pycom09g07250

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
5448899 .. 5451801
2903 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g07250.2

Sequence Viewer

Length: 2808 bp
ATGAAGAAATCCTCACAACTTAAAATTATGGCATCCAAAGAAGAAAAAGCACTTTCTCCCAAAGCTGCTTATTCACAGAATTCACTTCAAGTCATCCGAATTATACTCATTCTCATGTTGGTTTCTTCAGCTTCAACAGCAACAGCAGGACAAGAAGCAGAAGCACTTCTGAATTGGAAAGCTAGCCTTGACAACAACAAAAGCCTCTCTCTCTTGCCTTCATGGATTGGAAACAGCACATGCAATTGGGAAGGAATTTCTTGTAACAATTTTGGAAGCATAACCCAAATAAACCTCACTTCTTCTGGCTTAAGAGGTACACTTCTTGATTTTGGTTTCTCATCTTTTCCAAGTCTCATGAGCCTTAATCTGAGCCACAACACGATTTTCGGAACAATCCCATTGGAGATAGGGTTTTTGAAAAGCCTTCGAACCCTTGATCGTACCGGAAACAAAATTAATGGATCCATTCCCCATGAAGTTGGAATGTTAGGCAACTTAACCTTTCTTTCCCTTCATGACAACAAACTATCTGGAAATTTCCCAATAGAAATATGCATGCTGAGTTCGCTCAGTGTGCTTGATGTAGGAATAAACAATCTCACGGGTTCAATTCCAGAAGAAATCGGAAACCTGTCCAGCTTAACTTTTCTGGCCCTGGGTGGCAACAATTTCTCCGGCTCAATTCCTTCCACTATAGGCAACCTGACCAGGCTCAAGGTGTTATATCTGATGGCGAATCAATTAAGTGGAAGTATCCCACCTGAAGTAGGAAAGCTCAAATTTATTACTGATCTAGGATTGGTGGATAACCAACTCAATGGCTCCCTTCCTTCAGAAATGAATAATTTTACATTTCTGAAGGAGTTGTGGTTGAGCAACAACAACTTTTCTGGCAGAATTCCACAAGGCATATGCATCGGCGGAGTACTTGAAACGTTTACAGCACACAACAATCAGTTCACAGGCCTCATGCCTGGAAGCTTGAGGAACTGCACCAGCTTAGTTCGATTGAGGCTTGAGAGGAACCAGCTGACAGCAAACATAGCGCAAGAATTTGGCATTTATCCAAAGCTAACTTATGTCGATTTGAGTTACAACAGATTTTATGGGGAGCTTTCTGAGAACTGGGGCCAGTGCCAAAACTTACAAAGCTTGAGGCTCAGCAACAACAGAATTTCCGGGGGAGTTCCACGGTTTGAGGGATCAATGCAGCTGCATGTGCTTGTCCTCTCTTCAAATAATCTCACAGGGACAGTCCCGATTGAACTAGGGAGGTTGACATTAATGTTCAACCTTAACCTTGGTGATAACAAACTTTCAGGTAGCGTGCCTGCGGAGATTGGAATGCTAACCAATCTACAACATCTTAACTTAGCTGCCAATGATTTCAGTGGAACAATTCCTAAACAATTAGACAGGTGCAGAGAATTGTTGAACTTGAATTTGAGCAGAAACAGATTTGGTGGCAGCATTCCTCCTGAAATGAGCAGCATAGACTCTCTTCAAGTTCTTGATCTGAGTCAAAATTCACTGATGAGTGACATCCCACCGCAGCTTGGGAATTTGATGAAGTTGGAAGCCTTGAATCTCTCCCACAATGAGCTCTCTGGTTCGATCCCATCCACATTCGATAACATGTTGAGCTTGACAGTTGTTGACATATCATACAATCATTTGGAAGGTCCTCTTCCCAACAACAAAGCATTCCGCGAGGCTTCGGCTCTAGCTTTTGTGAATAACGCAGGCTTGTGTGGCAATGCCACCGGTTTGAATGTTTGTCCGTCCGAAACAAGAGGGGAGAAAAAGAGCAGCAAATCGGTTATCTTCATTGTACTACTTGTTTTAGGCATCCTGTTTTTTGCATTTTTTGTTACTGGGATTCTTTGCGTGGTCTACTATCCACGGGAAGCACAATTAAATGAAGACCAATTTGCGGTTTGGAGCTATGATGGAAGACTTCAGTTTGAAGACATCATTGAAGCCACAGAGGAATTCAACTCCAAATATTGTGTGGGGGTGGGAGGCAATGCAAGTGTTTACAAAGCTGAGCTCCCAACAGGCCGGATTGTTGCGGTGAAGAAACTTCACATGCTGCAGGACAGGGGAGTGGCAAATCTCAAGGCTTTCGAGAGTGAGGTTCGTGCTCTTACAGAAATCCGTCACAGAAACATTTTAAAGCTTTATGGTTTCTGTTCGCATCCGCAGCATCCTCTTTTGTTGTACGATTTTGTAGAAGGAGGAAGCTTGGAAAACATACTGACCGACGAAAACCATGCGGTTAAGTTTGGATGGATCGAGAGGGTGAATGTTGTCAAGGATGTTGCTAATGCATTGTCTTATATGCATCATGATTGTTCACCTCCTATAGTACATCGAGACATTTCGAGTAAGAACATCTTGCTGGATTTGGAATATGGGGCTTATGTCTCTGATTTTGGTACAGCTAAGCTCTTGAATCTTGAGACTTCAAATTGGACTTCGTTTGCAGGCACATTTGGATATAGTGCTCCAGACACGATGGAAGTGAACGAGAAATGCGATGTTTATAGCTTTGGAGTGGTAGCACTAGAAGTGATCATGGGAAAGCATCCCGGAGACCTCCTCTCCTATTTTTTGTCATTGTCATTAACATCAACACCCGAACCTATACAACTGAACGACGTCTTAGACAAGAGCCTCCCGCCTCCTGGAAATCATGTTGTCAACAAGGTGATCACCGTTGCAAACCTTGCATTTGCGTGCTTGCGAACGAATCCACAATCTCGACCGACCATGCAACAAATTTCCCGCGAGTTGTTATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

936

Amino Acids

102.46

Weight (kDa)

5.89

Isoelectric Point (pI)

35.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2667
AccI GTMKAC 1 cut(s) 1896
AccII CGCG 2 cut(s) 1713, 2793
AclI AACGTT 1 cut(s) 938
AclWI GGATC 5 cut(s) 459, 472, 1213, 1612, 2303
AcuI CTGAAG 5 cut(s) 111, 786, 819, 881, 1946
AcyI GRCGYC 1 cut(s) 2664
AfaI GTAC 7 cut(s) 319, 445, 930, 1836, 2225, 2373, 2443
AfiI CCNNNNNNNGG 4 cut(s) 770, 1559, 1936, 2690
AflII CTTAAG 1 cut(s) 310
AflIII ACRYGT 1 cut(s) 1638
AgeI ACCGGT 1 cut(s) 1766
AjnI CCWGG 4 cut(s) 657, 710, 976, 2689
Alw21I GWGCWC 4 cut(s) 1608, 2055, 2149, 2512
Alw26I GTCTC 5 cut(s) 359, 2373, 2434, 2459, 2592
AlwI GGATC 5 cut(s) 459, 472, 1213, 1612, 2303
AoxI GGCC 4 cut(s) 654, 967, 1132, 2062
AseI ATTAAT 2 cut(s) 459, 1286
AsiGI ACCGGT 1 cut(s) 1766
Asp700I GAANNNNTTC 1 cut(s) 165
AspLEI GCGC 1 cut(s) 1051
AspS9I GGNCC 3 cut(s) 655, 1132, 1685
AsuC2I CCSGG 2 cut(s) 1183, 2595
AsuHPI GGTGA 6 cut(s) 1319, 2089, 2317, 2352, 2710, 2725
AsuII TTCGAA 1 cut(s) 430
AsuNHI GCTAGC 1 cut(s) 182
AvaII GGWCC 1 cut(s) 1685
BamHI GGATCC 1 cut(s) 464
BanII GRGCYC 2 cut(s) 1608, 2055
BbsI GAAGAC 3 cut(s) 1932, 1963, 1977
Bbv12I GWGCWC 4 cut(s) 1608, 2055, 2149, 2512
BccI CCATC 5 cut(s) 727, 1630, 1946, 2286, 2515
BcgI CGANNNNNNTGC 4 cut(s) 901, 935, 2258, 2292
BciT130I CCWGG 4 cut(s) 659, 712, 978, 2691
BciVI GTATCC 1 cut(s) 767
BclI TGATCA 2 cut(s) 2577, 2715
BcnI CCSGG 2 cut(s) 1183, 2595
BcoDI GTCTC 5 cut(s) 359, 2373, 2434, 2459, 2592
BfaI CTAG 5 cut(s) 183, 797, 1271, 1727, 2570
BfmI CTRYAG 3 cut(s) 696, 2096, 2367
BfrI CTTAAG 1 cut(s) 310
BfuI GTATCC 1 cut(s) 767
BlpI GCTNAGC 3 cut(s) 1163, 2049, 2448
BmcAI AGTACT 1 cut(s) 930
Bme1390I CCNGG 6 cut(s) 659, 712, 978, 1183, 2595, 2691
Bme18I GGWCC 1 cut(s) 1685
BmgT120I GGNCC 3 cut(s) 655, 1132, 1685
BmiI GGNNCC 4 cut(s) 466, 826, 1028, 1133
BmrFI CCNGG 6 cut(s) 659, 712, 978, 1183, 2595, 2691
BmrI ACTGGG 2 cut(s) 1138, 1887
BmsI GCATC 7 cut(s) 41, 927, 1860, 2209, 2218, 2356, 2599
BmtI GCTAGC 1 cut(s) 186
BmuI ACTGGG 2 cut(s) 1138, 1887
BpiI GAAGAC 3 cut(s) 1932, 1963, 1977
BplI GAGNNNNNCTC 2 cut(s) 2589, 2621
BpmI CTGGAG 1 cut(s) 2496
Bpu1102I GCTNAGC 3 cut(s) 1163, 2049, 2448
Bpu14I TTCGAA 1 cut(s) 430
BpuEI CTTGAG 6 cut(s) 701, 1006, 1040, 1177, 2105, 2483
BpuMI CCSGG 2 cut(s) 1183, 2595
BsaHI GRCGYC 1 cut(s) 2664
BsaI GGTCTC 1 cut(s) 2592
BsaJI CCNNGG 6 cut(s) 657, 658, 1182, 1193, 1303, 1904
BsaWI WCCGGW 2 cut(s) 446, 1766
BsaXI ACNNNNNCTCC 8 cut(s) 398, 428, 659, 689, 857, 887, 2591, 2621
Bsc4I CCNNNNNNNGG 4 cut(s) 770, 1559, 1936, 2690
Bse118I RCCGGY 1 cut(s) 1766
Bse1I ACTGG 3 cut(s) 1133, 1135, 1882
Bse3DI GCAATG 2 cut(s) 1765, 2035
BseBI CCWGG 4 cut(s) 659, 712, 978, 2691
BseDI CCNNGG 6 cut(s) 657, 658, 1182, 1193, 1303, 1904
BseLI CCNNNNNNNGG 4 cut(s) 770, 1559, 1936, 2690
BseMI GCAATG 2 cut(s) 1765, 2035
BseMII CTCAG 7 cut(s) 362, 554, 586, 1113, 1177, 1511, 2040
BseNI ACTGG 3 cut(s) 1133, 1135, 1882
BseRI GAGGAG 1 cut(s) 2594
BsgI GTGCAG 2 cut(s) 979, 1444
Bsh1236I CGCG 2 cut(s) 1713, 2793
Bsh1285I CGRYCG 1 cut(s) 2771
BshFI GGCC 4 cut(s) 656, 969, 1134, 2064
BshTI ACCGGT 1 cut(s) 1766
BsiEI CGRYCG 1 cut(s) 2771
BsiHKAI GWGCWC 4 cut(s) 1608, 2055, 2149, 2512
BsiSI CCGG 6 cut(s) 447, 678, 1182, 1767, 2065, 2595
BslFI GGGAC 2 cut(s) 1244, 1267
BslI CCNNNNNNNGG 4 cut(s) 770, 1559, 1936, 2690
BsmAI GTCTC 5 cut(s) 359, 2373, 2434, 2459, 2592
BsmFI GGGAC 2 cut(s) 1244, 1267
BsmI GAATGC 3 cut(s) 1353, 1473, 1706
BsnI GGCC 4 cut(s) 656, 969, 1134, 2064
Bso31I GGTCTC 1 cut(s) 2592
Bsp119I TTCGAA 1 cut(s) 430
Bsp1286I GDGCHC 4 cut(s) 1608, 2055, 2149, 2512
Bsp143I GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
Bsp1720I GCTNAGC 3 cut(s) 1163, 2049, 2448
BspANI GGCC 4 cut(s) 656, 969, 1134, 2064
BspCNI CTCAG 7 cut(s) 363, 555, 585, 1114, 1176, 1512, 2041
BspFNI CGCG 2 cut(s) 1713, 2793
BspHI TCATGA 3 cut(s) 357, 517, 2350
BspLI GGNNCC 4 cut(s) 466, 826, 1028, 1133
BspMAI CTGCAG 1 cut(s) 2100
BspOI GCTAGC 1 cut(s) 186
BspPI GGATC 5 cut(s) 459, 472, 1213, 1612, 2303
BspT104I TTCGAA 1 cut(s) 430
BspTI CTTAAG 1 cut(s) 310
BspTNI GGTCTC 1 cut(s) 2592
BsrDI GCAATG 2 cut(s) 1765, 2035
BsrFI RCCGGY 1 cut(s) 1766
BsrI ACTGG 3 cut(s) 1133, 1135, 1882
BssAI RCCGGY 1 cut(s) 1766
BssECI CCNNGG 6 cut(s) 657, 658, 1182, 1193, 1303, 1904
BssMI GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
BssNI GRCGYC 1 cut(s) 2664
BssT1I CCWWGG 1 cut(s) 1303
Bst2UI CCWGG 4 cut(s) 659, 712, 978, 2691
Bst4CI ACNGT 4 cut(s) 1197, 1258, 1654, 2722
Bst6I CTCTTC 3 cut(s) 1240, 1509, 1695
BstACI GRCGYC 1 cut(s) 2664
BstAFI CTTAAG 1 cut(s) 310
BstAPI GCANNNNNTGC 1 cut(s) 2732
BstBI TTCGAA 1 cut(s) 430
BstC8I GCNNGC 8 cut(s) 184, 560, 1331, 1335, 1747, 2491, 2743, 2747
BstDSI CCRYGG 2 cut(s) 1193, 1904
BstENI CCTNNNNNAGG 1 cut(s) 768
BstFNI CGCG 2 cut(s) 1713, 2793
BstHHI GCGC 1 cut(s) 1051
BstKTI GATC 9 cut(s) 442, 467, 796, 1208, 1519, 1620, 2298, 2580, 2718
BstMAI GTCTC 5 cut(s) 359, 2373, 2434, 2459, 2592
BstMBI GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
BstMCI CGRYCG 1 cut(s) 2771
BstMWI GCNNNNNNNGC 8 cut(s) 137, 568, 577, 1046, 1222, 1755, 2206, 2732
BstNI CCWGG 4 cut(s) 659, 712, 978, 2691
BstNSI RCATGY 5 cut(s) 243, 562, 1223, 1642, 2095
BstSCI CCNGG 6 cut(s) 657, 710, 976, 1181, 2593, 2689
BstSFI CTRYAG 3 cut(s) 696, 2096, 2367
BstUI CGCG 2 cut(s) 1713, 2793
BstV2I GAAGAC 3 cut(s) 1932, 1963, 1977
BstX2I RGATCY 1 cut(s) 464
BstXI CCANNNNNNTGG 2 cut(s) 482, 821
BstYI RGATCY 1 cut(s) 464
BsuI GTATCC 1 cut(s) 767
BsuRI GGCC 4 cut(s) 656, 969, 1134, 2064
BtgI CCRYGG 2 cut(s) 1193, 1904
BtgZI GCGATG 1 cut(s) 2556
BtsIMutI CAGTG 4 cut(s) 580, 1142, 1399, 1532
Cac8I GCNNGC 8 cut(s) 184, 560, 1331, 1335, 1747, 2491, 2743, 2747
CciI TCATGA 3 cut(s) 357, 517, 2350
CfoI GCGC 1 cut(s) 1051
Cfr10I RCCGGY 1 cut(s) 1766
Cfr13I GGNCC 3 cut(s) 655, 1132, 1685
Csp6I GTAC 7 cut(s) 318, 444, 929, 1835, 2224, 2372, 2442
CspAI ACCGGT 1 cut(s) 1766
CviQI GTAC 7 cut(s) 318, 444, 929, 1835, 2224, 2372, 2442
DpnI GATC 9 cut(s) 441, 466, 795, 1207, 1518, 1619, 2297, 2579, 2717
DpnII GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
DraI TTTAAA 1 cut(s) 2178
Eam1104I CTCTTC 3 cut(s) 1240, 1509, 1695
EarI CTCTTC 3 cut(s) 1240, 1509, 1695
EciI GGCGGA 1 cut(s) 939
Ecl136II GAGCTC 2 cut(s) 1606, 2053
Eco130I CCWWGG 1 cut(s) 1303
Eco147I AGGCCT 1 cut(s) 969
Eco24I GRGCYC 2 cut(s) 1608, 2055
Eco31I GGTCTC 1 cut(s) 2592
Eco47I GGWCC 1 cut(s) 1685
Eco53kI GAGCTC 2 cut(s) 1606, 2053
Eco57I CTGAAG 5 cut(s) 111, 786, 819, 881, 1946
EcoICRI GAGCTC 2 cut(s) 1606, 2053
EcoNI CCTNNNNNAGG 1 cut(s) 768
EcoO109I RGGNCCY 1 cut(s) 1685
EcoRI GAATTC 3 cut(s) 79, 900, 1994
EcoRII CCWGG 4 cut(s) 657, 710, 976, 2689
EcoT14I CCWWGG 1 cut(s) 1303
EcoT22I ATGCAT 4 cut(s) 560, 920, 2335, 2349
EcoT38I GRGCYC 2 cut(s) 1608, 2055
ErhI CCWWGG 1 cut(s) 1303
FalI AAGNNNNNCTT 6 cut(s) 171, 203, 1674, 1706, 2384, 2416
FaqI GGGAC 2 cut(s) 1244, 1267
FauI CCCGC 2 cut(s) 2691, 2798
FauNDI CATATG 1 cut(s) 914
FbaI TGATCA 2 cut(s) 2577, 2715
FblI GTMKAC 1 cut(s) 1896
FriOI GRGCYC 2 cut(s) 1608, 2055
FspBI CTAG 5 cut(s) 183, 797, 1271, 1727, 2570
GlaI GCGC 1 cut(s) 1050
GsuI CTGGAG 1 cut(s) 2496
HaeIII GGCC 4 cut(s) 656, 969, 1134, 2064
HapII CCGG 6 cut(s) 447, 678, 1182, 1767, 2065, 2595
HhaI GCGC 1 cut(s) 1051
Hin1I GRCGYC 1 cut(s) 2664
Hin6I GCGC 1 cut(s) 1049
HinP1I GCGC 1 cut(s) 1049
HincII GTYRAC 3 cut(s) 1281, 1660, 2707
HindII GTYRAC 3 cut(s) 1281, 1660, 2707
HindIII AAGCTT 4 cut(s) 982, 1153, 2180, 2245
HinfI GANTC 7 cut(s) 739, 1499, 1522, 1588, 1882, 2458, 2755
HpaII CCGG 6 cut(s) 447, 678, 1182, 1767, 2065, 2595
HphI GGTGA 6 cut(s) 1319, 2089, 2317, 2352, 2710, 2725
Hpy99I CGWCG 2 cut(s) 2270, 2666
HpyCH4III ACNGT 4 cut(s) 1197, 1258, 1654, 2722
HpyCH4IV ACGT 2 cut(s) 938, 2664
HpyF10VI GCNNNNNNNGC 8 cut(s) 137, 568, 577, 1046, 1222, 1755, 2206, 2732
HpySE526I ACGT 2 cut(s) 938, 2664
Hsp92I GRCGYC 1 cut(s) 2664
HspAI GCGC 1 cut(s) 1049
Ksp22I TGATCA 2 cut(s) 2577, 2715
Kzo9I GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
LmnI GCTCC 5 cut(s) 830, 1114, 1944, 2058, 2515
LweI GCATC 7 cut(s) 41, 927, 1860, 2209, 2218, 2356, 2599
MaeI CTAG 5 cut(s) 183, 797, 1271, 1727, 2570
MaeII ACGT 2 cut(s) 938, 2664
MaeIII GTNAC 5 cut(s) 263, 1094, 1541, 1873, 2162
MalI GATC 9 cut(s) 441, 466, 795, 1207, 1518, 1619, 2297, 2579, 2717
MboI GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
MfeI CAATTG 1 cut(s) 244
MflI RGATCY 1 cut(s) 464
MhlI GDGCHC 4 cut(s) 1608, 2055, 2149, 2512
MlyI GAGTC 2 cut(s) 1493, 1531
MmeI TCCRAC 2 cut(s) 463, 1557
Mph1103I ATGCAT 4 cut(s) 560, 920, 2335, 2349
MroXI GAANNNNTTC 1 cut(s) 165
MslI CAYNNNNRTG 2 cut(s) 113, 2740
MspA1I CMGCKG 2 cut(s) 1033, 1216
MspCI CTTAAG 1 cut(s) 310
MspI CCGG 6 cut(s) 447, 678, 1182, 1767, 2065, 2595
MspR9I CCNGG 6 cut(s) 659, 712, 978, 1183, 2595, 2691
MunI CAATTG 1 cut(s) 244
Mva1269I GAATGC 3 cut(s) 1353, 1473, 1706
MvaI CCWGG 4 cut(s) 659, 712, 978, 2691
MvnI CGCG 2 cut(s) 1713, 2793
MwoI GCNNNNNNNGC 8 cut(s) 137, 568, 577, 1046, 1222, 1755, 2206, 2732
NciI CCSGG 2 cut(s) 1183, 2595
NdeI CATATG 1 cut(s) 914
NdeII GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
NheI GCTAGC 1 cut(s) 182
NlaIV GGNNCC 4 cut(s) 466, 826, 1028, 1133
NmuCI GTSAC 2 cut(s) 1541, 2162
NsiI ATGCAT 4 cut(s) 560, 920, 2335, 2349
NspI RCATGY 5 cut(s) 243, 562, 1223, 1642, 2095
NspV TTCGAA 1 cut(s) 430
PaeI GCATGC 1 cut(s) 562
PagI TCATGA 3 cut(s) 357, 517, 2350
PasI CCCWGGG 1 cut(s) 658
PceI AGGCCT 1 cut(s) 969
PciI ACATGT 1 cut(s) 1638
PcsI WCGNNNNNNNCGW 1 cut(s) 2538
PctI GAATGC 3 cut(s) 1353, 1473, 1706
PdmI GAANNNNTTC 1 cut(s) 165
PfeI GAWTC 5 cut(s) 739, 1588, 1882, 2458, 2755
PfoI TCCNGGA 2 cut(s) 2593, 2689
PinAI ACCGGT 1 cut(s) 1766
PleI GAGTC 2 cut(s) 1493, 1530
PpsI GAGTC 2 cut(s) 1493, 1530
PpuMI RGGWCCY 1 cut(s) 1685
PscI ACATGT 1 cut(s) 1638
PshBI ATTAAT 2 cut(s) 459, 1286
Psp124BI GAGCTC 2 cut(s) 1608, 2055
Psp1406I AACGTT 1 cut(s) 938
Psp5II RGGWCCY 1 cut(s) 1685
Psp6I CCWGG 4 cut(s) 657, 710, 976, 2689
PspGI CCWGG 4 cut(s) 657, 710, 976, 2689
PspN4I GGNNCC 4 cut(s) 466, 826, 1028, 1133
PspPI GGNCC 3 cut(s) 655, 1132, 1685
PspPPI RGGWCCY 1 cut(s) 1685
PstI CTGCAG 1 cut(s) 2100
PsuI RGATCY 1 cut(s) 464
PvuII CAGCTG 2 cut(s) 1033, 1216
RsaI GTAC 7 cut(s) 319, 445, 930, 1836, 2225, 2373, 2443
RsaNI GTAC 7 cut(s) 318, 444, 929, 1835, 2224, 2372, 2442
RseI CAYNNNNRTG 2 cut(s) 113, 2740
SacI GAGCTC 2 cut(s) 1608, 2055
Sau3AI GATC 9 cut(s) 439, 464, 793, 1205, 1516, 1617, 2295, 2577, 2715
Sau96I GGNCC 3 cut(s) 655, 1132, 1685
ScaI AGTACT 1 cut(s) 930
SchI GAGTC 2 cut(s) 1493, 1531
ScrFI CCNGG 6 cut(s) 659, 712, 978, 1183, 2595, 2691
SduI GDGCHC 4 cut(s) 1608, 2055, 2149, 2512
SfaNI GCATC 7 cut(s) 41, 927, 1860, 2209, 2218, 2356, 2599
SfcI CTRYAG 3 cut(s) 696, 2096, 2367
SfuI TTCGAA 1 cut(s) 430
SinI GGWCC 1 cut(s) 1685
SmiMI CAYNNNNRTG 2 cut(s) 113, 2740
SmlI CTYRAG 7 cut(s) 310, 716, 985, 1019, 1156, 2120, 2462
SmoI CTYRAG 7 cut(s) 310, 716, 985, 1019, 1156, 2120, 2462
SphI GCATGC 1 cut(s) 562
SseBI AGGCCT 1 cut(s) 969
SspI AATATT 1 cut(s) 2009
SspMI CTAG 5 cut(s) 183, 797, 1271, 1727, 2570
SstI GAGCTC 2 cut(s) 1608, 2055
StuI AGGCCT 1 cut(s) 969
StyD4I CCNGG 6 cut(s) 657, 710, 976, 1181, 2593, 2689
StyI CCWWGG 1 cut(s) 1303
TaaI ACNGT 4 cut(s) 1197, 1258, 1654, 2722
TaiI ACGT 2 cut(s) 941, 2667
TaqII GACCGA 2 cut(s) 2279, 2785
TatI WGTACW 3 cut(s) 928, 1834, 2371
TfiI GAWTC 5 cut(s) 739, 1588, 1882, 2458, 2755
TscAI CASTG 4 cut(s) 580, 1142, 1399, 1539
TseFI GTSAC 2 cut(s) 1541, 2162
Tsp45I GTSAC 2 cut(s) 1541, 2162
TspDTI ATGAA 8 cut(s) 17, 210, 492, 506, 857, 1586, 1819, 1938
TspGWI ACGGA 2 cut(s) 1773, 2150
TspRI CASTG 4 cut(s) 580, 1142, 1399, 1539
Vha464I CTTAAG 1 cut(s) 310
VpaK11BI GGWCC 1 cut(s) 1685
VspI ATTAAT 2 cut(s) 459, 1286
XagI CCTNNNNNAGG 1 cut(s) 768
XceI RCATGY 5 cut(s) 243, 562, 1223, 1642, 2095
XcmI CCANNNNNNNNNTGG 1 cut(s) 2011
XmiI GTMKAC 1 cut(s) 1896
XmnI GAANNNNTTC 1 cut(s) 165
XspI CTAG 5 cut(s) 183, 797, 1271, 1727, 2570
ZraI GACGTC 1 cut(s) 2665
ZrmI AGTACT 1 cut(s) 930
Zsp2I ATGCAT 4 cut(s) 560, 920, 2335, 2349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.