Rmu_sc0003006.1_g000017

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003006.1
Physical Location & Seq
Forward (+)
56041 .. 60377
4337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003006.1_g000017.1.cds

Sequence Viewer

Length: 3615 bp
atgagatctttagtgtttgaaaaagtaagccctctagtttactgccttttcttgtatgttcacctactttcatcacaaaactactttcgacattttgcttctgctggttcaactattgaagcagaggctcttctcaaatggaaagccagctttctaaatcaaacctcccataataaccagctgaaggattggatttaccttcccaagactactgatacgaatgccaccaattcttccaacaaccccaaagaaaacgaaagcccatgcaattggactggtatttcatgcaatgctgctggaaatgtcaccaacataaccattgccagttcccgtatacaaggtgtgctacatgaattttcattctcatctttcccttatctcgaatatcttgacctcagcatcaataaactctttgatatcatcccacctcaaatcagttccctctccaaactcctccatcttgacctctccagtaaccagttctccagaagaattccaccagaaattggtcttctaagaaatctcaggttgctatatctttatagaaatgatctttatgatgttattcctccttcgatagggaacctgaaatctttggtggatctagagttgagcaccaatcaacttagtggttcaatttcgacaacattgagtgatctgaccaaccttaccactctctatctcttttcaaataatctttccgggaccattccaaaagagctaggaaacttgaaatctttggtggatctagagttgagcaccaatcaactcagtggttctattccaacaaaattaggtcatctgaccgaccttaccactctttatctcgattcaaatagcctttctggccccattccaaaagagttagggaacttgaaatctttggtgaatctatcattgagcacgaatcacctctatggttcaattccgacaacattgggtgatctgaccaatcttaccactctttatctctattcaaatagcctttctggcaccattacaaaagagttagggaacctgaaatctttggtggatctaaacttgagcaccaatcaactcagtggttctattccaacaacattgggtgatctgaccgaccttaccactctgtatctccattcaaatagcctttctggcaccattccaaaagagttagggaacctgaaatctttggcggatctatggttgtacaacaatcaagtcagtggttcaattccgacaacactgggtgatctgaccaaccttaccactctctatctctattcaaataatcttttcgggaccattccaaaagagttaggaaacctgaaatctttggtgaatctatccttgagcaccaatcacctctatggttcaattccgacaacattgggtgatctgaccaaccttacatttttctatctctcttcaaataatctttccgggaccattccaaaagagttaggaaacctgaaatcgttggtgaggctatccttgagcatcaatccactcagtggttcaattccgacaacattgggtgacttgccaaacttgaaaatattaaggcttcgtgacaaccaactttccggccccattcctcaagagataggaaatatccaaaagttgataagcgtgcaattaaatggaaaccatttttcaggtcacttgccccaaaacatttgtcgaggtggatcacttacatacttttcagcattttccaatcacctgagtggtccaatccccataagcttgaaaacatgtactagcttactcagagttcgtcttgaacagaaccaattgacaggtaacatatctgcagcctttggtgtttaccctagtctcaattttatagatttgagcaacaatcaactaaatggtgaaatcttaccaaattgggtattgtgcccaaatttaacaaccatacgaatagctggaaacaaacttactggttctataccagctgtgattggaaatgcaacccaaattcatgtgctcgatctttcttcaaatggtttagtcgggacaattccaaaggagtttgggggattatcctcaatgattgagttgaagttggatgacaatcaactttcaggacgtgtcccttcagagttcaagtcattgactaatctagaatatcttgatctctcagcaaacaaattcaatgattcaattccaagctttgtaggtgattttctcaaattaaattacttgaatttgagcaacaaccagttcagtcaagtaatttcatttcagttggggaagctaattcagttatcccaactagatttgagttttaacacacttgaaggtcagataccatcagatattagtaatatgcacagtctggaaatacttaataaatcccacaacaatctttctggttccattcctacaagtatggaagacatgcatgggctaacgtatgctgacatatcctacaatcacttggaaggtccacttcccaacatcaaagcatttcaagctgcccctcgagaagcattgcaagggaacaagggcttgtgtggcaacacaacatatttgcgaccttgcaataaagaaagccgaaagaaggaccataaactcatacttctgatgacctttcttgttcttggagcacttgcacttcaagcctttatatttgcatttggagtaaaaagaaaaaagaagcatcaacatgtaggagaaaaagccagagatgaagaaatttctttttcgatattacactttgatggaaagacgttggaagggaaacagggaagcgtctacaaagcaactttgtcaaatgctaacacagtagctgtaaagaaactccatctgttatgcactgatgacaagaatcttcaaaaagaattcttgaatgaaatcagggcactaactgagatgcgtcaccgaaatattgtgaggctttatggtttctgttcacacaggcgacactcatttttggtttatgaatatcttgaaaaaggtagtttggctacagtgttgagcaaagatgaggaaactaaagaactgggatggagtaaaagggtgaatatcatgaaaggtgtagctcatgccatgtgttacatgcaccacgattgcttgtcaccaattgtgcaccgggacatatcaagcaagaacattttgctggatgatgaatatgaggcatgtgtttcagattttggcattgcgaagttcttgaaccaagactcaaataattggactgcccttgcaggcacgtacggatatattgcaccagagcttgcttatacaatggaagtaaatgagaagtgtgatgtttatagctttggagtggtggcattggagatacttataggaagacatccgggagatcttctctcatctctatcatcggagtcgtcgtcatcatcaactgcgttaccagcccatccaatgccagttgtggatgttttggaccaacgcatttcccctccgaaacatcaagttgcaggggaagtgctctcgcttatgaagatagcatttgcatgcctgaattccggtcctcgatctcgtccaacaatgaaacaagtatctcaacaatttgaaagtcatcagaggctgcatttgtcaaagccattatctatgataacactaggtgaattgcttgctctcgatggtttgtgtttggctatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1204

Amino Acids

132.47

Weight (kDa)

6.93

Isoelectric Point (pI)

29.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 992, 1136
AccB7I CCANNNNNTGG 2 cut(s) 506, 1493
AccI GTMKAC 2 cut(s) 334, 2742
AciI CCGC 1 cut(s) 1175
AclWI GGATC 5 cut(s) 609, 753, 1041, 1185, 1678
AcsI RAATTY 9 cut(s) 353, 492, 1888, 1962, 2135, 2191, 2682, 2828, 3472
AcuI CTGAAG 2 cut(s) 203, 2067
AdeI CACNNNGTG 3 cut(s) 1229, 1493, 3575
AfaI GTAC 3 cut(s) 1190, 1741, 3200
AfiI CCNNNNNNNGG 5 cut(s) 184, 506, 578, 1493, 2548
AflIII ACRYGT 3 cut(s) 1736, 2074, 2653
AjiI CACGTC 1 cut(s) 2075
AleI CACNNNNGTG 1 cut(s) 1707
Alw21I GWGCWC 9 cut(s) 617, 761, 905, 1049, 1337, 1974, 2596, 3078, 3441
Alw26I GTCTC 1 cut(s) 1823
Alw44I GTGCAC 1 cut(s) 3074
AlwI GGATC 5 cut(s) 609, 753, 1041, 1185, 1678
AlwNI CAGNNNCTG 2 cut(s) 2777, 3538
Ama87I CYCGRG 1 cut(s) 2469
AoxI GGCC 2 cut(s) 847, 1567
ApaLI GTGCAC 1 cut(s) 3074
ApeKI GCWGC 4 cut(s) 293, 1796, 2462, 3538
ApoI RAATTY 9 cut(s) 353, 492, 1888, 1962, 2135, 2191, 2682, 2828, 3472
ArsI GACNNNNNNTTYG 2 cut(s) 1645, 1677
AsuC2I CCSGG 4 cut(s) 703, 1423, 3080, 3306
AvaI CYCGRG 1 cut(s) 2469
AvaII GGWCC 8 cut(s) 705, 1281, 1425, 1712, 2432, 2551, 3394, 3479
BaeGI GKGCMC 3 cut(s) 1886, 2851, 3078
BanI GGYRCC 2 cut(s) 992, 1136
BarI GAAGNNNNNNTAC 2 cut(s) 2277, 2309
BbsI GAAGAC 3 cut(s) 503, 2388, 3304
Bbv12I GWGCWC 9 cut(s) 617, 761, 905, 1049, 1337, 1974, 2596, 3078, 3441
BbvCI CCTCAGC 1 cut(s) 395
BbvI GCAGC 4 cut(s) 280, 1808, 2449, 3525
BccI CCATC 7 cut(s) 465, 2305, 2702, 2799, 2988, 3375, 3587
BcnI CCSGG 4 cut(s) 703, 1423, 3080, 3306
BcoDI GTCTC 1 cut(s) 1823
BfaI CTAG 9 cut(s) 35, 605, 722, 749, 1743, 1815, 2108, 2261, 3572
BfmI CTRYAG 2 cut(s) 1794, 2955
BglI GCCNNNNNGGC 3 cut(s) 846, 990, 1134
BglII AGATCT 2 cut(s) 5, 3310
BisI GCNGC 4 cut(s) 294, 1797, 2463, 3539
BlsI GCNGC 4 cut(s) 295, 1798, 2464, 3540
Bme1390I CCNGG 4 cut(s) 703, 1423, 3080, 3306
Bme18I GGWCC 8 cut(s) 705, 1281, 1425, 1712, 2432, 2551, 3394, 3479
BmeT110I CYCGRG 1 cut(s) 2469
BmgBI CACGTC 1 cut(s) 2075
BmrFI CCNGG 4 cut(s) 703, 1423, 3080, 3306
BmrI ACTGGG 2 cut(s) 1235, 2999
BmsI GCATC 4 cut(s) 408, 1488, 2656, 2850
BmuI ACTGGG 2 cut(s) 1235, 2999
BpiI GAAGAC 3 cut(s) 503, 2388, 3304
BplI GAGNNNNNCTC 2 cut(s) 3300, 3332
BpmI CTGGAG 2 cut(s) 454, 469
Bpu10I CCTNAGC 1 cut(s) 395
BpuEI CTTGAG 4 cut(s) 1063, 1351, 1495, 1563
BpuMI CCSGG 4 cut(s) 703, 1423, 3080, 3306
BsaAI YACGTR 1 cut(s) 3198
BsaBI GATNNNNATC 1 cut(s) 2058
BsaWI WCCGGW 1 cut(s) 3476
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 3326, 3356
Bsc4I CCNNNNNNNGG 5 cut(s) 184, 506, 578, 1493, 2548
Bse1I ACTGG 9 cut(s) 280, 324, 471, 478, 1230, 1930, 2206, 2994, 3377
Bse3DI GCAATG 4 cut(s) 295, 318, 2477, 3144
Bse8I GATNNNNATC 1 cut(s) 2058
BseGI GGATG 7 cut(s) 420, 2059, 2999, 3115, 3301, 3367, 3391
BseJI GATNNNNATC 1 cut(s) 2058
BseLI CCNNNNNNNGG 5 cut(s) 184, 506, 578, 1493, 2548
BseMI GCAATG 4 cut(s) 295, 318, 2477, 3144
BseMII CTCAG 9 cut(s) 409, 538, 784, 1072, 1504, 1697, 1765, 2139, 2847
BseNI ACTGG 9 cut(s) 280, 324, 471, 478, 1230, 1930, 2206, 2994, 3377
BseRI GAGGAG 1 cut(s) 443
BseSI GKGCMC 3 cut(s) 1886, 2851, 3078
BseXI GCAGC 4 cut(s) 280, 1808, 2449, 3525
BshFI GGCC 2 cut(s) 849, 1569
BshNI GGYRCC 2 cut(s) 992, 1136
BsiHKAI GWGCWC 9 cut(s) 617, 761, 905, 1049, 1337, 1974, 2596, 3078, 3441
BsiHKCI CYCGRG 1 cut(s) 2469
BsiSI CCGG 6 cut(s) 702, 1422, 1566, 3079, 3305, 3477
BsiWI CGTACG 1 cut(s) 3198
BslFI GGGAC 6 cut(s) 718, 1294, 1438, 2014, 2063, 3095
BslI CCNNNNNNNGG 5 cut(s) 184, 506, 578, 1493, 2548
BsmAI GTCTC 1 cut(s) 1823
BsmFI GGGAC 6 cut(s) 718, 1294, 1438, 2014, 2063, 3095
BsmI GAATGC 1 cut(s) 226
BsnI GGCC 2 cut(s) 849, 1569
BsoBI CYCGRG 1 cut(s) 2469
Bsp1407I TGTACA 1 cut(s) 1188
BspACI CCGC 1 cut(s) 1175
BspANI GGCC 2 cut(s) 849, 1569
BspCNI CTCAG 9 cut(s) 408, 537, 783, 1071, 1503, 1698, 1764, 2138, 2848
BspHI TCATGA 1 cut(s) 3015
BspMAI CTGCAG 1 cut(s) 1798
BspPI GGATC 5 cut(s) 609, 753, 1041, 1185, 1678
BspQI GCTCTTC 1 cut(s) 135
BspT107I GGYRCC 2 cut(s) 992, 1136
BsrDI GCAATG 4 cut(s) 295, 318, 2477, 3144
BsrGI TGTACA 1 cut(s) 1188
BsrI ACTGG 9 cut(s) 280, 324, 471, 478, 1230, 1930, 2206, 2994, 3377
BssNAI GTATAC 1 cut(s) 335
Bst1107I GTATAC 1 cut(s) 335
Bst4CI ACNGT 3 cut(s) 2321, 2773, 2959
Bst6I CTCTTC 2 cut(s) 135, 1411
BstAUI TGTACA 1 cut(s) 1188
BstBAI YACGTR 1 cut(s) 3198
BstC8I GCNNGC 6 cut(s) 148, 1613, 3193, 3222, 3466, 3585
BstENI CCTNNNNNAGG 1 cut(s) 576
BstF5I GGATG 7 cut(s) 420, 2059, 2999, 3115, 3301, 3367, 3391
BstMAI GTCTC 1 cut(s) 1823
BstMWI GCNNNNNNNGC 7 cut(s) 846, 990, 1134, 2459, 2502, 2606, 3362
BstNSI RCATGY 6 cut(s) 1740, 2389, 2657, 3049, 3129, 3468
BstSCI CCNGG 4 cut(s) 701, 1421, 3078, 3304
BstSFI CTRYAG 2 cut(s) 1794, 2955
BstSLI GKGCMC 3 cut(s) 1886, 2851, 3078
BstV1I GCAGC 4 cut(s) 280, 1808, 2449, 3525
BstV2I GAAGAC 3 cut(s) 503, 2388, 3304
BstX2I RGATCY 6 cut(s) 5, 601, 745, 1033, 1177, 3310
BstXI CCANNNNNNTGG 1 cut(s) 270
BstYI RGATCY 6 cut(s) 5, 601, 745, 1033, 1177, 3310
BstZ17I GTATAC 1 cut(s) 335
BsuRI GGCC 2 cut(s) 849, 1569
BtrI CACGTC 1 cut(s) 2075
BtsCI GGATG 7 cut(s) 420, 2059, 2999, 3115, 3301, 3367, 3391
BtsIMutI CAGTG 7 cut(s) 778, 1066, 1210, 1223, 1498, 2802, 2964
Cac8I GCNNGC 6 cut(s) 148, 1613, 3193, 3222, 3466, 3585
CaiI CAGNNNCTG 2 cut(s) 2777, 3538
CciI TCATGA 1 cut(s) 3015
CseI GACGC 2 cut(s) 2728, 2852
Csp6I GTAC 3 cut(s) 1189, 1740, 3199
CviQI GTAC 3 cut(s) 1189, 1740, 3199
DraIII CACNNNGTG 3 cut(s) 1229, 1493, 3575
Eam1104I CTCTTC 2 cut(s) 135, 1411
EarI CTCTTC 2 cut(s) 135, 1411
EciI GGCGGA 1 cut(s) 1190
Eco32I GATATC 1 cut(s) 418
Eco47I GGWCC 8 cut(s) 705, 1281, 1425, 1712, 2432, 2551, 3394, 3479
Eco57I CTGAAG 2 cut(s) 203, 2067
Eco88I CYCGRG 1 cut(s) 2469
EcoNI CCTNNNNNAGG 1 cut(s) 576
EcoRI GAATTC 3 cut(s) 492, 2828, 3472
EcoRV GATATC 1 cut(s) 418
EcoT22I ATGCAT 1 cut(s) 2391
FalI AAGNNNNNCTT 2 cut(s) 2421, 2453
FaqI GGGAC 6 cut(s) 718, 1294, 1438, 2014, 2063, 3095
FblI GTMKAC 2 cut(s) 334, 2742
Fnu4HI GCNGC 4 cut(s) 294, 1797, 2463, 3539
FokI GGATG 7 cut(s) 407, 2066, 3006, 3122, 3288, 3354, 3398
Fsp4HI GCNGC 4 cut(s) 294, 1797, 2463, 3539
FspBI CTAG 9 cut(s) 35, 605, 722, 749, 1743, 1815, 2108, 2261, 3572
GluI GCNGC 4 cut(s) 294, 1797, 2463, 3539
GsuI CTGGAG 2 cut(s) 454, 469
HaeIII GGCC 2 cut(s) 849, 1569
HapII CCGG 6 cut(s) 702, 1422, 1566, 3079, 3305, 3477
HgaI GACGC 2 cut(s) 2728, 2852
HindIII AAGCTT 2 cut(s) 1726, 2155
HinfI GANTC 8 cut(s) 830, 889, 907, 1321, 2144, 2815, 3167, 3335
HpaII CCGG 6 cut(s) 702, 1422, 1566, 3079, 3305, 3477
Hpy166II GTNNAC 8 cut(s) 40, 61, 335, 1810, 2435, 2743, 2900, 3076
Hpy8I GTNNAC 8 cut(s) 40, 61, 335, 1810, 2435, 2743, 2900, 3076
Hpy99I CGWCG 1 cut(s) 3343
HpyAV CCTTC 8 cut(s) 178, 209, 582, 2091, 2279, 2423, 2542, 2717
HpyCH4III ACNGT 3 cut(s) 2321, 2773, 2959
HpyCH4IV ACGT 4 cut(s) 2074, 2399, 2717, 3197
HpyF10VI GCNNNNNNNGC 7 cut(s) 846, 990, 1134, 2459, 2502, 2606, 3362
HpySE526I ACGT 4 cut(s) 2074, 2399, 2717, 3197
LguI GCTCTTC 1 cut(s) 135
LmnI GCTCC 1 cut(s) 2591
Lsp1109I GCAGC 4 cut(s) 280, 1808, 2449, 3525
LweI GCATC 4 cut(s) 408, 1488, 2656, 2850
MaeI CTAG 9 cut(s) 35, 605, 722, 749, 1743, 1815, 2108, 2261, 3572
MaeII ACGT 4 cut(s) 2074, 2399, 2717, 3197
MfeI CAATTG 3 cut(s) 268, 1775, 3069
MflI RGATCY 6 cut(s) 5, 601, 745, 1033, 1177, 3310
MlyI GAGTC 2 cut(s) 3161, 3344
Mph1103I ATGCAT 1 cut(s) 2391
MseI TTAA 6 cut(s) 1541, 1619, 1892, 2180, 2274, 2334
MslI CAYNNNNRTG 6 cut(s) 915, 1347, 1707, 2652, 2706, 3463
MspA1I CMGCKG 2 cut(s) 181, 1940
MspI CCGG 6 cut(s) 702, 1422, 1566, 3079, 3305, 3477
MspR9I CCNGG 4 cut(s) 703, 1423, 3080, 3306
MunI CAATTG 3 cut(s) 268, 1775, 3069
Mva1269I GAATGC 1 cut(s) 226
MwoI GCNNNNNNNGC 7 cut(s) 846, 990, 1134, 2459, 2502, 2606, 3362
NciI CCSGG 4 cut(s) 703, 1423, 3080, 3306
NmuCI GTSAC 6 cut(s) 304, 1517, 1550, 1640, 2864, 3063
NsiI ATGCAT 1 cut(s) 2391
NspI RCATGY 6 cut(s) 1740, 2389, 2657, 3049, 3129, 3468
OliI CACNNNNGTG 1 cut(s) 1707
PaeI GCATGC 1 cut(s) 3468
PaeR7I CTCGAG 1 cut(s) 2469
PagI TCATGA 1 cut(s) 3015
PciI ACATGT 2 cut(s) 1736, 2653
PciSI GCTCTTC 1 cut(s) 135
PcsI WCGNNNNNNNCGW 1 cut(s) 3338
PctI GAATGC 1 cut(s) 226
PfeI GAWTC 6 cut(s) 830, 889, 907, 1321, 2144, 2815
Pfl23II CGTACG 1 cut(s) 3198
PflMI CCANNNNNTGG 2 cut(s) 506, 1493
PfoI TCCNGGA 3 cut(s) 701, 1421, 3304
PkrI GCNGC 4 cut(s) 295, 1798, 2464, 3540
PleI GAGTC 2 cut(s) 3161, 3343
PpsI GAGTC 2 cut(s) 3161, 3343
Ppu21I YACGTR 1 cut(s) 3198
PscI ACATGT 2 cut(s) 1736, 2653
PspLI CGTACG 1 cut(s) 3198
PstI CTGCAG 1 cut(s) 1798
PstNI CAGNNNCTG 2 cut(s) 2777, 3538
PsuI RGATCY 6 cut(s) 5, 601, 745, 1033, 1177, 3310
PvuII CAGCTG 2 cut(s) 181, 1940
RsaI GTAC 3 cut(s) 1190, 1741, 3200
RsaNI GTAC 3 cut(s) 1189, 1740, 3199
RseI CAYNNNNRTG 6 cut(s) 915, 1347, 1707, 2652, 2706, 3463
SapI GCTCTTC 1 cut(s) 135
SaqAI TTAA 6 cut(s) 1541, 1619, 1892, 2180, 2274, 2334
SatI GCNGC 4 cut(s) 294, 1797, 2463, 3539
SchI GAGTC 2 cut(s) 3161, 3344
ScrFI CCNGG 4 cut(s) 703, 1423, 3080, 3306
SfaNI GCATC 4 cut(s) 408, 1488, 2656, 2850
SfcI CTRYAG 2 cut(s) 1794, 2955
Sfr274I CTCGAG 1 cut(s) 2469
SinI GGWCC 8 cut(s) 705, 1281, 1425, 1712, 2432, 2551, 3394, 3479
SlaI CTCGAG 1 cut(s) 2469
SmiMI CAYNNNNRTG 6 cut(s) 915, 1347, 1707, 2652, 2706, 3463
SmlI CTYRAG 5 cut(s) 1042, 1330, 1474, 1578, 2469
SmoI CTYRAG 5 cut(s) 1042, 1330, 1474, 1578, 2469
SphI GCATGC 1 cut(s) 3468
SsiI CCGC 1 cut(s) 1175
SspI AATATT 2 cut(s) 1539, 2875
SspMI CTAG 9 cut(s) 35, 605, 722, 749, 1743, 1815, 2108, 2261, 3572
StyD4I CCNGG 4 cut(s) 701, 1421, 3078, 3304
TaaI ACNGT 3 cut(s) 2321, 2773, 2959
TaiI ACGT 4 cut(s) 2077, 2402, 2720, 3200
TaqII GACCGA 2 cut(s) 821, 1109
TatI WGTACW 2 cut(s) 1188, 1739
TfiI GAWTC 6 cut(s) 830, 889, 907, 1321, 2144, 2815
Tru1I TTAA 6 cut(s) 1541, 1619, 1892, 2180, 2274, 2334
Tru9I TTAA 6 cut(s) 1541, 1619, 1892, 2180, 2274, 2334
TscAI CASTG 7 cut(s) 778, 1066, 1210, 1230, 1498, 2809, 2964
TseFI GTSAC 6 cut(s) 304, 1517, 1550, 1640, 2864, 3063
TseI GCWGC 4 cut(s) 293, 1796, 2462, 3538
Tsp45I GTSAC 6 cut(s) 304, 1517, 1550, 1640, 2864, 3063
TspGWI ACGGA 1 cut(s) 3216
TspRI CASTG 7 cut(s) 778, 1066, 1210, 1230, 1498, 2809, 2964
Van91I CCANNNNNTGG 2 cut(s) 506, 1493
VneI GTGCAC 1 cut(s) 3074
VpaK11BI GGWCC 8 cut(s) 705, 1281, 1425, 1712, 2432, 2551, 3394, 3479
XagI CCTNNNNNAGG 1 cut(s) 576
XapI RAATTY 9 cut(s) 353, 492, 1888, 1962, 2135, 2191, 2682, 2828, 3472
XbaI TCTAGA 3 cut(s) 604, 748, 2107
XceI RCATGY 6 cut(s) 1740, 2389, 2657, 3049, 3129, 3468
XhoI CTCGAG 1 cut(s) 2469
XmiI GTMKAC 2 cut(s) 334, 2742
XspI CTAG 9 cut(s) 35, 605, 722, 749, 1743, 1815, 2108, 2261, 3572
Zsp2I ATGCAT 1 cut(s) 2391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.