RLG00000032786

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19044471 .. 19048610
4140 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032786

Sequence Viewer

Length: 2586 bp
ATGTTGACCGCTGTGCGACTTCGTCCTCCTCACCCTCGTTCTTCAATCTTCACTCCTCAGTCCTCAGACTCCCTCGACTTCGTCCTTCAGTCCTTCACCCCTCAACAAGCCTTCGTTCTTCACTCCTCAGGACCTCAGCCAAGCCTTCGTTCTTCACTCCTCTGTCCTCATTCTAGTTCTAGTTCTAGTGAAGCAAAGGCCCTTCTAAAATGGAAAGCCAGTTTTCAAAACCAAACCCAGAATAACCTGACCTCATGGACTTACTCTCCCAGTAATTCCACCAATCCAAAAGCAAATGCAAGTCCATGCAATGGTTGGACAGGCATTACATGCAATACTGTTGGAAGTGTCAATAGGATAAACCTTAGCAATTCTGGCATTCAAGGTACGCTTCGTGAATTACCATTCTTGTCCTTCCCTAATCTTGAATATCTTGATCTTAGCTTCAATGAACTCAGTGGTTCCATTCCCCCTTCAATTGGTGGCTTGAGTAATTTAGTTTTCTTATACCTCCGTCATAATCAACTTTCTGGCTCCATCCCCCAAGAGATAGGGAATCTCAAGAAGTTGACTGTACTCAAGTTGGATACTAACCAACTTTCTGGTCATTTACCCCAAAATATTTGCCGTGGTGGATCACTGCAAAACTTTACAGTACAAACCAACCGATTGACCGGTCCAATCCCCAAAAGCTTGAAAATGTGCAAGAGTTTAATCAGAGTCCGCCTTCAAGATAACCATTTGACAGGCAACATATTTGAAGCATTTGGTGCCTATCCAAATCTTCGATATATAGACCTTAGCCACAACAACTTCTACGGTAAAATTTCACCCATGTGGGGACAATGTCCTCAGTTAACAGCCCTACGAATTGCAGGAAACATCCTAACTGGTAGCATACCACCTGAGCTTGGCAATGCAACGAAGATTCAGTTACTCGATCTTTCTTCAAATGGTTTAGTTGGAGTGATTCCAAATGAGATTGGGAGATTGACTTCTCTGTTGAATCTCACTTTGAATGGTAATCAACTTTGGGGTCGCATACCCTTAGAGTTTGGGTCATTCAAGGATCTTGAATATCTTGACATGTCAACCAACAAATTGAATGAGTCAATTCCAAGCATTTTAGGTGACCTTTCCAAATTACACTACTTGAATTTGAGCAATAACAAATTCAGCCAAGAAATTCCATTTCAATTGGGGAAATTAGTCCACCTGTCCCAGCTAGACTTGAGTTACAATTCACTTGAGGATCAAATACCATCAGAAATTAGCCAAATGCAAAGCTTGGAAATTCTGAATATTTCCCACAATAATCTTTCTGGTTCAATACCCAAAAATTTCGAACAAATGCATAGCTTGGTTCAAATTGACATATCCTACAACCAGTTGCAGGGTCCCGTCCCCAACAACAAAGCATTTCAAGATGGCGCTTTGGAAGGCAATGAAGGATTGTGTGGCAATGTTGCAGGACTTCAACCCTGCAATATTCCCACCATGGAAACTAAATCAGATAGAAGACACTTGTTTTTAATTGTTTTCCCTATTCTGGGAACACTTCTACTTGTACTTGTCGTCCTTGCAATTGCCTTGGTTGGAAAAAGAAGAAAAACAGAGCAGGAAAAAGAGCAGAGCAATGTGCAACACAAAAAAGTTTTTTCCATATCTGAATTCGATGGAAGAAGAATGTATGAAGAAATCATCAAGGCAACCAATGATTTTGATGCTCTATATTGCATCGGAAAGGGGGGATCCGGAAGTGTGTACAAGGCAAAGCTGCTATCCGGCAGCGTAGTTGCAGTGAAAAAACTCCACCCAATAATTGATGGTGAGGAGACATCTCGGAAGGAATTCCTTAACGAAATAAGTGCACTTCTAGAGATACGGCACCGGAACATTGTGAGTTTCCGTGGTTTCTGTTCACATGCTCATCACTCGTTTTTGGTCTATGACTACCTAGAAAAAGGTAGTTTGGCTTCAATCCTGAGCAAAGAATACGAAGCTAACAAACTGGACTGGAGCACAAGGGTGAGAATTGTAAAAGGTGTAGCTCATGCCCTCTCTGATATGCACCATGATTGCTCTCCCCCCATTGTGCATCGAGACATATCAAGCAACAACATACTGCTCGATTACGAATATGAGCCCGTTCTTTCAGACTTTGGCACGGCTAAGCTTTTAAATCCAGACTCATCGAATTGGACTGCCCCCGCAGGAACATATGGATATATAGCACCAGAGCTTGCTTATACAATGAAGGTTACCGAGAAATGTGATGTTTATAGCTTTGGGGTGCTGGCGCTAGAAGTGATAATGGGAAAGCAGCTGGCTGATTTCGTGTCCTCCTTTCCGACTCCATCCTCCAATGGGGACATATTGCTGAAGGATGTTTTGGACCAACGAATCCCCCCTCCTACACCGAAAATTGAGAATGAACTGATAACAATTGCTAGGCTAGCAATTGCATGCAAACATTCCCATCCACAATCTAGGCCAACAATGTACAAGGTTTCTCAAGTGTTGTCATCTCAACCTGCAAATTCCTCTAGACTACCAGAGATTACTCTGGAACAACTCATTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

862

Amino Acids

95.17

Weight (kDa)

7.88

Isoelectric Point (pI)

45.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 117 - 176 5.4e-08 Leucine rich repeat
LRR_14 PF23598 134 - 268 2.6e-08 Leucine-rich repeat region
LRR_14 PF23598 259 - 382 7.3e-06 Leucine-rich repeat region
LRR_14 PF23598 354 - 459 6.1e-11 Leucine-rich repeat region
LRR_8 PF13855 405 - 464 8.8e-09 Leucine rich repeat
Pkinase PF00069 579 - 837 2.2e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 580 - 840 4e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2542
AccB1I GGYRCC 2 cut(s) 770, 1887
AccB7I CCANNNNNTGG 1 cut(s) 311
AccIII TCCGGA 1 cut(s) 1754
AciI CCGC 3 cut(s) 9, 724, 2211
AclWI GGATC 5 cut(s) 643, 1077, 1260, 1746, 1759
AcsI RAATTY 9 cut(s) 825, 1156, 1172, 1185, 1293, 1339, 1670, 1850, 2539
AcuI CTGAAG 2 cut(s) 71, 2402
AfaI GTAC 6 cut(s) 388, 576, 657, 1569, 1766, 2504
AfiI CCNNNNNNNGG 8 cut(s) 311, 479, 839, 911, 1393, 1549, 1550, 2367
AflIII ACRYGT 1 cut(s) 1086
AgeI ACCGGT 1 cut(s) 674
AjuI GAANNNNNNNTTGG 4 cut(s) 133, 165, 2375, 2407
AleI CACNNNNGTG 2 cut(s) 835, 2027
Alw21I GWGCWC 2 cut(s) 1873, 2024
Alw26I GTCTC 2 cut(s) 1829, 2097
Alw44I GTGCAC 1 cut(s) 1869
AlwI GGATC 5 cut(s) 643, 1077, 1260, 1746, 1759
Aor13HI TCCGGA 1 cut(s) 1754
AoxI GGCC 2 cut(s) 198, 2492
ApaLI GTGCAC 1 cut(s) 1869
ApeKI GCWGC 3 cut(s) 1777, 1788, 2323
ApoI RAATTY 9 cut(s) 825, 1156, 1172, 1185, 1293, 1339, 1670, 1850, 2539
AsiGI ACCGGT 1 cut(s) 674
Asp700I GAANNNNTTC 1 cut(s) 1850
AspLEI GCGC 2 cut(s) 1433, 2302
AspS9I GGNCC 5 cut(s) 131, 199, 677, 1397, 2395
AsuHPI GGTGA 6 cut(s) 23, 88, 822, 1142, 1841, 2041
AsuII TTCGAA 1 cut(s) 1344
AsuNHI GCTAGC 1 cut(s) 2455
AvaII GGWCC 4 cut(s) 131, 677, 1397, 2395
AxyI CCTNAGG 1 cut(s) 127
BaeGI GKGCMC 1 cut(s) 1873
BamHI GGATCC 1 cut(s) 1751
BanI GGYRCC 2 cut(s) 770, 1887
BanII GRGCYC 1 cut(s) 2148
BarI GAAGNNNNNNTAC 2 cut(s) 1960, 1992
BbsI GAAGAC 1 cut(s) 1525
Bbv12I GWGCWC 2 cut(s) 1873, 2024
BbvCI CCTCAGC 1 cut(s) 135
BbvI GCAGC 3 cut(s) 1764, 1800, 2335
BccI CCATC 7 cut(s) 545, 1270, 1421, 1670, 1820, 2365, 2487
BceAI ACGGC 3 cut(s) 612, 1901, 2184
BcgI CGANNNNNNTGC 2 cut(s) 1850, 1884
BciVI GTATCC 1 cut(s) 580
BcoDI GTCTC 2 cut(s) 1829, 2097
BfoI RGCGCY 2 cut(s) 1434, 2303
BfuAI ACCTGC 1 cut(s) 2542
BfuI GTATCC 1 cut(s) 580
BisI GCNGC 3 cut(s) 1778, 1789, 2324
BlpI GCTNAGC 1 cut(s) 2172
BlsI GCNGC 3 cut(s) 1779, 1790, 2325
Bme18I GGWCC 4 cut(s) 131, 677, 1397, 2395
BmgT120I GGNCC 5 cut(s) 131, 199, 677, 1397, 2395
BmiI GGNNCC 7 cut(s) 463, 535, 772, 1398, 1399, 1753, 1889
BmrI ACTGGG 1 cut(s) 264
BmsI GCATC 3 cut(s) 1714, 1746, 2107
BmtI GCTAGC 1 cut(s) 2459
BmuI ACTGGG 1 cut(s) 264
BpiI GAAGAC 1 cut(s) 1525
BpmI CTGGAG 1 cut(s) 2038
Bpu10I CCTNAGC 5 cut(s) 135, 365, 800, 906, 1985
Bpu1102I GCTNAGC 1 cut(s) 2172
Bpu14I TTCGAA 1 cut(s) 1344
BpuEI CTTGAG 6 cut(s) 508, 545, 563, 1252, 1268, 2499
BsaJI CCNNGG 4 cut(s) 628, 1497, 1590, 1909
BsaWI WCCGGW 3 cut(s) 674, 1754, 1890
BsaXI ACNNNNNCTCC 2 cut(s) 250, 280
Bsc4I CCNNNNNNNGG 8 cut(s) 311, 479, 839, 911, 1393, 1549, 1550, 2367
Bse118I RCCGGY 1 cut(s) 674
Bse1I ACTGG 6 cut(s) 219, 270, 895, 1387, 2016, 2021
Bse21I CCTNAGG 1 cut(s) 127
Bse3DI GCAATG 5 cut(s) 316, 922, 1450, 1468, 1642
BseAI TCCGGA 1 cut(s) 1754
BseDI CCNNGG 4 cut(s) 628, 1497, 1590, 1909
BseGI GGATG 5 cut(s) 537, 882, 2357, 2392, 2479
BseLI CCNNNNNNNGG 8 cut(s) 311, 479, 839, 911, 1393, 1549, 1550, 2367
BseMI GCAATG 5 cut(s) 316, 922, 1450, 1468, 1642
BseMII CTCAG 8 cut(s) 71, 78, 141, 149, 469, 866, 897, 1976
BseNI ACTGG 6 cut(s) 219, 270, 895, 1387, 2016, 2021
BseRI GAGGAG 5 cut(s) 18, 45, 115, 149, 1847
BseSI GKGCMC 1 cut(s) 1873
BseXI GCAGC 3 cut(s) 1764, 1800, 2335
BseYI CCCAGC 1 cut(s) 1221
BshFI GGCC 2 cut(s) 200, 2494
BshNI GGYRCC 2 cut(s) 770, 1887
BshTI ACCGGT 1 cut(s) 674
BsiHKAI GWGCWC 2 cut(s) 1873, 2024
BsiSI CCGG 4 cut(s) 675, 1755, 1785, 1891
BslFI GGGAC 5 cut(s) 855, 1204, 1383, 1388, 2384
BslI CCNNNNNNNGG 8 cut(s) 311, 479, 839, 911, 1393, 1549, 1550, 2367
BsmAI GTCTC 2 cut(s) 1829, 2097
BsmFI GGGAC 5 cut(s) 855, 1204, 1383, 1388, 2384
BsmI GAATGC 1 cut(s) 378
BsnI GGCC 2 cut(s) 200, 2494
Bsp119I TTCGAA 1 cut(s) 1344
Bsp1286I GDGCHC 3 cut(s) 1873, 2024, 2148
Bsp13I TCCGGA 1 cut(s) 1754
Bsp1407I TGTACA 2 cut(s) 1764, 2502
Bsp143I GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
Bsp1720I GCTNAGC 1 cut(s) 2172
Bsp19I CCATGG 1 cut(s) 1497
BspACI CCGC 3 cut(s) 9, 724, 2211
BspANI GGCC 2 cut(s) 200, 2494
BspCNI CTCAG 8 cut(s) 70, 77, 140, 148, 468, 865, 898, 1977
BspEI TCCGGA 1 cut(s) 1754
BspLI GGNNCC 7 cut(s) 463, 535, 772, 1398, 1399, 1753, 1889
BspMI ACCTGC 1 cut(s) 2542
BspOI GCTAGC 1 cut(s) 2459
BspPI GGATC 5 cut(s) 643, 1077, 1260, 1746, 1759
BspT104I TTCGAA 1 cut(s) 1344
BspT107I GGYRCC 2 cut(s) 770, 1887
BsrDI GCAATG 5 cut(s) 316, 922, 1450, 1468, 1642
BsrFI RCCGGY 1 cut(s) 674
BsrGI TGTACA 2 cut(s) 1764, 2502
BsrI ACTGG 6 cut(s) 219, 270, 895, 1387, 2016, 2021
BssAI RCCGGY 1 cut(s) 674
BssECI CCNNGG 4 cut(s) 628, 1497, 1590, 1909
BssMI GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
BssT1I CCWWGG 2 cut(s) 1497, 1590
Bst4CI ACNGT 4 cut(s) 340, 574, 655, 821
BstAPI GCANNNNNTGC 2 cut(s) 330, 770
BstAUI TGTACA 2 cut(s) 1764, 2502
BstBI TTCGAA 1 cut(s) 1344
BstC8I GCNNGC 5 cut(s) 2244, 2298, 2328, 2457, 2467
BstDSI CCRYGG 3 cut(s) 628, 1497, 1909
BstEII GGTNACC 2 cut(s) 1130, 2260
BstF5I GGATG 5 cut(s) 537, 882, 2357, 2392, 2479
BstH2I RGCGCY 2 cut(s) 1434, 2303
BstHHI GCGC 2 cut(s) 1433, 2302
BstKTI GATC 6 cut(s) 439, 638, 943, 1072, 1255, 1754
BstMAI GTCTC 2 cut(s) 1829, 2097
BstMBI GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
BstMWI GCNNNNNNNGC 4 cut(s) 330, 375, 770, 2456
BstNSI RCATGY 4 cut(s) 333, 1090, 1928, 2469
BstPI GGTNACC 2 cut(s) 1130, 2260
BstSLI GKGCMC 1 cut(s) 1873
BstV1I GCAGC 3 cut(s) 1764, 1800, 2335
BstV2I GAAGAC 1 cut(s) 1525
BstX2I RGATCY 2 cut(s) 1069, 1751
BstXI CCANNNNNNTGG 1 cut(s) 602
BstYI RGATCY 2 cut(s) 1069, 1751
Bsu36I CCTNAGG 1 cut(s) 127
BsuI GTATCC 1 cut(s) 580
BsuRI GGCC 2 cut(s) 200, 2494
BtgI CCRYGG 3 cut(s) 628, 1497, 1909
BtsCI GGATG 5 cut(s) 537, 882, 2357, 2392, 2479
BtsI GCAGTG 2 cut(s) 638, 1806
BtsIMutI CAGTG 3 cut(s) 463, 638, 1806
BveI ACCTGC 1 cut(s) 2542
Cac8I GCNNGC 5 cut(s) 2244, 2298, 2328, 2457, 2467
CfoI GCGC 2 cut(s) 1433, 2302
Cfr10I RCCGGY 1 cut(s) 674
Cfr13I GGNCC 5 cut(s) 131, 199, 677, 1397, 2395
Csp6I GTAC 6 cut(s) 387, 575, 656, 1568, 1765, 2503
CspAI ACCGGT 1 cut(s) 674
CviQI GTAC 6 cut(s) 387, 575, 656, 1568, 1765, 2503
DpnI GATC 6 cut(s) 438, 637, 942, 1071, 1254, 1753
DpnII GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
DraI TTTAAA 1 cut(s) 2181
EciI GGCGGA 1 cut(s) 713
Eco130I CCWWGG 2 cut(s) 1497, 1590
Eco24I GRGCYC 1 cut(s) 2148
Eco47I GGWCC 4 cut(s) 131, 677, 1397, 2395
Eco57I CTGAAG 2 cut(s) 71, 2402
Eco81I CCTNAGG 1 cut(s) 127
Eco91I GGTNACC 2 cut(s) 1130, 2260
EcoO109I RGGNCCY 3 cut(s) 131, 199, 1397
EcoO65I GGTNACC 2 cut(s) 1130, 2260
EcoRI GAATTC 2 cut(s) 1670, 1850
EcoT14I CCWWGG 2 cut(s) 1497, 1590
EcoT22I ATGCAT 1 cut(s) 1356
EcoT38I GRGCYC 1 cut(s) 2148
ErhI CCWWGG 2 cut(s) 1497, 1590
FalI AAGNNNNNCTT 2 cut(s) 375, 407
FaqI GGGAC 5 cut(s) 855, 1204, 1383, 1388, 2384
FauI CCCGC 1 cut(s) 2218
FauNDI CATATG 1 cut(s) 2221
Fnu4HI GCNGC 3 cut(s) 1778, 1789, 2324
FokI GGATG 5 cut(s) 524, 869, 2344, 2399, 2466
FriOI GRGCYC 1 cut(s) 2148
Fsp4HI GCNGC 3 cut(s) 1778, 1789, 2324
GlaI GCGC 2 cut(s) 1432, 2301
GluI GCNGC 3 cut(s) 1778, 1789, 2324
GsaI CCCAGC 1 cut(s) 1225
GsuI CTGGAG 1 cut(s) 2038
HaeII RGCGCY 2 cut(s) 1434, 2303
HaeIII GGCC 2 cut(s) 200, 2494
HapII CCGG 4 cut(s) 675, 1755, 1785, 1891
HhaI GCGC 2 cut(s) 1433, 2302
Hin6I GCGC 2 cut(s) 1431, 2300
HinP1I GCGC 2 cut(s) 1431, 2300
HincII GTYRAC 4 cut(s) 6, 570, 858, 1092
HindII GTYRAC 4 cut(s) 6, 570, 858, 1092
HindIII AAGCTT 3 cut(s) 691, 1285, 2174
HpaI GTTAAC 1 cut(s) 858
HpaII CCGG 4 cut(s) 675, 1755, 1785, 1891
HphI GGTGA 6 cut(s) 23, 88, 822, 1142, 1841, 2041
Hpy166II GTNNAC 8 cut(s) 6, 570, 858, 1092, 1213, 1765, 1871, 1922
Hpy8I GTNNAC 8 cut(s) 6, 570, 858, 1092, 1213, 1765, 1871, 1922
HpyCH4III ACNGT 4 cut(s) 340, 574, 655, 821
HpyF10VI GCNNNNNNNGC 4 cut(s) 330, 375, 770, 2456
HspAI GCGC 2 cut(s) 1431, 2300
KflI GGGWCCC 1 cut(s) 1397
Kpn2I TCCGGA 1 cut(s) 1754
KspAI GTTAAC 1 cut(s) 858
Kzo9I GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
LmnI GCTCC 2 cut(s) 539, 2019
Lsp1109I GCAGC 3 cut(s) 1764, 1800, 2335
LweI GCATC 3 cut(s) 1714, 1746, 2107
MaeIII GTNAC 4 cut(s) 933, 1130, 1235, 2260
MalI GATC 6 cut(s) 438, 637, 942, 1071, 1254, 1753
MboI GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
MfeI CAATTG 5 cut(s) 477, 1196, 1584, 2445, 2460
MflI RGATCY 2 cut(s) 1069, 1751
MhlI GDGCHC 3 cut(s) 1873, 2024, 2148
MlyI GAGTC 5 cut(s) 62, 729, 1118, 2183, 2347
MmeI TCCRAC 6 cut(s) 296, 322, 564, 943, 1576, 2375
Mph1103I ATGCAT 1 cut(s) 1356
MroI TCCGGA 1 cut(s) 1754
MroXI GAANNNNTTC 1 cut(s) 1850
MseI TTAA 5 cut(s) 713, 857, 1532, 1857, 2180
MslI CAYNNNNRTG 2 cut(s) 835, 2027
MspA1I CMGCKG 2 cut(s) 11, 2326
MspI CCGG 4 cut(s) 675, 1755, 1785, 1891
MunI CAATTG 5 cut(s) 477, 1196, 1584, 2445, 2460
Mva1269I GAATGC 1 cut(s) 378
MwoI GCNNNNNNNGC 4 cut(s) 330, 375, 770, 2456
NcoI CCATGG 1 cut(s) 1497
NdeI CATATG 1 cut(s) 2221
NdeII GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
NheI GCTAGC 1 cut(s) 2455
NlaIV GGNNCC 7 cut(s) 463, 535, 772, 1398, 1399, 1753, 1889
NmuCI GTSAC 1 cut(s) 1130
NsiI ATGCAT 1 cut(s) 1356
NspI RCATGY 4 cut(s) 333, 1090, 1928, 2469
NspV TTCGAA 1 cut(s) 1344
OliI CACNNNNGTG 2 cut(s) 835, 2027
PaeI GCATGC 1 cut(s) 2469
PciI ACATGT 1 cut(s) 1086
PctI GAATGC 1 cut(s) 378
PdmI GAANNNNTTC 1 cut(s) 1850
PfeI GAWTC 5 cut(s) 556, 928, 970, 1006, 2403
PflFI GACNNNGTC 3 cut(s) 21, 80, 846
PflMI CCANNNNNTGG 1 cut(s) 311
PinAI ACCGGT 1 cut(s) 674
PkrI GCNGC 3 cut(s) 1779, 1790, 2325
PleI GAGTC 5 cut(s) 62, 728, 1117, 2183, 2347
PpsI GAGTC 5 cut(s) 62, 728, 1117, 2183, 2347
PpuMI RGGWCCY 2 cut(s) 131, 1397
PscI ACATGT 1 cut(s) 1086
Psp5II RGGWCCY 2 cut(s) 131, 1397
PspEI GGTNACC 2 cut(s) 1130, 2260
PspFI CCCAGC 1 cut(s) 1221
PspN4I GGNNCC 7 cut(s) 463, 535, 772, 1398, 1399, 1753, 1889
PspPI GGNCC 5 cut(s) 131, 199, 677, 1397, 2395
PspPPI RGGWCCY 2 cut(s) 131, 1397
PsuI RGATCY 2 cut(s) 1069, 1751
PsyI GACNNNGTC 3 cut(s) 21, 80, 846
PvuII CAGCTG 1 cut(s) 2326
RsaI GTAC 6 cut(s) 388, 576, 657, 1569, 1766, 2504
RsaNI GTAC 6 cut(s) 387, 575, 656, 1568, 1765, 2503
RseI CAYNNNNRTG 2 cut(s) 835, 2027
SaqAI TTAA 5 cut(s) 713, 857, 1532, 1857, 2180
SatI GCNGC 3 cut(s) 1778, 1789, 2324
Sau3AI GATC 6 cut(s) 436, 635, 940, 1069, 1252, 1751
Sau96I GGNCC 5 cut(s) 131, 199, 677, 1397, 2395
SchI GAGTC 5 cut(s) 62, 729, 1118, 2183, 2347
SduI GDGCHC 3 cut(s) 1873, 2024, 2148
SfaNI GCATC 3 cut(s) 1714, 1746, 2107
SfuI TTCGAA 1 cut(s) 1344
SinI GGWCC 4 cut(s) 131, 677, 1397, 2395
SmiMI CAYNNNNRTG 2 cut(s) 835, 2027
SmlI CTYRAG 6 cut(s) 487, 560, 578, 1231, 1247, 2514
SmoI CTYRAG 6 cut(s) 487, 560, 578, 1231, 1247, 2514
SphI GCATGC 1 cut(s) 2469
SsiI CCGC 3 cut(s) 9, 724, 2211
SspI AATATT 3 cut(s) 622, 1303, 1489
StyI CCWWGG 2 cut(s) 1497, 1590
TaaI ACNGT 4 cut(s) 340, 574, 655, 821
TaqI TCGA 8 cut(s) 75, 787, 939, 1344, 1674, 2101, 2130, 2195
TatI WGTACW 5 cut(s) 574, 655, 1567, 1764, 2502
TfiI GAWTC 5 cut(s) 556, 928, 970, 1006, 2403
Tru1I TTAA 5 cut(s) 713, 857, 1532, 1857, 2180
Tru9I TTAA 5 cut(s) 713, 857, 1532, 1857, 2180
TscAI CASTG 3 cut(s) 463, 645, 1806
TseFI GTSAC 1 cut(s) 1130
TseI GCWGC 3 cut(s) 1777, 1788, 2323
Tsp45I GTSAC 1 cut(s) 1130
TspDTI ATGAA 5 cut(s) 465, 1461, 1707, 2270, 2448
TspGWI ACGGA 2 cut(s) 503, 1898
TspRI CASTG 3 cut(s) 463, 645, 1806
Tth111I GACNNNGTC 3 cut(s) 21, 80, 846
Van91I CCANNNNNTGG 1 cut(s) 311
VneI GTGCAC 1 cut(s) 1869
VpaK11BI GGWCC 4 cut(s) 131, 677, 1397, 2395
XapI RAATTY 9 cut(s) 825, 1156, 1172, 1185, 1293, 1339, 1670, 1850, 2539
XbaI TCTAGA 2 cut(s) 1876, 2546
XceI RCATGY 4 cut(s) 333, 1090, 1928, 2469
XcmI CCANNNNNNNNNTGG 1 cut(s) 312
XmnI GAANNNNTTC 1 cut(s) 1850
Zsp2I ATGCAT 1 cut(s) 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.