pycom04g03330

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
3020591 .. 3023182
2592 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g03330.1

Sequence Viewer

Length: 2499 bp
ATGACATTTCTTTATATGCTCCTGCTGCTGTCCGCATTGCCACTGATCAAACCGACATCAATATCGCCAAGACAACAAGCCAAATCACTCATCAAATGGAAGGACGGCTTTTCTTCACCATCATTATCATCGCCACCTTCGCTACTCAATTCATGGTCCCTCACCAACCTCAACAGCCTCTGCAACTGGACTGCCATTTCCTGCTCCAAAACTAGAACAGTCTCCAAAATAGACCTCTCCGATATGCTAATTTTCGGAACACTGTCCCTTTTCGACTTTTCCTCATTTCCAAATCTCACCCACTTCAATCTAATTGGCAACTATTTCGATGGGCCTATACCATCTGAGATTGGCCAGGTAACAGAGCTTCAGTATCTAAATCTCCGCAACAACGGTCTCTATAGTACCATCCCTTATCAACTGAGCAATCTCAAAAAGGTACGGTACATGGACCTTGGATTAAACTATTTTAACAATACTGATCGATATTGGTCAGAATTTGCAGGCATGCCCTCATTGACCTACCTTGCTATGTCTATGCGAGGTGATAATCGATATCATTCAGAATTCCCAGAATTTATATCTCAATGCCAGAACTTAACGTTCCTCGACTTGTCTCAAATTAATTTGAACGGCCAAATTCCGCCTTCGATAGGCCAACTCAGGGAGCTCCAGTACCTTGATCTTTCATACAACTCCTTAAACTCATCAATCCCTCTCTCTATAGGCCAACTCGGGGAGCTCCAGTACCTTGATCTTTCATACAACTCCTTAAACTCTTCTATCCCTTCTGAGCTTGGTCTTTGTACAAACCTCACCCACTTGTCCTTGTCTTCCAATAAACTCAATGGGGAACTGCCTCTGTCCTTGTCCAATCTGAACAACCTCGTCGAATTGGGTTTAGATAATAATCTATTTACTGGTCAAATCCTTCCTTCTCTAGTCTCCAATTGGACTAAAATGGTCTCGTTGCAACTTCAGTCTAATGAACACAGTGGGGAGATTCCGACGGAAGTTGGAAATATGAGCTTTCTGTTGACGCTCAATCTAGCAAGGAACCACTTGACAGGAGTGATCCCTCATAATCTAGGCAATTTAGCTCTGCTTCAGCTGCTCAATTTGTCGTACAATGACTTGAAAGGAGTGATCCCACGGTTTGTGGGATTAAGTTTAGAGGTTCTCAGTATCTCACACAACCATCTTTCAGGGCAAATCCCACCATGTGTCAACACGCCTCATGCCTTTGATTTTTCTTATAACAACTTGACTGGCCCAATCCCAGGCGTTTTCCAAGGGGCACCAGAAAATGCTTTTGATGGAAACCCTGGGTTGTGTGGGTATTTAGAGTGTGTAGACAGTATATCCCCTCGGCACAATAGAAATTCCGAAAAGAATAACAAAAGAGTTCTAATTGGTATCCTTGTGCCTGTCTGTGGTTTATTAATGGTTACAACTGTCATTGGTCTTATGTTCCGTAAAAAATCCATTCTCGTTTTGAACAAAGTCAACACTTCTGAAAACTTTAAGAGTTTGGAGTCAATGATATTGCAAGAGGAAGTAAAGTTTACGTTTGCAGAAGTTGTGAAGGCTGTAGATGACTTTCATGAGAAGCACTGCATTGGGGCAGGAGGGTTTGGAAGGGTTTACAAGGCAGAGTTGCAATCAGGCCAAGTTGTTGCAGTTAAAAGGCTTAACATGTCAGACTCTAATGATATTCCAGCAATCAATCTCCAAAGCTTTCAGAATGAAATCCGAACTTTGACAAGCATCCGACACCGGAACATCATAAGGCTCTATGGCTTCTGTTCAAGAAGGGGGGGTTGCATATTCCTACTTTATGAATACTTAGAGAGAGGAAGCCTGGGAAAAGCTTTGTATGGAGTTGAAGGTGTTAATGAACTTGTTTGGGCTACTAGAGTCAAAATTGTGCAAGGACTTGCTCATGCACTTTCTTACTTGCACCATGATTGCTCTCCACCAATTGTGCACCGTGACATAACCGTCAACAATGTATTGCTTGAGTTTGATTTCGAGGTTCGTCTCTCAGATTTCGGAATAGCCAGGTTATTGAGTACAGATTCATCCAACTGGACAGATATCGCTGGTTCATTTGGCTACATAGCACCAGAGCTTGCATACACTATGCGAGTCACGGATAAATGTGATGTATATAGCTTTGGAGTGGTGGCGCTCGAAGTCATGATGGGAAGGCACCCAGGAGATATGCTAGAGTCCCAGCTACAAGAATCATCAAAATCAAGGAGGGACAATGTAGAATTGCTCCTGAAAGATTTGTTAGACCAAAGGTCGGAACCGCCAACCAATGAATCTGCAAAGGCAGTGGTGCTTGTAGTGACAATGGCCTTGGCCTGTGTACGAACGCGTCCAGCGTCCAGACCTACGATGTTATTTACGGCACAAAAACTCTCAGCTCAAACCCTGCCTTGCCTTCCCGAACCATTTGGTATGTTGACAATCAACAAGCTAATGGCACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

833

Amino Acids

92.53

Weight (kDa)

6.33

Isoelectric Point (pI)

38.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 141 - 305 1.4e-10 Leucine-rich repeat region
LRR_8 PF13855 199 - 258 3.9e-06 Leucine rich repeat
Pkinase PF00069 534 - 801 3.7e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 537 - 803 4.1e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1257
AasI GACNNNNNNGTC 1 cut(s) 2000
AccB1I GGYRCC 2 cut(s) 1297, 2211
AccI GTMKAC 1 cut(s) 1353
AccII CGCG 1 cut(s) 2383
AciI CCGC 4 cut(s) 33, 385, 644, 2315
AclI AACGTT 1 cut(s) 602
AclWI GGATC 2 cut(s) 1069, 1141
AcoI YGGCCR 2 cut(s) 352, 634
AcsI RAATTY 5 cut(s) 497, 566, 575, 639, 1381
AcuI CTGAAG 3 cut(s) 353, 962, 1091
AdeI CACNNNGTG 1 cut(s) 1223
AfaI GTAC 9 cut(s) 406, 441, 446, 677, 749, 808, 1127, 2074, 2376
AfiI CCNNNNNNNGG 6 cut(s) 653, 664, 736, 1280, 1433, 2308
AflIII ACRYGT 2 cut(s) 1695, 2381
AgsI TTSAA 6 cut(s) 307, 631, 1138, 1498, 1809, 1886
AhdI GACNNNNNGTC 1 cut(s) 2305
AjnI CCWGG 6 cut(s) 354, 1279, 1324, 1860, 2060, 2215
Alw21I GWGCWC 3 cut(s) 672, 744, 1989
Alw26I GTCTC 6 cut(s) 226, 401, 621, 949, 970, 2045
Alw44I GTGCAC 1 cut(s) 1985
AlwI GGATC 2 cut(s) 1069, 1141
AlwNI CAGNNNCTG 1 cut(s) 180
Ama87I CYCGRG 1 cut(s) 734
AoxI GGCC 9 cut(s) 332, 352, 634, 655, 727, 1270, 1666, 2361, 2367
ApaLI GTGCAC 1 cut(s) 1985
ApeKI GCWGC 2 cut(s) 25, 1111
ApoI RAATTY 5 cut(s) 497, 566, 575, 639, 1381
AseI ATTAAT 2 cut(s) 624, 1442
AspLEI GCGC 1 cut(s) 2191
AspS9I GGNCC 4 cut(s) 156, 332, 451, 1271
AsuHPI GGTGA 5 cut(s) 108, 154, 289, 557, 808
AvaI CYCGRG 1 cut(s) 734
AvaII GGWCC 2 cut(s) 156, 451
BaeGI GKGCMC 2 cut(s) 1300, 1989
BalI TGGCCA 1 cut(s) 354
BanI GGYRCC 2 cut(s) 1297, 2211
BanII GRGCYC 2 cut(s) 672, 744
BarI GAAGNNNNNNTAC 2 cut(s) 351, 383
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 3 cut(s) 672, 744, 1989
BbvI GCAGC 2 cut(s) 12, 1098
BccI CCATC 7 cut(s) 127, 323, 349, 416, 1206, 1310, 2197
BceAI ACGGC 3 cut(s) 121, 649, 2430
BcgI CGANNNNNNTGC 2 cut(s) 307, 341
BciT130I CCWGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
BciVI GTATCC 1 cut(s) 1427
BclI TGATCA 1 cut(s) 45
BcoDI GTCTC 6 cut(s) 226, 401, 621, 949, 970, 2045
BfaI CTAG 6 cut(s) 213, 941, 1049, 1088, 1914, 2228
BfmI CTRYAG 3 cut(s) 400, 723, 1590
BfoI RGCGCY 1 cut(s) 2192
BfuI GTATCC 1 cut(s) 1427
BisI GCNGC 2 cut(s) 26, 1112
BlsI GCNGC 2 cut(s) 27, 1113
Bme1390I CCNGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
Bme18I GGWCC 2 cut(s) 156, 451
BmeRI GACNNNNNGTC 1 cut(s) 2305
BmeT110I CYCGRG 1 cut(s) 734
BmgT120I GGNCC 4 cut(s) 156, 332, 451, 1271
BmiI GGNNCC 5 cut(s) 158, 1058, 1299, 2213, 2313
BmrFI CCNGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
BmsI GCATC 1 cut(s) 1776
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 2 cut(s) 656, 728
BpuEI CTTGAG 1 cut(s) 2039
Bsa29I ATCGAT 2 cut(s) 484, 553
BsaBI GATNNNNATC 1 cut(s) 909
BsaI GGTCTC 2 cut(s) 401, 970
BsaWI WCCGGW 1 cut(s) 1776
BsaXI ACNNNNNCTCC 4 cut(s) 659, 689, 731, 761
Bsc4I CCNNNNNNNGG 6 cut(s) 653, 664, 736, 1280, 1433, 2308
Bse1I ACTGG 6 cut(s) 191, 673, 745, 925, 1273, 2093
Bse3DI GCAATG 1 cut(s) 35
Bse8I GATNNNNATC 1 cut(s) 909
BseBI CCWGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
BseCI ATCGAT 2 cut(s) 484, 553
BseGI GGATG 3 cut(s) 408, 1767, 2081
BseJI GATNNNNATC 1 cut(s) 909
BseLI CCNNNNNNNGG 6 cut(s) 653, 664, 736, 1280, 1433, 2308
BseMI GCAATG 1 cut(s) 35
BseMII CTCAG 7 cut(s) 336, 413, 676, 783, 1195, 2058, 2442
BseNI ACTGG 6 cut(s) 191, 673, 745, 925, 1273, 2093
BseSI GKGCMC 2 cut(s) 1300, 1989
BseXI GCAGC 2 cut(s) 12, 1098
BseYI CCCAGC 1 cut(s) 2235
Bsh1236I CGCG 1 cut(s) 2383
BshFI GGCC 9 cut(s) 334, 354, 636, 657, 729, 1272, 1668, 2363, 2369
BshNI GGYRCC 2 cut(s) 1297, 2211
BshVI ATCGAT 2 cut(s) 484, 553
BsiHKAI GWGCWC 3 cut(s) 672, 744, 1989
BsiHKCI CYCGRG 1 cut(s) 734
BsiSI CCGG 1 cut(s) 1777
BslFI GGGAC 4 cut(s) 142, 250, 2218, 2279
BslI CCNNNNNNNGG 6 cut(s) 653, 664, 736, 1280, 1433, 2308
BsmAI GTCTC 6 cut(s) 226, 401, 621, 949, 970, 2045
BsmBI CGTCTC 1 cut(s) 2045
BsmFI GGGAC 4 cut(s) 142, 250, 2218, 2279
BsnI GGCC 9 cut(s) 334, 354, 636, 657, 729, 1272, 1668, 2363, 2369
Bso31I GGTCTC 2 cut(s) 401, 970
BsoBI CYCGRG 1 cut(s) 734
Bsp1286I GDGCHC 4 cut(s) 672, 744, 1300, 1989
Bsp1407I TGTACA 1 cut(s) 806
Bsp143I GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
BspACI CCGC 4 cut(s) 33, 385, 644, 2315
BspANI GGCC 9 cut(s) 334, 354, 636, 657, 729, 1272, 1668, 2363, 2369
BspCNI CTCAG 7 cut(s) 337, 414, 675, 784, 1194, 2057, 2441
BspDI ATCGAT 2 cut(s) 484, 553
BspFNI CGCG 1 cut(s) 2383
BspHI TCATGA 2 cut(s) 1603, 2199
BspLI GGNNCC 5 cut(s) 158, 1058, 1299, 2213, 2313
BspPI GGATC 2 cut(s) 1069, 1141
BspT107I GGYRCC 2 cut(s) 1297, 2211
BspTNI GGTCTC 2 cut(s) 401, 970
BsrDI GCAATG 1 cut(s) 35
BsrGI TGTACA 1 cut(s) 806
BsrI ACTGG 6 cut(s) 191, 673, 745, 925, 1273, 2093
BssMI GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
BssT1I CCWWGG 3 cut(s) 454, 1291, 2364
Bst2UI CCWGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
Bst6I CTCTTC 1 cut(s) 784
BstAUI TGTACA 1 cut(s) 806
BstC8I GCNNGC 3 cut(s) 505, 509, 2133
BstDEI CTNAG 8 cut(s) 345, 422, 662, 792, 1181, 1846, 2044, 2428
BstDSI CCRYGG 1 cut(s) 1151
BstENI CCTNNNNNAGG 1 cut(s) 651
BstF5I GGATG 3 cut(s) 408, 1767, 2081
BstFNI CGCG 1 cut(s) 2383
BstH2I RGCGCY 1 cut(s) 2192
BstHHI GCGC 1 cut(s) 2191
BstKTI GATC 6 cut(s) 48, 484, 685, 757, 1077, 1149
BstMAI GTCTC 6 cut(s) 226, 401, 621, 949, 970, 2045
BstMBI GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
BstMWI GCNNNNNNNGC 3 cut(s) 25, 139, 1111
BstNI CCWGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
BstNSI RCATGY 2 cut(s) 511, 1699
BstSCI CCNGG 6 cut(s) 354, 1279, 1324, 1860, 2060, 2215
BstSFI CTRYAG 3 cut(s) 400, 723, 1590
BstSLI GKGCMC 2 cut(s) 1300, 1989
BstUI CGCG 1 cut(s) 2383
BstV1I GCAGC 2 cut(s) 12, 1098
BstV2I GAAGAC 1 cut(s) 825
Bsu15I ATCGAT 2 cut(s) 484, 553
BsuI GTATCC 1 cut(s) 1427
BsuRI GGCC 9 cut(s) 334, 354, 636, 657, 729, 1272, 1668, 2363, 2369
BsuTUI ATCGAT 2 cut(s) 484, 553
BtgI CCRYGG 1 cut(s) 1151
BtgZI GCGATG 1 cut(s) 114
BtsCI GGATG 3 cut(s) 408, 1767, 2081
BtsI GCAGTG 2 cut(s) 1612, 2346
BtsIMutI CAGTG 5 cut(s) 41, 260, 1000, 1612, 2346
Cac8I GCNNGC 3 cut(s) 505, 509, 2133
CaiI CAGNNNCTG 1 cut(s) 180
CciI TCATGA 2 cut(s) 1603, 2199
CfoI GCGC 1 cut(s) 2191
Cfr13I GGNCC 4 cut(s) 156, 332, 451, 1271
ClaI ATCGAT 2 cut(s) 484, 553
CseI GACGC 3 cut(s) 1048, 2372, 2379
Csp6I GTAC 9 cut(s) 405, 440, 445, 676, 748, 807, 1126, 2073, 2375
CspCI CAANNNNNGTGG 2 cut(s) 2322, 2357
CviQI GTAC 9 cut(s) 405, 440, 445, 676, 748, 807, 1126, 2073, 2375
DdeI CTNAG 8 cut(s) 345, 422, 662, 792, 1181, 1846, 2044, 2428
DpnI GATC 6 cut(s) 47, 483, 684, 756, 1076, 1148
DpnII GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
DraIII CACNNNGTG 1 cut(s) 1223
DrdI GACNNNNNNGTC 1 cut(s) 2000
DriI GACNNNNNGTC 1 cut(s) 2305
DseDI GACNNNNNNGTC 1 cut(s) 2000
EaeI YGGCCR 2 cut(s) 352, 634
Eam1104I CTCTTC 1 cut(s) 784
Eam1105I GACNNNNNGTC 1 cut(s) 2305
EarI CTCTTC 1 cut(s) 784
EciI GGCGGA 1 cut(s) 633
Ecl136II GAGCTC 2 cut(s) 670, 742
Eco130I CCWWGG 3 cut(s) 454, 1291, 2364
Eco24I GRGCYC 2 cut(s) 672, 744
Eco31I GGTCTC 2 cut(s) 401, 970
Eco32I GATATC 2 cut(s) 557, 2098
Eco47I GGWCC 2 cut(s) 156, 451
Eco53kI GAGCTC 2 cut(s) 670, 742
Eco57I CTGAAG 3 cut(s) 353, 962, 1091
Eco88I CYCGRG 1 cut(s) 734
EcoICRI GAGCTC 2 cut(s) 670, 742
EcoNI CCTNNNNNAGG 1 cut(s) 651
EcoRI GAATTC 1 cut(s) 566
EcoRII CCWGG 6 cut(s) 354, 1279, 1324, 1860, 2060, 2215
EcoRV GATATC 2 cut(s) 557, 2098
EcoT14I CCWWGG 3 cut(s) 454, 1291, 2364
EcoT38I GRGCYC 2 cut(s) 672, 744
ErhI CCWWGG 3 cut(s) 454, 1291, 2364
Esp3I CGTCTC 1 cut(s) 2045
FalI AAGNNNNNCTT 2 cut(s) 92, 124
FaqI GGGAC 4 cut(s) 142, 250, 2218, 2279
FbaI TGATCA 1 cut(s) 45
FblI GTMKAC 1 cut(s) 1353
Fnu4HI GCNGC 2 cut(s) 26, 1112
FokI GGATG 3 cut(s) 395, 1754, 2068
FriOI GRGCYC 2 cut(s) 672, 744
Fsp4HI GCNGC 2 cut(s) 26, 1112
FspBI CTAG 6 cut(s) 213, 941, 1049, 1088, 1914, 2228
GlaI GCGC 1 cut(s) 2190
GluI GCNGC 2 cut(s) 26, 1112
GsaI CCCAGC 1 cut(s) 2239
GsuI CTGGAG 2 cut(s) 656, 728
HaeII RGCGCY 1 cut(s) 2192
HaeIII GGCC 9 cut(s) 334, 354, 636, 657, 729, 1272, 1668, 2363, 2369
HapII CCGG 1 cut(s) 1777
HgaI GACGC 3 cut(s) 1048, 2372, 2379
HhaI GCGC 1 cut(s) 2191
Hin6I GCGC 1 cut(s) 2189
HinP1I GCGC 1 cut(s) 2189
HincII GTYRAC 5 cut(s) 1038, 1228, 1507, 2005, 2472
HindII GTYRAC 5 cut(s) 1038, 1228, 1507, 2005, 2472
HindIII AAGCTT 2 cut(s) 1735, 1869
HinfI GANTC 9 cut(s) 1003, 1535, 1703, 1917, 2078, 2148, 2231, 2246, 2327
HpaII CCGG 1 cut(s) 1777
HphI GGTGA 5 cut(s) 108, 154, 289, 557, 808
Hpy188III TCNNGA 6 cut(s) 1604, 1809, 2200, 2284, 2394, 2453
Hpy99I CGWCG 2 cut(s) 893, 1012
HpyCH4IV ACGT 2 cut(s) 602, 1568
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 139, 1111
HpyF3I CTNAG 8 cut(s) 345, 422, 662, 792, 1181, 1846, 2044, 2428
HpySE526I ACGT 2 cut(s) 602, 1568
HspAI GCGC 1 cut(s) 2189
Ksp22I TGATCA 1 cut(s) 45
Kzo9I GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
LmnI GCTCC 7 cut(s) 24, 209, 667, 675, 739, 747, 2286
Lsp1109I GCAGC 2 cut(s) 12, 1098
LweI GCATC 1 cut(s) 1776
MaeI CTAG 6 cut(s) 213, 941, 1049, 1088, 1914, 2228
MaeII ACGT 2 cut(s) 602, 1568
MaeIII GTNAC 5 cut(s) 358, 1447, 1991, 2149, 2353
MalI GATC 6 cut(s) 47, 483, 684, 756, 1076, 1148
MboI GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
MboII GAAGA 3 cut(s) 105, 771, 825
MfeI CAATTG 2 cut(s) 949, 1980
MhlI GDGCHC 4 cut(s) 672, 744, 1300, 1989
MlsI TGGCCA 1 cut(s) 354
MluI ACGCGT 1 cut(s) 2381
MluNI TGGCCA 1 cut(s) 354
MlyI GAGTC 5 cut(s) 1544, 1697, 1926, 2157, 2240
MmeI TCCRAC 5 cut(s) 997, 1031, 1795, 2109, 2289
Mox20I TGGCCA 1 cut(s) 354
MscI TGGCCA 1 cut(s) 354
Msp20I TGGCCA 1 cut(s) 354
MspA1I CMGCKG 1 cut(s) 1111
MspI CCGG 1 cut(s) 1777
MspR9I CCNGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
MunI CAATTG 2 cut(s) 949, 1980
MvaI CCWGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
MvnI CGCG 1 cut(s) 2383
MwoI GCNNNNNNNGC 3 cut(s) 25, 139, 1111
NdeII GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
NlaIV GGNNCC 5 cut(s) 158, 1058, 1299, 2213, 2313
NmeAIII GCCGAG 1 cut(s) 1348
NmuCI GTSAC 3 cut(s) 1991, 2149, 2353
NspI RCATGY 2 cut(s) 511, 1699
PaeI GCATGC 1 cut(s) 511
PagI TCATGA 2 cut(s) 1603, 2199
PasI CCCWGGG 1 cut(s) 1325
PciI ACATGT 1 cut(s) 1695
PcsI WCGNNNNNNNCGW 1 cut(s) 2387
PfeI GAWTC 4 cut(s) 1003, 2078, 2246, 2327
PkrI GCNGC 2 cut(s) 27, 1113
PleI GAGTC 5 cut(s) 1543, 1697, 1925, 2156, 2239
PpsI GAGTC 5 cut(s) 1543, 1697, 1925, 2156, 2239
PscI ACATGT 1 cut(s) 1695
PshBI ATTAAT 2 cut(s) 624, 1442
PsiI TTATAA 1 cut(s) 1257
Psp124BI GAGCTC 2 cut(s) 672, 744
Psp1406I AACGTT 1 cut(s) 602
Psp6I CCWGG 6 cut(s) 354, 1279, 1324, 1860, 2060, 2215
PspFI CCCAGC 1 cut(s) 2235
PspGI CCWGG 6 cut(s) 354, 1279, 1324, 1860, 2060, 2215
PspN4I GGNNCC 5 cut(s) 158, 1058, 1299, 2213, 2313
PspPI GGNCC 4 cut(s) 156, 332, 451, 1271
PstNI CAGNNNCTG 1 cut(s) 180
PvuII CAGCTG 1 cut(s) 1111
RsaI GTAC 9 cut(s) 406, 441, 446, 677, 749, 808, 1127, 2074, 2376
RsaNI GTAC 9 cut(s) 405, 440, 445, 676, 748, 807, 1126, 2073, 2375
SacI GAGCTC 2 cut(s) 672, 744
SatI GCNGC 2 cut(s) 26, 1112
Sau3AI GATC 6 cut(s) 45, 481, 682, 754, 1074, 1146
Sau96I GGNCC 4 cut(s) 156, 332, 451, 1271
SchI GAGTC 5 cut(s) 1544, 1697, 1926, 2157, 2240
ScrFI CCNGG 6 cut(s) 356, 1281, 1326, 1862, 2062, 2217
SduI GDGCHC 4 cut(s) 672, 744, 1300, 1989
SfaNI GCATC 1 cut(s) 1776
SfcI CTRYAG 3 cut(s) 400, 723, 1590
SinI GGWCC 2 cut(s) 156, 451
SmlI CTYRAG 1 cut(s) 2018
SmoI CTYRAG 1 cut(s) 2018
SphI GCATGC 1 cut(s) 511
SsiI CCGC 4 cut(s) 33, 385, 644, 2315
SspMI CTAG 6 cut(s) 213, 941, 1049, 1088, 1914, 2228
SstI GAGCTC 2 cut(s) 672, 744
StyD4I CCNGG 6 cut(s) 354, 1279, 1324, 1860, 2060, 2215
StyI CCWWGG 3 cut(s) 454, 1291, 2364
TaiI ACGT 2 cut(s) 605, 1571
TaqI TCGA 9 cut(s) 273, 327, 484, 553, 609, 650, 891, 2031, 2193
TatI WGTACW 2 cut(s) 806, 2072
TfiI GAWTC 4 cut(s) 1003, 2078, 2246, 2327
TscAI CASTG 5 cut(s) 48, 267, 1000, 1619, 2346
TseFI GTSAC 3 cut(s) 1991, 2149, 2353
TseI GCWGC 2 cut(s) 25, 1111
Tsp45I GTSAC 3 cut(s) 1991, 2149, 2353
TspGWI ACGGA 3 cut(s) 1025, 1463, 2168
TspRI CASTG 5 cut(s) 48, 267, 1000, 1619, 2346
VneI GTGCAC 1 cut(s) 1985
VpaK11BI GGWCC 2 cut(s) 156, 451
VspI ATTAAT 2 cut(s) 624, 1442
XagI CCTNNNNNAGG 1 cut(s) 651
XapI RAATTY 5 cut(s) 497, 566, 575, 639, 1381
XceI RCATGY 2 cut(s) 511, 1699
XmiI GTMKAC 1 cut(s) 1353
XspI CTAG 6 cut(s) 213, 941, 1049, 1088, 1914, 2228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.