Prupe.1G516000_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
42449685 .. 42453411
3727 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G516000.1

Sequence Viewer

Length: 2994 bp
ATGGGAACATCAACCTCTAAGAAGTGTTTACGCTCTCTAAGTTTCTTTATCACGTTTGTGTTTGTTTTCATTTCATCAGCAAGTTACGTTGCTTCTGCTGAAGAAGCCGGTGCGCTTCTGCAATGGAAAACCAGCCTTCAAGACCATCGGTCACGCCTAACTTCATGGACTTCTCTGCACTCTTCCAACACAACTAGTCCATGCACTTGGTTTGCCATTTCTTGCAACACTGCTATGAGTGTGATCAAAATAAACTTGACTAAGTCCGGTTTACAAGGTACGCTCTCTGGATTTTCGTTCTCGTCGTTCCCGAATCTTGAGCATTTTGATCTCAGCATGAACTCAATCTTTGGTACCATTCCACCCCAAATCAGTCAGCTCTCCAAACTAGTCTATCTTGATTTGTCCTATAATCGGTTCAACGGTTCAGTTCCTGCTTCTGTGGGAAATCTGAGCAATCTGGTTTACTTGGATCTGTGTAGGAACTATCTAAATAGTTCCATTCCCTTAGAAATGGGGAACCTTTCAAGTTTGGTGGAGCTTTATTTGAATACCAACAATCTAACAGGTTCCATCCCATCAACTCTTGTGAACTTAAAAAGGTTAAGATTGTTATACATGTATGAGAACGTGCTTGCTGGCTCCATTCCCCTAGACATAGGAAACATGGTATCTCTCAGGAATATAAGCCTTCACGACAACAATCTTTCTGGTGCTATCCCAGTTTCCTTATGTGACCTGAGAAACCTTACCTTGCTTGAACTCTATCGGAATAATCTTTCAGGCCCTATTCCGGAAAATATTGGAGACTTGAAGTCTCTTCTTGTTCTAAATCTAATGGAGAATAACCTCAGTGGTCCTATTCCCTTGTCAGTTGGTAATTTGAGCAAGTTACAAGTTTTATACATTCGTGACAACCCACTGTCAGGTTCCATTCCTGAAGTCATAGGAAATCTCATGAATTTGGTTGTGTTCCGAGTTGCCAGAAACAATTTAACTGGTTATTTGCCAGAGAACATCTGCAAAGGTGGAAAGCTTGAATACTTCACTGCAAATGGCAATAGTCTAACAGGCCGAATACCCAAAAGCTTGAGAAACTGCACAACCTTGTATAGAGTCCGACTTGATGGAAATCAAATCACTGGAAATATATCTGAAGACTTTGGTGTTTATCCAAACTTGGATTACATAAATCTAAGCGATAATAAATTTTATGGCAAAATTTCGGACAAATGGGGTAAATCTCTGCAACTAACAAATTTTGAGATTGCAGGGAACAATATCACTGGTTCCATACCACCTGAGCTTGGCAACTTGACTCAACTTCATCTGCTTAATCTTTCTTCAAATCATTTAGTTGGGAAGATCCCTATGGAACTTGGAAGGCTGACTTTGCTTGTGAAGCTTATGCTGAATGCCAATCAACTTTCTGGTGGTATACCTCAAGAACTTGGATCACTAACTGATCTTGAGTATCTTGACCTGTCCACGAACAATTTGAGCTTGCCAATACCAAGTAGCCTTGGGAACTTTATGCATCTGCACCACATGAATTTGAGCAACAACATGTTGAGCCACAAAACCCCATATCAGTTGGGAATGTTACTTCAGCTCTCTGTGCTGGATTTGAGTTATAACTCTCTGGATGAAGAGATACCAACCGAGTTTTTTGGTTTGGATAGCTTGGTGACACTAAACCTCTCCCACAACAACCTCTCTGGTTTTATTCCAGGCACTTTTGACAAATTGCGTGGCTTGGAGTTCGTCGACATATCATACAATCAATTACAGGGTCCAATTCCAAACAACAAAGCATTTCAAGAGGCTCCCATAGAAGCATTCCTGGGGAACAAAGGTTTGTGTAATGCTACAGGTCTGCAGCCCTGTCCTAGCAAAAAGAGGCCTAACTCGAAAGTCAGTTTCAAAATTGTGTACTTAGTTGTGCCACCTGTGGTGGGAGCACTTATAATTGCTTCATGTAGAATTTATATCCCTTTACTAAGAAGAAAGAAACGTCAACAAACAGAAGAATGTGACATGCCCCCCAAAGAATTTGAACTGCGTTCAATTTCGATTTTCGGTGGGAAGTTGTTATATGAAGAAATCATAAAAGCAACTGAGGATTTTGATGATTCATATTGCATTGGAAGAGGGGGAGTTGGAAAGGTTTACAAAGCAAAGCTGCCCTCAGATGACTTGGTAGCTGTAAAGAAACTTCACAGTCCATGTGATGGTGAGAGGAGCTTCCAAAAGGAGTTCTTAAATGAGGTAAGGGCATTAACTGAGATACGCCATCGAAACATTGTGAAGCTTTATGGTTTCTGTTCACATTCGCGACACTCATTTTTGGTTTATGAGTACCTTGAAAGGGGTAGCTTGTTTTCAATCTTGGCCAATGATGAGGAGGCTAGTAAATTGGATTGGAGTAAAAGGGTGAATATCATTAAAGGTGTGGCTCATGGCTTATCCTACATGCACTCTGATGTGTCCCCGCCAATTGTTCATCGAGACATATCCAGCAAGAACATTTTGCTAGACGCTGAATATGAGGCTTGCATTTCAGACTTTGGCACTGCTAAGCTTCTTGAGCAGGACTCATCTAACTGGACCACCGTTGCAGGCACATTCGGATATGTAGCACCAGAGTTTGCTTATACATTGAAGGTGACTGAGAAATGTGACGTCTACAGCTTTGGAGTGTTAGCACTTGAAGTGATTAAAGGACAGTACCCGAATAATATTCTAATTGGGTCTTTGTTGTCACCAGCGTTAAGCAGGGAAGGCAAAATTCCGGTGGAATTGCTGGATGGTCGCCTTCCACCACCCACAGATAAAGTTCTGGATGAAATTTTTACCATCTTGAAGCTAGCTGTTCCATGCTTACATGCCAATCCAAAATTTAGGCCTAGCATGCTTGACGCTTCTCAGATTATAACACTAGAATTCTCCCAGATTGAGAATGACAGACAGAGGGCTGAATTTATGTTTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

998

Amino Acids

110.52

Weight (kDa)

6.69

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1635, 1967, 2933
AatII GACGTC 1 cut(s) 2685
Acc65I GGTACC 1 cut(s) 353
AccB1I GGYRCC 1 cut(s) 353
AccB7I CCANNNNNTGG 1 cut(s) 2231
AccI GTMKAC 3 cut(s) 1438, 1767, 2685
AccII CGCG 1 cut(s) 2335
AccIII TCCGGA 1 cut(s) 793
AciI CCGC 1 cut(s) 2492
AclWI GGATC 3 cut(s) 480, 1360, 1462
AcoI YGGCCR 1 cut(s) 2391
AcuI CTGAAG 4 cut(s) 120, 960, 1176, 1592
AcyI GRCGYC 1 cut(s) 2682
AfaI GTAC 5 cut(s) 280, 355, 1934, 2360, 2729
AfiI CCNNNNNNNGG 7 cut(s) 414, 793, 926, 1307, 1955, 2231, 2368
AflIII ACRYGT 2 cut(s) 618, 1566
AhdI GACNNNNNGTC 2 cut(s) 148, 814
AhlI ACTAGT 2 cut(s) 194, 388
AjnI CCWGG 2 cut(s) 1729, 1842
AjuI GAANNNNNNNTTGG 1 cut(s) 2970
AleI CACNNNNGTG 1 cut(s) 56
Alw21I GWGCWC 1 cut(s) 1963
Alw26I GTCTC 3 cut(s) 801, 822, 2502
AlwI GGATC 3 cut(s) 480, 1360, 1462
AlwNI CAGNNNCTG 1 cut(s) 434
Aor13HI TCCGGA 1 cut(s) 793
AoxI GGCC 5 cut(s) 784, 1072, 1901, 2391, 2903
ApeKI GCWGC 2 cut(s) 1879, 2182
Asp718I GGTACC 1 cut(s) 353
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 4 cut(s) 785, 857, 1793, 2607
AsuHPI GGTGA 5 cut(s) 1699, 2246, 2446, 2677, 2754
AsuNHI GCTAGC 1 cut(s) 2866
AvaII GGWCC 3 cut(s) 857, 1793, 2607
BalI TGGCCA 1 cut(s) 2393
BanI GGYRCC 1 cut(s) 353
BarI GAAGNNNNNNTAC 2 cut(s) 2199, 2231
BbsI GAAGAC 1 cut(s) 1164
Bbv12I GWGCWC 1 cut(s) 1963
BbvI GCAGC 2 cut(s) 1891, 2169
BccI CCATC 8 cut(s) 153, 581, 586, 1121, 2225, 2301, 2801, 2864
BciT130I CCWGG 2 cut(s) 1731, 1844
BclI TGATCA 1 cut(s) 243
BcoDI GTCTC 3 cut(s) 801, 822, 2502
BcuI ACTAGT 2 cut(s) 194, 388
BfaI CTAG 9 cut(s) 195, 389, 653, 1890, 2409, 2534, 2867, 2907, 2939
BfmI CTRYAG 3 cut(s) 1869, 1877, 2686
BisI GCNGC 2 cut(s) 1880, 2183
BlpI GCTNAGC 1 cut(s) 2577
BlsI GCNGC 2 cut(s) 1881, 2184
Bme1390I CCNGG 2 cut(s) 1731, 1844
Bme18I GGWCC 3 cut(s) 857, 1793, 2607
BmeRI GACNNNNNGTC 2 cut(s) 148, 814
BmgT120I GGNCC 4 cut(s) 785, 857, 1793, 2607
BmiI GGNNCC 8 cut(s) 355, 521, 571, 643, 931, 1291, 1794, 1827
BmrFI CCNGG 2 cut(s) 1731, 1844
BmrI ACTGGG 1 cut(s) 716
BmsI GCATC 1 cut(s) 1546
BmtI GCTAGC 1 cut(s) 2870
BmuI ACTGGG 1 cut(s) 716
BpiI GAAGAC 1 cut(s) 1164
BplI GAGNNNNNCTC 2 cut(s) 2579, 2611
Bpu10I CCTNAGC 1 cut(s) 1302
Bpu1102I GCTNAGC 1 cut(s) 2577
BpuEI CTTGAG 5 cut(s) 338, 1111, 1428, 1490, 2606
BsaBI GATNNNNATC 1 cut(s) 1131
BsaHI GRCGYC 1 cut(s) 2682
BsaJI CCNNGG 2 cut(s) 1522, 1843
BsaWI WCCGGW 3 cut(s) 266, 793, 2791
Bsc4I CCNNNNNNNGG 7 cut(s) 414, 793, 926, 1307, 1955, 2231, 2368
Bse118I RCCGGY 1 cut(s) 107
Bse1I ACTGG 5 cut(s) 722, 1003, 1147, 1291, 2609
Bse3DI GCAATG 1 cut(s) 128
Bse8I GATNNNNATC 1 cut(s) 1131
BseAI TCCGGA 1 cut(s) 793
BseBI CCWGG 2 cut(s) 1731, 1844
BseDI CCNNGG 2 cut(s) 1522, 1843
BseGI GGATG 4 cut(s) 573, 1651, 2812, 2848
BseJI GATNNNNATC 1 cut(s) 1131
BseLI CCNNNNNNNGG 7 cut(s) 414, 793, 926, 1307, 1955, 2231, 2368
BseMI GCAATG 1 cut(s) 128
BseNI ACTGG 5 cut(s) 722, 1003, 1147, 1291, 2609
BseRI GAGGAG 2 cut(s) 2254, 2417
BseXI GCAGC 2 cut(s) 1891, 2169
BsgI GTGCAG 3 cut(s) 161, 1084, 1526
Bsh1236I CGCG 1 cut(s) 2335
BshFI GGCC 5 cut(s) 786, 1074, 1903, 2393, 2905
BshNI GGYRCC 1 cut(s) 353
BsiHKAI GWGCWC 1 cut(s) 1963
BsiSI CCGG 4 cut(s) 108, 267, 794, 2792
BslFI GGGAC 1 cut(s) 2473
BslI CCNNNNNNNGG 7 cut(s) 414, 793, 926, 1307, 1955, 2231, 2368
BsmAI GTCTC 3 cut(s) 801, 822, 2502
BsmFI GGGAC 1 cut(s) 2473
BsmI GAATGC 2 cut(s) 1420, 1838
BsnI GGCC 5 cut(s) 786, 1074, 1903, 2393, 2905
Bsp1286I GDGCHC 1 cut(s) 1963
Bsp13I TCCGGA 1 cut(s) 793
Bsp143I GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
Bsp1720I GCTNAGC 1 cut(s) 2577
Bsp68I TCGCGA 1 cut(s) 2335
BspACI CCGC 1 cut(s) 2492
BspANI GGCC 5 cut(s) 786, 1074, 1903, 2393, 2905
BspEI TCCGGA 1 cut(s) 793
BspFNI CGCG 1 cut(s) 2335
BspHI TCATGA 1 cut(s) 957
BspLI GGNNCC 8 cut(s) 355, 521, 571, 643, 931, 1291, 1794, 1827
BspMAI CTGCAG 1 cut(s) 1881
BspOI GCTAGC 1 cut(s) 2870
BspPI GGATC 3 cut(s) 480, 1360, 1462
BspT107I GGYRCC 1 cut(s) 353
BsrDI GCAATG 1 cut(s) 128
BsrFI RCCGGY 1 cut(s) 107
BsrI ACTGG 5 cut(s) 722, 1003, 1147, 1291, 2609
BssAI RCCGGY 1 cut(s) 107
BssECI CCNNGG 2 cut(s) 1522, 1843
BssMI GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
BssNAI GTATAC 1 cut(s) 1439
BssNI GRCGYC 1 cut(s) 2682
BssT1I CCWWGG 1 cut(s) 1522
Bst1107I GTATAC 1 cut(s) 1439
Bst2UI CCWGG 2 cut(s) 1731, 1844
Bst4CI ACNGT 5 cut(s) 425, 924, 2222, 2614, 2727
Bst6I CTCTTC 4 cut(s) 187, 825, 1644, 2143
BstACI GRCGYC 1 cut(s) 2682
BstC8I GCNNGC 7 cut(s) 636, 640, 1505, 2554, 2620, 2868, 2912
BstF5I GGATG 4 cut(s) 573, 1651, 2812, 2848
BstFNI CGCG 1 cut(s) 2335
BstHHI GCGC 1 cut(s) 115
BstKTI GATC 6 cut(s) 246, 331, 475, 1368, 1457, 1468
BstMAI GTCTC 3 cut(s) 801, 822, 2502
BstMBI GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
BstMWI GCNNNNNNNGC 7 cut(s) 104, 1393, 1402, 1618, 2587, 2781, 2911
BstNI CCWGG 2 cut(s) 1731, 1844
BstNSI RCATGY 6 cut(s) 622, 1570, 2041, 2476, 2888, 2914
BstSCI CCNGG 2 cut(s) 1729, 1842
BstSFI CTRYAG 3 cut(s) 1869, 1877, 2686
BstUI CGCG 1 cut(s) 2335
BstV1I GCAGC 2 cut(s) 1891, 2169
BstV2I GAAGAC 1 cut(s) 1164
BstX2I RGATCY 2 cut(s) 472, 1365
BstXI CCANNNNNNTGG 1 cut(s) 207
BstYI RGATCY 2 cut(s) 472, 1365
BstZ17I GTATAC 1 cut(s) 1439
BsuRI GGCC 5 cut(s) 786, 1074, 1903, 2393, 2905
BtsCI GGATG 4 cut(s) 573, 1651, 2812, 2848
BtsI GCAGTG 3 cut(s) 228, 1047, 2571
BtsIMutI CAGTG 7 cut(s) 228, 859, 920, 1047, 1140, 1284, 2571
BtuMI TCGCGA 1 cut(s) 2335
Cac8I GCNNGC 7 cut(s) 636, 640, 1505, 2554, 2620, 2868, 2912
CaiI CAGNNNCTG 1 cut(s) 434
CciI TCATGA 1 cut(s) 957
CfoI GCGC 1 cut(s) 115
Cfr10I RCCGGY 1 cut(s) 107
Cfr13I GGNCC 4 cut(s) 785, 857, 1793, 2607
CseI GACGC 2 cut(s) 2546, 2927
Csp6I GTAC 5 cut(s) 279, 354, 1933, 2359, 2728
CspCI CAANNNNNGTGG 4 cut(s) 516, 551, 1732, 1767
CviQI GTAC 5 cut(s) 279, 354, 1933, 2359, 2728
DpnI GATC 6 cut(s) 245, 330, 474, 1367, 1456, 1467
DpnII GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
DriI GACNNNNNGTC 2 cut(s) 148, 814
EaeI YGGCCR 1 cut(s) 2391
Eam1104I CTCTTC 4 cut(s) 187, 825, 1644, 2143
Eam1105I GACNNNNNGTC 2 cut(s) 148, 814
EarI CTCTTC 4 cut(s) 187, 825, 1644, 2143
Eco130I CCWWGG 1 cut(s) 1522
Eco147I AGGCCT 2 cut(s) 1903, 2905
Eco47I GGWCC 3 cut(s) 857, 1793, 2607
Eco57I CTGAAG 4 cut(s) 120, 960, 1176, 1592
EcoO109I RGGNCCY 1 cut(s) 785
EcoRI GAATTC 1 cut(s) 2942
EcoRII CCWGG 2 cut(s) 1729, 1842
EcoT14I CCWWGG 1 cut(s) 1522
EcoT22I ATGCAT 1 cut(s) 1539
ErhI CCWWGG 1 cut(s) 1522
FalI AAGNNNNNCTT 4 cut(s) 1375, 1407, 2243, 2275
FaqI GGGAC 1 cut(s) 2473
FauI CCCGC 1 cut(s) 2499
FbaI TGATCA 1 cut(s) 243
FblI GTMKAC 3 cut(s) 1438, 1767, 2685
Fnu4HI GCNGC 2 cut(s) 1880, 2183
FokI GGATG 4 cut(s) 560, 1658, 2819, 2855
Fsp4HI GCNGC 2 cut(s) 1880, 2183
FspBI CTAG 9 cut(s) 195, 389, 653, 1890, 2409, 2534, 2867, 2907, 2939
GlaI GCGC 1 cut(s) 114
GluI GCNGC 2 cut(s) 1880, 2183
HaeIII GGCC 5 cut(s) 786, 1074, 1903, 2393, 2905
HapII CCGG 4 cut(s) 108, 267, 794, 2792
HgaI GACGC 2 cut(s) 2546, 2927
HhaI GCGC 1 cut(s) 115
Hin1I GRCGYC 1 cut(s) 2682
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 2 cut(s) 1768, 2018
HindII GTYRAC 2 cut(s) 1768, 2018
HindIII AAGCTT 5 cut(s) 1034, 1087, 1403, 2309, 2579
HinfI GANTC 5 cut(s) 313, 1116, 1318, 2132, 2594
HpaII CCGG 4 cut(s) 108, 267, 794, 2792
HphI GGTGA 5 cut(s) 1699, 2246, 2446, 2677, 2754
Hpy99I CGWCG 2 cut(s) 307, 1769
HpyAV CCTTC 6 cut(s) 146, 701, 1377, 2656, 2774, 2825
HpyCH4III ACNGT 5 cut(s) 425, 924, 2222, 2614, 2727
HpyCH4IV ACGT 5 cut(s) 53, 87, 630, 2014, 2682
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 1393, 1402, 1618, 2587, 2781, 2911
HpySE526I ACGT 5 cut(s) 53, 87, 630, 2014, 2682
Hsp92I GRCGYC 1 cut(s) 2682
HspAI GCGC 1 cut(s) 113
Kpn2I TCCGGA 1 cut(s) 793
KpnI GGTACC 1 cut(s) 357
Ksp22I TGATCA 1 cut(s) 243
Kzo9I GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
LmnI GCTCC 5 cut(s) 538, 647, 1831, 1958, 2241
Lsp1109I GCAGC 2 cut(s) 1891, 2169
LweI GCATC 1 cut(s) 1546
MaeI CTAG 9 cut(s) 195, 389, 653, 1890, 2409, 2534, 2867, 2907, 2939
MaeII ACGT 5 cut(s) 53, 87, 630, 2014, 2682
MalI GATC 6 cut(s) 245, 330, 474, 1367, 1456, 1467
MboI GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
MfeI CAATTG 1 cut(s) 2496
MflI RGATCY 2 cut(s) 472, 1365
MhlI GDGCHC 1 cut(s) 1963
MlsI TGGCCA 1 cut(s) 2393
MluNI TGGCCA 1 cut(s) 2393
MlyI GAGTC 3 cut(s) 1125, 1312, 2588
MmeI TCCRAC 3 cut(s) 210, 1144, 2140
Mox20I TGGCCA 1 cut(s) 2393
Mph1103I ATGCAT 1 cut(s) 1539
MroI TCCGGA 1 cut(s) 793
MscI TGGCCA 1 cut(s) 2393
MseI TTAA 9 cut(s) 596, 605, 995, 1335, 2261, 2279, 2445, 2718, 2771
MslI CAYNNNNRTG 3 cut(s) 56, 233, 2481
Msp20I TGGCCA 1 cut(s) 2393
MspI CCGG 4 cut(s) 108, 267, 794, 2792
MspR9I CCNGG 2 cut(s) 1731, 1844
MunI CAATTG 1 cut(s) 2496
Mva1269I GAATGC 2 cut(s) 1420, 1838
MvaI CCWGG 2 cut(s) 1731, 1844
MvnI CGCG 1 cut(s) 2335
MwoI GCNNNNNNNGC 7 cut(s) 104, 1393, 1402, 1618, 2587, 2781, 2911
NdeII GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
NheI GCTAGC 1 cut(s) 2866
NlaIV GGNNCC 8 cut(s) 355, 521, 571, 643, 931, 1291, 1794, 1827
NmuCI GTSAC 8 cut(s) 150, 734, 911, 1687, 2033, 2665, 2678, 2760
NruI TCGCGA 1 cut(s) 2335
NsiI ATGCAT 1 cut(s) 1539
NspI RCATGY 6 cut(s) 622, 1570, 2041, 2476, 2888, 2914
OliI CACNNNNGTG 1 cut(s) 56
PaeI GCATGC 1 cut(s) 2914
PagI TCATGA 1 cut(s) 957
PceI AGGCCT 2 cut(s) 1903, 2905
PciI ACATGT 2 cut(s) 618, 1566
PcsI WCGNNNNNNNCGW 2 cut(s) 302, 308
PctI GAATGC 2 cut(s) 1420, 1838
PfeI GAWTC 2 cut(s) 313, 2132
PflFI GACNNNGTC 1 cut(s) 262
PflMI CCANNNNNTGG 1 cut(s) 2231
PkrI GCNGC 2 cut(s) 1881, 2184
PleI GAGTC 3 cut(s) 1124, 1312, 2588
PpsI GAGTC 3 cut(s) 1124, 1312, 2588
PscI ACATGT 2 cut(s) 618, 1566
PsiI TTATAA 3 cut(s) 1635, 1967, 2933
Psp6I CCWGG 2 cut(s) 1729, 1842
PspGI CCWGG 2 cut(s) 1729, 1842
PspN4I GGNNCC 8 cut(s) 355, 521, 571, 643, 931, 1291, 1794, 1827
PspPI GGNCC 4 cut(s) 785, 857, 1793, 2607
PstI CTGCAG 1 cut(s) 1881
PstNI CAGNNNCTG 1 cut(s) 434
PsuI RGATCY 2 cut(s) 472, 1365
PsyI GACNNNGTC 1 cut(s) 262
RruI TCGCGA 1 cut(s) 2335
RsaI GTAC 5 cut(s) 280, 355, 1934, 2360, 2729
RsaNI GTAC 5 cut(s) 279, 354, 1933, 2359, 2728
RseI CAYNNNNRTG 3 cut(s) 56, 233, 2481
SalI GTCGAC 1 cut(s) 1766
SaqAI TTAA 9 cut(s) 596, 605, 995, 1335, 2261, 2279, 2445, 2718, 2771
SatI GCNGC 2 cut(s) 1880, 2183
Sau3AI GATC 6 cut(s) 243, 328, 472, 1365, 1454, 1465
Sau96I GGNCC 4 cut(s) 785, 857, 1793, 2607
SchI GAGTC 3 cut(s) 1125, 1312, 2588
ScrFI CCNGG 2 cut(s) 1731, 1844
SduI GDGCHC 1 cut(s) 1963
SfaNI GCATC 1 cut(s) 1546
SfcI CTRYAG 3 cut(s) 1869, 1877, 2686
SinI GGWCC 3 cut(s) 857, 1793, 2607
SmiMI CAYNNNNRTG 3 cut(s) 56, 233, 2481
SmlI CTYRAG 5 cut(s) 317, 1090, 1443, 1469, 2585
SmoI CTYRAG 5 cut(s) 317, 1090, 1443, 1469, 2585
SpeI ACTAGT 2 cut(s) 194, 388
SphI GCATGC 1 cut(s) 2914
SseBI AGGCCT 2 cut(s) 1903, 2905
SsiI CCGC 1 cut(s) 2492
SspI AATATT 2 cut(s) 802, 2740
SspMI CTAG 9 cut(s) 195, 389, 653, 1890, 2409, 2534, 2867, 2907, 2939
StuI AGGCCT 2 cut(s) 1903, 2905
StyD4I CCNGG 2 cut(s) 1729, 1842
StyI CCWWGG 1 cut(s) 1522
TaaI ACNGT 5 cut(s) 425, 924, 2222, 2614, 2727
TaiI ACGT 5 cut(s) 56, 90, 633, 2017, 2685
TaqI TCGA 5 cut(s) 1767, 1910, 2072, 2296, 2506
TaqII GACCGA 1 cut(s) 138
TatI WGTACW 1 cut(s) 1932
TfiI GAWTC 2 cut(s) 313, 2132
Tru1I TTAA 9 cut(s) 596, 605, 995, 1335, 2261, 2279, 2445, 2718, 2771
Tru9I TTAA 9 cut(s) 596, 605, 995, 1335, 2261, 2279, 2445, 2718, 2771
TscAI CASTG 7 cut(s) 235, 859, 927, 1054, 1147, 1291, 2578
TseFI GTSAC 8 cut(s) 150, 734, 911, 1687, 2033, 2665, 2678, 2760
TseI GCWGC 2 cut(s) 1879, 2182
Tsp45I GTSAC 8 cut(s) 150, 734, 911, 1687, 2033, 2665, 2678, 2760
TspRI CASTG 7 cut(s) 235, 859, 927, 1054, 1147, 1291, 2578
Tth111I GACNNNGTC 1 cut(s) 262
Van91I CCANNNNNTGG 1 cut(s) 2231
VpaK11BI GGWCC 3 cut(s) 857, 1793, 2607
XceI RCATGY 6 cut(s) 622, 1570, 2041, 2476, 2888, 2914
XmiI GTMKAC 3 cut(s) 1438, 1767, 2685
XspI CTAG 9 cut(s) 195, 389, 653, 1890, 2409, 2534, 2867, 2907, 2939
ZraI GACGTC 1 cut(s) 2683
Zsp2I ATGCAT 1 cut(s) 1539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.