Rorug07G0144100

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
11369650 .. 11374750
5101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0144100.1

Sequence Viewer

Length: 2799 bp
ATGATTAAGCATCGCTGGAGGGAGCTAGCAAAGTCCTTTGGGGATCATGTTGATCCTGATAAAACTGAACAGTTGAAGAGGACTAAATCAGATATTGAAAATAATGTGACAAGGATCTTCAAGCTTATAAAAAGTGAAGACCTCGGAAAGAAAGATGGGAACCGAAGAGATTCAAAGAATGAGAGTGAACTTGTTGGACTCATTGAGAATTTCTACCAACAGTACCAGTCACTCTATGCATTGTATGATCATCTAATAGGAGAGTCGGGAAGAATAGTTCGGAGAAGAAAAGTGAGAACAGGCTCTTCTCCCTTGTCTCCCTCCAGCTCCGGCTCAGACTCTGAGTATTTTTCCTCAGACGAAATTGACAATAATAATGTCAAGCCGGAAAATCATGAGCATCAGAAGATGACAGACAGCGGTAATCATGACCTTAAAACCGAGAATTTGGGTCTGAAGCAACTAACGTTGTCTAGGAGTTCTAGTGAAGGAAAGGAGGCAATAAATACAGAATATTTGGCAGCACTGAAAAAAGTACATGCAGATATTACAAATGAAGATCGCAGGAATGAAGTGGATGAAAGAGTAAAGGAACTTTCAGCTCTTGTTGAGGCTCATGAACATCACGGGACTCAATCATCAGCTAGGGTGAAAGAGTTAGAGGCTCAGTTAGCTGGCTTCAAAACTGATTTGGAGTCATTGTGCAGCCAGAAAAGAGATTTGGAAGCATGGAAAGAAGACAGAGTTGCTGAAGCTAAACAGCTAGGAGATAAAAACATAGGTCTCCATGCCCGGATTTTGGAACTCGAGTTAGTTTTAAAAGAAAAAAATGATGAAATATCTGATCTCATGAAGAAACTCGAAAATGAGAGTAGTTCAACACCGAAAGTTGCATATTTGATGGCACAGACAAGCAATCTGCAACTGGAAGTTGAGTCATTGCACGCTCAAAAAGGGGAAATGGAAGAAAGGATGGCTACTGTGAAAACTGAATCATCGGATCAAGTTGAGGAACTCACAGATAAGATCAATGCAATGAAGCAGGAATTAGAGACCCTGCGCTGGGAGAGAGCCGAAACAGGAGTGCAACTAGATAGGAAGAACAAAGAAATCTCCCAAGAACTGCACCAGATAGAAACTTTGAAGGAGGAACTGAAAAGAAAAGATGTAGCTGAAAAGAAAATATCGGAAGAAAGACAACGTTTTCTTAAGCAGGTGAAGGATATGGAATTAGAAGTGGACTCTCTACGCAGCCACAAAAAGAATCTGGAAAAGCAAAAAAGAAGTAAAATGCATGAGGCGGATAAGCTGAGAAGGGAAAGTGAGGGTCTGCGTGCTAAGATAGTCAACTTGGAGAAAACTTTGTCCCAGAGAGGGGAGGAGGTTTCTGCTCTTCGTAAAGAATGCGAGGATGGAAAGAATGAAGCTTCTACTCAACTTATGACTTTGACGACAGAAGTCAGCAGTTTGAAACAGGAGTTGGATTCCGTAAAGCTCCAGAAGATCCAGCTAGAATTGCAGTGTGAGAAAGAGAACAAGGAATGGTCGAAAAGACTAACTGAGATGGAAAATGAAACCGAAAAGAAAATGCTGGAAGAAAGACAGCGGTTTCTTGATCAGATAAAGGACATGGAAAAGGAAGTGGACTCTCTATGCAGCCAAAAGATCAATTTGAAAAATCAGATAACAAGTAAAATCCATGACACTGATATGCTGCAGCGTGAAAATGGGGGTCTAAATGCTAGAATTTTTGAGTTGGAGAAGACATTGACCGAGAGAGGGGATGAGGTTGAAGCTCTTCGTAGAGAATGCGAGGATGGACACAAGGAAGCTGCTAATAAACTTATGGCCTTAACAACACAGGTAAGCGATTTGAAACAGGAGTTGGATACCTTGACCAAGAAAAGCCAGTTGGAGTTACAGAGTGAGACAGAGAACAAAGAATATAAGGAAAGACAGACCGAGATGGAAGGAAAGATTGCTGATCAGCAGAGAGTTATTAAGGAACAGGAAGATACTATCAAGAAGATCACTAAGGAGTATAAAAACGCTAAAATGTGGTTTCCTGAATCCAAGCTAAATCTGCAGCTTGCCGAAAGAAAGATGGAAGAATTGGCAAAAAAGCACCGCATACAGTTTGAAGACAATGTCCGGCTCTTATACCAGAGAATCCGGGTGGCAGAACATATACACAATGACACAAAAGAGAGCTACTGGAGAATGAAAGAGGAGTATGAGAAAGAAACTAGAGAGATCAGAGAAAAGCTTGAATTTTACGAAAATCCACTCAAAAAGATGAAGGAGGTATCCGAGACAGCAAGGAGAACTCTGAACCGATTGGATAGGGTGGCATGTAGGTTTGATAAGGAGCACAGCAACTTTTTGAACAACATATCCAGAATGTCTGATGAGGTTCAGGTTGCAAAAAGTTGGGTTACCGGGGCAACCAACGAGATCAAACGGCTGAAGCGTCATGCCGATTGCTTGGCTGCTCAGCTGGATGAAAAGGAAGAACAGGAGAGTTTGTTAAGGGAGAAAGTTTGGAAGTTAGAGGCAACGGCAAGCAAGGAAGCCGGAGAGAAGCTGAACTTAATGAAAAACTTTAGCCAACTCGAGAAGCAGGTAGCGAAAATGGAGAAGACAATAAAGGAGAAGGATGAAGACTTGTTGAGTCTTGGTGAGGAGAAGAGGGAGGTCATAAGGCAGCTATGTATCTTAATTGACCATCACCGAATCCGCTATGATGATCTTAAGGAAGTGATAACAAAGAGGCCTGGTAGATCCAGTACTGTAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

932

Amino Acids

109.06

Weight (kDa)

6.08

Isoelectric Point (pI)

50.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 13 - 83 1e-13 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 128
AarI CACCTGC 1 cut(s) 1204
Acc36I ACCTGC 2 cut(s) 1204, 2611
AciI CCGC 5 cut(s) 420, 1301, 1606, 2128, 2737
AclI AACGTT 2 cut(s) 467, 1201
AclWI GGATC 6 cut(s) 47, 51, 122, 1008, 1498, 2775
AcsI RAATTY 4 cut(s) 208, 445, 1746, 2270
AcuI CTGAAG 3 cut(s) 476, 771, 2486
AfaI GTAC 3 cut(s) 224, 537, 2788
AfiI CCNNNNNNNGG 6 cut(s) 799, 1062, 1063, 1374, 1375, 1779
AflII CTTAAG 2 cut(s) 1208, 2750
AjnI CCWGG 1 cut(s) 2773
AjuI GAANNNNNNNTTGG 8 cut(s) 704, 736, 1463, 1495, 1868, 1895, 1900, 1927
AloI GAACNNNNNNTCC 4 cut(s) 261, 293, 2378, 2410
Alw21I GWGCWC 1 cut(s) 2373
Alw26I GTCTC 5 cut(s) 321, 788, 1046, 1922, 2306
AlwI GGATC 6 cut(s) 47, 51, 122, 1008, 1498, 2775
AlwNI CAGNNNCTG 1 cut(s) 341
Ama87I CYCGRG 2 cut(s) 806, 2612
AoxI GGCC 2 cut(s) 1848, 2771
ApoI RAATTY 4 cut(s) 208, 445, 1746, 2270
Asp700I GAANNNNTTC 2 cut(s) 169, 1797
AspLEI GCGC 1 cut(s) 1062
AsuC2I CCSGG 3 cut(s) 793, 2174, 2440
AsuHPI GGTGA 4 cut(s) 661, 1228, 2690, 2720
AsuNHI GCTAGC 1 cut(s) 25
AvaI CYCGRG 2 cut(s) 806, 2612
BbsI GAAGAC 6 cut(s) 144, 744, 1769, 2148, 2645, 2667
Bbv12I GWGCWC 1 cut(s) 2373
BccI CCATC 9 cut(s) 149, 895, 967, 1406, 1558, 1811, 1960, 2098, 2733
BceAI ACGGC 2 cut(s) 2477, 2574
BciT130I CCWGG 1 cut(s) 2775
BciVI GTATCC 2 cut(s) 1882, 2317
BclI TGATCA 3 cut(s) 247, 1615, 1984
BcnI CCSGG 3 cut(s) 793, 2174, 2440
BcoDI GTCTC 5 cut(s) 321, 788, 1046, 1922, 2306
BfaI CTAG 9 cut(s) 26, 474, 483, 645, 764, 1091, 1511, 1743, 2247
BfmI CTRYAG 2 cut(s) 1715, 2084
BfrI CTTAAG 2 cut(s) 1208, 2750
BfuAI ACCTGC 2 cut(s) 1204, 2611
BfuI GTATCC 2 cut(s) 1882, 2317
BlpI GCTNAGC 1 cut(s) 2493
BmcAI AGTACT 1 cut(s) 2788
Bme1390I CCNGG 4 cut(s) 793, 2174, 2440, 2775
BmeT110I CYCGRG 2 cut(s) 806, 2612
BmiI GGNNCC 1 cut(s) 161
BmrFI CCNGG 4 cut(s) 793, 2174, 2440, 2775
BmsI GCATC 2 cut(s) 19, 409
BmtI GCTAGC 1 cut(s) 29
BoxI GACNNNNGTC 1 cut(s) 1457
BpiI GAAGAC 6 cut(s) 144, 744, 1769, 2148, 2645, 2667
BpmI CTGGAG 4 cut(s) 37, 307, 1481, 2236
Bpu1102I GCTNAGC 1 cut(s) 2493
BpuMI CCSGG 3 cut(s) 793, 2174, 2440
BsaI GGTCTC 2 cut(s) 788, 1046
BsaJI CCNNGG 2 cut(s) 142, 2439
BsaXI ACNNNNNCTCC 6 cut(s) 469, 499, 686, 716, 2510, 2540
Bsc4I CCNNNNNNNGG 6 cut(s) 799, 1062, 1063, 1374, 1375, 1779
Bse1I ACTGG 5 cut(s) 226, 930, 1909, 2219, 2784
Bse3DI GCAATG 2 cut(s) 938, 1041
BseBI CCWGG 1 cut(s) 2775
BseDI CCNNGG 2 cut(s) 142, 2439
BseGI GGATG 7 cut(s) 583, 978, 1417, 1789, 1822, 2506, 2662
BseLI CCNNNNNNNGG 6 cut(s) 799, 1062, 1063, 1374, 1375, 1779
BseMI GCAATG 2 cut(s) 938, 1041
BseMII CTCAG 7 cut(s) 333, 348, 369, 680, 1301, 1551, 2507
BseNI ACTGG 5 cut(s) 226, 930, 1909, 2219, 2784
BseRI GAGGAG 3 cut(s) 1394, 2243, 2696
BseYI CCCAGC 1 cut(s) 1062
BsgI GTGCAG 2 cut(s) 724, 1109
BshFI GGCC 2 cut(s) 1850, 2773
BsiHKAI GWGCWC 1 cut(s) 2373
BsiHKCI CYCGRG 2 cut(s) 806, 2612
BsiSI CCGG 7 cut(s) 330, 386, 793, 2152, 2173, 2439, 2574
BslFI GGGAC 2 cut(s) 643, 1351
BslI CCNNNNNNNGG 6 cut(s) 799, 1062, 1063, 1374, 1375, 1779
BsmAI GTCTC 5 cut(s) 321, 788, 1046, 1922, 2306
BsmFI GGGAC 2 cut(s) 643, 1351
BsmI GAATGC 2 cut(s) 1409, 1814
BsnI GGCC 2 cut(s) 1850, 2773
Bso31I GGTCTC 2 cut(s) 788, 1046
BsoBI CYCGRG 2 cut(s) 806, 2612
Bsp1286I GDGCHC 1 cut(s) 2373
Bsp1720I GCTNAGC 1 cut(s) 2493
BspACI CCGC 5 cut(s) 420, 1301, 1606, 2128, 2737
BspANI GGCC 2 cut(s) 1850, 2773
BspCNI CTCAG 7 cut(s) 334, 347, 368, 679, 1302, 1552, 2506
BspHI TCATGA 4 cut(s) 394, 427, 616, 849
BspLI GGNNCC 1 cut(s) 161
BspMAI CTGCAG 2 cut(s) 1719, 2088
BspMI ACCTGC 2 cut(s) 1204, 2611
BspOI GCTAGC 1 cut(s) 29
BspPI GGATC 6 cut(s) 47, 51, 122, 1008, 1498, 2775
BspQI GCTCTTC 3 cut(s) 310, 1398, 1803
BspTI CTTAAG 2 cut(s) 1208, 2750
BspTNI GGTCTC 2 cut(s) 788, 1046
BsrDI GCAATG 2 cut(s) 938, 1041
BsrI ACTGG 5 cut(s) 226, 930, 1909, 2219, 2784
BssECI CCNNGG 2 cut(s) 142, 2439
Bst2UI CCWGG 1 cut(s) 2775
Bst4CI ACNGT 5 cut(s) 72, 222, 982, 2136, 2791
Bst6I CTCTTC 6 cut(s) 71, 160, 310, 1398, 1803, 2681
BstAFI CTTAAG 2 cut(s) 1208, 2750
BstC8I GCNNGC 6 cut(s) 27, 676, 945, 1335, 2091, 2563
BstDEI CTNAG 9 cut(s) 334, 342, 355, 666, 1310, 1338, 1560, 2034, 2493
BstEII GGTNACC 1 cut(s) 2434
BstF5I GGATG 7 cut(s) 583, 978, 1417, 1789, 1822, 2506, 2662
BstHHI GCGC 1 cut(s) 1062
BstMAI GTCTC 5 cut(s) 321, 788, 1046, 1922, 2306
BstMWI GCNNNNNNNGC 3 cut(s) 671, 1516, 2083
BstNI CCWGG 1 cut(s) 2775
BstNSI RCATGY 2 cut(s) 542, 2355
BstPAI GACNNNNGTC 1 cut(s) 1457
BstPI GGTNACC 1 cut(s) 2434
BstSCI CCNGG 4 cut(s) 791, 2172, 2438, 2773
BstSFI CTRYAG 2 cut(s) 1715, 2084
BstV2I GAAGAC 6 cut(s) 144, 744, 1769, 2148, 2645, 2667
BstX2I RGATCY 3 cut(s) 114, 1503, 2780
BstYI RGATCY 3 cut(s) 114, 1503, 2780
BsuI GTATCC 2 cut(s) 1882, 2317
BsuRI GGCC 2 cut(s) 1850, 2773
BtsCI GGATG 7 cut(s) 583, 978, 1417, 1789, 1822, 2506, 2662
BtsI GCAGTG 1 cut(s) 1526
BtsIMutI CAGTG 3 cut(s) 524, 1526, 1704
BveI ACCTGC 2 cut(s) 1204, 2611
Cac8I GCNNGC 6 cut(s) 27, 676, 945, 1335, 2091, 2563
CaiI CAGNNNCTG 1 cut(s) 341
CciI TCATGA 4 cut(s) 394, 427, 616, 849
CfoI GCGC 1 cut(s) 1062
CseI GACGC 1 cut(s) 2459
Csp6I GTAC 3 cut(s) 223, 536, 2787
CviQI GTAC 3 cut(s) 223, 536, 2787
DdeI CTNAG 9 cut(s) 334, 342, 355, 666, 1310, 1338, 1560, 2034, 2493
DraI TTTAAA 1 cut(s) 819
Eam1104I CTCTTC 6 cut(s) 71, 160, 310, 1398, 1803, 2681
EarI CTCTTC 6 cut(s) 71, 160, 310, 1398, 1803, 2681
EciI GGCGGA 1 cut(s) 1316
Eco147I AGGCCT 1 cut(s) 2773
Eco31I GGTCTC 2 cut(s) 788, 1046
Eco57I CTGAAG 3 cut(s) 476, 771, 2486
Eco88I CYCGRG 2 cut(s) 806, 2612
Eco91I GGTNACC 1 cut(s) 2434
EcoO65I GGTNACC 1 cut(s) 2434
EcoRII CCWGG 1 cut(s) 2773
EcoT22I ATGCAT 2 cut(s) 241, 1296
FalI AAGNNNNNCTT 2 cut(s) 2573, 2605
FaqI GGGAC 2 cut(s) 643, 1351
FbaI TGATCA 3 cut(s) 247, 1615, 1984
FokI GGATG 7 cut(s) 590, 985, 1424, 1796, 1829, 2513, 2669
FspBI CTAG 9 cut(s) 26, 474, 483, 645, 764, 1091, 1511, 1743, 2247
GlaI GCGC 1 cut(s) 1061
GsaI CCCAGC 1 cut(s) 1066
GsuI CTGGAG 4 cut(s) 37, 307, 1481, 2236
HaeIII GGCC 2 cut(s) 1850, 2773
HapII CCGG 7 cut(s) 330, 386, 793, 2152, 2173, 2439, 2574
HgaI GACGC 1 cut(s) 2459
HhaI GCGC 1 cut(s) 1062
Hin6I GCGC 1 cut(s) 1060
HinP1I GCGC 1 cut(s) 1060
HincII GTYRAC 1 cut(s) 1348
HindII GTYRAC 1 cut(s) 1348
HindIII AAGCTT 3 cut(s) 122, 1425, 2264
HpaII CCGG 7 cut(s) 330, 386, 793, 2152, 2173, 2439, 2574
HphI GGTGA 4 cut(s) 661, 1228, 2690, 2720
Hpy166II GTNNAC 4 cut(s) 188, 1240, 1348, 1645
Hpy8I GTNNAC 4 cut(s) 188, 1240, 1348, 1645
HpyAV CCTTC 7 cut(s) 482, 1138, 1213, 1308, 1964, 2293, 2647
HpyCH4III ACNGT 5 cut(s) 72, 222, 982, 2136, 2791
HpyCH4IV ACGT 2 cut(s) 467, 1201
HpyF10VI GCNNNNNNNGC 3 cut(s) 671, 1516, 2083
HpyF3I CTNAG 9 cut(s) 334, 342, 355, 666, 1310, 1338, 1560, 2034, 2493
HpySE526I ACGT 2 cut(s) 467, 1201
HspAI GCGC 1 cut(s) 1060
Ksp22I TGATCA 3 cut(s) 247, 1615, 1984
LguI GCTCTTC 3 cut(s) 310, 1398, 1803
LmnI GCTCC 4 cut(s) 22, 332, 1500, 2368
LweI GCATC 2 cut(s) 19, 409
MaeI CTAG 9 cut(s) 26, 474, 483, 645, 764, 1091, 1511, 1743, 2247
MaeII ACGT 2 cut(s) 467, 1201
MaeIII GTNAC 4 cut(s) 106, 228, 1917, 2434
MflI RGATCY 3 cut(s) 114, 1503, 2780
MhlI GDGCHC 1 cut(s) 2373
MlyI GAGTC 9 cut(s) 192, 272, 332, 625, 704, 944, 1235, 1640, 2680
MmeI TCCRAC 5 cut(s) 175, 1461, 1737, 1866, 1893
Mph1103I ATGCAT 2 cut(s) 241, 1296
MroXI GAANNNNTTC 2 cut(s) 169, 1797
MslI CAYNNNNRTG 1 cut(s) 1709
MspA1I CMGCKG 3 cut(s) 420, 1606, 2497
MspCI CTTAAG 2 cut(s) 1208, 2750
MspI CCGG 7 cut(s) 330, 386, 793, 2152, 2173, 2439, 2574
MspR9I CCNGG 4 cut(s) 793, 2174, 2440, 2775
Mva1269I GAATGC 2 cut(s) 1409, 1814
MvaI CCWGG 1 cut(s) 2775
MwoI GCNNNNNNNGC 3 cut(s) 671, 1516, 2083
NciI CCSGG 3 cut(s) 793, 2174, 2440
NheI GCTAGC 1 cut(s) 25
NlaIV GGNNCC 1 cut(s) 161
NmuCI GTSAC 2 cut(s) 106, 228
NsiI ATGCAT 2 cut(s) 241, 1296
NspI RCATGY 2 cut(s) 542, 2355
PaeR7I CTCGAG 2 cut(s) 806, 2612
PagI TCATGA 4 cut(s) 394, 427, 616, 849
PaqCI CACCTGC 1 cut(s) 1204
PceI AGGCCT 1 cut(s) 2773
PciSI GCTCTTC 3 cut(s) 310, 1398, 1803
PcsI WCGNNNNNNNCGW 1 cut(s) 2467
PctI GAATGC 2 cut(s) 1409, 1814
PdmI GAANNNNTTC 2 cut(s) 169, 1797
PfeI GAWTC 7 cut(s) 170, 992, 1264, 1484, 2069, 2169, 2733
PflFI GACNNNGTC 1 cut(s) 2147
PleI GAGTC 9 cut(s) 192, 271, 332, 625, 703, 943, 1235, 1640, 2679
PpsI GAGTC 9 cut(s) 192, 271, 332, 625, 703, 943, 1235, 1640, 2679
PshAI GACNNNNGTC 1 cut(s) 1457
PsiI TTATAA 1 cut(s) 128
Psp1406I AACGTT 2 cut(s) 467, 1201
Psp6I CCWGG 1 cut(s) 2773
PspEI GGTNACC 1 cut(s) 2434
PspFI CCCAGC 1 cut(s) 1062
PspGI CCWGG 1 cut(s) 2773
PspN4I GGNNCC 1 cut(s) 161
PspXI VCTCGAGB 1 cut(s) 806
PstI CTGCAG 2 cut(s) 1719, 2088
PstNI CAGNNNCTG 1 cut(s) 341
PsuI RGATCY 3 cut(s) 114, 1503, 2780
PsyI GACNNNGTC 1 cut(s) 2147
PvuII CAGCTG 1 cut(s) 2497
RsaI GTAC 3 cut(s) 224, 537, 2788
RsaNI GTAC 3 cut(s) 223, 536, 2787
RseI CAYNNNNRTG 1 cut(s) 1709
SapI GCTCTTC 3 cut(s) 310, 1398, 1803
ScaI AGTACT 1 cut(s) 2788
SchI GAGTC 9 cut(s) 192, 272, 332, 625, 704, 944, 1235, 1640, 2680
ScrFI CCNGG 4 cut(s) 793, 2174, 2440, 2775
SduI GDGCHC 1 cut(s) 2373
SfaNI GCATC 2 cut(s) 19, 409
SfcI CTRYAG 2 cut(s) 1715, 2084
Sfr274I CTCGAG 2 cut(s) 806, 2612
SlaI CTCGAG 2 cut(s) 806, 2612
SmiMI CAYNNNNRTG 1 cut(s) 1709
SmlI CTYRAG 4 cut(s) 806, 1208, 2612, 2750
SmoI CTYRAG 4 cut(s) 806, 1208, 2612, 2750
SseBI AGGCCT 1 cut(s) 2773
SsiI CCGC 5 cut(s) 420, 1301, 1606, 2128, 2737
SspI AATATT 1 cut(s) 515
SspMI CTAG 9 cut(s) 26, 474, 483, 645, 764, 1091, 1511, 1743, 2247
StuI AGGCCT 1 cut(s) 2773
StyD4I CCNGG 4 cut(s) 791, 2172, 2438, 2773
TaaI ACNGT 5 cut(s) 72, 222, 982, 2136, 2791
TaiI ACGT 2 cut(s) 470, 1204
TaqI TCGA 4 cut(s) 807, 861, 1547, 2613
TaqII GACCGA 2 cut(s) 1787, 1976
TatI WGTACW 2 cut(s) 535, 2786
TfiI GAWTC 7 cut(s) 170, 992, 1264, 1484, 2069, 2169, 2733
TscAI CASTG 3 cut(s) 531, 1526, 1711
TseFI GTSAC 2 cut(s) 106, 228
Tsp45I GTSAC 2 cut(s) 106, 228
TspGWI ACGGA 1 cut(s) 1477
TspRI CASTG 3 cut(s) 531, 1526, 1711
Tth111I GACNNNGTC 1 cut(s) 2147
Vha464I CTTAAG 2 cut(s) 1208, 2750
XapI RAATTY 4 cut(s) 208, 445, 1746, 2270
XceI RCATGY 2 cut(s) 542, 2355
XhoI CTCGAG 2 cut(s) 806, 2612
XmnI GAANNNNTTC 2 cut(s) 169, 1797
XspI CTAG 9 cut(s) 26, 474, 483, 645, 764, 1091, 1511, 1743, 2247
ZrmI AGTACT 1 cut(s) 2788
Zsp2I ATGCAT 2 cut(s) 241, 1296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.