RLG00000000779

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
5294332 .. 5300627
6296 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000779

Sequence Viewer

Length: 5097 bp
ATGTTGATGATTCTGGTGAGGTGTTATACCATTACAAGCAACATGGGAGCATCAATCTTTGAGAAACTAGGCTCTCTGTCTTTCCTCATCATGTTTGTTGTTTTGGTTTCGTCTTTCAAATGTGTTGCTTCAGCTACTGTTTCTACTGATGAAGTTGGTGCTCTTCTCCAATGGAAATCCAGTCTTCAAGATACTCAATCACACCTAACTTCATGGAGTGCTCAGCACTTCCCAAATGAAACAAGTCCATGCACTTGGTTTGCCATTTCTTGCAACACTGCTAAGAGTGTCACCGCAATAAACCTTACCAAGTCGGGTTTGCAAGGTACGCTTCACGAATTTTCATTCTCCTCCTTCCCGAATCTTGAGCACTTTGATCTCAGCATGAACTCAATCTTTGGTACCATTCCAACTGAAATCTGTCGGCTCTCCAAATTAGTGTATCTTGATTTGTCCGGTAATAAGTTAAATGGTTCAGTTCCTGCTTCTTTTGGAAACCTTAGTAGTCTTGCTTACTTGAATATAGGTAGGAACTTTCTTGCTAGTTCAGTTCCTTTAGAAATGGGGAATCTTACTCGGTTGGTGGAGCTTTACTTGAATACCAACAATCTTACAGGTCAGATCCCACAAACTTTTGGGAACTTAAGAAAGCTAAAAGTACTATACATGTTTGAGAACATATTTGTTGGTTCCATTCCCCTGGAGATAGGAAAGTTGGCATCTCTCAGCAATCTAAGCCTTCACACCAACAACTTTTCTGGCAGTATTCCAGATTCCATATGTGACCTGAGACACCTTACTTTACTGGAACTGTATCGGAACAATCTGTCAGGCCCAATTCCGGAAAATATTGGAAGCTTGAAGTCTCTTGTTGTTCTAAATGTATGTGAGAATCAACTCAGTGGTCCTATTCCCATGTCAATTGGTAACATGAGCAAGTTACAGGTTCTATATATCCGCGACAACAAACTCTCTGGTTCCATTCCTCAAGTGATAGGAGATCTTATGAACTTGGCTGTCCTGAGAGTTGCCAGAAACAATTTGACTGGTCATTTACCACAGAATCTCTGCAAAGGTGGAGCGCTTGCAAACTTTACAGCTAATGGAAATCATCTCATAGGTCAAATGCCTAAAAGCTTGAGAAACTGCACAACTTTATATAGAGTCCGTCTTGATGGGAACCAATTCACTGGAAATATATCTGAAGATTTTGGTGAATATCCAAACTTGGATTACATAAATCTAAGTGACAATAATTTTTATGGTGAACTTTCGGAGAAATGGGGAAAGTCTCTGCTGCTAACGGATCTTGAGATTGCAGGTAACAATATAACAGGTTCCATACCACCTGAGATTGGTAATTTGACTCGGCTACATTTGCTTAATCTTTCTTCAAATCATTTAGTTGGGACAATCCCTATGGGACTAGGAAAGTTGACCTCTTTGGTGAGGCTTGTACTGAATGGCAATCAACTTTCTGGTGCTATACCTCAAGAAATTGGATCACTGACTGACCTTGAATTTCTTGACCTGTCCAAAAACAACTTGAGCCAGTCGATTCCGAGTAGTCTGGGGAACCTTGCGAAAGTGCACCACCTGAACTTGAGCAACAACAAGTTGAGCCATGGAACCCCAAGTAAGTTGGGTCAGTTGAAGCAGCTGTCTGTGCTAGATTTGAGTCATAATTTTCTTAGTGAAGAGATACCAACGGAGTTCTGTAATCTGGAAAGCTTGTTGACACTGAATCTGTCCCACAATAACCTTTCTGGTATTGTTCCCCAGACTTTTGCTGACCTTCGTGGCTTGGAGTTCGTTGACATATCATACAATCAATTATGGGGTCCGATTCCAGAAAACGAAGCATTTCAAGAAGCTCCTATAGAAGCATTGCAAGGGAATCAAGGTCTGTGTGGCAATGCTACAGGTCTACAGCCCTGCACCAAGACTCCTGGCAAAAAGAAGCACAGTTCGAACATTGGTTACAAAGTCATGTGCTTGGTAATCCCACCTGTGGTAGGAATACTTATACTTCTTTTCTGTGGAATTTGTATCACATACAGAAGAAAAAAGAATTTTCAAAAAACAGATGAAGAGAACATGCATCCTAAAGAATTTGAACTTCGTTCAGTGTCGATTTTTGAAGGAAAATTGTTGTATGAAGAAATTGTAAAAGCAACTGAGGATTTTGCTGATGCTTATTGCATTGGGAAGGGAGGCACTGGAAGCGTTTACAAGGCAAAGCTTCCATCTGATGACTTGGTTGCCGTAAAGAAACTCCATAGTACTCAATGTGATGGTGATAGGAGCTTCGAAAAAGAGTTCTTAAACGAGGTGATGGCATTGACTGAGATACGCCACAGAAACATAGTGAAATTTTATGGCTTCTGTTTACATTCACGACACTCATTTTTGGTTTATGAGTACCTCGAAAAGGGCAGCTTGTTCTCAATCTTGTGCAATGAAGAAGCAGCCAAGGAATTGGATTGGAGCAAGAGGGTGAATATCATCAAAGGTGTGGCTCATGGCTTATCATACATGCACTCTTATGTATCGCCACCAATTGTTCATCGAGACATAACCAGCAAGAACATTTTGCTAGATGCCGAATATGAGGCTTGCATTTCGGACTTTGGCACTGCTAAGCTGCTAGAACTCGGTGCATCTAACTGGACTGCTGTTGCAGGCACATTCGGATATGTAGCACCAGAGCTTGCATATACATTGAAGGTGACTGAGAAATGTGATGTGTACAGCTTCGGAGTATTGGCACTCGAAGTGATGAATGGGAAGTACCCGAGCGATCTAATCAGGTCTTTGTTGTCACCAGCTGCAATCAGAGAAGGAAATTTGCCTGAAGATGTGTGGGATGACCGCCTTGAACCTCCCAGGGGTAAAATTCTGGAAGAACTTGTTACTGTTTTAATGCTAGCAGTCGCATGCTTACATCCAAATCCACAGTTTAGGCCTACCATTCCACCTGCTTCCGATTTCAATCTTGATACAAGCAGCGCCTCAGAAGAATATAATGGCATTACAAATGAAGCACAGAGGCCACAATATACCAAAACAAAAGCCATGAGAACTTCAGCAGCTTATGATAAGACTTACCTTCCCATTGCGACCAATTCTTCCAGAGATCAAAAGGCAAATGCATGCCCGTGTTTTTGGACCGGTATTTCATGCAATGCTGCTGGAGGTATCAGCAGAATAAACCTTACCAATTCTGGTATACAAGGTACACTACATGAATTTTCATTCTCGTCCTTCCCAAATCTAGAACATATTGACCTCAGCATAAATAAGCTATTTGGTGTCATTCCCCTACAAATCAGTTCTCTCTCCAAATTCATGTATCTTGATCTCTCCAATAATCAGTTGTCCGGGAAAATCCCACAAGAAATTGGTTTCCTCATAAGCCTTCACACCCTACAGCTCAATAAAAACCAGTTGAATGGCTCAATTCCTCAAGAAATAGGTCAGCTTAAGTCTCTTCTTGTTCTTAGTCTCATAGAAAATCGCCTCACTGGTCCTCTTCCCTTGTCAATTGGAAATCTGAGCAAGTTACAGGTTCTATACATTCACGACAACCAACTCTCTGGCTCCATTCCTCAAGTGATAGGGAATCTCAAGAATCTGGTTGTGCTAAGAGTTGCCAGAAACAATTTGACTGGTCATTTGCCTCTGAATCTCTGCCAAGGAGGGCATCTTACTAATTTCACTGCAAATAGCAATCGTCTGATAGGTAAAATTCCCAAAAGCCTGAAAAACTGCACAACCTTATATAGAGTCTGCCTTGATAGAAACCAACTCACTGGAAACATATCTGAAGATTTTGGTGAGTACCCAAACTTGGATTACATAAATCTGAGCAACAATAGATTTTACGGAGAACTTTCACCAAAATGGGGTAGGTCTCTGAAGCTAACAAATCTTGAGATTGCAGGCAACAATGTTACTGGTGCCATTCCACCTGAGATTGGAAACTTGACTCAACTGCAGTTGCTTAATCTTTCTTCAAATAATTTTGAGCTTGGATCACTGACTGAACTTGAGTATCTTGACCTGTCCACAAACAAATTGAGCCAGTCAATTCCAAGTAGCCTAGGTAACATTCTCAAGCTGCACCATATCAATGCCAGCAACAACAAGTTAAGCCAAAGAATTCCATTTCAATTCAGGAGTTTAACTCAGCTATCCGTGCTAGATTTGAGTCACAATGGTCTTGATCGAGAGTTACCAACAGAGCTTAGTAAGTTGGAAAGTTTGGTGACACTAAATCTTTCCCACAATAATCTCTCTGGAGTTATTCCAAAGAGTTTTGATGAACTTCGTGGCTTGGAGCACATCGACATATCATATAATCAATTCTGGGGTCCCATCCCAAACAATAAGGCATTTCATGAGGCTCCCATTAAAGCATTGCAGGGAAACAAAGGGTTGTGTGGAAATGTTACAGGTTTTCTGCCCTGCATTAATAATCCGGAAGATAAGAAGCACAGTTCGAAAACTGGTGTAAAAGTTGTGTGCTTACTCATCCTGGCTGTCCTGGGTGCAGTTATATTTGCTTGGTTCATGGTATTAAGGAAAAAGACATGTCAACACACAAGGCAAAAAGACATGTACCTACAACAGTTTGAGTTGCGTTCCGTATCACTTTTTGATATCAGATTATTGTATGAAGAAATTGTAAAAGCAACTGAGAATTTTGATGCTGCTTATTTTCTAGGCAAGGGAGGGTTTGGAAGCGTTTACAAAGCAAAGCTTCCATCAGAAGAAGTGGTTGCTGTAAAGAAGTGGAACTCTCTATTGGTTTATGAGTACCTTGAAACAGGTAGCTTGTTTTCAATCTTGTGCAATGAAGAAGAAGCTAAGAAATTGGATTGGAGTAAAAGAGTGAATATCATTAAAGGTGTGGCCCATGGCTTATCCTACATGCACAATGATGTGTCCCCGCCAATTGTTCATCGAGACATATCCAGCAAGAACATTTTGCTAGATGCCGACTATGAGGCTCGCATCTCAGACTTTGGCACTGCTAAGCTTCTAAAGCATGACTCACTAACTGGACTGCCGTTGCAGGCACAATTGGATACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1699

Amino Acids

187.5

Weight (kDa)

6.76

Isoelectric Point (pI)

34.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 92 2.7e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 97 - 156 4.9e-07 Leucine rich repeat
LRR_14 PF23598 125 - 223 4.4e-10 Leucine-rich repeat region
LRR_14 PF23598 213 - 296 3.8e-08 Leucine-rich repeat region
LRR_14 PF23598 379 - 540 2.1e-12 Leucine-rich repeat region
LRR_14 PF23598 494 - 586 6.6e-09 Leucine-rich repeat region
LRR_8 PF13855 506 - 562 8.2e-06 Leucine rich repeat
LRR_8 PF13855 553 - 612 5.7e-11 Leucine rich repeat
Pkinase PF00069 734 - 992 5.3e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 735 - 990 5.3e-39 Protein tyrosine and serine/threonine kinase
LRR_14 PF23598 1084 - 1217 2.3e-13 Leucine-rich repeat region
LRR_8 PF13855 1397 - 1456 6.3e-10 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 1596 - 1686 4.3e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 1601 - 1686 7.8e-14 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2986
Acc36I ACCTGC 2 cut(s) 1310, 2986
Acc65I GGTACC 1 cut(s) 401
AccB1I GGYRCC 2 cut(s) 401, 3959
AccI GTMKAC 2 cut(s) 1927, 3229
AccII CGCG 1 cut(s) 960
AccIII TCCGGA 2 cut(s) 841, 4480
AciI CCGC 4 cut(s) 294, 958, 2872, 4952
AclWI GGATC 4 cut(s) 616, 1314, 1510, 4042
AcuI CTGAAG 6 cut(s) 114, 1224, 2874, 3069, 3846, 3938
AfeI AGCGCT 1 cut(s) 1083
AfiI CCNNNNNNNGG 9 cut(s) 841, 1355, 2011, 2015, 2431, 2888, 3850, 3905, 3977
AflII CTTAAG 2 cut(s) 643, 3482
AflIII ACRYGT 3 cut(s) 666, 4592, 4617
AgeI ACCGGT 1 cut(s) 3170
AjnI CCWGG 5 cut(s) 699, 1948, 2885, 4536, 4545
AjuI GAANNNNNNNTTGG 2 cut(s) 4790, 4822
Alw21I GWGCWC 5 cut(s) 163, 223, 372, 1593, 4344
Alw26I GTCTC 8 cut(s) 784, 870, 1296, 2565, 3492, 3509, 3918, 4962
Alw44I GTGCAC 1 cut(s) 1589
AlwI GGATC 4 cut(s) 616, 1314, 1510, 4042
AlwNI CAGNNNCTG 2 cut(s) 137, 482
Ama87I CYCGRG 1 cut(s) 2794
Aor13HI TCCGGA 2 cut(s) 841, 4480
Aor51HI AGCGCT 1 cut(s) 1083
AoxI GGCC 4 cut(s) 832, 2963, 3050, 4914
ApaLI GTGCAC 1 cut(s) 1589
ArsI GACNNNNNNTTYG 2 cut(s) 3658, 3690
AseI ATTAAT 1 cut(s) 4473
AsiGI ACCGGT 1 cut(s) 3170
Asp700I GAANNNNTTC 2 cut(s) 1184, 1863
Asp718I GGTACC 1 cut(s) 401
AspA2I CCTAGG 1 cut(s) 4102
AspLEI GCGC 2 cut(s) 1084, 3011
AspS9I GGNCC 7 cut(s) 833, 905, 1841, 3168, 3527, 4373, 4915
AsuC2I CCSGG 1 cut(s) 3382
AsuII TTCGAA 3 cut(s) 1970, 2310, 4502
AsuNHI GCTAGC 1 cut(s) 2926
AvaI CYCGRG 1 cut(s) 2794
AvaII GGWCC 5 cut(s) 905, 1841, 3168, 3527, 4373
AvrII CCTAGG 1 cut(s) 4102
BaeGI GKGCMC 1 cut(s) 1593
BaeI ACNNNNGTAYC 2 cut(s) 4037, 4070
BanI GGYRCC 2 cut(s) 401, 3959
BbsI GAAGAC 1 cut(s) 176
Bbv12I GWGCWC 5 cut(s) 163, 223, 372, 1593, 4344
BbvCI CCTCAGC 1 cut(s) 3290
BccI CCATC 6 cut(s) 1169, 2254, 2288, 2329, 4385, 4774
BceAI ACGGC 2 cut(s) 2249, 5056
BciT130I CCWGG 5 cut(s) 701, 1950, 2887, 4538, 4547
BciVI GTATCC 1 cut(s) 5083
BcnI CCSGG 1 cut(s) 3382
BcoDI GTCTC 8 cut(s) 784, 870, 1296, 2565, 3492, 3509, 3918, 4962
BfmI CTRYAG 5 cut(s) 1878, 1920, 1928, 3428, 3995
BfoI RGCGCY 2 cut(s) 1085, 3012
BfrI CTTAAG 2 cut(s) 643, 3482
BfuAI ACCTGC 2 cut(s) 1310, 2986
BfuI GTATCC 1 cut(s) 5083
BglII AGATCT 1 cut(s) 1000
BlnI CCTAGG 1 cut(s) 4102
BlpI GCTNAGC 3 cut(s) 222, 2640, 5037
BmcAI AGTACT 2 cut(s) 660, 2284
Bme1390I CCNGG 6 cut(s) 701, 1950, 2887, 3382, 4538, 4547
Bme18I GGWCC 5 cut(s) 905, 1841, 3168, 3527, 4373
BmeT110I CYCGRG 1 cut(s) 2794
BmgT120I GGNCC 7 cut(s) 833, 905, 1841, 3168, 3527, 4373, 4915
BmrFI CCNGG 6 cut(s) 701, 1950, 2887, 3382, 4538, 4547
BmtI GCTAGC 1 cut(s) 2930
BpiI GAAGAC 1 cut(s) 176
BplI GAGNNNNNCTC 2 cut(s) 4171, 4203
BpmI CTGGAG 3 cut(s) 722, 3213, 4320
Bpu10I CCTNAGC 1 cut(s) 3290
Bpu1102I GCTNAGC 3 cut(s) 222, 2640, 5037
Bpu14I TTCGAA 3 cut(s) 1970, 2310, 4502
BpuMI CCSGG 1 cut(s) 3382
BsaBI GATNNNNATC 1 cut(s) 2991
BsaI GGTCTC 1 cut(s) 3918
BsaJI CCNNGG 9 cut(s) 699, 1624, 2472, 2885, 2886, 3694, 4102, 4546, 4918
BsaWI WCCGGW 4 cut(s) 455, 841, 3170, 4480
BsaXI ACNNNNNCTCC 2 cut(s) 1930, 1960
Bsc4I CCNNNNNNNGG 9 cut(s) 841, 1355, 2011, 2015, 2431, 2888, 3850, 3905, 3977
Bse118I RCCGGY 1 cut(s) 3170
Bse3DI GCAATG 7 cut(s) 1886, 1921, 2464, 3114, 3190, 4418, 4861
Bse8I GATNNNNATC 1 cut(s) 2991
BseAI TCCGGA 2 cut(s) 841, 4480
BseBI CCWGG 5 cut(s) 701, 1950, 2887, 4538, 4547
BseDI CCNNGG 9 cut(s) 699, 1624, 2472, 2885, 2886, 3694, 4102, 4546, 4918
BseGI GGATG 5 cut(s) 2101, 2872, 2944, 4377, 4533
BseJI GATNNNNATC 1 cut(s) 2991
BseLI CCNNNNNNNGG 9 cut(s) 841, 1355, 2011, 2015, 2431, 2888, 3850, 3905, 3977
BseMI GCAATG 7 cut(s) 1886, 1921, 2464, 3114, 3190, 4418, 4861
BseRI GAGGAG 1 cut(s) 340
BseSI GKGCMC 1 cut(s) 1593
BsgI GTGCAG 5 cut(s) 1132, 1921, 3754, 4106, 4572
Bsh1236I CGCG 1 cut(s) 960
BshFI GGCC 4 cut(s) 834, 2965, 3052, 4916
BshNI GGYRCC 2 cut(s) 401, 3959
BshTI ACCGGT 1 cut(s) 3170
BsiHKAI GWGCWC 5 cut(s) 163, 223, 372, 1593, 4344
BsiHKCI CYCGRG 1 cut(s) 2794
BsiSI CCGG 5 cut(s) 456, 842, 3171, 3381, 4481
BslFI GGGAC 5 cut(s) 1423, 1437, 1735, 4359, 4933
BslI CCNNNNNNNGG 9 cut(s) 841, 1355, 2011, 2015, 2431, 2888, 3850, 3905, 3977
BsmAI GTCTC 8 cut(s) 784, 870, 1296, 2565, 3492, 3509, 3918, 4962
BsmFI GGGAC 5 cut(s) 1423, 1437, 1735, 4359, 4933
BsnI GGCC 4 cut(s) 834, 2965, 3052, 4916
Bso31I GGTCTC 1 cut(s) 3918
BsoBI CYCGRG 1 cut(s) 2794
Bsp119I TTCGAA 3 cut(s) 1970, 2310, 4502
Bsp1286I GDGCHC 5 cut(s) 163, 223, 372, 1593, 4344
Bsp13I TCCGGA 2 cut(s) 841, 4480
Bsp1407I TGTACA 1 cut(s) 2748
Bsp1720I GCTNAGC 3 cut(s) 222, 2640, 5037
Bsp19I CCATGG 2 cut(s) 1624, 4918
BspACI CCGC 4 cut(s) 294, 958, 2872, 4952
BspANI GGCC 4 cut(s) 834, 2965, 3052, 4916
BspEI TCCGGA 2 cut(s) 841, 4480
BspFNI CGCG 1 cut(s) 960
BspHI TCATGA 1 cut(s) 4399
BspMAI CTGCAG 1 cut(s) 3999
BspMI ACCTGC 2 cut(s) 1310, 2986
BspOI GCTAGC 1 cut(s) 2930
BspPI GGATC 4 cut(s) 616, 1314, 1510, 4042
BspQI GCTCTTC 1 cut(s) 168
BspT104I TTCGAA 3 cut(s) 1970, 2310, 4502
BspT107I GGYRCC 2 cut(s) 401, 3959
BspTI CTTAAG 2 cut(s) 643, 3482
BspTNI GGTCTC 1 cut(s) 3918
BsrDI GCAATG 7 cut(s) 1886, 1921, 2464, 3114, 3190, 4418, 4861
BsrFI RCCGGY 1 cut(s) 3170
BsrGI TGTACA 1 cut(s) 2748
BssAI RCCGGY 1 cut(s) 3170
BssECI CCNNGG 9 cut(s) 699, 1624, 2472, 2885, 2886, 3694, 4102, 4546, 4918
BssNAI GTATAC 1 cut(s) 3230
BssT1I CCWWGG 5 cut(s) 1624, 2472, 3694, 4102, 4918
Bst1107I GTATAC 1 cut(s) 3230
Bst2UI CCWGG 5 cut(s) 701, 1950, 2887, 4538, 4547
Bst4CI ACNGT 7 cut(s) 139, 813, 1967, 2917, 2958, 4499, 4632
Bst6I CTCTTC 5 cut(s) 168, 1692, 2085, 3495, 3537
BstAFI CTTAAG 2 cut(s) 643, 3482
BstAUI TGTACA 1 cut(s) 2748
BstBI TTCGAA 3 cut(s) 1970, 2310, 4502
BstDSI CCRYGG 2 cut(s) 1624, 4918
BstENI CCTNNNNNAGG 2 cut(s) 2013, 2429
BstF5I GGATG 5 cut(s) 2101, 2872, 2944, 4377, 4533
BstFNI CGCG 1 cut(s) 960
BstH2I RGCGCY 2 cut(s) 1085, 3012
BstHHI GCGC 2 cut(s) 1084, 3011
BstMAI GTCTC 8 cut(s) 784, 870, 1296, 2565, 3492, 3509, 3918, 4962
BstMWI GCNNNNNNNGC 7 cut(s) 328, 735, 1378, 1666, 2223, 4198, 5047
BstNI CCWGG 5 cut(s) 701, 1950, 2887, 4538, 4547
BstNSI RCATGY 8 cut(s) 670, 2101, 2539, 2940, 3156, 4596, 4621, 4936
BstSCI CCNGG 6 cut(s) 699, 1948, 2885, 3380, 4536, 4545
BstSFI CTRYAG 5 cut(s) 1878, 1920, 1928, 3428, 3995
BstSLI GKGCMC 1 cut(s) 1593
BstUI CGCG 1 cut(s) 960
BstV2I GAAGAC 1 cut(s) 176
BstX2I RGATCY 3 cut(s) 621, 1000, 1306
BstXI CCANNNNNNTGG 7 cut(s) 255, 700, 1190, 2479, 3452, 3596, 3812
BstYI RGATCY 3 cut(s) 621, 1000, 1306
BstZ17I GTATAC 1 cut(s) 3230
BsuI GTATCC 1 cut(s) 5083
BsuRI GGCC 4 cut(s) 834, 2965, 3052, 4916
BtgI CCRYGG 2 cut(s) 1624, 4918
BtsCI GGATG 5 cut(s) 2101, 2872, 2944, 4377, 4533
BtsI GCAGTG 4 cut(s) 276, 2634, 3717, 5031
BveI ACCTGC 2 cut(s) 1310, 2986
CaiI CAGNNNCTG 2 cut(s) 137, 482
CciI TCATGA 1 cut(s) 4399
CfoI GCGC 2 cut(s) 1084, 3011
Cfr10I RCCGGY 1 cut(s) 3170
Cfr13I GGNCC 7 cut(s) 833, 905, 1841, 3168, 3527, 4373, 4915
CspAI ACCGGT 1 cut(s) 3170
Eam1104I CTCTTC 5 cut(s) 168, 1692, 2085, 3495, 3537
EarI CTCTTC 5 cut(s) 168, 1692, 2085, 3495, 3537
Eco130I CCWWGG 5 cut(s) 1624, 2472, 3694, 4102, 4918
Eco147I AGGCCT 1 cut(s) 2965
Eco31I GGTCTC 1 cut(s) 3918
Eco32I GATATC 1 cut(s) 4663
Eco47I GGWCC 5 cut(s) 905, 1841, 3168, 3527, 4373
Eco47III AGCGCT 1 cut(s) 1083
Eco57I CTGAAG 6 cut(s) 114, 1224, 2874, 3069, 3846, 3938
Eco88I CYCGRG 1 cut(s) 2794
EcoNI CCTNNNNNAGG 2 cut(s) 2013, 2429
EcoO109I RGGNCCY 1 cut(s) 4373
EcoRI GAATTC 1 cut(s) 4161
EcoRII CCWGG 5 cut(s) 699, 1948, 2885, 4536, 4545
EcoRV GATATC 1 cut(s) 4663
EcoT14I CCWWGG 5 cut(s) 1624, 2472, 3694, 4102, 4918
EcoT22I ATGCAT 2 cut(s) 2103, 3154
ErhI CCWWGG 5 cut(s) 1624, 2472, 3694, 4102, 4918
FalI AAGNNNNNCTT 6 cut(s) 315, 347, 2423, 2455, 4746, 4778
FaqI GGGAC 5 cut(s) 1423, 1437, 1735, 4359, 4933
FauI CCCGC 1 cut(s) 4959
FauNDI CATATG 1 cut(s) 779
FblI GTMKAC 2 cut(s) 1927, 3229
FokI GGATG 5 cut(s) 2088, 2879, 2931, 4364, 4520
GlaI GCGC 2 cut(s) 1083, 3010
GsuI CTGGAG 3 cut(s) 722, 3213, 4320
HaeII RGCGCY 2 cut(s) 1085, 3012
HaeIII GGCC 4 cut(s) 834, 2965, 3052, 4916
HapII CCGG 5 cut(s) 456, 842, 3171, 3381, 4481
HhaI GCGC 2 cut(s) 1084, 3011
Hin6I GCGC 2 cut(s) 1082, 3009
HinP1I GCGC 2 cut(s) 1082, 3009
HincII GTYRAC 4 cut(s) 1437, 1737, 1816, 4598
HindII GTYRAC 4 cut(s) 1437, 1737, 1816, 4598
HindIII AAGCTT 6 cut(s) 856, 1135, 1729, 2240, 4760, 5039
HpaII CCGG 5 cut(s) 456, 842, 3171, 3381, 4481
HpyCH4III ACNGT 7 cut(s) 139, 813, 1967, 2917, 2958, 4499, 4632
HpyF10VI GCNNNNNNNGC 7 cut(s) 328, 735, 1378, 1666, 2223, 4198, 5047
HspAI GCGC 2 cut(s) 1082, 3009
KflI GGGWCCC 1 cut(s) 4373
Kpn2I TCCGGA 2 cut(s) 841, 4480
KpnI GGTACC 1 cut(s) 405
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 9 cut(s) 47, 586, 1079, 1879, 2304, 2487, 3605, 4339, 4411
MfeI CAATTG 5 cut(s) 921, 2559, 3543, 4956, 5084
MflI RGATCY 3 cut(s) 621, 1000, 1306
MhlI GDGCHC 5 cut(s) 163, 223, 372, 1593, 4344
MlyI GAGTC 8 cut(s) 1173, 1360, 1687, 1939, 3795, 3982, 4219, 5048
MmeI TCCRAC 2 cut(s) 434, 4236
Mph1103I ATGCAT 2 cut(s) 2103, 3154
MroI TCCGGA 2 cut(s) 841, 4480
MroXI GAANNNNTTC 2 cut(s) 1184, 1863
MslI CAYNNNNRTG 5 cut(s) 2544, 3157, 3901, 4131, 4941
MspA1I CMGCKG 2 cut(s) 1660, 2828
MspCI CTTAAG 2 cut(s) 643, 3482
MspI CCGG 5 cut(s) 456, 842, 3171, 3381, 4481
MspR9I CCNGG 6 cut(s) 701, 1950, 2887, 3382, 4538, 4547
MunI CAATTG 5 cut(s) 921, 2559, 3543, 4956, 5084
MvaI CCWGG 5 cut(s) 701, 1950, 2887, 4538, 4547
MvnI CGCG 1 cut(s) 960
MwoI GCNNNNNNNGC 7 cut(s) 328, 735, 1378, 1666, 2223, 4198, 5047
NciI CCSGG 1 cut(s) 3382
NcoI CCATGG 2 cut(s) 1624, 4918
NdeI CATATG 1 cut(s) 779
NheI GCTAGC 1 cut(s) 2926
NmeAIII GCCGAG 1 cut(s) 1348
NmuCI GTSAC 7 cut(s) 289, 782, 1247, 2728, 2820, 4211, 4267
NsiI ATGCAT 2 cut(s) 2103, 3154
NspI RCATGY 8 cut(s) 670, 2101, 2539, 2940, 3156, 4596, 4621, 4936
NspV TTCGAA 3 cut(s) 1970, 2310, 4502
PaeI GCATGC 2 cut(s) 2940, 3156
PagI TCATGA 1 cut(s) 4399
PaqCI CACCTGC 1 cut(s) 2986
PasI CCCWGGG 1 cut(s) 2886
PceI AGGCCT 1 cut(s) 2965
PciI ACATGT 3 cut(s) 666, 4592, 4617
PciSI GCTCTTC 1 cut(s) 168
PdmI GAANNNNTTC 2 cut(s) 1184, 1863
PfoI TCCNGGA 1 cut(s) 3380
PinAI ACCGGT 1 cut(s) 3170
PleI GAGTC 8 cut(s) 1172, 1360, 1686, 1939, 3794, 3982, 4218, 5048
PpsI GAGTC 8 cut(s) 1172, 1360, 1686, 1939, 3794, 3982, 4218, 5048
PpuMI RGGWCCY 1 cut(s) 4373
PscI ACATGT 3 cut(s) 666, 4592, 4617
PshBI ATTAAT 1 cut(s) 4473
Psp5II RGGWCCY 1 cut(s) 4373
Psp6I CCWGG 5 cut(s) 699, 1948, 2885, 4536, 4545
PspGI CCWGG 5 cut(s) 699, 1948, 2885, 4536, 4545
PspPI GGNCC 7 cut(s) 833, 905, 1841, 3168, 3527, 4373, 4915
PspPPI RGGWCCY 1 cut(s) 4373
PsrI GAACNNNNNNTAC 2 cut(s) 1964, 1996
PstI CTGCAG 1 cut(s) 3999
PstNI CAGNNNCTG 2 cut(s) 137, 482
PsuI RGATCY 3 cut(s) 621, 1000, 1306
PvuII CAGCTG 2 cut(s) 1660, 2828
RseI CAYNNNNRTG 5 cut(s) 2544, 3157, 3901, 4131, 4941
SapI GCTCTTC 1 cut(s) 168
Sau96I GGNCC 7 cut(s) 833, 905, 1841, 3168, 3527, 4373, 4915
ScaI AGTACT 2 cut(s) 660, 2284
SchI GAGTC 8 cut(s) 1173, 1360, 1687, 1939, 3795, 3982, 4219, 5048
ScrFI CCNGG 6 cut(s) 701, 1950, 2887, 3382, 4538, 4547
SduI GDGCHC 5 cut(s) 163, 223, 372, 1593, 4344
SfcI CTRYAG 5 cut(s) 1878, 1920, 1928, 3428, 3995
SfuI TTCGAA 3 cut(s) 1970, 2310, 4502
SinI GGWCC 5 cut(s) 905, 1841, 3168, 3527, 4373
SmiMI CAYNNNNRTG 5 cut(s) 2544, 3157, 3901, 4131, 4941
SphI GCATGC 2 cut(s) 2940, 3156
SseBI AGGCCT 1 cut(s) 2965
SsiI CCGC 4 cut(s) 294, 958, 2872, 4952
SspI AATATT 1 cut(s) 850
StuI AGGCCT 1 cut(s) 2965
StyD4I CCNGG 6 cut(s) 699, 1948, 2885, 3380, 4536, 4545
StyI CCWWGG 5 cut(s) 1624, 2472, 3694, 4102, 4918
TaaI ACNGT 7 cut(s) 139, 813, 1967, 2917, 2958, 4499, 4632
TatI WGTACW 4 cut(s) 658, 1456, 2282, 2748
TseFI GTSAC 7 cut(s) 289, 782, 1247, 2728, 2820, 4211, 4267
Tsp45I GTSAC 7 cut(s) 289, 782, 1247, 2728, 2820, 4211, 4267
TspGWI ACGGA 6 cut(s) 1157, 1319, 1724, 3900, 4186, 4636
Vha464I CTTAAG 2 cut(s) 643, 3482
VneI GTGCAC 1 cut(s) 1589
VpaK11BI GGWCC 5 cut(s) 905, 1841, 3168, 3527, 4373
VspI ATTAAT 1 cut(s) 4473
XagI CCTNNNNNAGG 2 cut(s) 2013, 2429
XbaI TCTAGA 1 cut(s) 3274
XceI RCATGY 8 cut(s) 670, 2101, 2539, 2940, 3156, 4596, 4621, 4936
XmaJI CCTAGG 1 cut(s) 4102
XmiI GTMKAC 2 cut(s) 1927, 3229
XmnI GAANNNNTTC 2 cut(s) 1184, 1863
ZrmI AGTACT 2 cut(s) 660, 2284
Zsp2I ATGCAT 2 cut(s) 2103, 3154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.