC 7 cut(s) 22, 447, 661, 676, 792, 811, 1761
SacI GAGCTC 3 cut(s) 657, 729, 1165
SaqAI TTAA 6 cut(s) 686, 758, 1199, 1371, 1380, 1581
SatI GCNGC 3 cut(s) 1346, 2003, 2103
Sau3AI GATC 7 cut(s) 46, 227, 370, 667, 739, 879, 912
Sau96I GGNCC 2 cut(s) 126, 1049
ScaI AGTACT 1 cut(s) 1762
SchI GAGTC 6 cut(s) 1301, 1385, 1614, 1718, 1845, 1928
ScrFI CCNGG 4 cut(s) 334, 398, 1550, 1905
SduI GDGCHC 5 cut(s) 657, 729, 1078, 1165, 1677
SexAI ACCWGGT 1 cut(s) 396
SfaNI GCATC 1 cut(s) 1464
SfcI CTRYAG 1 cut(s) 708
SinI GGWCC 1 cut(s) 126
SmlI CTYRAG 3 cut(s) 719, 944, 1706
SmoI CTYRAG 3 cut(s) 719, 944, 1706
SphI GCATGC 1 cut(s) 496
SsiI CCGC 3 cut(s) 427, 2003, 2102
SspMI CTAG 4 cut(s) 926, 1406, 1602, 1916
SstI GAGCTC 3 cut(s) 657, 729, 1165
StyD4I CCNGG 4 cut(s) 332, 396, 1548, 1903
StyI CCWWGG 2 cut(s) 107, 2052
TaiI ACGT 2 cut(s) 590, 1007
TaqI TCGA 6 cut(s) 101, 243, 635, 954, 1719, 1881
TatI WGTACW 4 cut(s) 21, 791, 810, 1760
TauI GCSGC 2 cut(s) 2005, 2105
TfiI GAWTC 4 cut(s) 262, 841, 1766, 1934
Tru1I TTAA 6 cut(s) 686, 758, 1199, 1371, 1380, 1581
Tru9I TTAA 6 cut(s) 686, 758, 1199, 1371, 1380, 1581
TscAI CASTG 2 cut(s) 237, 2034
TseFI GTSAC 3 cut(s) 960, 1679, 1837
TseI GCWGC 1 cut(s) 1345
Tsp45I GTSAC 3 cut(s) 960, 1679, 1837
TspDTI ATGAA 9 cut(s) 111, 489, 735, 878, 1449, 1542, 1599, 1758, 2028
TspGWI ACGGA 2 cut(s) 1220, 1856
TspRI CASTG 2 cut(s) 237, 2034
Van91I CCANNNNNTGG 1 cut(s) 1996
VneI GTGCAC 1 cut(s) 1673
VpaK11BI GGWCC 1 cut(s) 126
VspI ATTAAT 1 cut(s) 1199
XagI CCTNNNNNAGG 1 cut(s) 636
XapI RAATTY 6 cut(s) 378, 482, 551, 624, 1319, 2015
XceI RCATGY 2 cut(s) 496, 1387
XmiI GTMKAC 3 cut(s) 307, 1131, 2062
XspI CTAG 4 cut(s) 926, 1406, 1602, 1916
ZrmI AGTACT 1 cut(s) 1762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.