Prupe.3G171300_v2.0.a1

Receptor protein kinase-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
19006436 .. 19009733
3298 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G171300.1

Sequence Viewer

Length: 3012 bp
ATGGTGTCTCCAGTAGAAAAACAGATATATTTGTTCATGCTTGTCGTCGTGACCCTTGTTTCGGTTTCTTCTTTCAAAGTAGCTACTTCTGCATCTCTTACAGCTCCATCATCAAGATCACCAGAAGGACAAGAAGCAGAGGCTCTTCTAAAATGGAGGGATAGCCTTGACAACCAAAACCAATCTCTCATGTCTTCATGGTTAGGAAAAAGTCCTTGCAACTGGACTGGAATTGCTTGCAATGAATTCAGAAGCATCACTAATATTAGCCTTAGCAGCATTGGATTAAGAGGTACTCTCTATGCTTTTGGCTTTTCATCTTTCCCTTCTCTCCAAAGCCTTAATCTCTACCAAAACTCTTTCTATGGTAGCATTCCCTCCAGCTTGGGCAACCTTTCTAAGCTCATCTACCTTGATTTGTCTTTTAATCAACTCTTCGGAAGAATCCCATCTGAGATAGGCCTTATGACAAGTCTTCACAAGCTTTATCTAAATGATAATGCCATAAATGGATCCATTCCTGAAGAAATAGGATCACTCAGCTCACTCAAAGTGCTGGGTTTGAGTGGAAACAACCTCACAGGTCCAATTCCAGCCTCCATTTGGAATATGGGCAACTTGTCCTTACTATATCTCTTCAAAAATGAACTTACTGGAACTGTGCCACAAGAAGTAGGAAATCTCAAATCTCTAAACCAGCTCCACTTGCAATTTAACAACCTAACTGGCCCAATTCCTGCATCCATAGGAAACCTTGTCAACTTAACTATTTTAGCACTTCTTGAGAATAATTTCTATGGATCCATTCCTCCAACTTTAGGAAACTTGACCAAGCTCACCTTATTAGATGTGCAGCAAAACCAATTGAGTGGCCCCATCCCACCAGAAATAGGAAAGCTCAAACTGCTATTCAAACTAGGATTGTTTGTAAACAATCTCAATGGCTCCATTCCTGGAGAATTCAAGAATCTTACAAATTTGCAAAATTTAGGGGTGTCTAGCAACATGTTGTCAGGCTATCTTCCTCAAGACATTTGCACTGGTGGATTACTTGTAAATTTTACAGCAAATGACAATTATTTCATTGGCTCTGTTCCGAAAAGCTTCAGAAACTGCTCCAGTTTATACAGAGTGAGGCTTGACAGAAACCAGTTATCAGGAAACATATCCGAAGACCTTGGAGTTTATCCACACTTAAACTACATTGATTTGAGCTATAATAATTTCTATGGGGAACTTTCTCCGAAGTGGGGTCTGTGCCAAAGTCTACAAAGCTTGAAAATCTCCAACAACAGAATTTCCGGAAGAATACCTACCCAACTTGGTGAGTCTCTTCAGCTACGAGTACTTGACCTCTCCTCGAATTATCTAGTTGGGGCTATCCCAAAGGAATTGGGGAGGTTAGCGTCACTGTTCAACCTTAACCTGGGTGGAAATAAACTTTCAGACAGTGTTCCATTGGAAATTGGAAGACTATCCAATCTAGAGCAACTTAACTTGGCAGCAAACAATCTCAGTGGATACATTCCCAAGCAATTATATGGGTGTTTAAAGTTATTGAACTTGAATTTGAGCACAAATGGATTGAATGAGAATCTTCCTTCTGAGATTGGCAGCTTAGAATCTCTTCAGGTGCTTGATCTTAGTCATAATTTACTGAGAGGAGAGATACCACCACAGTTTGGAGAATTGGAAAACTTAGAAGCACTGAATGTCTCTCACAATGAGCTCTCTGGCTCTTTCCCATCCACTTTTGATAATATGTTGCACTTGACTGCTATTGACATATCCTACAACCAATTGGAGGGTCCTCTTCCCAACATCAAAGCCTTCAACGAGGCTCCAATCGAAGCTTTAGAGAGTAACAAAGGCTTGTGTGGAAATGCCACAAGTCTGAAGGCATGCCAATCTACAATAAGAAACAGGAAAAAGAATAAAAACATCATTTTGATTGCAGCCCTCATTTTAGGAACTCTGTTTCTTGGGTTCATTGTGGTTGGGTTTCTCTACATTTGTCGTCACCAGACCGTAAGGGAAGAGCATGAAATGCCAAGAAGAGCAGATCTATTTGATATATGGAGCTATGATGGGAAACTGGTATATGAGGACATAATTGATGCTACAGAGGAATTTGATTCTAAGCATTGTGTAGGAGCAGGGGGGCATGCAAGTGTTTATAAAGCAATGCTACAAACAGGCCAGATTGTTGCAGTGAAGAAACTTCACACACTACAGGATGGTGGAATAGCAAATATAAAGGCTTTTGAGAGTGAGATTCGTGCACTCTCAGAAATCCGCCATCGCAACATTGTGAAGCTCTATGGTTTTTGTGCACATCCACGCCACTCATTCTTGGTTTACCAGTTCCTAGAAGGAGGTAGCTTAGAAGGGGTACTAAGGAATGACAGAGAAGCAACTATGTTTGAATGGACTGCAAGGATAAACCTTGTCAAAAGTGTGGCTGACGCTTTATCCTATATGCACCATGATTGCTTGCCTCCAATTGTTCATCGAGACATATCAAGCAAGAATATATTGCTGGATTTAGAGCTTGTTGCTTACATCTCTGACTTTGGAACAGCTAGAATCTTGAAGCCCGACTCTTCCAACTGGACTTCATTTGCAGGCACATTTGGATACACTGCTCCAGAGTTTGCATATACAATGGAAGTGAATGAGAAATGTGATGTTTATAGCTTTGGAGTGTTAGCTTTAGAAGTGATCATGGGAAAGCATCCAGGAGATCTCCTGATCTCCGTTCTCTCCTCGACAACATCGACTGCGCTTGATACCCCGCTGAGGGACGTTCTGGACCAAAGGCTTTCACCTCCTAAAGATCAAGTTGCAGAGAAAGTGATGTTTGTTGTGAAGCTTGCGTTTTCATGCTTGCAAACCAAACCACAATGTCGGCCAACCTTGCAACAGGTTTCCCAGGAGCTATCAATTCCAAAGGTACCTTTACCACTCACACTTGACAAAGTTGCCTTGGAACAGCTGGTTAGCCATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1004

Amino Acids

110.27

Weight (kDa)

6.07

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2178
Acc65I GGTACC 1 cut(s) 2953
AccB1I GGYRCC 1 cut(s) 2953
AccB7I CCANNNNNTGG 1 cut(s) 1682
AccI GTMKAC 1 cut(s) 1267
AccIII TCCGGA 1 cut(s) 1301
AciI CCGC 2 cut(s) 2296, 2795
AclWI GGATC 5 cut(s) 507, 520, 541, 795, 808
AcoI YGGCCR 1 cut(s) 2909
AcsI RAATTY 8 cut(s) 245, 959, 976, 985, 1057, 1296, 1567, 2129
AcuI CTGAAG 5 cut(s) 543, 1090, 1319, 1613, 1916
AfaI GTAC 4 cut(s) 295, 1347, 2394, 2955
AflIII ACRYGT 1 cut(s) 1005
AjnI CCWGG 4 cut(s) 952, 1425, 2737, 2931
Alw21I GWGCWC 4 cut(s) 1577, 1731, 2284, 2335
Alw26I GTCTC 4 cut(s) 12, 1335, 1720, 2508
Alw44I GTGCAC 2 cut(s) 2280, 2331
AlwI GGATC 5 cut(s) 507, 520, 541, 795, 808
AlwNI CAGNNNCTG 1 cut(s) 1113
Aor13HI TCCGGA 1 cut(s) 1301
AoxI GGCC 5 cut(s) 460, 727, 871, 2197, 2909
ApaLI GTGCAC 2 cut(s) 2280, 2331
ApeKI GCWGC 5 cut(s) 276, 853, 1502, 1614, 1955
ApoI RAATTY 8 cut(s) 245, 959, 976, 985, 1057, 1296, 1567, 2129
ArsI GACNNNNNNTTYG 2 cut(s) 43, 75
Asp700I GAANNNNTTC 3 cut(s) 791, 1103, 1626
Asp718I GGTACC 1 cut(s) 2953
AspLEI GCGC 1 cut(s) 2785
AspS9I GGNCC 5 cut(s) 584, 728, 872, 1808, 2812
AsuHPI GGTGA 5 cut(s) 111, 829, 1337, 2012, 2817
AvaII GGWCC 3 cut(s) 584, 1808, 2812
BaeGI GKGCMC 2 cut(s) 2284, 2335
BamHI GGATCC 2 cut(s) 512, 800
BanI GGYRCC 1 cut(s) 2953
BanII GRGCYC 1 cut(s) 1731
BarI GAAGNNNNNNTAC 2 cut(s) 1297, 1329
BbsI GAAGAC 4 cut(s) 186, 467, 1179, 1477
Bbv12I GWGCWC 4 cut(s) 1577, 1731, 2284, 2335
BbvCI CCTCAGC 1 cut(s) 2798
BbvI GCAGC 5 cut(s) 288, 865, 1514, 1626, 1967
BccI CCATC 7 cut(s) 115, 457, 884, 1753, 2081, 2231, 2307
BciT130I CCWGG 4 cut(s) 954, 1427, 2739, 2933
BciVI GTATCC 2 cut(s) 1514, 2630
BclI TGATCA 1 cut(s) 2721
BcoDI GTCTC 4 cut(s) 12, 1335, 1720, 2508
BfaI CTAG 6 cut(s) 917, 999, 1370, 1484, 2369, 2583
BfmI CTRYAG 2 cut(s) 2121, 2231
BfuI GTATCC 2 cut(s) 1514, 2630
BglII AGATCT 2 cut(s) 2062, 2743
BisI GCNGC 5 cut(s) 277, 854, 1503, 1615, 1956
BlsI GCNGC 5 cut(s) 278, 855, 1504, 1616, 1957
BmcAI AGTACT 1 cut(s) 1347
Bme1390I CCNGG 4 cut(s) 954, 1427, 2739, 2933
Bme18I GGWCC 3 cut(s) 584, 1808, 2812
BmgT120I GGNCC 5 cut(s) 584, 728, 872, 1808, 2812
BmiI GGNNCC 7 cut(s) 514, 802, 874, 946, 1809, 1842, 2955
BmrFI CCNGG 4 cut(s) 954, 1427, 2739, 2933
BmsI GCATC 5 cut(s) 101, 264, 749, 2107, 2743
BpiI GAAGAC 4 cut(s) 186, 467, 1179, 1477
BplI GAGNNNNNCTC 2 cut(s) 282, 314
BpmI CTGGAG 4 cut(s) 364, 975, 1102, 2631
Bpu10I CCTNAGC 2 cut(s) 272, 2798
BpuEI CTTGAG 2 cut(s) 803, 1011
BsaJI CCNNGG 4 cut(s) 1177, 1426, 2931, 2985
BsaWI WCCGGW 1 cut(s) 1301
Bse3DI GCAATG 2 cut(s) 247, 2190
BseAI TCCGGA 1 cut(s) 1301
BseBI CCWGG 4 cut(s) 954, 1427, 2739, 2933
BseDI CCNNGG 4 cut(s) 1177, 1426, 2931, 2985
BseGI GGATG 6 cut(s) 740, 876, 1745, 2242, 2335, 2734
BseMI GCAATG 2 cut(s) 247, 2190
BseMII CTCAG 7 cut(s) 444, 553, 1528, 1596, 1649, 2301, 2789
BseRI GAGGAG 3 cut(s) 1348, 1677, 2755
BseSI GKGCMC 2 cut(s) 2284, 2335
BseXI GCAGC 5 cut(s) 288, 865, 1514, 1626, 1967
BseYI CCCAGC 1 cut(s) 556
BsgI GTGCAG 1 cut(s) 872
BshFI GGCC 5 cut(s) 462, 729, 873, 2199, 2911
BshNI GGYRCC 1 cut(s) 2953
BsiHKAI GWGCWC 4 cut(s) 1577, 1731, 2284, 2335
BsiSI CCGG 1 cut(s) 1302
BslFI GGGAC 1 cut(s) 2816
BsmAI GTCTC 4 cut(s) 12, 1335, 1720, 2508
BsmFI GGGAC 1 cut(s) 2816
BsmI GAATGC 1 cut(s) 372
BsnI GGCC 5 cut(s) 462, 729, 873, 2199, 2911
Bsp1286I GDGCHC 4 cut(s) 1577, 1731, 2284, 2335
Bsp13I TCCGGA 1 cut(s) 1301
BspACI CCGC 2 cut(s) 2296, 2795
BspANI GGCC 5 cut(s) 462, 729, 873, 2199, 2911
BspCNI CTCAG 7 cut(s) 445, 552, 1527, 1597, 1650, 2300, 2790
BspEI TCCGGA 1 cut(s) 1301
BspLI GGNNCC 7 cut(s) 514, 802, 874, 946, 1809, 1842, 2955
BspPI GGATC 5 cut(s) 507, 520, 541, 795, 808
BspQI GCTCTTC 3 cut(s) 150, 2031, 2050
BspT107I GGYRCC 1 cut(s) 2953
BsrDI GCAATG 2 cut(s) 247, 2190
BssECI CCNNGG 4 cut(s) 1177, 1426, 2931, 2985
BssT1I CCWWGG 2 cut(s) 1177, 2985
Bst2UI CCWGG 4 cut(s) 954, 1427, 2739, 2933
Bst4CI ACNGT 5 cut(s) 661, 1413, 1451, 1680, 2029
Bst6I CTCTTC 9 cut(s) 150, 440, 641, 1338, 1632, 1818, 2031, 2050, 2608
BstAPI GCANNNNNTGC 1 cut(s) 2047
BstC8I GCNNGC 7 cut(s) 238, 1903, 2166, 2495, 2626, 2874, 2888
BstF5I GGATG 6 cut(s) 740, 876, 1745, 2242, 2335, 2734
BstHHI GCGC 1 cut(s) 2785
BstMAI GTCTC 4 cut(s) 12, 1335, 1720, 2508
BstMWI GCNNNNNNNGC 6 cut(s) 89, 276, 706, 904, 2047, 2917
BstNI CCWGG 4 cut(s) 954, 1427, 2739, 2933
BstNSI RCATGY 3 cut(s) 1009, 1905, 2168
BstSCI CCNGG 4 cut(s) 952, 1425, 2737, 2931
BstSFI CTRYAG 2 cut(s) 2121, 2231
BstSLI GKGCMC 2 cut(s) 2284, 2335
BstV1I GCAGC 5 cut(s) 288, 865, 1514, 1626, 1967
BstV2I GAAGAC 4 cut(s) 186, 467, 1179, 1477
BstX2I RGATCY 4 cut(s) 512, 800, 2062, 2743
BstXI CCANNNNNNTGG 1 cut(s) 869
BstYI RGATCY 4 cut(s) 512, 800, 2062, 2743
BsuI GTATCC 2 cut(s) 1514, 2630
BsuRI GGCC 5 cut(s) 462, 729, 873, 2199, 2911
BtgZI GCGATG 1 cut(s) 2285
BtsCI GGATG 6 cut(s) 740, 876, 1745, 2242, 2335, 2734
BtsI GCAGTG 2 cut(s) 2217, 2640
BtsIMutI CAGTG 7 cut(s) 1038, 1409, 1456, 1522, 1706, 2217, 2640
Cac8I GCNNGC 7 cut(s) 238, 1903, 2166, 2495, 2626, 2874, 2888
CaiI CAGNNNCTG 1 cut(s) 1113
CfoI GCGC 1 cut(s) 2785
Cfr13I GGNCC 5 cut(s) 584, 728, 872, 1808, 2812
CseI GACGC 2 cut(s) 1395, 2474
Csp6I GTAC 4 cut(s) 294, 1346, 2393, 2954
CspCI CAANNNNNGTGG 2 cut(s) 1498, 1533
CviQI GTAC 4 cut(s) 294, 1346, 2393, 2954
DraI TTTAAA 1 cut(s) 1551
EaeI YGGCCR 1 cut(s) 2909
Eam1104I CTCTTC 9 cut(s) 150, 440, 641, 1338, 1632, 1818, 2031, 2050, 2608
EarI CTCTTC 9 cut(s) 150, 440, 641, 1338, 1632, 1818, 2031, 2050, 2608
EciI GGCGGA 1 cut(s) 2285
Ecl136II GAGCTC 1 cut(s) 1729
Eco130I CCWWGG 2 cut(s) 1177, 2985
Eco147I AGGCCT 1 cut(s) 462
Eco24I GRGCYC 1 cut(s) 1731
Eco47I GGWCC 3 cut(s) 584, 1808, 2812
Eco53kI GAGCTC 1 cut(s) 1729
Eco57I CTGAAG 5 cut(s) 543, 1090, 1319, 1613, 1916
EcoICRI GAGCTC 1 cut(s) 1729
EcoO109I RGGNCCY 1 cut(s) 1808
EcoRI GAATTC 2 cut(s) 245, 959
EcoRII CCWGG 4 cut(s) 952, 1425, 2737, 2931
EcoT14I CCWWGG 2 cut(s) 1177, 2985
EcoT38I GRGCYC 1 cut(s) 1731
ErhI CCWWGG 2 cut(s) 1177, 2985
FalI AAGNNNNNCTT 2 cut(s) 824, 856
FaqI GGGAC 1 cut(s) 2816
FauI CCCGC 1 cut(s) 2802
FbaI TGATCA 1 cut(s) 2721
FblI GTMKAC 1 cut(s) 1267
Fnu4HI GCNGC 5 cut(s) 277, 854, 1503, 1615, 1956
FokI GGATG 6 cut(s) 727, 863, 1732, 2249, 2322, 2721
FriOI GRGCYC 1 cut(s) 1731
Fsp4HI GCNGC 5 cut(s) 277, 854, 1503, 1615, 1956
FspBI CTAG 6 cut(s) 917, 999, 1370, 1484, 2369, 2583
GlaI GCGC 1 cut(s) 2784
GluI GCNGC 5 cut(s) 277, 854, 1503, 1615, 1956
GsaI CCCAGC 1 cut(s) 560
GsuI CTGGAG 4 cut(s) 364, 975, 1102, 2631
HaeIII GGCC 5 cut(s) 462, 729, 873, 2199, 2911
HapII CCGG 1 cut(s) 1302
HgaI GACGC 2 cut(s) 1395, 2474
HhaI GCGC 1 cut(s) 2785
Hin6I GCGC 1 cut(s) 2783
HinP1I GCGC 1 cut(s) 2783
HincII GTYRAC 1 cut(s) 760
HindII GTYRAC 1 cut(s) 760
HindIII AAGCTT 5 cut(s) 482, 1102, 1273, 1851, 2870
HinfI GANTC 9 cut(s) 444, 967, 1328, 1594, 1622, 2135, 2275, 2586, 2600
HpaII CCGG 1 cut(s) 1302
HphI GGTGA 5 cut(s) 111, 829, 1337, 2012, 2817
Hpy166II GTNNAC 6 cut(s) 760, 931, 1268, 2282, 2333, 2359
Hpy8I GTNNAC 6 cut(s) 760, 931, 1268, 2282, 2333, 2359
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 7 cut(s) 119, 336, 1611, 1840, 1891, 2366, 2381
HpyCH4III ACNGT 5 cut(s) 661, 1413, 1451, 1680, 2029
HpyCH4IV ACGT 1 cut(s) 2805
HpyF10VI GCNNNNNNNGC 6 cut(s) 89, 276, 706, 904, 2047, 2917
HpySE526I ACGT 1 cut(s) 2805
HspAI GCGC 1 cut(s) 2783
Kpn2I TCCGGA 1 cut(s) 1301
KpnI GGTACC 1 cut(s) 2957
Ksp22I TGATCA 1 cut(s) 2721
LguI GCTCTTC 3 cut(s) 150, 2031, 2050
LmnI GCTCC 9 cut(s) 109, 705, 950, 1121, 1846, 2079, 2153, 2650, 2935
Lsp1109I GCAGC 5 cut(s) 288, 865, 1514, 1626, 1967
LweI GCATC 5 cut(s) 101, 264, 749, 2107, 2743
MaeI CTAG 6 cut(s) 917, 999, 1370, 1484, 2369, 2583
MaeII ACGT 1 cut(s) 2805
MaeIII GTNAC 4 cut(s) 49, 1407, 1862, 2018
MfeI CAATTG 3 cut(s) 863, 1799, 2502
MflI RGATCY 4 cut(s) 512, 800, 2062, 2743
MhlI GDGCHC 4 cut(s) 1577, 1731, 2284, 2335
MlyI GAGTC 2 cut(s) 1337, 2594
MmeI TCCRAC 3 cut(s) 836, 1311, 2631
MroI TCCGGA 1 cut(s) 1301
MroXI GAANNNNTTC 3 cut(s) 791, 1103, 1626
MseI TTAA 9 cut(s) 287, 342, 426, 714, 764, 1196, 1422, 1494, 1550
MslI CAYNNNNRTG 1 cut(s) 2169
MspA1I CMGCKG 2 cut(s) 2797, 2995
MspI CCGG 1 cut(s) 1302
MspR9I CCNGG 4 cut(s) 954, 1427, 2739, 2933
MunI CAATTG 3 cut(s) 863, 1799, 2502
Mva1269I GAATGC 1 cut(s) 372
MvaI CCWGG 4 cut(s) 954, 1427, 2739, 2933
MwoI GCNNNNNNNGC 6 cut(s) 89, 276, 706, 904, 2047, 2917
NlaIV GGNNCC 7 cut(s) 514, 802, 874, 946, 1809, 1842, 2955
NmuCI GTSAC 3 cut(s) 49, 1407, 2018
NspI RCATGY 3 cut(s) 1009, 1905, 2168
PaeI GCATGC 2 cut(s) 1905, 2168
PceI AGGCCT 1 cut(s) 462
PciI ACATGT 1 cut(s) 1005
PciSI GCTCTTC 3 cut(s) 150, 2031, 2050
PcsI WCGNNNNNNNCGW 1 cut(s) 2774
PctI GAATGC 1 cut(s) 372
PdmI GAANNNNTTC 3 cut(s) 791, 1103, 1626
PfeI GAWTC 7 cut(s) 444, 967, 1594, 1622, 2135, 2275, 2586
PflMI CCANNNNNTGG 1 cut(s) 1682
PfoI TCCNGGA 2 cut(s) 952, 2737
PkrI GCNGC 5 cut(s) 278, 855, 1504, 1616, 1957
PleI GAGTC 2 cut(s) 1336, 2594
PpsI GAGTC 2 cut(s) 1336, 2594
PpuMI RGGWCCY 1 cut(s) 1808
PscI ACATGT 1 cut(s) 1005
PsiI TTATAA 1 cut(s) 2178
Psp124BI GAGCTC 1 cut(s) 1731
Psp5II RGGWCCY 1 cut(s) 1808
Psp6I CCWGG 4 cut(s) 952, 1425, 2737, 2931
PspFI CCCAGC 1 cut(s) 556
PspGI CCWGG 4 cut(s) 952, 1425, 2737, 2931
PspN4I GGNNCC 7 cut(s) 514, 802, 874, 946, 1809, 1842, 2955
PspPI GGNCC 5 cut(s) 584, 728, 872, 1808, 2812
PspPPI RGGWCCY 1 cut(s) 1808
PstNI CAGNNNCTG 1 cut(s) 1113
PsuI RGATCY 4 cut(s) 512, 800, 2062, 2743
PvuII CAGCTG 1 cut(s) 2995
RsaI GTAC 4 cut(s) 295, 1347, 2394, 2955
RsaNI GTAC 4 cut(s) 294, 1346, 2393, 2954
RseI CAYNNNNRTG 1 cut(s) 2169
SacI GAGCTC 1 cut(s) 1731
SapI GCTCTTC 3 cut(s) 150, 2031, 2050
SaqAI TTAA 9 cut(s) 287, 342, 426, 714, 764, 1196, 1422, 1494, 1550
SatI GCNGC 5 cut(s) 277, 854, 1503, 1615, 1956
Sau96I GGNCC 5 cut(s) 584, 728, 872, 1808, 2812
ScaI AGTACT 1 cut(s) 1347
SchI GAGTC 2 cut(s) 1337, 2594
ScrFI CCNGG 4 cut(s) 954, 1427, 2739, 2933
SduI GDGCHC 4 cut(s) 1577, 1731, 2284, 2335
SfaNI GCATC 5 cut(s) 101, 264, 749, 2107, 2743
SfcI CTRYAG 2 cut(s) 2121, 2231
SinI GGWCC 3 cut(s) 584, 1808, 2812
SmiMI CAYNNNNRTG 1 cut(s) 2169
SmlI CTYRAG 2 cut(s) 782, 1026
SmoI CTYRAG 2 cut(s) 782, 1026
SphI GCATGC 2 cut(s) 1905, 2168
SseBI AGGCCT 1 cut(s) 462
SsiI CCGC 2 cut(s) 2296, 2795
SspI AATATT 1 cut(s) 265
SspMI CTAG 6 cut(s) 917, 999, 1370, 1484, 2369, 2583
SstI GAGCTC 1 cut(s) 1731
StuI AGGCCT 1 cut(s) 462
StyD4I CCNGG 4 cut(s) 952, 1425, 2737, 2931
StyI CCWWGG 2 cut(s) 1177, 2985
TaaI ACNGT 5 cut(s) 661, 1413, 1451, 1680, 2029
TaiI ACGT 1 cut(s) 2808
TaqI TCGA 5 cut(s) 1361, 1848, 2512, 2768, 2777
TatI WGTACW 1 cut(s) 1345
TfiI GAWTC 7 cut(s) 444, 967, 1594, 1622, 2135, 2275, 2586
Tru1I TTAA 9 cut(s) 287, 342, 426, 714, 764, 1196, 1422, 1494, 1550
Tru9I TTAA 9 cut(s) 287, 342, 426, 714, 764, 1196, 1422, 1494, 1550
TscAI CASTG 7 cut(s) 1045, 1416, 1456, 1522, 1713, 2217, 2647
TseFI GTSAC 3 cut(s) 49, 1407, 2018
TseI GCWGC 5 cut(s) 276, 853, 1502, 1614, 1955
Tsp45I GTSAC 3 cut(s) 49, 1407, 2018
TspGWI ACGGA 1 cut(s) 2746
TspRI CASTG 7 cut(s) 1045, 1416, 1456, 1522, 1713, 2217, 2647
Van91I CCANNNNNTGG 1 cut(s) 1682
VneI GTGCAC 2 cut(s) 2280, 2331
VpaK11BI GGWCC 3 cut(s) 584, 1808, 2812
XapI RAATTY 8 cut(s) 245, 959, 976, 985, 1057, 1296, 1567, 2129
XbaI TCTAGA 1 cut(s) 1483
XceI RCATGY 3 cut(s) 1009, 1905, 2168
XcmI CCANNNNNNNNNTGG 2 cut(s) 600, 607
XmiI GTMKAC 1 cut(s) 1267
XmnI GAANNNNTTC 3 cut(s) 791, 1103, 1626
XspI CTAG 6 cut(s) 917, 999, 1370, 1484, 2369, 2583
ZrmI AGTACT 1 cut(s) 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.