pycom10g02200

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
2427793 .. 2429940
2148 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g02200.1

Sequence Viewer

Length: 2148 bp
ATGACTAGAGTTTCAACTTATTGTGAAAAACTATGCTTTCTGGCTTGCCTTATCTTGTATCTTCAGCTAGCTTCATCACAAAAAGGTGCTTTTGCTTCTGCCAATTCCACTGAAGCAGAAGCACTTCTCAAATGGAAAGCTAGCTTTCAAAACCAAACCCAAAACAACCTGAGCTCATGGATGAATGCAAATGAAGCCCCATGCAATACTTGGATTGGAGTTTCATGCAACTCAGCTGGAAGCGTCAACAGATTAAACCTCACCAACTCTGGTATACAAGGTACTCTACTTGAATTTCCATTCACGTCCTTGCCCAATCTTGCATATGTTGATCTAAGCTTAAATGAACTTTTTGATCAAATCCCACCTGAGATCAGTTCCCTCACCAAACTCATCTATTTTGATGTATCCTACAATCAAATGTCTGGAAAAATCCCACCTAAAATCGGCCTTTTACCAAATCTTCAGGTCCTTCACCTAAATGCAAATAAGTTCAACGGCTCAATTCCTCGAGAAATAGGCCAACTTAAATTTGTATATGAGCTAGCTCTAAACTTAAACAATTTAGAGGGTTCAATTCCAGCTTCTGTGGGTAATTTGAGTCAATTGACTTTTTTAATTCTCTCTGGAAACCAATTTTCTGGTTCTATTCCTCCCGAAATAGGAAACCTTTCGAAATTGGTTGAAGTTGACCTGTATGATAACTATTTATCAGGTCCAATCCCTCCGAGTTTTGGAAACTTGAAATATCTAACCATCATGATGTTGTACAACAATACCCTTTCTGGTTCTATCCCAACTTCTTTTTGCAATTTGACAAACCTTGTTTATCTCTCTGTCTACGGTAATAAACTTTCCGGCACTATTCCCGAAGAGATTGGAAACTTGAAATTTGTTGAGGATGTACACCTGGCTGCTAACCGATTTTCTGGTTATTTGCCTCGAGATATTTGTAGTGGTGGACTGCTACAAAGGTTTACTGCAGAAAACAACGAATTTACAGGTCCAATCCCGAAAAGCTTGAAAGGTTGCAAGAGCTTAGTCAGAATCCGTCTTCAAGGGAACCAACTCAAAAGCAACATATCTGAAGACTTCGGTGTCTATCCGAATCTTCAGTTTGTTGACCTAAGCAACAACAATTTATATGGGGAAATCTCAGACATCTGGGGACAGTGTCCAAACTTAAAAACCCTACGTTTTGCAGGGAACAACCTTACTGGTAGCATACCATCTGAGATTGCCAATGCAACTAAAATTCAAGAACTCGATTTTTCTTCGAATCATCTGGTTGGGGTGGTTCCCAAGGATTTGGGGAGGTTGACTACTTTGGTGAATCTAAAGTTGAATGGCAATCAACTTTTGGGTTCTCTACCCTCAGAATTTGGAGCATTCACTCAACTCGAATATCTTGACTTGTCCACTAACAAGTTGAATGGCTCAATTCCGGGCATTTTTGGCAAATTGGTCCGTTTAAACTACTTGAATTTGAGCAACAACAATTTCAGTCAAGAAATTCCGTTTCAGTTAGGGAAGTTATTTCACCTGTCACAGTTAGATTTAAGTCGTAACTCACTTGACGGAAAGATTCCATCAGAAATTAGCAATATGCAAAGCTTGGAGTGGCTAAATCTTTCCCACAATAATCTTTCCGGTCTCATTCCAGCAACGTTTGATGGAATGCGAGGCTTGTTGTACATAGACGTATCCTACAATCGCTTGCAAGGTCCCATCCCCAACAACCGAGCTTTTCAAGATGCTCACAACTTTGAAGGGAACGAAGGATTGTGTGGAAATGTTGGAGGTCTAGAATCCTGCAATAAGCACGTCTCAAAAAGAAAAAACAAAAGAAAACTCGTGTTTGCAATCGTTTTCCCTATCTTGGGAGCAGTTTTACTTGCTTTCCTTGCAATTGTCTTCATCAAAACAAGAAGAAAGAAAGAGCCGGGAACAGAAAAAAGTGATATCCAGGATGAAATTTTTTCAATCTCTCATTTTGATGGAAAAAAATTGTATTGGGAGATCATAAGAGCAACCAATGGTTTTGACTCCATATTTTGCATCGGGAAGGGAGCGATCTGGAAGTGTCTACAAGGCAAAGCTACCATCAGGCAGCACAGTTGCAGTGAAGAAACTCCATCAAAAACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

716

Amino Acids

78.87

Weight (kDa)

8.24

Isoelectric Point (pI)

27.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 77 1.3e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 168 - 233 4.1e-06 Leucine-rich repeat region
LRR_8 PF13855 226 - 285 1.6e-06 Leucine rich repeat
LRR_4 PF12799 369 - 409 2.1e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 392 - 499 8.3e-06 Leucine-rich repeat region
LRR_8 PF13855 442 - 501 1.8e-07 Leucine rich repeat
LRR_14 PF23598 464 - 548 4.6e-08 Leucine-rich repeat region
LRR_8 PF13855 514 - 573 4.9e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1097
AccI GTMKAC 3 cut(s) 274, 840, 2086
AclI AACGTT 1 cut(s) 1667
AcsI RAATTY 9 cut(s) 293, 530, 890, 995, 1254, 1379, 1483, 1512, 1974
AcuI CTGAAG 5 cut(s) 47, 132, 449, 1097, 1107
AfaI GTAC 4 cut(s) 283, 770, 906, 1694
AfiI CCNNNNNNNGG 5 cut(s) 446, 662, 734, 1879, 1880
AjiI CACGTC 2 cut(s) 306, 1825
AjnI CCWGG 2 cut(s) 909, 1965
Alw21I GWGCWC 1 cut(s) 176
Alw26I GTCTC 2 cut(s) 1658, 1831
AlwNI CAGNNNCTG 1 cut(s) 587
Ama87I CYCGRG 2 cut(s) 510, 942
AoxI GGCC 2 cut(s) 448, 520
ApeKI GCWGC 2 cut(s) 914, 2110
ApoI RAATTY 9 cut(s) 293, 530, 890, 995, 1254, 1379, 1483, 1512, 1974
Asp700I GAANNNNTTC 2 cut(s) 123, 670
AspS9I GGNCC 5 cut(s) 469, 716, 1004, 1465, 1724
AsuC2I CCSGG 2 cut(s) 1446, 1944
AsuHPI GGTGA 5 cut(s) 253, 376, 467, 1342, 1532
AsuII TTCGAA 2 cut(s) 674, 1277
AsuNHI GCTAGC 3 cut(s) 67, 140, 544
AvaI CYCGRG 2 cut(s) 510, 942
AvaII GGWCC 5 cut(s) 469, 716, 1004, 1465, 1724
BanII GRGCYC 1 cut(s) 176
BauI CACGAG 1 cut(s) 1853
BbsI GAAGAC 3 cut(s) 1046, 1095, 1906
Bbv12I GWGCWC 1 cut(s) 176
BbvI GCAGC 2 cut(s) 901, 2122
BccI CCATC 8 cut(s) 764, 1237, 1597, 1667, 1736, 1991, 2111, 2143
BceAI ACGGC 1 cut(s) 514
BciT130I CCWGG 2 cut(s) 911, 1967
BciVI GTATCC 2 cut(s) 418, 1714
BclI TGATCA 1 cut(s) 355
BcnI CCSGG 2 cut(s) 1446, 1944
BcoDI GTCTC 2 cut(s) 1658, 1831
BfaI CTAG 5 cut(s) 6, 68, 141, 545, 1805
BfmI CTRYAG 1 cut(s) 981
BfuI GTATCC 2 cut(s) 418, 1714
BisI GCNGC 2 cut(s) 915, 2111
BlsI GCNGC 2 cut(s) 916, 2112
Bme1390I CCNGG 4 cut(s) 911, 1446, 1944, 1967
Bme18I GGWCC 5 cut(s) 469, 716, 1004, 1465, 1724
BmeT110I CYCGRG 2 cut(s) 510, 942
BmgBI CACGTC 2 cut(s) 306, 1825
BmgT120I GGNCC 5 cut(s) 469, 716, 1004, 1465, 1724
BmiI GGNNCC 3 cut(s) 1064, 1299, 1726
BmrFI CCNGG 4 cut(s) 911, 1446, 1944, 1967
BmsI GCATC 2 cut(s) 1744, 2067
BmtI GCTAGC 3 cut(s) 71, 144, 548
BpiI GAAGAC 3 cut(s) 1046, 1095, 1906
Bpu10I CCTNAGC 2 cut(s) 170, 1127
Bpu14I TTCGAA 2 cut(s) 674, 1277
BpuMI CCSGG 2 cut(s) 1446, 1944
BsaI GGTCTC 1 cut(s) 1658
BsaJI CCNNGG 1 cut(s) 1302
BsaWI WCCGGW 1 cut(s) 1649
Bsc4I CCNNNNNNNGG 5 cut(s) 446, 662, 734, 1879, 1880
Bse1I ACTGG 1 cut(s) 1222
BseBI CCWGG 2 cut(s) 911, 1967
BseDI CCNNGG 1 cut(s) 1302
BseGI GGATG 4 cut(s) 186, 907, 1728, 1975
BseLI CCNNNNNNNGG 5 cut(s) 446, 662, 734, 1879, 1880
BseMII CTCAG 6 cut(s) 161, 246, 360, 1170, 1224, 1389
BseNI ACTGG 1 cut(s) 1222
BseXI GCAGC 2 cut(s) 901, 2122
BshFI GGCC 2 cut(s) 450, 522
BsiHKAI GWGCWC 1 cut(s) 176
BsiHKCI CYCGRG 2 cut(s) 510, 942
BsiSI CCGG 4 cut(s) 858, 1445, 1650, 1943
BslFI GGGAC 2 cut(s) 1182, 1710
BslI CCNNNNNNNGG 5 cut(s) 446, 662, 734, 1879, 1880
BsmAI GTCTC 2 cut(s) 1658, 1831
BsmBI CGTCTC 1 cut(s) 1831
BsmFI GGGAC 2 cut(s) 1182, 1710
BsmI GAATGC 3 cut(s) 190, 1388, 1683
BsnI GGCC 2 cut(s) 450, 522
Bso31I GGTCTC 1 cut(s) 1658
BsoBI CYCGRG 2 cut(s) 510, 942
Bsp119I TTCGAA 2 cut(s) 674, 1277
Bsp1286I GDGCHC 1 cut(s) 176
Bsp1407I TGTACA 3 cut(s) 768, 904, 1692
Bsp143I GATC 5 cut(s) 331, 355, 372, 2019, 2073
BspANI GGCC 2 cut(s) 450, 522
BspCNI CTCAG 6 cut(s) 162, 245, 361, 1169, 1225, 1388
BspHI TCATGA 1 cut(s) 759
BspLI GGNNCC 3 cut(s) 1064, 1299, 1726
BspMAI CTGCAG 1 cut(s) 985
BspOI GCTAGC 3 cut(s) 71, 144, 548
BspT104I TTCGAA 2 cut(s) 674, 1277
BspTNI GGTCTC 1 cut(s) 1658
BsrGI TGTACA 3 cut(s) 768, 904, 1692
BsrI ACTGG 1 cut(s) 1222
BssECI CCNNGG 1 cut(s) 1302
BssMI GATC 5 cut(s) 331, 355, 372, 2019, 2073
BssNAI GTATAC 1 cut(s) 275
BssSI CACGAG 1 cut(s) 1853
BssT1I CCWWGG 1 cut(s) 1302
Bst1107I GTATAC 1 cut(s) 275
Bst2BI CACGAG 1 cut(s) 1853
Bst2UI CCWGG 2 cut(s) 911, 1967
Bst4CI ACNGT 4 cut(s) 845, 1173, 1551, 2117
Bst6I CTCTTC 1 cut(s) 867
BstAUI TGTACA 3 cut(s) 768, 904, 1692
BstBI TTCGAA 2 cut(s) 674, 1277
BstC8I GCNNGC 5 cut(s) 46, 69, 142, 546, 1718
BstDEI CTNAG 9 cut(s) 170, 232, 335, 369, 1039, 1127, 1156, 1233, 1375
BstF5I GGATG 4 cut(s) 186, 907, 1728, 1975
BstKTI GATC 5 cut(s) 334, 358, 375, 2022, 2076
BstMAI GTCTC 2 cut(s) 1658, 1831
BstMBI GATC 5 cut(s) 331, 355, 372, 2019, 2073
BstMWI GCNNNNNNNGC 3 cut(s) 194, 1455, 1904
BstNI CCWGG 2 cut(s) 911, 1967
BstSCI CCNGG 4 cut(s) 909, 1444, 1942, 1965
BstSFI CTRYAG 1 cut(s) 981
BstV1I GCAGC 2 cut(s) 901, 2122
BstV2I GAAGAC 3 cut(s) 1046, 1095, 1906
BstXI CCANNNNNNTGG 2 cut(s) 641, 1309
BstZ17I GTATAC 1 cut(s) 275
BsuI GTATCC 2 cut(s) 418, 1714
BsuRI GGCC 2 cut(s) 450, 522
BtrI CACGTC 2 cut(s) 306, 1825
BtsCI GGATG 4 cut(s) 186, 907, 1728, 1975
BtsI GCAGTG 1 cut(s) 2128
BtsIMutI CAGTG 3 cut(s) 108, 1178, 2128
Cac8I GCNNGC 5 cut(s) 46, 69, 142, 546, 1718
CaiI CAGNNNCTG 1 cut(s) 587
CciI TCATGA 1 cut(s) 759
Cfr13I GGNCC 5 cut(s) 469, 716, 1004, 1465, 1724
CseI GACGC 1 cut(s) 232
Csp6I GTAC 4 cut(s) 282, 769, 905, 1693
CviAII CATG 4 cut(s) 177, 201, 225, 760
CviQI GTAC 4 cut(s) 282, 769, 905, 1693
DdeI CTNAG 9 cut(s) 170, 232, 335, 369, 1039, 1127, 1156, 1233, 1375
DpnI GATC 5 cut(s) 333, 357, 374, 2021, 2075
DpnII GATC 5 cut(s) 331, 355, 372, 2019, 2073
DraI TTTAAA 1 cut(s) 1473
DrdI GACNNNNNNGTC 1 cut(s) 1097
DseDI GACNNNNNNGTC 1 cut(s) 1097
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
Ecl136II GAGCTC 1 cut(s) 174
Eco130I CCWWGG 1 cut(s) 1302
Eco24I GRGCYC 1 cut(s) 176
Eco31I GGTCTC 1 cut(s) 1658
Eco32I GATATC 1 cut(s) 1963
Eco47I GGWCC 5 cut(s) 469, 716, 1004, 1465, 1724
Eco53kI GAGCTC 1 cut(s) 174
Eco57I CTGAAG 5 cut(s) 47, 132, 449, 1097, 1107
Eco88I CYCGRG 2 cut(s) 510, 942
EcoICRI GAGCTC 1 cut(s) 174
EcoO109I RGGNCCY 2 cut(s) 469, 1724
EcoRII CCWGG 2 cut(s) 909, 1965
EcoRV GATATC 1 cut(s) 1963
EcoT14I CCWWGG 1 cut(s) 1302
EcoT38I GRGCYC 1 cut(s) 176
ErhI CCWWGG 1 cut(s) 1302
Esp3I CGTCTC 1 cut(s) 1831
FaeI CATG 4 cut(s) 180, 204, 228, 763
FaqI GGGAC 2 cut(s) 1182, 1710
FatI CATG 4 cut(s) 176, 200, 224, 759
FauNDI CATATG 1 cut(s) 325
FbaI TGATCA 1 cut(s) 355
FblI GTMKAC 3 cut(s) 274, 840, 2086
Fnu4HI GCNGC 2 cut(s) 915, 2111
FokI GGATG 4 cut(s) 193, 914, 1715, 1982
FriOI GRGCYC 1 cut(s) 176
Fsp4HI GCNGC 2 cut(s) 915, 2111
FspBI CTAG 5 cut(s) 6, 68, 141, 545, 1805
GluI GCNGC 2 cut(s) 915, 2111
HaeIII GGCC 2 cut(s) 450, 522
HapII CCGG 4 cut(s) 858, 1445, 1650, 1943
HgaI GACGC 1 cut(s) 232
Hin1II CATG 4 cut(s) 180, 204, 228, 763
HincII GTYRAC 4 cut(s) 247, 691, 1123, 1320
HindII GTYRAC 4 cut(s) 247, 691, 1123, 1320
HindIII AAGCTT 3 cut(s) 337, 1018, 1612
HinfI GANTC 8 cut(s) 601, 1047, 1108, 1279, 1333, 1585, 1808, 2045
HpaII CCGG 4 cut(s) 858, 1445, 1650, 1943
HphI GGTGA 5 cut(s) 253, 376, 467, 1342, 1532
Hpy188I TCNGA 8 cut(s) 729, 1046, 1087, 1107, 1159, 1234, 1378, 1594
HpyAV CCTTC 4 cut(s) 482, 1763, 1772, 2059
HpyCH4III ACNGT 4 cut(s) 845, 1173, 1551, 2117
HpyCH4IV ACGT 5 cut(s) 305, 1195, 1667, 1701, 1824
HpyF10VI GCNNNNNNNGC 3 cut(s) 194, 1455, 1904
HpyF3I CTNAG 9 cut(s) 170, 232, 335, 369, 1039, 1127, 1156, 1233, 1375
HpySE526I ACGT 5 cut(s) 305, 1195, 1667, 1701, 1824
Hsp92II CATG 4 cut(s) 180, 204, 228, 763
Ksp22I TGATCA 1 cut(s) 355
Kzo9I GATC 5 cut(s) 331, 355, 372, 2019, 2073
LmnI GCTCC 3 cut(s) 1385, 1883, 2069
Lsp1109I GCAGC 2 cut(s) 901, 2122
LweI GCATC 2 cut(s) 1744, 2067
MaeI CTAG 5 cut(s) 6, 68, 141, 545, 1805
MaeII ACGT 5 cut(s) 305, 1195, 1667, 1701, 1824
MaeIII GTNAC 2 cut(s) 1545, 1565
MalI GATC 5 cut(s) 333, 357, 374, 2021, 2075
MboI GATC 5 cut(s) 331, 355, 372, 2019, 2073
MfeI CAATTG 2 cut(s) 605, 1908
MhlI GDGCHC 1 cut(s) 176
MlyI GAGTC 2 cut(s) 610, 2039
MmeI TCCRAC 1 cut(s) 1777
MroXI GAANNNNTTC 2 cut(s) 123, 670
MseI TTAA 8 cut(s) 254, 341, 528, 557, 617, 1184, 1472, 1559
MslI CAYNNNNRTG 3 cut(s) 480, 761, 1995
MspA1I CMGCKG 1 cut(s) 236
MspI CCGG 4 cut(s) 858, 1445, 1650, 1943
MspR9I CCNGG 4 cut(s) 911, 1446, 1944, 1967
MssI GTTTAAAC 1 cut(s) 1473
MunI CAATTG 2 cut(s) 605, 1908
Mva1269I GAATGC 3 cut(s) 190, 1388, 1683
MvaI CCWGG 2 cut(s) 911, 1967
MwoI GCNNNNNNNGC 3 cut(s) 194, 1455, 1904
NciI CCSGG 2 cut(s) 1446, 1944
NdeI CATATG 1 cut(s) 325
NdeII GATC 5 cut(s) 331, 355, 372, 2019, 2073
NheI GCTAGC 3 cut(s) 67, 140, 544
NlaIII CATG 4 cut(s) 180, 204, 228, 763
NlaIV GGNNCC 3 cut(s) 1064, 1299, 1726
NmuCI GTSAC 1 cut(s) 1545
NspV TTCGAA 2 cut(s) 674, 1277
PaeR7I CTCGAG 2 cut(s) 510, 942
PagI TCATGA 1 cut(s) 759
PctI GAATGC 3 cut(s) 190, 1388, 1683
PdmI GAANNNNTTC 2 cut(s) 123, 670
PfeI GAWTC 6 cut(s) 1047, 1108, 1279, 1333, 1585, 1808
PflFI GACNNNGTC 1 cut(s) 1173
PfoI TCCNGGA 1 cut(s) 1965
PkrI GCNGC 2 cut(s) 916, 2112
PleI GAGTC 2 cut(s) 609, 2039
PmeI GTTTAAAC 1 cut(s) 1473
PpsI GAGTC 2 cut(s) 609, 2039
PpuMI RGGWCCY 2 cut(s) 469, 1724
Psp124BI GAGCTC 1 cut(s) 176
Psp1406I AACGTT 1 cut(s) 1667
Psp5II RGGWCCY 2 cut(s) 469, 1724
Psp6I CCWGG 2 cut(s) 909, 1965
PspGI CCWGG 2 cut(s) 909, 1965
PspN4I GGNNCC 3 cut(s) 1064, 1299, 1726
PspPI GGNCC 5 cut(s) 469, 716, 1004, 1465, 1724
PspPPI RGGWCCY 2 cut(s) 469, 1724
PstI CTGCAG 1 cut(s) 985
PstNI CAGNNNCTG 1 cut(s) 587
PsyI GACNNNGTC 1 cut(s) 1173
PvuII CAGCTG 1 cut(s) 236
RsaI GTAC 4 cut(s) 283, 770, 906, 1694
RsaNI GTAC 4 cut(s) 282, 769, 905, 1693
RseI CAYNNNNRTG 3 cut(s) 480, 761, 1995
SacI GAGCTC 1 cut(s) 176
SaqAI TTAA 8 cut(s) 254, 341, 528, 557, 617, 1184, 1472, 1559
SatI GCNGC 2 cut(s) 915, 2111
Sau3AI GATC 5 cut(s) 331, 355, 372, 2019, 2073
Sau96I GGNCC 5 cut(s) 469, 716, 1004, 1465, 1724
SchI GAGTC 2 cut(s) 610, 2039
ScrFI CCNGG 4 cut(s) 911, 1446, 1944, 1967
SduI GDGCHC 1 cut(s) 176
SfaNI GCATC 2 cut(s) 1744, 2067
SfcI CTRYAG 1 cut(s) 981
Sfr274I CTCGAG 2 cut(s) 510, 942
SfuI TTCGAA 2 cut(s) 674, 1277
SinI GGWCC 5 cut(s) 469, 716, 1004, 1465, 1724
SlaI CTCGAG 2 cut(s) 510, 942
SmiMI CAYNNNNRTG 3 cut(s) 480, 761, 1995
SmlI CTYRAG 2 cut(s) 510, 942
SmoI CTYRAG 2 cut(s) 510, 942
SspMI CTAG 5 cut(s) 6, 68, 141, 545, 1805
SstI GAGCTC 1 cut(s) 176
StyD4I CCNGG 4 cut(s) 909, 1444, 1942, 1965
StyI CCWWGG 1 cut(s) 1302
TaaI ACNGT 4 cut(s) 845, 1173, 1551, 2117
TaiI ACGT 5 cut(s) 308, 1198, 1670, 1704, 1827
TaqI TCGA 6 cut(s) 511, 674, 943, 1266, 1277, 1401
TatI WGTACW 3 cut(s) 768, 904, 1692
TfiI GAWTC 6 cut(s) 1047, 1108, 1279, 1333, 1585, 1808
Tru1I TTAA 8 cut(s) 254, 341, 528, 557, 617, 1184, 1472, 1559
Tru9I TTAA 8 cut(s) 254, 341, 528, 557, 617, 1184, 1472, 1559
TscAI CASTG 3 cut(s) 115, 1178, 2128
TseFI GTSAC 1 cut(s) 1545
TseI GCWGC 2 cut(s) 914, 2110
Tsp45I GTSAC 1 cut(s) 1545
TspDTI ATGAA 7 cut(s) 63, 197, 207, 213, 360, 1906, 1986
TspGWI ACGGA 4 cut(s) 1040, 1457, 1506, 1593
TspRI CASTG 3 cut(s) 115, 1178, 2128
Tth111I GACNNNGTC 1 cut(s) 1173
VpaK11BI GGWCC 5 cut(s) 469, 716, 1004, 1465, 1724
XapI RAATTY 9 cut(s) 293, 530, 890, 995, 1254, 1379, 1483, 1512, 1974
XbaI TCTAGA 1 cut(s) 1804
XcmI CCANNNNNNNNNTGG 1 cut(s) 207
XhoI CTCGAG 2 cut(s) 510, 942
XmiI GTMKAC 3 cut(s) 274, 840, 2086
XmnI GAANNNNTTC 2 cut(s) 123, 670
XspI CTAG 5 cut(s) 6, 68, 141, 545, 1805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.