RchiOBHm_Chr7g0213751

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
30883458 .. 30885546
2089 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19128

Sequence Viewer

Length: 1974 bp
ATGAAGTTGACTGTACTGGAGTTGGATACTAACCAACTTTTCGGTTCTTTACCCCAAAATATTTGTCGAGGTGGATCACTAGAATACTTTACAGCAAACAACAACAATTTGACAGGACCTATCCCCAAAAGCTTGAAAACTTGCAGCAGCTTAGTCAGACTCCGTCTGGGATGGAACCAACTCACAGGCAATATCTCTGAAGACTTTGGTGTCTATCCTCATCTTCAATTTATAGACCTAAGCCACAATAACTTCTATGGCGAAGTCTCACACACTTGGGGACAATGTCCACATTTAGCAACCCTACGAATTGCTGGAAACAAACTTACTGGTAGCATACCACCTGAGATAAGCAATGCAGCCCAAATTCATGAACTAGATCTTTCATCAAACCGTTTAGTTAGCATGATCCCAGAGGAATTGAGGAGAATGACTTCTTTGTTGAAGCTGGTGTTGAATGACAATCAAATTTGGGGTCATATACCCTCAGCATTTGGATCCTTGAATAATCTTGAATACCTTGACCTGTCCATGAACAAATTTAGCGAGTCAATTCCAAGCACTTTAGGTGACTTGTCCAAGTTAAACTACTTGAATTTGAGCAACAACAAGTTGAGTCAGGAAATTCCGTTTCAGTTGGGGAAGTTAGTTCATCTGTCCCTACTGGATTTGAGTTATAACTCACTTGAGAATAAGATACCATCAGAAATGAGCAATATGCAAAGCCTGGAGACACTGAATCTTTCACATAATAAACTTTCTGGTCTCATTCCAACATCTTTCGATGAAATGCCTGGCTTGCTGTACATCGACATATCCTACAATCAGTTGCAGGGTCCCTTTCCAAACAACAAAGCATTTCAAGATGCTACCTTGGATGGGAATAAGGGATTGTGTAGTGATGTTGTTAGAAGATTTCAACCCTGTAAGAATGTCACTAAATTCAATCGAGAATCTGTATTCATAATCATTTTTGTTTCCTTGGGAGCTCTTTCACTTGCTGTCCTTGGAATTGTAACGATTGTTAGATCAATAAAGAAGAAAGAGCAGCAACCAAAGCAGCATGATATGCAGGATGGAGGGACTTTTTCCGTACTTAACTTCGATGGAAAAATGATGTATGAAGAAATCATAAAAGCAACCAATGGTTTTGACTCCATGTACTGCATTGGTAAGGGAGCATCTGGAAGCGTCTACAAGGCAAAGCTGTCCTCAGCCATCATAGTTGCGGTGAAGAAACTCCAACATGTACTAGATGGCGATGGTGAGGAGATGTCGGCGAAGGAATTCCTCAATGAAATGAGATCACTAGTAGAGATACGACACCGAAACATTGTGAAACTTCTTGTTTTTTGTTCAAAACCAAGTCACTTGTTTTTGGTCAAAGAATCTGAAGCTAAAAAATTGGAGTGGACTTCAAGGATAAGAGTTGTAAAAGGTGTGGCTCATGCATTGTCTTATATGCATCATGATTGCAACCCACTGATTGTACATCGAGACATATCAATCAACAATATTTTGCTCGATGACGAATATGAGCCTTATGTGTCAGACTTTGGCACTGCTAAGTTGTTGTATCCAGACTCATCTAATTGGACTGCTCGTGCGAGCACATATGGATACATAGCTCCAGAGCTTGCTTACACAATGAAGGCAACTGAGAAATGTGATGTTTATAGTTTTGGAGTGCTGGCACTAGAAGTGATAATGGGAAAGCCGCTGGGTGATTTCATCTCTTCATTTTTACATCTATCCGTCAATGCAAACATATTGCTTACGGAAATTTTGGACCAACGCCTACCGCCTCCTACACCTCAAGTTGAAGATGATCTGATAACCATTGCAGGGCTAGCAAATGCATGCACACAGTCCAATCCACAATCTAGGCCAACAATATGCAGAAGGTGTGTCAGGTCTTATCATCCCAAAATGCATATTCCTATCGACAACAAGACATTGCACTCGAACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

657

Amino Acids

73.38

Weight (kDa)

6.71

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 92 - 206 7.8e-08 Leucine-rich repeat region
LRR_8 PF13855 97 - 157 9.6e-06 Leucine rich repeat
LRR_8 PF13855 146 - 205 2.5e-09 Leucine rich repeat
LRR_8 PF13855 218 - 277 3.6e-10 Leucine rich repeat
Pkinase PF00069 389 - 635 2e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 390 - 632 6.4e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AasI GACNNNNNNGTC 1 cut(s) 209
AccI GTMKAC 1 cut(s) 1194
AciI CCGC 3 cut(s) 1229, 1718, 1802
AclWI GGATC 4 cut(s) 82, 403, 492, 505
AcsI RAATTY 8 cut(s) 366, 468, 539, 595, 624, 941, 1286, 1782
AcuI CTGAAG 2 cut(s) 219, 1413
AfaI GTAC 6 cut(s) 15, 806, 1095, 1163, 1251, 1491
AfiI CCNNNNNNNGG 2 cut(s) 879, 1845
AflIII ACRYGT 1 cut(s) 1246
AhlI ACTAGT 1 cut(s) 1309
AjnI CCWGG 2 cut(s) 726, 793
AluBI AGCT 8 cut(s) 132, 150, 448, 989, 1207, 1397, 1628, 1636
AluI AGCT 8 cut(s) 132, 150, 448, 989, 1207, 1397, 1628, 1636
Alw21I GWGCWC 2 cut(s) 991, 1613
Alw26I GTCTC 4 cut(s) 271, 725, 770, 1491
AlwI GGATC 4 cut(s) 82, 403, 492, 505
AoxI GGCC 1 cut(s) 1886
ApeKI GCWGC 5 cut(s) 144, 147, 359, 1048, 1060
ApoI RAATTY 8 cut(s) 366, 468, 539, 595, 624, 941, 1286, 1782
ArsI GACNNNNNNTTYG 4 cut(s) 49, 81, 460, 492
Asp700I GAANNNNTTC 2 cut(s) 433, 1286
AspS9I GGNCC 3 cut(s) 116, 836, 1789
AsuHPI GGTGA 4 cut(s) 581, 1243, 1277, 1736
AsuNHI GCTAGC 1 cut(s) 1849
AvaII GGWCC 3 cut(s) 116, 836, 1789
BamHI GGATCC 1 cut(s) 497
BanII GRGCYC 1 cut(s) 991
BauI CACGAG 1 cut(s) 1602
BbsI GAAGAC 1 cut(s) 207
Bbv12I GWGCWC 2 cut(s) 991, 1613
BbvCI CCTCAGC 2 cut(s) 487, 1213
BbvI GCAGC 5 cut(s) 156, 159, 371, 1060, 1072
BccI CCATC 8 cut(s) 165, 709, 872, 1070, 1100, 1226, 1250, 1256
BciT130I CCWGG 2 cut(s) 728, 795
BciVI GTATCC 3 cut(s) 19, 1587, 1613
BcoDI GTCTC 4 cut(s) 271, 725, 770, 1491
BcuI ACTAGT 1 cut(s) 1309
BfaI CTAG 8 cut(s) 80, 377, 1253, 1310, 1697, 1850, 1884, 1972
BfuI GTATCC 3 cut(s) 19, 1587, 1613
BglII AGATCT 1 cut(s) 379
BisI GCNGC 6 cut(s) 145, 148, 360, 1049, 1061, 1718
BlsI GCNGC 6 cut(s) 146, 149, 361, 1050, 1062, 1719
Bme1390I CCNGG 2 cut(s) 728, 795
Bme18I GGWCC 3 cut(s) 116, 836, 1789
BmgT120I GGNCC 3 cut(s) 116, 836, 1789
BmiI GGNNCC 4 cut(s) 176, 499, 837, 838
BmrFI CCNGG 2 cut(s) 728, 795
BmsI GCATC 3 cut(s) 856, 1190, 1474
BmtI GCTAGC 1 cut(s) 1853
BpiI GAAGAC 1 cut(s) 207
BpmI CTGGAG 3 cut(s) 38, 749, 1614
Bpu10I CCTNAGC 3 cut(s) 239, 487, 1213
BpuEI CTTGAG 2 cut(s) 707, 1800
BsaI GGTCTC 1 cut(s) 770
BsaJI CCNNGG 3 cut(s) 873, 981, 1006
Bsc4I CCNNNNNNNGG 2 cut(s) 879, 1845
Bse1I ACTGG 3 cut(s) 21, 334, 669
Bse3DI GCAATG 3 cut(s) 361, 1839, 1955
BseBI CCWGG 2 cut(s) 728, 795
BseDI CCNNGG 3 cut(s) 873, 981, 1006
BseGI GGATG 4 cut(s) 176, 883, 1081, 1921
BseLI CCNNNNNNNGG 2 cut(s) 879, 1845
BseMI GCAATG 3 cut(s) 361, 1839, 1955
BseMII CTCAG 4 cut(s) 336, 501, 1227, 1650
BseNI ACTGG 3 cut(s) 21, 334, 669
BseRI GAGGAG 2 cut(s) 439, 1283
BseXI GCAGC 5 cut(s) 156, 159, 371, 1060, 1072
BseYI CCCAGC 1 cut(s) 1720
BshFI GGCC 1 cut(s) 1888
BsiHKAI GWGCWC 2 cut(s) 991, 1613
BslFI GGGAC 4 cut(s) 294, 643, 822, 1096
BslI CCNNNNNNNGG 2 cut(s) 879, 1845
BsmAI GTCTC 4 cut(s) 271, 725, 770, 1491
BsmFI GGGAC 4 cut(s) 294, 643, 822, 1096
BsnI GGCC 1 cut(s) 1888
Bso31I GGTCTC 1 cut(s) 770
Bsp1286I GDGCHC 2 cut(s) 991, 1613
Bsp1407I TGTACA 2 cut(s) 804, 1489
Bsp143I GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
BspACI CCGC 3 cut(s) 1229, 1718, 1802
BspANI GGCC 1 cut(s) 1888
BspCNI CTCAG 4 cut(s) 337, 500, 1226, 1651
BspHI TCATGA 2 cut(s) 370, 1468
BspLI GGNNCC 4 cut(s) 176, 499, 837, 838
BspOI GCTAGC 1 cut(s) 1853
BspPI GGATC 4 cut(s) 82, 403, 492, 505
BspTNI GGTCTC 1 cut(s) 770
BsrDI GCAATG 3 cut(s) 361, 1839, 1955
BsrGI TGTACA 2 cut(s) 804, 1489
BsrI ACTGG 3 cut(s) 21, 334, 669
BssECI CCNNGG 3 cut(s) 873, 981, 1006
BssMI GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
BssSI CACGAG 1 cut(s) 1602
BssT1I CCWWGG 3 cut(s) 873, 981, 1006
Bst2BI CACGAG 1 cut(s) 1602
Bst2UI CCWGG 2 cut(s) 728, 795
Bst4CI ACNGT 3 cut(s) 13, 395, 1869
Bst6I CTCTTC 1 cut(s) 1741
BstAPI GCANNNNNTGC 1 cut(s) 1069
BstAUI TGTACA 2 cut(s) 804, 1489
BstC8I GCNNGC 6 cut(s) 800, 1609, 1638, 1692, 1851, 1861
BstDEI CTNAG 7 cut(s) 151, 239, 345, 487, 1213, 1566, 1659
BstF5I GGATG 4 cut(s) 176, 883, 1081, 1921
BstKTI GATC 7 cut(s) 77, 382, 411, 500, 1031, 1307, 1831
BstMAI GTCTC 4 cut(s) 271, 725, 770, 1491
BstMBI GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
BstMWI GCNNNNNNNGC 4 cut(s) 799, 1057, 1069, 1850
BstNI CCWGG 2 cut(s) 728, 795
BstNSI RCATGY 2 cut(s) 1250, 1863
BstSCI CCNGG 2 cut(s) 726, 793
BstV1I GCAGC 5 cut(s) 156, 159, 371, 1060, 1072
BstV2I GAAGAC 1 cut(s) 207
BstX2I RGATCY 2 cut(s) 379, 497
BstYI RGATCY 2 cut(s) 379, 497
BsuI GTATCC 3 cut(s) 19, 1587, 1613
BsuRI GGCC 1 cut(s) 1888
BtgZI GCGATG 1 cut(s) 1275
BtsCI GGATG 4 cut(s) 176, 883, 1081, 1921
BtsI GCAGTG 1 cut(s) 1560
BtsIMutI CAGTG 3 cut(s) 734, 1481, 1560
Cac8I GCNNGC 6 cut(s) 800, 1609, 1638, 1692, 1851, 1861
CciI TCATGA 2 cut(s) 370, 1468
Cfr13I GGNCC 3 cut(s) 116, 836, 1789
CseI GACGC 1 cut(s) 1180
Csp6I GTAC 6 cut(s) 14, 805, 1094, 1162, 1250, 1490
CviAII CATG 9 cut(s) 371, 406, 532, 1064, 1159, 1247, 1448, 1469, 1860
CviQI GTAC 6 cut(s) 14, 805, 1094, 1162, 1250, 1490
DdeI CTNAG 7 cut(s) 151, 239, 345, 487, 1213, 1566, 1659
DpnI GATC 7 cut(s) 76, 381, 410, 499, 1030, 1306, 1830
DpnII GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
Eam1104I CTCTTC 1 cut(s) 1741
EarI CTCTTC 1 cut(s) 1741
Ecl136II GAGCTC 1 cut(s) 989
Eco130I CCWWGG 3 cut(s) 873, 981, 1006
Eco24I GRGCYC 1 cut(s) 991
Eco31I GGTCTC 1 cut(s) 770
Eco47I GGWCC 3 cut(s) 116, 836, 1789
Eco53kI GAGCTC 1 cut(s) 989
Eco57I CTGAAG 2 cut(s) 219, 1413
EcoICRI GAGCTC 1 cut(s) 989
EcoO109I RGGNCCY 2 cut(s) 116, 836
EcoRI GAATTC 1 cut(s) 1286
EcoRII CCWGG 2 cut(s) 726, 793
EcoT14I CCWWGG 3 cut(s) 873, 981, 1006
EcoT22I ATGCAT 4 cut(s) 1453, 1467, 1861, 1935
EcoT38I GRGCYC 1 cut(s) 991
ErhI CCWWGG 3 cut(s) 873, 981, 1006
FaeI CATG 9 cut(s) 374, 409, 535, 1067, 1162, 1250, 1451, 1472, 1863
FaqI GGGAC 4 cut(s) 294, 643, 822, 1096
FatI CATG 9 cut(s) 370, 405, 531, 1063, 1158, 1246, 1447, 1468, 1859
FauNDI CATATG 1 cut(s) 1615
FblI GTMKAC 1 cut(s) 1194
Fnu4HI GCNGC 6 cut(s) 145, 148, 360, 1049, 1061, 1718
FokI GGATG 4 cut(s) 183, 890, 1088, 1908
FriOI GRGCYC 1 cut(s) 991
Fsp4HI GCNGC 6 cut(s) 145, 148, 360, 1049, 1061, 1718
FspBI CTAG 8 cut(s) 80, 377, 1253, 1310, 1697, 1850, 1884, 1972
GluI GCNGC 6 cut(s) 145, 148, 360, 1049, 1061, 1718
GsaI CCCAGC 1 cut(s) 1724
GsuI CTGGAG 3 cut(s) 38, 749, 1614
HaeIII GGCC 1 cut(s) 1888
HgaI GACGC 1 cut(s) 1180
Hin1II CATG 9 cut(s) 374, 409, 535, 1067, 1162, 1250, 1451, 1472, 1863
HincII GTYRAC 1 cut(s) 9
HindII GTYRAC 1 cut(s) 9
HindIII AAGCTT 1 cut(s) 130
HinfI GANTC 8 cut(s) 159, 548, 616, 739, 953, 1154, 1388, 1583
HphI GGTGA 4 cut(s) 581, 1243, 1277, 1736
Hpy166II GTNNAC 4 cut(s) 9, 290, 1195, 1413
Hpy188I TCNGA 6 cut(s) 158, 199, 706, 1393, 1552, 1833
Hpy8I GTNNAC 4 cut(s) 9, 290, 1195, 1413
HpyAV CCTTC 3 cut(s) 1276, 1645, 1896
HpyCH4III ACNGT 3 cut(s) 13, 395, 1869
HpyF10VI GCNNNNNNNGC 4 cut(s) 799, 1057, 1069, 1850
HpyF3I CTNAG 7 cut(s) 151, 239, 345, 487, 1213, 1566, 1659
Hsp92II CATG 9 cut(s) 374, 409, 535, 1067, 1162, 1250, 1451, 1472, 1863
KflI GGGWCCC 1 cut(s) 836
Kzo9I GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
LmnI GCTCC 3 cut(s) 986, 1178, 1633
Lsp1109I GCAGC 5 cut(s) 156, 159, 371, 1060, 1072
LweI GCATC 3 cut(s) 856, 1190, 1474
MaeI CTAG 8 cut(s) 80, 377, 1253, 1310, 1697, 1850, 1884, 1972
MaeIII GTNAC 4 cut(s) 569, 934, 1015, 1367
MalI GATC 7 cut(s) 76, 381, 410, 499, 1030, 1306, 1830
MboI GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
MboII GAAGA 8 cut(s) 212, 215, 924, 1051, 1136, 1246, 1728, 1835
MflI RGATCY 2 cut(s) 379, 497
MhlI GDGCHC 2 cut(s) 991, 1613
MlyI GAGTC 5 cut(s) 153, 557, 625, 1148, 1577
MmeI TCCRAC 2 cut(s) 797, 1267
Mph1103I ATGCAT 4 cut(s) 1453, 1467, 1861, 1935
MroXI GAANNNNTTC 2 cut(s) 433, 1286
MseI TTAA 2 cut(s) 584, 1098
MspA1I CMGCKG 1 cut(s) 1720
MspR9I CCNGG 2 cut(s) 728, 795
MvaI CCWGG 2 cut(s) 728, 795
MwoI GCNNNNNNNGC 4 cut(s) 799, 1057, 1069, 1850
NdeI CATATG 1 cut(s) 1615
NdeII GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
NheI GCTAGC 1 cut(s) 1849
NlaIII CATG 9 cut(s) 374, 409, 535, 1067, 1162, 1250, 1451, 1472, 1863
NlaIV GGNNCC 4 cut(s) 176, 499, 837, 838
NmuCI GTSAC 3 cut(s) 569, 934, 1367
NsiI ATGCAT 4 cut(s) 1453, 1467, 1861, 1935
NspI RCATGY 2 cut(s) 1250, 1863
PaeI GCATGC 1 cut(s) 1863
PagI TCATGA 2 cut(s) 370, 1468
PciI ACATGT 1 cut(s) 1246
PdmI GAANNNNTTC 2 cut(s) 433, 1286
PfeI GAWTC 3 cut(s) 739, 953, 1388
PflFI GACNNNGTC 2 cut(s) 162, 285
PkrI GCNGC 6 cut(s) 146, 149, 361, 1050, 1062, 1719
PleI GAGTC 5 cut(s) 153, 556, 624, 1148, 1577
PpsI GAGTC 5 cut(s) 153, 556, 624, 1148, 1577
PpuMI RGGWCCY 2 cut(s) 116, 836
PscI ACATGT 1 cut(s) 1246
PsiI TTATAA 1 cut(s) 678
Psp124BI GAGCTC 1 cut(s) 991
Psp5II RGGWCCY 2 cut(s) 116, 836
Psp6I CCWGG 2 cut(s) 726, 793
PspFI CCCAGC 1 cut(s) 1720
PspGI CCWGG 2 cut(s) 726, 793
PspN4I GGNNCC 4 cut(s) 176, 499, 837, 838
PspPI GGNCC 3 cut(s) 116, 836, 1789
PspPPI RGGWCCY 2 cut(s) 116, 836
PsuI RGATCY 2 cut(s) 379, 497
PsyI GACNNNGTC 2 cut(s) 162, 285
RsaI GTAC 6 cut(s) 15, 806, 1095, 1163, 1251, 1491
RsaNI GTAC 6 cut(s) 14, 805, 1094, 1162, 1250, 1490
SacI GAGCTC 1 cut(s) 991
SaqAI TTAA 2 cut(s) 584, 1098
SatI GCNGC 6 cut(s) 145, 148, 360, 1049, 1061, 1718
Sau3AI GATC 7 cut(s) 74, 379, 408, 497, 1028, 1304, 1828
Sau96I GGNCC 3 cut(s) 116, 836, 1789
SchI GAGTC 5 cut(s) 153, 557, 625, 1148, 1577
ScrFI CCNGG 2 cut(s) 728, 795
SduI GDGCHC 2 cut(s) 991, 1613
SfaNI GCATC 3 cut(s) 856, 1190, 1474
SinI GGWCC 3 cut(s) 116, 836, 1789
SmlI CTYRAG 2 cut(s) 686, 1815
SmoI CTYRAG 2 cut(s) 686, 1815
SpeI ACTAGT 1 cut(s) 1309
SphI GCATGC 1 cut(s) 1863
SsiI CCGC 3 cut(s) 1229, 1718, 1802
SspI AATATT 2 cut(s) 61, 1516
SspMI CTAG 8 cut(s) 80, 377, 1253, 1310, 1697, 1850, 1884, 1972
SstI GAGCTC 1 cut(s) 991
StyD4I CCNGG 2 cut(s) 726, 793
StyI CCWWGG 3 cut(s) 873, 981, 1006
TaaI ACNGT 3 cut(s) 13, 395, 1869
TaqI TCGA 9 cut(s) 67, 783, 810, 949, 1104, 1495, 1524, 1944, 1964
TatI WGTACW 5 cut(s) 13, 804, 1161, 1249, 1489
TauI GCSGC 1 cut(s) 1720
TfiI GAWTC 3 cut(s) 739, 953, 1388
Tru1I TTAA 2 cut(s) 584, 1098
Tru9I TTAA 2 cut(s) 584, 1098
TscAI CASTG 3 cut(s) 741, 1488, 1567
TseFI GTSAC 3 cut(s) 569, 934, 1367
TseI GCWGC 5 cut(s) 144, 147, 359, 1048, 1060
Tsp45I GTSAC 3 cut(s) 569, 934, 1367
TspGWI ACGGA 5 cut(s) 152, 618, 1081, 1744, 1793
TspRI CASTG 3 cut(s) 741, 1488, 1567
Tth111I GACNNNGTC 2 cut(s) 162, 285
VpaK11BI GGWCC 3 cut(s) 116, 836, 1789
XapI RAATTY 8 cut(s) 366, 468, 539, 595, 624, 941, 1286, 1782
XceI RCATGY 2 cut(s) 1250, 1863
XmiI GTMKAC 1 cut(s) 1194
XmnI GAANNNNTTC 2 cut(s) 433, 1286
XspI CTAG 8 cut(s) 80, 377, 1253, 1310, 1697, 1850, 1884, 1972
Zsp2I ATGCAT 4 cut(s) 1453, 1467, 1861, 1935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.