Rorug04G0097500

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
15333942 .. 15338880
4939 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0097500.1

Sequence Viewer

Length: 2124 bp
ATGTCAGAGGATTTCCAGGAGGAACCTGCACATGAAGTAGAAGGGCCATTTGAAAGCAGGCTGCAGACATCTCATCCATTACCAGATGGCCTGGGAGCACAAGTGATAGCTCTCTTCACGAGTACTTTTCGCGAACCAAAGAAGATAGATAATAAAATTCCACCAAAAGTACAAGCAACAACACCTGCTAAATGGGCTCAGAGTGCTCCAACTCAAGAACGTACAAATATATCTAGCGATGTACTAAGAAAAGATCAGAAGGATGTTACACATACTCCAGAAAACAATGCCACAGCAACACCAACTATCATAAACACCAACCTAGTTCCGTACGTGACACTACATCTTGCTGCTCTGAATGGTGACTGGATGACTGCTAGAAATTTCTTGCAATTACAGCCAGAAGCTGTGAGGGCTAAGATCACAAAGGGTTCAGAAACTGCTCTTCACATTTCAGCTGGGGCAAAACGTACACTTTTTGTTGAGGAGCTAGTAAAATGGATGACACCAAATGACCTTGAATTGAAGAATGATGTAGGAAACACCGCCCTTTATTTTGCTGCTGTATCTGGTATCAAAAGGATTGCTGAGGTAATGGTGGATGTTAACCCAAGATTACCTCAGATCCGAGGTACTAAAGATCTAACACCTCTTCATATGGCTACATTGCTAGGCCACAAAGAAATTGTATGGTATCTATACGATAAGACAATTTTGACAGAACAAGATTACATAGGGCTTCTTATTTCTGCCATAACAGCAGATCTTTATGATGTAGCACTGGATATAATTCAAAAGCACCCTGAAATGGCTTTTGCTCGAGATAGAAATGGAGAGACAGCACTACATGTATTGGCTCGAAAGCCTTCAGCATGTTATAGTGGAAGTCAGCTGGGATCTTTGCAACGATGGATAACTTCGTATGTGGCTATGGATATAGTTGAACAACACCCTGAAATGACTTCTGTTCAAGATGAAATTGTGGAGACTACACTCCAAATAGTGGAGCCTTCGGCATGTTATAGTGGAAATCAGCTGGGACTTTGGAAACGATTGATATTATCTGTCCCCAATATCCAGGTCTCATACGACAAAAAGTTGAATCATATGCAAGCAACTGAACTTGTGAAGCTGCTTTGGAAAAAAGTTTTGACACTAGGGAGTGATTTGGGGATAAATGATTTGATCAATGTACCCTCTCGCTTATTGTTTACTGCTGCTGAATTGGGGAATATAGAGTTTCTCATTATACTTGTTAGATCGTACCCCAGTCTCATTTGGCAAGTTGATGAACAAAACCGAAGCATATTTCATGCTGCATTGATTCATCGACAGGAAAAAGTTTTCAATCTCATTTATGAATTAGGCGGTCTGAAAGACTTAATAGCCTCTTATAAAGATGTAAACAACAATAACATGCTTCATATGGCTGCACGAGCATCTCCAAATCGACTAAGTATTGATACAGGGGCAGCATTGAAATTGCGAAGAGAGTTGACTTGGTTTAAGGAGGTGGAGAAGATTGTCCAGCCATTATACAAAGAAATGAGGAACTCAGATGGAGAAACACCTCAACTTCTTTTCACCAAGGAACACAAGGAACTACTACGACAAGGAGAAGAGTGGATGAAGGGCACTGCATCATCATGCATGGTTGTGGCAACTCTTATTGCCACTGTAATGTTTTCTGTCTTCTCCACTATCCCCGGTGGCAACAACAATAACACAGGCATTCCCATATTCCTTAAATCAAGGGCCTTCACGGTTTTTGTCATATCAGATTCAATATCCCTCATCTCATCGACCACTTCAATGTTGAGTTTTCTGTCCATTCTTACATCACGCTACACTGAAGGAGATTTTCTCAATTCATTACCGAATAGATTGATCGTGGGGCTTGCTACCTTATTTATCTCTATGGCTACAATGATGATGACATTTGTTGCCACACTTCTTATGGTTCTTGGCCCTGGATTTCATGAGATAAAATTTCCAGTTGCTTTGGTTGCTGCAGTTCCAGTTGGTTTCTACGCGTTACTACAGTTTCCTCTTCTAGCAGATATGATCTGTCATGCTTATATCCCAAGAGTTTCTTTTCGTCCATGCAACCACCTCCTGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

707

Amino Acids

79.02

Weight (kDa)

6.46

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 114 - 201 4.2e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 163 - 237 3.1e-08 Ankyrin repeats (3 copies)
PGG PF13962 540 - 653 7.9e-24 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1395
AarI CACCTGC 1 cut(s) 193
Acc36I ACCTGC 2 cut(s) 34, 193
AccB7I CCANNNNNTGG 1 cut(s) 1003
AccII CGCG 2 cut(s) 132, 2033
AciI CCGC 2 cut(s) 546, 1368
AclWI GGATC 2 cut(s) 619, 904
AcsI RAATTY 3 cut(s) 156, 382, 1988
AcuI CTGAAG 2 cut(s) 852, 1872
AfaI GTAC 9 cut(s) 124, 171, 223, 243, 332, 472, 634, 1194, 1265
AfiI CCNNNNNNNGG 2 cut(s) 808, 1003
AflIII ACRYGT 2 cut(s) 847, 2031
AjnI CCWGG 4 cut(s) 15, 90, 1077, 1969
AluBI AGCT 7 cut(s) 110, 407, 458, 490, 892, 1036, 1132
AluI AGCT 7 cut(s) 110, 407, 458, 490, 892, 1036, 1132
Alw21I GWGCWC 2 cut(s) 100, 208
Alw26I GTCTC 4 cut(s) 830, 980, 1087, 1277
AlwI GGATC 2 cut(s) 619, 904
AlwNI CAGNNNCTG 2 cut(s) 407, 440
Ama87I CYCGRG 1 cut(s) 819
AoxI GGCC 5 cut(s) 44, 88, 673, 1755, 1966
ApeKI GCWGC 9 cut(s) 61, 350, 560, 1132, 1217, 1316, 1430, 1472, 2009
ApoI RAATTY 3 cut(s) 156, 382, 1988
Asp700I GAANNNNTTC 1 cut(s) 865
AspS9I GGNCC 3 cut(s) 44, 1755, 1967
AsuC2I CCSGG 1 cut(s) 1707
AsuHPI GGTGA 2 cut(s) 374, 1576
AvaI CYCGRG 1 cut(s) 819
BaeGI GKGCMC 1 cut(s) 1637
BanII GRGCYC 1 cut(s) 199
BauI CACGAG 2 cut(s) 118, 1434
BbsI GAAGAC 1 cut(s) 1684
Bbv12I GWGCWC 2 cut(s) 100, 208
BbvCI CCTCAGC 1 cut(s) 588
BbvI GCAGC 9 cut(s) 48, 337, 547, 1119, 1204, 1303, 1417, 1484, 1996
BccI CCATC 3 cut(s) 80, 903, 1553
BciT130I CCWGG 4 cut(s) 17, 92, 1079, 1971
BclI TGATCA 1 cut(s) 1185
BcnI CCSGG 1 cut(s) 1707
BcoDI GTCTC 4 cut(s) 830, 980, 1087, 1277
BfaI CTAG 8 cut(s) 234, 323, 378, 491, 671, 1157, 2054, 2122
BfmI CTRYAG 3 cut(s) 62, 2010, 2039
BfuAI ACCTGC 2 cut(s) 34, 193
BglII AGATCT 2 cut(s) 640, 763
BisI GCNGC 9 cut(s) 62, 351, 561, 1133, 1218, 1317, 1431, 1473, 2010
BlsI GCNGC 9 cut(s) 63, 352, 562, 1134, 1219, 1318, 1432, 1474, 2011
BmcAI AGTACT 1 cut(s) 124
Bme1390I CCNGG 5 cut(s) 17, 92, 1079, 1707, 1971
BmeT110I CYCGRG 1 cut(s) 819
BmgT120I GGNCC 3 cut(s) 44, 1755, 1967
BmiI GGNNCC 2 cut(s) 24, 1008
BmrFI CCNGG 5 cut(s) 17, 92, 1079, 1707, 1971
BmrI ACTGGG 1 cut(s) 1263
BmsI GCATC 2 cut(s) 1448, 1649
BmuI ACTGGG 1 cut(s) 1263
BpiI GAAGAC 1 cut(s) 1684
BplI GAGNNNNNCTC 2 cut(s) 1848, 1880
BpmI CTGGAG 1 cut(s) 261
Bpu10I CCTNAGC 1 cut(s) 588
BpuEI CTTGAG 1 cut(s) 198
BpuMI CCSGG 1 cut(s) 1707
BsaAI YACGTR 1 cut(s) 334
BsaI GGTCTC 1 cut(s) 1087
BsaJI CCNNGG 5 cut(s) 91, 628, 1587, 1705, 1969
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 259, 289
Bsc4I CCNNNNNNNGG 2 cut(s) 808, 1003
Bse1I ACTGG 5 cut(s) 371, 786, 1269, 1994, 2018
Bse3DI GCAATG 1 cut(s) 665
BseBI CCWGG 4 cut(s) 17, 92, 1079, 1971
BseDI CCNNGG 5 cut(s) 91, 628, 1587, 1705, 1969
BseGI GGATG 6 cut(s) 73, 268, 375, 507, 607, 1632
BseLI CCNNNNNNNGG 2 cut(s) 808, 1003
BseMI GCAATG 1 cut(s) 665
BseMII CTCAG 4 cut(s) 212, 579, 635, 1569
BseNI ACTGG 5 cut(s) 371, 786, 1269, 1994, 2018
BseRI GAGGAG 1 cut(s) 500
BseSI GKGCMC 1 cut(s) 1637
BseXI GCAGC 9 cut(s) 48, 337, 547, 1119, 1204, 1303, 1417, 1484, 1996
BseYI CCCAGC 3 cut(s) 458, 892, 1036
BsgI GTGCAG 3 cut(s) 12, 1416, 2102
Bsh1236I CGCG 2 cut(s) 132, 2033
BshFI GGCC 5 cut(s) 46, 90, 675, 1757, 1968
BsiHKAI GWGCWC 2 cut(s) 100, 208
BsiHKCI CYCGRG 1 cut(s) 819
BsiSI CCGG 1 cut(s) 1707
BsiWI CGTACG 1 cut(s) 330
BslFI GGGAC 2 cut(s) 1052, 1053
BslI CCNNNNNNNGG 2 cut(s) 808, 1003
BsmAI GTCTC 4 cut(s) 830, 980, 1087, 1277
BsmFI GGGAC 2 cut(s) 1052, 1053
BsmI GAATGC 1 cut(s) 1731
BsnI GGCC 5 cut(s) 46, 90, 675, 1757, 1968
Bso31I GGTCTC 1 cut(s) 1087
BsoBI CYCGRG 1 cut(s) 819
Bsp1286I GDGCHC 4 cut(s) 100, 199, 208, 1637
Bsp68I TCGCGA 1 cut(s) 132
BspACI CCGC 2 cut(s) 546, 1368
BspANI GGCC 5 cut(s) 46, 90, 675, 1757, 1968
BspCNI CTCAG 4 cut(s) 211, 580, 634, 1568
BspFNI CGCG 2 cut(s) 132, 2033
BspHI TCATGA 1 cut(s) 1978
BspLI GGNNCC 2 cut(s) 24, 1008
BspMAI CTGCAG 2 cut(s) 66, 2014
BspMI ACCTGC 2 cut(s) 34, 193
BspPI GGATC 2 cut(s) 619, 904
BspQI GCTCTTC 1 cut(s) 450
BspTNI GGTCTC 1 cut(s) 1087
BsrDI GCAATG 1 cut(s) 665
BsrI ACTGG 5 cut(s) 371, 786, 1269, 1994, 2018
BssECI CCNNGG 5 cut(s) 91, 628, 1587, 1705, 1969
BssSI CACGAG 2 cut(s) 118, 1434
BssT1I CCWWGG 1 cut(s) 1587
Bst2BI CACGAG 2 cut(s) 118, 1434
Bst2UI CCWGG 4 cut(s) 17, 92, 1079, 1971
Bst4CI ACNGT 3 cut(s) 1678, 1765, 2043
Bst6I CTCTTC 6 cut(s) 119, 450, 657, 1483, 1614, 2055
BstBAI YACGTR 1 cut(s) 334
BstC8I GCNNGC 3 cut(s) 59, 1113, 1899
BstDEI CTNAG 7 cut(s) 198, 245, 417, 588, 621, 1454, 1555
BstF5I GGATG 6 cut(s) 73, 268, 375, 507, 607, 1632
BstFNI CGCG 2 cut(s) 132, 2033
BstMAI GTCTC 4 cut(s) 830, 980, 1087, 1277
BstMWI GCNNNNNNNGC 7 cut(s) 194, 203, 397, 413, 758, 1436, 2006
BstNI CCWGG 4 cut(s) 17, 92, 1079, 1971
BstNSI RCATGY 4 cut(s) 851, 876, 1020, 1420
BstSCI CCNGG 5 cut(s) 15, 90, 1077, 1705, 1969
BstSFI CTRYAG 3 cut(s) 62, 2010, 2039
BstSLI GKGCMC 1 cut(s) 1637
BstUI CGCG 2 cut(s) 132, 2033
BstV1I GCAGC 9 cut(s) 48, 337, 547, 1119, 1204, 1303, 1417, 1484, 1996
BstV2I GAAGAC 1 cut(s) 1684
BstX2I RGATCY 4 cut(s) 624, 640, 763, 896
BstYI RGATCY 4 cut(s) 624, 640, 763, 896
BsuRI GGCC 5 cut(s) 46, 90, 675, 1757, 1968
BtgZI GCGATG 1 cut(s) 252
BtsCI GGATG 6 cut(s) 73, 268, 375, 507, 607, 1632
BtsI GCAGTG 1 cut(s) 1635
BtsIMutI CAGTG 4 cut(s) 779, 1635, 1674, 1848
BtuMI TCGCGA 1 cut(s) 132
BveI ACCTGC 2 cut(s) 34, 193
Cac8I GCNNGC 3 cut(s) 59, 1113, 1899
CaiI CAGNNNCTG 2 cut(s) 407, 440
CciI TCATGA 1 cut(s) 1978
Cfr13I GGNCC 3 cut(s) 44, 1755, 1967
Csp6I GTAC 9 cut(s) 123, 170, 222, 242, 331, 471, 633, 1193, 1264
CviQI GTAC 9 cut(s) 123, 170, 222, 242, 331, 471, 633, 1193, 1264
DdeI CTNAG 7 cut(s) 198, 245, 417, 588, 621, 1454, 1555
Eam1104I CTCTTC 6 cut(s) 119, 450, 657, 1483, 1614, 2055
EarI CTCTTC 6 cut(s) 119, 450, 657, 1483, 1614, 2055
Eco130I CCWWGG 1 cut(s) 1587
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 1 cut(s) 1087
Eco57I CTGAAG 2 cut(s) 852, 1872
Eco88I CYCGRG 1 cut(s) 819
EcoO109I RGGNCCY 1 cut(s) 1755
EcoRII CCWGG 4 cut(s) 15, 90, 1077, 1969
EcoT14I CCWWGG 1 cut(s) 1587
EcoT22I ATGCAT 1 cut(s) 1652
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 1587
FalI AAGNNNNNCTT 2 cut(s) 2077, 2109
FaqI GGGAC 2 cut(s) 1052, 1053
FauNDI CATATG 3 cut(s) 657, 1107, 1425
FbaI TGATCA 1 cut(s) 1185
Fnu4HI GCNGC 9 cut(s) 62, 351, 561, 1133, 1218, 1317, 1431, 1473, 2010
FokI GGATG 6 cut(s) 60, 275, 382, 514, 614, 1639
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 9 cut(s) 62, 351, 561, 1133, 1218, 1317, 1431, 1473, 2010
FspBI CTAG 8 cut(s) 234, 323, 378, 491, 671, 1157, 2054, 2122
GluI GCNGC 9 cut(s) 62, 351, 561, 1133, 1218, 1317, 1431, 1473, 2010
GsaI CCCAGC 3 cut(s) 462, 896, 1040
GsuI CTGGAG 1 cut(s) 261
HaeIII GGCC 5 cut(s) 46, 90, 675, 1757, 1968
HapII CCGG 1 cut(s) 1707
HincII GTYRAC 2 cut(s) 607, 1497
HindII GTYRAC 2 cut(s) 607, 1497
HinfI GANTC 3 cut(s) 1102, 1324, 1781
HpaI GTTAAC 1 cut(s) 607
HpaII CCGG 1 cut(s) 1707
HphI GGTGA 2 cut(s) 374, 1576
Hpy166II GTNNAC 5 cut(s) 473, 607, 1212, 1405, 1497
Hpy188III TCNNGA 7 cut(s) 118, 131, 215, 278, 821, 971, 1979
Hpy8I GTNNAC 5 cut(s) 473, 607, 1212, 1405, 1497
HpyAV CCTTC 7 cut(s) 35, 253, 876, 1020, 1624, 1768, 1847
HpyCH4III ACNGT 3 cut(s) 1678, 1765, 2043
HpyCH4IV ACGT 3 cut(s) 220, 333, 469
HpyF10VI GCNNNNNNNGC 7 cut(s) 194, 203, 397, 413, 758, 1436, 2006
HpyF3I CTNAG 7 cut(s) 198, 245, 417, 588, 621, 1454, 1555
HpySE526I ACGT 3 cut(s) 220, 333, 469
Ksp22I TGATCA 1 cut(s) 1185
KspAI GTTAAC 1 cut(s) 607
LguI GCTCTTC 1 cut(s) 450
LmnI GCTCC 4 cut(s) 95, 211, 487, 1006
Lsp1109I GCAGC 9 cut(s) 48, 337, 547, 1119, 1204, 1303, 1417, 1484, 1996
LweI GCATC 2 cut(s) 1448, 1649
MaeI CTAG 8 cut(s) 234, 323, 378, 491, 671, 1157, 2054, 2122
MaeII ACGT 3 cut(s) 220, 333, 469
MaeIII GTNAC 4 cut(s) 265, 334, 362, 2034
MflI RGATCY 4 cut(s) 624, 640, 763, 896
MhlI GDGCHC 4 cut(s) 100, 199, 208, 1637
MluI ACGCGT 1 cut(s) 2031
MmeI TCCRAC 1 cut(s) 233
Mph1103I ATGCAT 1 cut(s) 1652
MroXI GAANNNNTTC 1 cut(s) 865
MseI TTAA 4 cut(s) 606, 1382, 1506, 1746
MslI CAYNNNNRTG 4 cut(s) 1645, 1655, 1679, 1811
MspA1I CMGCKG 3 cut(s) 458, 892, 1036
MspI CCGG 1 cut(s) 1707
MspR9I CCNGG 5 cut(s) 17, 92, 1079, 1707, 1971
Mva1269I GAATGC 1 cut(s) 1731
MvaI CCWGG 4 cut(s) 17, 92, 1079, 1971
MvnI CGCG 2 cut(s) 132, 2033
MwoI GCNNNNNNNGC 7 cut(s) 194, 203, 397, 413, 758, 1436, 2006
NciI CCSGG 1 cut(s) 1707
NdeI CATATG 3 cut(s) 657, 1107, 1425
NlaIV GGNNCC 2 cut(s) 24, 1008
NmuCI GTSAC 2 cut(s) 334, 362
NruI TCGCGA 1 cut(s) 132
NsiI ATGCAT 1 cut(s) 1652
NspI RCATGY 4 cut(s) 851, 876, 1020, 1420
PaeR7I CTCGAG 1 cut(s) 819
PagI TCATGA 1 cut(s) 1978
PaqCI CACCTGC 1 cut(s) 193
PciI ACATGT 1 cut(s) 847
PciSI GCTCTTC 1 cut(s) 450
PctI GAATGC 1 cut(s) 1731
PdmI GAANNNNTTC 1 cut(s) 865
PfeI GAWTC 3 cut(s) 1102, 1324, 1781
Pfl23II CGTACG 1 cut(s) 330
PflMI CCANNNNNTGG 1 cut(s) 1003
PfoI TCCNGGA 1 cut(s) 15
PkrI GCNGC 9 cut(s) 63, 352, 562, 1134, 1219, 1318, 1432, 1474, 2011
Ppu21I YACGTR 1 cut(s) 334
PscI ACATGT 1 cut(s) 847
PsiI TTATAA 1 cut(s) 1395
Psp6I CCWGG 4 cut(s) 15, 90, 1077, 1969
PspFI CCCAGC 3 cut(s) 458, 892, 1036
PspGI CCWGG 4 cut(s) 15, 90, 1077, 1969
PspLI CGTACG 1 cut(s) 330
PspN4I GGNNCC 2 cut(s) 24, 1008
PspPI GGNCC 3 cut(s) 44, 1755, 1967
PstI CTGCAG 2 cut(s) 66, 2014
PstNI CAGNNNCTG 2 cut(s) 407, 440
PsuI RGATCY 4 cut(s) 624, 640, 763, 896
PvuII CAGCTG 3 cut(s) 458, 892, 1036
RruI TCGCGA 1 cut(s) 132
RsaI GTAC 9 cut(s) 124, 171, 223, 243, 332, 472, 634, 1194, 1265
RsaNI GTAC 9 cut(s) 123, 170, 222, 242, 331, 471, 633, 1193, 1264
RseI CAYNNNNRTG 4 cut(s) 1645, 1655, 1679, 1811
SapI GCTCTTC 1 cut(s) 450
SaqAI TTAA 4 cut(s) 606, 1382, 1506, 1746
SatI GCNGC 9 cut(s) 62, 351, 561, 1133, 1218, 1317, 1431, 1473, 2010
Sau96I GGNCC 3 cut(s) 44, 1755, 1967
ScaI AGTACT 1 cut(s) 124
ScrFI CCNGG 5 cut(s) 17, 92, 1079, 1707, 1971
SduI GDGCHC 4 cut(s) 100, 199, 208, 1637
SfaNI GCATC 2 cut(s) 1448, 1649
SfcI CTRYAG 3 cut(s) 62, 2010, 2039
Sfr274I CTCGAG 1 cut(s) 819
SlaI CTCGAG 1 cut(s) 819
SmiMI CAYNNNNRTG 4 cut(s) 1645, 1655, 1679, 1811
SmlI CTYRAG 2 cut(s) 213, 819
SmoI CTYRAG 2 cut(s) 213, 819
SsiI CCGC 2 cut(s) 546, 1368
SspMI CTAG 8 cut(s) 234, 323, 378, 491, 671, 1157, 2054, 2122
StyD4I CCNGG 5 cut(s) 15, 90, 1077, 1705, 1969
StyI CCWWGG 1 cut(s) 1587
TaaI ACNGT 3 cut(s) 1678, 1765, 2043
TaiI ACGT 3 cut(s) 223, 336, 472
TaqI TCGA 5 cut(s) 820, 859, 1330, 1450, 1802
TatI WGTACW 3 cut(s) 122, 169, 241
TfiI GAWTC 3 cut(s) 1102, 1324, 1781
Tru1I TTAA 4 cut(s) 606, 1382, 1506, 1746
Tru9I TTAA 4 cut(s) 606, 1382, 1506, 1746
TscAI CASTG 4 cut(s) 786, 1642, 1681, 1855
TseFI GTSAC 2 cut(s) 334, 362
TseI GCWGC 9 cut(s) 61, 350, 560, 1132, 1217, 1316, 1430, 1472, 2009
Tsp45I GTSAC 2 cut(s) 334, 362
TspGWI ACGGA 1 cut(s) 318
TspRI CASTG 4 cut(s) 786, 1642, 1681, 1855
Van91I CCANNNNNTGG 1 cut(s) 1003
XapI RAATTY 3 cut(s) 156, 382, 1988
XceI RCATGY 4 cut(s) 851, 876, 1020, 1420
XcmI CCANNNNNNNNNTGG 1 cut(s) 1954
XhoI CTCGAG 1 cut(s) 819
XmnI GAANNNNTTC 1 cut(s) 865
XspI CTAG 8 cut(s) 234, 323, 378, 491, 671, 1157, 2054, 2122
ZrmI AGTACT 1 cut(s) 124
Zsp2I ATGCAT 1 cut(s) 1652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.