MD04G1006800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
820544 .. 822314
1771 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1006800.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGGTCTCTTTGCAACTTCAGTCCAATGAACTCAGTGGGGAGATTCCTCAGAATCTAGGCAAATTATCTCAGCTTGAGCTGCTCGATTTGTCGTACAACAACTTGAAAGGAGTGATCCCACGGATTCTAGGATTAAGATTAAAGGTTCTCAATATCTCACACAACCATCTTTCAGGTCAAATCCCATCATTTGTCGACATGTTGCTTCTTCGTGACATCAATTTTTCTTATAACAACTTGACTGGCCCAATCCCAGAAGTTTTCGTATGGGAACCCGAAAATGCTTTTGTTGGAAACTCTGGCTTGTGTGGCTATGTAGAGTGTGTAGACACTGTACCCCCTCGGCACAACATACCCCCTCGGCACAACAGAAATTTCAAAAAGAATAACAAAAGAGTTCTAATTGGTATCCTTGTGCCTGTTTGTGGTTTATTAATGGTTACAACTGAAGTAAAGTTTACGTTTGCGGAAGTTGTGAAGGCTGTAGATGACTTTCATGAGAAGTACTGCATTGGGACAGGAGGGTTTGGAAGGGTTTACAAGGCAGAGCTGCAATCAGGCCAAGTAGTTGCAGTTAAAAGGCTTAACATGTCAGACTCTAATGATATTCCAGCAATCAATCTCCATAGCTTTCAGAATGAAATCCGAACTTTGACAAGCATCCGGCACCGGAACATCATAAGGCTCTATGGCTTCTGTTCAAGGAGGGGTTGCATATTCCTGCTTTATGAATACTTAGAGAGAGGAAGCCTGGGAAAAGCTTTGTATGGAGTTGAAGGTGTTAATGAACTTGTCTGGGCTACTAGAGTCAAAATTGTGCAAGGACTTGCTCATGCACTTTCTTACTTGCACCATGATTGCTCTCCACCAATTGTGCACCGTGACATAACCGTCAACAATGTATTGCTTGAGTCTGATTTCGAGGTTCGTCTCTCAGATTTCGGAATAGCCAGGTTATTGAGTACTGATTCATCCAACTGGACAAGTATTGCTGGTTCATTTGGCTACATAGCACCAGAGCTTGCATACACTATGCGAGTCACGGATAAATGTGATGTATATAGCTTTGGAGTGGTGGCGCTCGAAGTCATGATGGGAAGGCACCCAGGGGATATGCTAGAGTCCCAGCTACAAGAATCATCAAAATCAAGGAGGGACAATGTAGAATTGCTGCTGAAAGATTTGTTAGACCAAAGGTTAGAGCCGCCAACCAATGAATCTGCAAAGGCAATGGTGCTAGTAGTGACAATGGCCTTGGCCTGTATACGAACGCGTCCTGCGTCCAGACCCACGATGTTATTTGTGGCACAAAAACTGTCAGCTCAAACCCTGCCTTGCCTTCCCGAACCATTTGGTATGTTGACAATCAACAAGCTAATGGCACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

463

Amino Acids

51.66

Weight (kDa)

8.0

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 166 - 432 1.9e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 170 - 438 3.6e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 231
AasI GACNNNNNNGTC 1 cut(s) 890
AccB1I GGYRCC 2 cut(s) 666, 1101
AccI GTMKAC 3 cut(s) 195, 327, 1264
AccII CGCG 1 cut(s) 1273
AciI CCGC 2 cut(s) 467, 1205
AclWI GGATC 1 cut(s) 109
AcsI RAATTY 1 cut(s) 373
AcuI CTGAAG 1 cut(s) 468
AfaI GTAC 4 cut(s) 95, 336, 506, 964
AfiI CCNNNNNNNGG 1 cut(s) 425
AflIII ACRYGT 3 cut(s) 198, 588, 1271
AgsI TTSAA 4 cut(s) 106, 379, 702, 776
AjnI CCWGG 3 cut(s) 750, 950, 1105
Alw21I GWGCWC 1 cut(s) 879
Alw26I GTCTC 2 cut(s) 10, 935
Alw44I GTGCAC 1 cut(s) 875
AlwI GGATC 1 cut(s) 109
AoxI GGCC 4 cut(s) 244, 559, 1251, 1257
ApaLI GTGCAC 1 cut(s) 875
ApeKI GCWGC 3 cut(s) 79, 550, 1171
ApoI RAATTY 1 cut(s) 373
AseI ATTAAT 1 cut(s) 434
AspLEI GCGC 1 cut(s) 1081
AspS9I GGNCC 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 879
BanI GGYRCC 2 cut(s) 666, 1101
Bbv12I GWGCWC 1 cut(s) 879
BbvI GCAGC 3 cut(s) 66, 537, 1158
BccI CCATC 3 cut(s) 174, 193, 1087
BciT130I CCWGG 3 cut(s) 752, 952, 1107
BciVI GTATCC 1 cut(s) 419
BcoDI GTCTC 2 cut(s) 10, 935
BfaI CTAG 5 cut(s) 56, 128, 804, 1118, 1238
BfmI CTRYAG 1 cut(s) 483
BfoI RGCGCY 1 cut(s) 1082
BfuI GTATCC 1 cut(s) 419
BisI GCNGC 4 cut(s) 80, 551, 1172, 1205
BlsI GCNGC 4 cut(s) 81, 552, 1173, 1206
BmcAI AGTACT 2 cut(s) 506, 964
Bme1390I CCNGG 3 cut(s) 752, 952, 1107
BmgT120I GGNCC 1 cut(s) 245
BmiI GGNNCC 3 cut(s) 273, 668, 1103
BmrFI CCNGG 3 cut(s) 752, 952, 1107
BmsI GCATC 1 cut(s) 669
BpuEI CTTGAG 2 cut(s) 95, 929
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 7 cut(s) 119, 341, 359, 751, 1105, 1106, 1254
BsaWI WCCGGW 1 cut(s) 669
Bsc4I CCNNNNNNNGG 1 cut(s) 425
Bse1I ACTGG 2 cut(s) 247, 983
Bse3DI GCAATG 1 cut(s) 1236
BseBI CCWGG 3 cut(s) 752, 952, 1107
BseDI CCNNGG 7 cut(s) 119, 341, 359, 751, 1105, 1106, 1254
BseGI GGATG 2 cut(s) 660, 971
BseLI CCNNNNNNNGG 1 cut(s) 425
BseMI GCAATG 1 cut(s) 1236
BseMII CTCAG 4 cut(s) 46, 62, 83, 948
BseNI ACTGG 2 cut(s) 247, 983
BseSI GKGCMC 1 cut(s) 879
BseXI GCAGC 3 cut(s) 66, 537, 1158
BseYI CCCAGC 1 cut(s) 1125
Bsh1236I CGCG 1 cut(s) 1273
BshFI GGCC 4 cut(s) 246, 561, 1253, 1259
BshNI GGYRCC 2 cut(s) 666, 1101
BsiHKAI GWGCWC 1 cut(s) 879
BsiSI CCGG 2 cut(s) 664, 670
BslFI GGGAC 3 cut(s) 529, 1108, 1169
BslI CCNNNNNNNGG 1 cut(s) 425
BsmAI GTCTC 2 cut(s) 10, 935
BsmBI CGTCTC 1 cut(s) 935
BsmFI GGGAC 3 cut(s) 529, 1108, 1169
BsnI GGCC 4 cut(s) 246, 561, 1253, 1259
Bso31I GGTCTC 1 cut(s) 10
Bsp1286I GDGCHC 1 cut(s) 879
Bsp143I GATC 1 cut(s) 114
BspACI CCGC 2 cut(s) 467, 1205
BspANI GGCC 4 cut(s) 246, 561, 1253, 1259
BspCNI CTCAG 4 cut(s) 45, 61, 82, 947
BspFNI CGCG 1 cut(s) 1273
BspHI TCATGA 2 cut(s) 496, 1089
BspLI GGNNCC 3 cut(s) 273, 668, 1103
BspPI GGATC 1 cut(s) 109
BspT107I GGYRCC 2 cut(s) 666, 1101
BspTNI GGTCTC 1 cut(s) 10
BsrDI GCAATG 1 cut(s) 1236
BsrI ACTGG 2 cut(s) 247, 983
BssECI CCNNGG 7 cut(s) 119, 341, 359, 751, 1105, 1106, 1254
BssMI GATC 1 cut(s) 114
BssNAI GTATAC 1 cut(s) 1265
BssT1I CCWWGG 1 cut(s) 1254
Bst1107I GTATAC 1 cut(s) 1265
Bst2UI CCWGG 3 cut(s) 752, 952, 1107
Bst4CI ACNGT 4 cut(s) 334, 881, 892, 1317
BstC8I GCNNGC 1 cut(s) 1023
BstDEI CTNAG 5 cut(s) 32, 48, 69, 736, 934
BstDSI CCRYGG 1 cut(s) 119
BstF5I GGATG 2 cut(s) 660, 971
BstFNI CGCG 1 cut(s) 1273
BstH2I RGCGCY 1 cut(s) 1082
BstHHI GCGC 1 cut(s) 1081
BstKTI GATC 1 cut(s) 117
BstMAI GTCTC 2 cut(s) 10, 935
BstMBI GATC 1 cut(s) 114
BstMWI GCNNNNNNNGC 2 cut(s) 79, 309
BstNI CCWGG 3 cut(s) 752, 952, 1107
BstNSI RCATGY 2 cut(s) 202, 592
BstSCI CCNGG 3 cut(s) 750, 950, 1105
BstSFI CTRYAG 1 cut(s) 483
BstSLI GKGCMC 1 cut(s) 879
BstUI CGCG 1 cut(s) 1273
BstV1I GCAGC 3 cut(s) 66, 537, 1158
BstZ17I GTATAC 1 cut(s) 1265
BsuI GTATCC 1 cut(s) 419
BsuRI GGCC 4 cut(s) 246, 561, 1253, 1259
BtgI CCRYGG 1 cut(s) 119
BtsCI GGATG 2 cut(s) 660, 971
BtsIMutI CAGTG 2 cut(s) 40, 330
Cac8I GCNNGC 1 cut(s) 1023
CciI TCATGA 2 cut(s) 496, 1089
CfoI GCGC 1 cut(s) 1081
Cfr13I GGNCC 1 cut(s) 245
CseI GACGC 2 cut(s) 1262, 1269
Csp6I GTAC 4 cut(s) 94, 335, 505, 963
CviAII CATG 6 cut(s) 199, 497, 589, 833, 854, 1090
CviQI GTAC 4 cut(s) 94, 335, 505, 963
DdeI CTNAG 5 cut(s) 32, 48, 69, 736, 934
DpnI GATC 1 cut(s) 116
DpnII GATC 1 cut(s) 114
DrdI GACNNNNNNGTC 1 cut(s) 890
DseDI GACNNNNNNGTC 1 cut(s) 890
Eco130I CCWWGG 1 cut(s) 1254
Eco31I GGTCTC 1 cut(s) 10
Eco57I CTGAAG 1 cut(s) 468
EcoRII CCWGG 3 cut(s) 750, 950, 1105
EcoT14I CCWWGG 1 cut(s) 1254
ErhI CCWWGG 1 cut(s) 1254
Esp3I CGTCTC 1 cut(s) 935
FaeI CATG 6 cut(s) 202, 500, 592, 836, 857, 1093
FaqI GGGAC 3 cut(s) 529, 1108, 1169
FatI CATG 6 cut(s) 198, 496, 588, 832, 853, 1089
FblI GTMKAC 3 cut(s) 195, 327, 1264
Fnu4HI GCNGC 4 cut(s) 80, 551, 1172, 1205
FokI GGATG 2 cut(s) 647, 958
Fsp4HI GCNGC 4 cut(s) 80, 551, 1172, 1205
FspBI CTAG 5 cut(s) 56, 128, 804, 1118, 1238
GlaI GCGC 1 cut(s) 1080
GluI GCNGC 4 cut(s) 80, 551, 1172, 1205
GsaI CCCAGC 1 cut(s) 1129
HaeII RGCGCY 1 cut(s) 1082
HaeIII GGCC 4 cut(s) 246, 561, 1253, 1259
HapII CCGG 2 cut(s) 664, 670
HgaI GACGC 2 cut(s) 1262, 1269
HhaI GCGC 1 cut(s) 1081
Hin1II CATG 6 cut(s) 202, 500, 592, 836, 857, 1093
Hin6I GCGC 1 cut(s) 1079
HinP1I GCGC 1 cut(s) 1079
HincII GTYRAC 3 cut(s) 196, 895, 1362
HindII GTYRAC 3 cut(s) 196, 895, 1362
HindIII AAGCTT 1 cut(s) 759
HpaII CCGG 2 cut(s) 664, 670
Hpy166II GTNNAC 8 cut(s) 196, 328, 459, 538, 877, 895, 1265, 1362
Hpy188I TCNGA 7 cut(s) 51, 595, 636, 647, 916, 937, 944
Hpy188III TCNNGA 5 cut(s) 212, 497, 1090, 1284, 1343
Hpy8I GTNNAC 8 cut(s) 196, 328, 459, 538, 877, 895, 1265, 1362
HpyAV CCTTC 5 cut(s) 472, 525, 770, 1092, 1349
HpyCH4III ACNGT 4 cut(s) 334, 881, 892, 1317
HpyCH4IV ACGT 1 cut(s) 461
HpyF10VI GCNNNNNNNGC 2 cut(s) 79, 309
HpyF3I CTNAG 5 cut(s) 32, 48, 69, 736, 934
HpySE526I ACGT 1 cut(s) 461
Hsp92II CATG 6 cut(s) 202, 500, 592, 836, 857, 1093
HspAI GCGC 1 cut(s) 1079
Kzo9I GATC 1 cut(s) 114
Lsp1109I GCAGC 3 cut(s) 66, 537, 1158
LweI GCATC 1 cut(s) 669
MaeI CTAG 5 cut(s) 56, 128, 804, 1118, 1238
MaeII ACGT 1 cut(s) 461
MaeIII GTNAC 5 cut(s) 212, 439, 881, 1039, 1243
MalI GATC 1 cut(s) 116
MboI GATC 1 cut(s) 114
MboII GAAGA 1 cut(s) 200
MfeI CAATTG 1 cut(s) 870
MhlI GDGCHC 1 cut(s) 879
MluCI AATT 7 cut(s) 62, 220, 373, 402, 813, 870, 1166
MluI ACGCGT 1 cut(s) 1271
MlyI GAGTC 5 cut(s) 590, 816, 920, 1047, 1130
MmeI TCCRAC 2 cut(s) 271, 999
MnlI CCTC 8 cut(s) 57, 351, 369, 515, 699, 737, 916, 1146
MseI TTAA 6 cut(s) 134, 140, 434, 576, 585, 783
MspI CCGG 2 cut(s) 664, 670
MspR9I CCNGG 3 cut(s) 752, 952, 1107
MunI CAATTG 1 cut(s) 870
MvaI CCWGG 3 cut(s) 752, 952, 1107
MvnI CGCG 1 cut(s) 1273
MwoI GCNNNNNNNGC 2 cut(s) 79, 309
NdeII GATC 1 cut(s) 114
NlaIII CATG 6 cut(s) 202, 500, 592, 836, 857, 1093
NlaIV GGNNCC 3 cut(s) 273, 668, 1103
NmeAIII GCCGAG 2 cut(s) 322, 340
NmuCI GTSAC 4 cut(s) 212, 881, 1039, 1243
NspI RCATGY 2 cut(s) 202, 592
PagI TCATGA 2 cut(s) 496, 1089
PasI CCCWGGG 1 cut(s) 1106
PciI ACATGT 2 cut(s) 198, 588
PcsI WCGNNNNNNNCGW 1 cut(s) 1277
PfeI GAWTC 6 cut(s) 43, 52, 124, 968, 1136, 1217
PkrI GCNGC 4 cut(s) 81, 552, 1173, 1206
PleI GAGTC 5 cut(s) 590, 815, 919, 1046, 1129
PpsI GAGTC 5 cut(s) 590, 815, 919, 1046, 1129
PscI ACATGT 2 cut(s) 198, 588
PshBI ATTAAT 1 cut(s) 434
PsiI TTATAA 1 cut(s) 231
Psp6I CCWGG 3 cut(s) 750, 950, 1105
PspFI CCCAGC 1 cut(s) 1125
PspGI CCWGG 3 cut(s) 750, 950, 1105
PspN4I GGNNCC 3 cut(s) 273, 668, 1103
PspPI GGNCC 1 cut(s) 245
PsrI GAACNNNNNNTAC 2 cut(s) 979, 1011
RsaI GTAC 4 cut(s) 95, 336, 506, 964
RsaNI GTAC 4 cut(s) 94, 335, 505, 963
SalI GTCGAC 1 cut(s) 194
SaqAI TTAA 6 cut(s) 134, 140, 434, 576, 585, 783
SatI GCNGC 4 cut(s) 80, 551, 1172, 1205
Sau3AI GATC 1 cut(s) 114
Sau96I GGNCC 1 cut(s) 245
ScaI AGTACT 2 cut(s) 506, 964
SchI GAGTC 5 cut(s) 590, 816, 920, 1047, 1130
ScrFI CCNGG 3 cut(s) 752, 952, 1107
SduI GDGCHC 1 cut(s) 879
SfaNI GCATC 1 cut(s) 669
SfcI CTRYAG 1 cut(s) 483
SmlI CTYRAG 2 cut(s) 74, 908
SmoI CTYRAG 2 cut(s) 74, 908
Sse9I AATT 7 cut(s) 62, 220, 373, 402, 813, 870, 1166
SsiI CCGC 2 cut(s) 467, 1205
SspMI CTAG 5 cut(s) 56, 128, 804, 1118, 1238
StyD4I CCNGG 3 cut(s) 750, 950, 1105
StyI CCWWGG 1 cut(s) 1254
TaaI ACNGT 4 cut(s) 334, 881, 892, 1317
TaiI ACGT 1 cut(s) 464
TaqI TCGA 4 cut(s) 84, 195, 921, 1083
TasI AATT 7 cut(s) 62, 220, 373, 402, 813, 870, 1166
TatI WGTACW 2 cut(s) 504, 962
TauI GCSGC 1 cut(s) 1207
TfiI GAWTC 6 cut(s) 43, 52, 124, 968, 1136, 1217
Tru1I TTAA 6 cut(s) 134, 140, 434, 576, 585, 783
Tru9I TTAA 6 cut(s) 134, 140, 434, 576, 585, 783
TscAI CASTG 2 cut(s) 40, 337
TseFI GTSAC 4 cut(s) 212, 881, 1039, 1243
TseI GCWGC 3 cut(s) 79, 550, 1171
Tsp45I GTSAC 4 cut(s) 212, 881, 1039, 1243
TspDTI ATGAA 8 cut(s) 42, 485, 654, 744, 801, 960, 987, 1230
TspGWI ACGGA 2 cut(s) 136, 1058
TspRI CASTG 2 cut(s) 40, 337
VneI GTGCAC 1 cut(s) 875
VspI ATTAAT 1 cut(s) 434
XapI RAATTY 1 cut(s) 373
XceI RCATGY 2 cut(s) 202, 592
XmiI GTMKAC 3 cut(s) 195, 327, 1264
XspI CTAG 5 cut(s) 56, 128, 804, 1118, 1238
ZrmI AGTACT 2 cut(s) 506, 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.