Rmu_sc0005979.1_g000010

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005979.1
Physical Location & Seq
Forward (+)
46061 .. 49264
3204 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005979.1_g000010.1.cds

Sequence Viewer

Length: 2979 bp
atgaaaccttctacttactttgattatgcctgctctcttgcttgcattatcttgttccttcagttggtttcatcaccaaaacttgcttctgctgattctacacaagcagaggcacttctcaaatggaaagccagctttctgaatcaaaccgggaacaacaatctcacctcgtggacttccctccccggaaacgccaccaattcatcaagtgcatgcaatgtttggaccggtatttcatgcaatgctgccggaagtgtcaaccggataaaccttaccaattctggtataaaaggtacgctacatgaactctcattccagtcattccctgatcttgaatatgttgacctcagtgtcaatgaacttttcgacaccatcccacctcagattagttccctctccaaactcatctaccttgatgtatcttataaccaattgactgggatcatcccaccagaagttggtctcctaacaaatcttcaagtcctccacctaaacggaaaccagttaaatggctcgattcctgaagaaatgagccagctcaaatctctgtatgagcttgctctgaacaccaacaatctagaagggtatgttccagccttcctgggtaattttaccaacatgacaaatttgtatctctttggaaatcagttttctagtgtcattcctcctgaaatcggaaacctatcaaaattggttgaattgtacttggatgacaaccatttaacaggtcctatccctccaagttttggaaacttggaaaatctagctgtgttgtacttagcctacaacaacctttctgggtctatcccttcagaaataggaaagatgaagtctcttgtgcaactgagcattcaatcaaacaatctttctggttcaatccctgcatccataggtgatcttccaaaccttacccttctttatctctattcaaacaaactctccggcagtattcctaaggagatagggaacttgaaatctatggtggatctacagttgagccagaatcaactaaatggctcggttccaacttcattgggtgacttggacaacttagtaagcttgtacctccgtgataaccaactttccggcaccatcccccaacagataggaaatctcacaaagatgacaattgtgcaatttgataccaaccgattttctggttatttgccccaaaacatttgcagaggtggattgcttcaaaacttcacagcattcaacaatgatttgataggtccaatccccgagagcttgaaaacttgcaagagcttaatcagagtacgtcttgaagggaaccaattgactggcaatgtatctcaagactttgagcttggcaatgcaactcaaattcaggggcttgatctttcttccaaccatttagttggtgtgattccagaagatcatgggaggctaagtttggtgaatctgaagttgggtgataaccaactttctggtcctataccctccacatttgcatctctgactgaccttgaatatatagacctgtccaccaacaaaattaacgagtcaattccaagctttgtaggtgacatgtcgaaactaatctacttgaatctgagcaacaacaagttcagtcaggaaattccattacagttggggaatttatttcaactgtcccagctagatttaagtagtaactcacttgagggtaacataccatcacaaatgagcaagctgcagagcttggagggtctgaatctatcccacaataatctttccggtgtcattccaacatcttttggtgaaatgcctggcttgttgcacattgacatgtcctacaatcagttgcagggcgccatccctgacagcaaagcatttcaaaatgcttccttggaagggaataatggattgtgcggcaatgttgtaggactgcaaccctgcaatccttctgcaggaaataaaagtacctcaaacaaggacagaaaactagtgtttttaatcgtgttccctgttctgggagtaattttacttgctttacttggaattgccctcataagaagaagaagaagaagaagaagaagaagaagctacgtacagaatgaagtctttgcaatagcaaattttgatggaagaaaaatgtatgtcgaaatcatggaggcaaccaacagttttgacactgcatactgcattgggaaaggtggatatggaacagtctacaaggcaaagctaccatctggcagcatagtcgccgtgaagaaactctatccagtacatgatagtgaggaggcatctcaaaaggagtttttcaatgaaataagggcactactggagataccaccccgaaacattgtgaaacttcttggtttttgttcaaatgtgtatcactcctttttggtctatgagtatctagaaaagggaagcatgtctgcaaatttgagcaaagaattagaagcaaagaaattgaactggagtataagggtgaatatagttaaaggtgtggctcatgccttatcttatatgcatcatgattgtgtgctaccgattttgcatcgagacatatcaagcaacaacattttgctgaatgaagattatgagccctgtgtggcagactttggcactgccaagcttttaaatccaggctcatcaaattggacaacccctgcaggaacatatggatatatagccccagagctcgctttcacgatgaaggtaactgagaaatgtgatgtttatagctttggagtgctggcactggaagtcctaatggggaagcatctgggtgatttggtctcctcatttccgaatccttcagcaaatgaaaacatgtcactgatggatttgttggaccaacggcttccccctccgacacctgatgttgaggatgaactgataaccattgcaagactagcaatcgagtgcagatattcccatccacaatcaaggccaacaatgcaaatggtttctcaggtgctatcatcccaaaatgcatattcctacagacaacaggtcattacactttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

992

Amino Acids

108.78

Weight (kDa)

5.58

Isoelectric Point (pI)

38.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 426
AasI GACNNNNNNGTC 1 cut(s) 350
AccB1I GGYRCC 2 cut(s) 1088, 1811
AccB7I CCANNNNNTGG 2 cut(s) 458, 746
AccI GTMKAC 1 cut(s) 2172
AciI CCGC 1 cut(s) 1872
AclWI GGATC 2 cut(s) 449, 993
AcsI RAATTY 6 cut(s) 625, 1344, 1599, 1618, 2077, 2389
AcuI CTGAAG 5 cut(s) 44, 543, 795, 1445, 2751
AcyI GRCGYC 1 cut(s) 1812
AdeI CACNNNGTG 1 cut(s) 171
AfaI GTAC 8 cut(s) 295, 704, 776, 1064, 1278, 1924, 2052, 2229
AfiI CCNNNNNNNGG 8 cut(s) 64, 458, 674, 746, 1854, 1910, 1972, 1973
AflIII ACRYGT 3 cut(s) 1548, 1788, 2781
AgeI ACCGGT 1 cut(s) 227
AhdI GACNNNNNGTC 1 cut(s) 2963
AhlI ACTAGT 1 cut(s) 1945
AjnI CCWGG 3 cut(s) 600, 1768, 2593
AjuI GAANNNNNNNTTGG 4 cut(s) 70, 102, 1412, 1444
AloI GAACNNNNNNTCC 2 cut(s) 297, 329
Alw21I GWGCWC 1 cut(s) 2652
Alw26I GTCTC 4 cut(s) 467, 837, 2505, 2752
AlwI GGATC 2 cut(s) 449, 993
Ama87I CYCGRG 1 cut(s) 1241
AoxI GGCC 1 cut(s) 2900
ApeKI GCWGC 3 cut(s) 245, 1693, 2196
ApoI RAATTY 6 cut(s) 625, 1344, 1599, 1618, 2077, 2389
AsiGI ACCGGT 1 cut(s) 227
AspLEI GCGC 1 cut(s) 1814
AspS9I GGNCC 5 cut(s) 225, 728, 1232, 1451, 2803
AsuC2I CCSGG 2 cut(s) 151, 186
AvaI CYCGRG 1 cut(s) 1241
AvaII GGWCC 5 cut(s) 225, 728, 1232, 1451, 2803
AxyI CCTNAGG 1 cut(s) 954
BaeGI GKGCMC 1 cut(s) 2281
BanI GGYRCC 2 cut(s) 1088, 1811
BanII GRGCYC 2 cut(s) 2556, 2652
BauI CACGAG 1 cut(s) 169
Bbv12I GWGCWC 1 cut(s) 2652
BbvI GCAGC 3 cut(s) 232, 1680, 2208
BccI CCATC 8 cut(s) 380, 1100, 1684, 1823, 2078, 2197, 2785, 2895
BceAI ACGGC 2 cut(s) 2192, 2825
BcgI CGANNNNNNTGC 2 cut(s) 2185, 2219
BciT130I CCWGG 3 cut(s) 602, 1770, 2595
BcnI CCSGG 2 cut(s) 151, 186
BcoDI GTCTC 4 cut(s) 467, 837, 2505, 2752
BcuI ACTAGT 1 cut(s) 1945
BfaI CTAG 7 cut(s) 578, 654, 764, 1640, 1946, 2366, 2864
BfmI CTRYAG 5 cut(s) 989, 1694, 1908, 2619, 2953
BfoI RGCGCY 1 cut(s) 1815
BisI GCNGC 4 cut(s) 246, 1694, 1873, 2197
BlsI GCNGC 4 cut(s) 247, 1695, 1874, 2198
Bme1390I CCNGG 5 cut(s) 151, 186, 602, 1770, 2595
Bme18I GGWCC 5 cut(s) 225, 728, 1232, 1451, 2803
BmeRI GACNNNNNGTC 1 cut(s) 2963
BmeT110I CYCGRG 1 cut(s) 1241
BmgT120I GGNCC 5 cut(s) 225, 728, 1232, 1451, 2803
BmiI GGNNCC 4 cut(s) 1023, 1090, 1292, 1813
BmrFI CCNGG 5 cut(s) 151, 186, 602, 1770, 2595
BmrI ACTGGG 1 cut(s) 447
BmsI GCATC 6 cut(s) 893, 1481, 2255, 2488, 2515, 2740
BmuI ACTGGG 1 cut(s) 447
BpmI CTGGAG 2 cut(s) 2306, 2446
BpuEI CTTGAG 2 cut(s) 1299, 1682
BpuMI CCSGG 2 cut(s) 151, 186
BsaAI YACGTR 1 cut(s) 2050
BsaHI GRCGYC 1 cut(s) 1812
BsaI GGTCTC 2 cut(s) 467, 2752
BsaJI CCNNGG 3 cut(s) 184, 601, 1848
BsaWI WCCGGW 3 cut(s) 227, 261, 1736
BsaXI ACNNNNNCTCC 4 cut(s) 923, 953, 1396, 1426
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 458, 674, 746, 1854, 1910, 1972, 1973
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 8 cut(s) 316, 442, 502, 1306, 2225, 2289, 2429, 2715
Bse21I CCTNAGG 1 cut(s) 954
Bse3DI GCAATG 6 cut(s) 223, 247, 1312, 1339, 1882, 2853
BseBI CCWGG 3 cut(s) 602, 1770, 2595
BseDI CCNNGG 3 cut(s) 184, 601, 1848
BseGI GGATG 9 cut(s) 372, 444, 715, 884, 1092, 1815, 2845, 2887, 2933
BseLI CCNNNNNNNGG 8 cut(s) 64, 458, 674, 746, 1854, 1910, 1972, 1973
BseMI GCAATG 6 cut(s) 223, 247, 1312, 1339, 1882, 2853
BseMII CTCAG 6 cut(s) 361, 395, 836, 1565, 2664, 2936
BseNI ACTGG 8 cut(s) 316, 442, 502, 1306, 2225, 2289, 2429, 2715
BseRI GAGGAG 2 cut(s) 2255, 2740
BseSI GKGCMC 1 cut(s) 2281
BseXI GCAGC 3 cut(s) 232, 1680, 2208
BseYI CCCAGC 1 cut(s) 1635
BsgI GTGCAG 1 cut(s) 2896
BshFI GGCC 1 cut(s) 2902
BshNI GGYRCC 2 cut(s) 1088, 1811
BshTI ACCGGT 1 cut(s) 227
BsiHKAI GWGCWC 1 cut(s) 2652
BsiHKCI CYCGRG 1 cut(s) 1241
BsiSI CCGG 8 cut(s) 150, 186, 228, 249, 262, 942, 1086, 1737
BslFI GGGAC 1 cut(s) 1618
BslI CCNNNNNNNGG 8 cut(s) 64, 458, 674, 746, 1854, 1910, 1972, 1973
BsmAI GTCTC 4 cut(s) 467, 837, 2505, 2752
BsmFI GGGAC 1 cut(s) 1618
BsmI GAATGC 2 cut(s) 849, 1211
BsnI GGCC 1 cut(s) 2902
Bso31I GGTCTC 2 cut(s) 467, 2752
BsoBI CYCGRG 1 cut(s) 1241
Bsp1286I GDGCHC 3 cut(s) 2281, 2556, 2652
Bsp143I GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
BspACI CCGC 1 cut(s) 1872
BspANI GGCC 1 cut(s) 2902
BspCNI CTCAG 6 cut(s) 360, 394, 837, 1566, 2665, 2935
BspHI TCATGA 1 cut(s) 2482
BspLI GGNNCC 4 cut(s) 1023, 1090, 1292, 1813
BspMAI CTGCAG 3 cut(s) 1698, 1912, 2623
BspPI GGATC 2 cut(s) 449, 993
BspT107I GGYRCC 2 cut(s) 1088, 1811
BspTNI GGTCTC 2 cut(s) 467, 2752
BsrDI GCAATG 6 cut(s) 223, 247, 1312, 1339, 1882, 2853
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 8 cut(s) 316, 442, 502, 1306, 2225, 2289, 2429, 2715
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 3 cut(s) 184, 601, 1848
BssMI GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
BssNI GRCGYC 1 cut(s) 1812
BssSI CACGAG 1 cut(s) 169
BssT1I CCWWGG 1 cut(s) 1848
Bst2BI CACGAG 1 cut(s) 169
Bst2UI CCWGG 3 cut(s) 602, 1770, 2595
Bst4CI ACNGT 5 cut(s) 993, 1611, 1632, 2126, 2170
BstACI GRCGYC 1 cut(s) 1812
BstBAI YACGTR 1 cut(s) 2050
BstC8I GCNNGC 9 cut(s) 31, 43, 133, 214, 536, 558, 1691, 2652, 2706
BstENI CCTNNNNNAGG 1 cut(s) 1908
BstF5I GGATG 9 cut(s) 372, 444, 715, 884, 1092, 1815, 2845, 2887, 2933
BstH2I RGCGCY 1 cut(s) 1815
BstHHI GCGC 1 cut(s) 1814
BstKTI GATC 6 cut(s) 331, 444, 898, 988, 1360, 1399
BstMAI GTCTC 4 cut(s) 467, 837, 2505, 2752
BstMBI GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
BstMWI GCNNNNNNNGC 2 cut(s) 2864, 2908
BstNI CCWGG 3 cut(s) 602, 1770, 2595
BstNSI RCATGY 5 cut(s) 216, 1552, 1792, 2383, 2785
BstSCI CCNGG 5 cut(s) 149, 184, 600, 1768, 2593
BstSFI CTRYAG 5 cut(s) 989, 1694, 1908, 2619, 2953
BstSLI GKGCMC 1 cut(s) 2281
BstSNI TACGTA 1 cut(s) 2050
BstV1I GCAGC 3 cut(s) 232, 1680, 2208
BstX2I RGATCY 1 cut(s) 985
BstXI CCANNNNNNTGG 5 cut(s) 437, 509, 1301, 1379, 1448
BstYI RGATCY 1 cut(s) 985
Bsu36I CCTNAGG 1 cut(s) 954
BsuRI GGCC 1 cut(s) 2902
BtsCI GGATG 9 cut(s) 372, 444, 715, 884, 1092, 1815, 2845, 2887, 2933
BtsI GCAGTG 2 cut(s) 2133, 2574
BtsIMutI CAGTG 5 cut(s) 355, 2133, 2574, 2708, 2786
Cac8I GCNNGC 9 cut(s) 31, 43, 133, 214, 536, 558, 1691, 2652, 2706
CciI TCATGA 1 cut(s) 2482
CfoI GCGC 1 cut(s) 1814
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 5 cut(s) 225, 728, 1232, 1451, 2803
Csp6I GTAC 8 cut(s) 294, 703, 775, 1063, 1277, 1923, 2051, 2228
CspAI ACCGGT 1 cut(s) 227
CviQI GTAC 8 cut(s) 294, 703, 775, 1063, 1277, 1923, 2051, 2228
DinI GGCGCC 1 cut(s) 1813
DpnI GATC 6 cut(s) 330, 443, 897, 987, 1359, 1398
DpnII GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
DraI TTTAAA 1 cut(s) 2589
DraIII CACNNNGTG 1 cut(s) 171
DrdI GACNNNNNNGTC 1 cut(s) 350
DriI GACNNNNNGTC 1 cut(s) 2963
DseDI GACNNNNNNGTC 1 cut(s) 350
Eam1105I GACNNNNNGTC 1 cut(s) 2963
Ecl136II GAGCTC 1 cut(s) 2650
Eco105I TACGTA 1 cut(s) 2050
Eco130I CCWWGG 1 cut(s) 1848
Eco24I GRGCYC 2 cut(s) 2556, 2652
Eco31I GGTCTC 2 cut(s) 467, 2752
Eco47I GGWCC 5 cut(s) 225, 728, 1232, 1451, 2803
Eco53kI GAGCTC 1 cut(s) 2650
Eco57I CTGAAG 5 cut(s) 44, 543, 795, 1445, 2751
Eco81I CCTNAGG 1 cut(s) 954
Eco88I CYCGRG 1 cut(s) 1241
EcoICRI GAGCTC 1 cut(s) 2650
EcoNI CCTNNNNNAGG 1 cut(s) 1908
EcoO109I RGGNCCY 1 cut(s) 728
EcoRII CCWGG 3 cut(s) 600, 1768, 2593
EcoT14I CCWWGG 1 cut(s) 1848
EcoT22I ATGCAT 2 cut(s) 2481, 2947
EcoT38I GRGCYC 2 cut(s) 2556, 2652
EgeI GGCGCC 1 cut(s) 1813
EheI GGCGCC 1 cut(s) 1813
ErhI CCWWGG 1 cut(s) 1848
FaqI GGGAC 1 cut(s) 1618
FauNDI CATATG 1 cut(s) 2629
FblI GTMKAC 1 cut(s) 2172
Fnu4HI GCNGC 4 cut(s) 246, 1694, 1873, 2197
FokI GGATG 9 cut(s) 359, 431, 722, 871, 1079, 1802, 2852, 2874, 2920
FriOI GRGCYC 2 cut(s) 2556, 2652
Fsp4HI GCNGC 4 cut(s) 246, 1694, 1873, 2197
FspBI CTAG 7 cut(s) 578, 654, 764, 1640, 1946, 2366, 2864
GlaI GCGC 1 cut(s) 1813
GluI GCNGC 4 cut(s) 246, 1694, 1873, 2197
GsaI CCCAGC 1 cut(s) 1639
GsuI CTGGAG 2 cut(s) 2306, 2446
HaeII RGCGCY 1 cut(s) 1815
HaeIII GGCC 1 cut(s) 2902
HapII CCGG 8 cut(s) 150, 186, 228, 249, 262, 942, 1086, 1737
HhaI GCGC 1 cut(s) 1814
Hin1I GRCGYC 1 cut(s) 1812
Hin6I GCGC 1 cut(s) 1812
HinP1I GCGC 1 cut(s) 1812
HincII GTYRAC 2 cut(s) 259, 343
HindII GTYRAC 2 cut(s) 259, 343
HindIII AAGCTT 3 cut(s) 1057, 1534, 2582
HpaII CCGG 8 cut(s) 150, 186, 228, 249, 262, 942, 1086, 1737
Hpy166II GTNNAC 5 cut(s) 174, 259, 343, 1506, 2173
Hpy8I GTNNAC 5 cut(s) 174, 259, 343, 1506, 2173
HpyCH4III ACNGT 5 cut(s) 993, 1611, 1632, 2126, 2170
HpyCH4IV ACGT 2 cut(s) 1279, 2049
HpyF10VI GCNNNNNNNGC 2 cut(s) 2864, 2908
HpySE526I ACGT 2 cut(s) 1279, 2049
Hsp92I GRCGYC 1 cut(s) 1812
HspAI GCGC 1 cut(s) 1812
KasI GGCGCC 1 cut(s) 1811
Kzo9I GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
Lsp1109I GCAGC 3 cut(s) 232, 1680, 2208
LweI GCATC 6 cut(s) 893, 1481, 2255, 2488, 2515, 2740
MaeI CTAG 7 cut(s) 578, 654, 764, 1640, 1946, 2366, 2864
MaeII ACGT 2 cut(s) 1279, 2049
MaeIII GTNAC 6 cut(s) 1037, 1544, 1652, 1667, 2668, 2784
MalI GATC 6 cut(s) 330, 443, 897, 987, 1359, 1398
MboI GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
MfeI CAATTG 3 cut(s) 431, 1128, 1295
MflI RGATCY 1 cut(s) 985
MhlI GDGCHC 3 cut(s) 2281, 2556, 2652
Mly113I GGCGCC 1 cut(s) 1812
MlyI GAGTC 1 cut(s) 1532
MmeI TCCRAC 5 cut(s) 1049, 1392, 1772, 2781, 2846
Mph1103I ATGCAT 2 cut(s) 2481, 2947
MseI TTAA 9 cut(s) 506, 722, 1268, 1518, 1646, 1955, 2448, 2588, 2977
MslI CAYNNNNRTG 5 cut(s) 1121, 1787, 2235, 2487, 2736
MspI CCGG 8 cut(s) 150, 186, 228, 249, 262, 942, 1086, 1737
MspR9I CCNGG 5 cut(s) 151, 186, 602, 1770, 2595
MunI CAATTG 3 cut(s) 431, 1128, 1295
Mva1269I GAATGC 2 cut(s) 849, 1211
MvaI CCWGG 3 cut(s) 602, 1770, 2595
MwoI GCNNNNNNNGC 2 cut(s) 2864, 2908
NarI GGCGCC 1 cut(s) 1812
NciI CCSGG 2 cut(s) 151, 186
NdeI CATATG 1 cut(s) 2629
NdeII GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
NlaIV GGNNCC 4 cut(s) 1023, 1090, 1292, 1813
NmuCI GTSAC 3 cut(s) 1037, 1544, 2784
NsiI ATGCAT 2 cut(s) 2481, 2947
NspI RCATGY 5 cut(s) 216, 1552, 1792, 2383, 2785
PaeI GCATGC 1 cut(s) 216
PagI TCATGA 1 cut(s) 2482
PciI ACATGT 3 cut(s) 1548, 1788, 2781
PctI GAATGC 2 cut(s) 849, 1211
PfeI GAWTC 9 cut(s) 95, 142, 517, 1003, 1387, 1420, 1570, 1714, 2761
PflMI CCANNNNNTGG 2 cut(s) 458, 746
PinAI ACCGGT 1 cut(s) 227
PkrI GCNGC 4 cut(s) 247, 1695, 1874, 2198
PleI GAGTC 1 cut(s) 1531
PluTI GGCGCC 1 cut(s) 1815
PpsI GAGTC 1 cut(s) 1531
Ppu21I YACGTR 1 cut(s) 2050
PpuMI RGGWCCY 1 cut(s) 728
PscI ACATGT 3 cut(s) 1548, 1788, 2781
PsiI TTATAA 1 cut(s) 426
Psp124BI GAGCTC 1 cut(s) 2652
Psp5II RGGWCCY 1 cut(s) 728
Psp6I CCWGG 3 cut(s) 600, 1768, 2593
PspFI CCCAGC 1 cut(s) 1635
PspGI CCWGG 3 cut(s) 600, 1768, 2593
PspN4I GGNNCC 4 cut(s) 1023, 1090, 1292, 1813
PspPI GGNCC 5 cut(s) 225, 728, 1232, 1451, 2803
PspPPI RGGWCCY 1 cut(s) 728
PstI CTGCAG 3 cut(s) 1698, 1912, 2623
PsuI RGATCY 1 cut(s) 985
RsaI GTAC 8 cut(s) 295, 704, 776, 1064, 1278, 1924, 2052, 2229
RsaNI GTAC 8 cut(s) 294, 703, 775, 1063, 1277, 1923, 2051, 2228
RseI CAYNNNNRTG 5 cut(s) 1121, 1787, 2235, 2487, 2736
SacI GAGCTC 1 cut(s) 2652
SaqAI TTAA 9 cut(s) 506, 722, 1268, 1518, 1646, 1955, 2448, 2588, 2977
SatI GCNGC 4 cut(s) 246, 1694, 1873, 2197
Sau3AI GATC 6 cut(s) 328, 441, 895, 985, 1357, 1396
Sau96I GGNCC 5 cut(s) 225, 728, 1232, 1451, 2803
SbfI CCTGCAGG 1 cut(s) 2623
SchI GAGTC 1 cut(s) 1532
ScrFI CCNGG 5 cut(s) 151, 186, 602, 1770, 2595
SdaI CCTGCAGG 1 cut(s) 2623
SduI GDGCHC 3 cut(s) 2281, 2556, 2652
SfaNI GCATC 6 cut(s) 893, 1481, 2255, 2488, 2515, 2740
SfcI CTRYAG 5 cut(s) 989, 1694, 1908, 2619, 2953
SfoI GGCGCC 1 cut(s) 1813
SinI GGWCC 5 cut(s) 225, 728, 1232, 1451, 2803
SmiMI CAYNNNNRTG 5 cut(s) 1121, 1787, 2235, 2487, 2736
SmlI CTYRAG 2 cut(s) 1314, 1661
SmoI CTYRAG 2 cut(s) 1314, 1661
SnaBI TACGTA 1 cut(s) 2050
SpeI ACTAGT 1 cut(s) 1945
SphI GCATGC 1 cut(s) 216
Sse8387I CCTGCAGG 1 cut(s) 2623
SsiI CCGC 1 cut(s) 1872
SspDI GGCGCC 1 cut(s) 1811
SspMI CTAG 7 cut(s) 578, 654, 764, 1640, 1946, 2366, 2864
SstI GAGCTC 1 cut(s) 2652
StyD4I CCNGG 5 cut(s) 149, 184, 600, 1768, 2593
StyI CCWWGG 1 cut(s) 1848
TaaI ACNGT 5 cut(s) 993, 1611, 1632, 2126, 2170
TaiI ACGT 2 cut(s) 1282, 2052
TaqI TCGA 6 cut(s) 366, 515, 1553, 2103, 2509, 2871
TatI WGTACW 3 cut(s) 702, 774, 2227
TauI GCSGC 1 cut(s) 1875
TfiI GAWTC 9 cut(s) 95, 142, 517, 1003, 1387, 1420, 1570, 1714, 2761
Tru1I TTAA 9 cut(s) 506, 722, 1268, 1518, 1646, 1955, 2448, 2588, 2977
Tru9I TTAA 9 cut(s) 506, 722, 1268, 1518, 1646, 1955, 2448, 2588, 2977
TscAI CASTG 5 cut(s) 355, 2140, 2581, 2715, 2793
TseFI GTSAC 3 cut(s) 1037, 1544, 2784
TseI GCWGC 3 cut(s) 245, 1693, 2196
Tsp45I GTSAC 3 cut(s) 1037, 1544, 2784
TspGWI ACGGA 2 cut(s) 510, 1058
TspRI CASTG 5 cut(s) 355, 2140, 2581, 2715, 2793
Van91I CCANNNNNTGG 2 cut(s) 458, 746
VpaK11BI GGWCC 5 cut(s) 225, 728, 1232, 1451, 2803
XagI CCTNNNNNAGG 1 cut(s) 1908
XapI RAATTY 6 cut(s) 625, 1344, 1599, 1618, 2077, 2389
XbaI TCTAGA 2 cut(s) 577, 2365
XceI RCATGY 5 cut(s) 216, 1552, 1792, 2383, 2785
XmiI GTMKAC 1 cut(s) 2172
XspI CTAG 7 cut(s) 578, 654, 764, 1640, 1946, 2366, 2864
Zsp2I ATGCAT 2 cut(s) 2481, 2947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.