Rmu_sc0002298.1_g000016

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002298.1
Physical Location & Seq
Forward (+)
60085 .. 62977
2893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002298.1_g000016.1.cds

Sequence Viewer

Length: 2670 bp
atggcaacccagaaacagaaaccactaaattgtagtcctgatttacagtttctacttatagttttcatggtggtttcttcttccttggcaacttcatcttcagcagcaacagaagcagaagctcttttgaattggaagtcaagccttgacaatacaagcctgtctctcttgtcctcatgggttggagacaacagcagcacttgcaattgggttgggatttcctgcaacaactttggaagcatcaaccatataaacctcactggttctggtttgagaggtacacttcatactttgagtttctcgactttcccaaatctcataagccttaacttgagccataacgccttttttggaaccattcccccaagtttaggtagcttgtctagtcttgaaatccttgatctttctcaaaataatattaatgggtccattcctgatgattttgtaatgctaggcaacttatccattctttcatttcggaaaaatcaaatttctggtcaaattcctcaagaaatgtacaagctaagttcacttagggtgattgacatatcaatcaacaatatcactggttcaatcccagcatctataggaaacctgtccaacttaattgttctagaccttcataaaaacgctttgtcaggatcgattccttccagtattggaaacctgactaggttgaaagtgttgtacctgatgtataatcaattatctggagccatcccaaatgaagtaggacagctcaagtttcttactgatttaggattggtaaataacaaactaaatggtaccattcctctagggataaacaaccttgtatatttgaagaatttttggtcgagcaacaacagcttgtctggttctattcctggagatatatgcagtggtggattgctcgaaatatttacagtacagaataatcagttgacaggtcccatacctagaagcttgagaaactgcaccagcttaactaggttgaggcttgaaagaaaccaactatcaggaaacataagtgaagagcttggcatttatccgaaattgaattacattgatctgagttataacagactgtatggagagctttctgagaactgggggaagtgccaaaacttgcaaggcttaaaactcagcaacaacagaatttcagggagaattcctcatcttgagggatctgagctacatgtacttgacctttcttcaaacggtctcattgggtcaattccaaaggaactaggaaagttgtcatccttgttcaacctcagccttgcggacaacagactttcgggcagtgtcccattagagattggaatgttgtccaatctgcagtatcttaacttaggagcaaacaatttgactggattgattccagagcaattagacgggtgcagaaagttgttgagcttgaatttgagcagaaatagatttcgtgagagcattcctcttgagatgggaagcatacaatctctagaaattcttgatctgagtcataatttgctaatgaatagaataccagcacagcttggagggttgcaaaagctagaagcactgaatctctcccacaatgagctcttgggttcaatcccatcctcttttgataacatgttgagcttgacagttgttgacatatcttacaatcaattggagggtcctcttcccaacaataaagcattccaagaggctccagttggagccttggggaataacaaagggttgtgtggtaatgccaccgtagttggagttctttatatgatatgccatacccgagagccgcaaaatgaaaaccagtttgaagtttggagcttggatggattacttgtatatgaagacatcgttgaagctacagagtcattcaactccaaacattgtgtaggagtaggagggactgcaagtgtttataaagctcaactgcaaacaggtcggattgttgcagtaaagaaacttcacacgctgcaggatagcggtggagaagcaattctgaaggcttttgagagtgagattcgtactcttgcagaaatccgtcaccgcaacatattgaagctttatggtttctgtgcacatccgcggcaccctcttttgctttacgagttcatagaaggaggaagcttggaaaacatattgactgatgaaaactatgcaagtaattttggatggatggagagggtgaatgttgtcaaagatgttgcaaatgcattatcttatatgcaccatgattgctcgcgtccaatagttcatcgagacatatcaagcaagaacatcctactggatttagagtatggagcttatgtgtctgattttggtacagctaggcttttgaagcctaatgcttctaattggacaacatttgcaggcacatttggatatagtgctccagagttggcatacacagtggaaccaaatgagaaatgtgatgtttatagctttggagtggtagcattggaagtgatcgtgggaaagcatcctggagatctcatctcctactttttgtcactttcatcaacatcaacagcacaaggtgtacaactgaaggatgtcttggaccaacgcctcttgcctcctaacaatcaagctgcggagaaagtgatcgcggttgcaaatcttgcatttgcatgcttgcgaacgagtccacaatctcgaccaaccatgcatcaagtttcccaggagttgttgttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

889

Amino Acids

97.02

Weight (kDa)

5.92

Isoelectric Point (pI)

33.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1059, 1893
Acc65I GGTACC 1 cut(s) 785
AccB1I GGYRCC 2 cut(s) 785, 2061
AccII CGCG 3 cut(s) 2059, 2215, 2582
AciI CCGC 8 cut(s) 1265, 1766, 1956, 2020, 2057, 2059, 2567, 2582
AclWI GGATC 2 cut(s) 649, 1174
AcsI RAATTY 7 cut(s) 489, 501, 826, 1137, 1149, 1402, 1467
AcuI CTGAAG 3 cut(s) 84, 1994, 2540
AdeI CACNNNGTG 1 cut(s) 2510
AfaI GTAC 9 cut(s) 280, 518, 689, 787, 909, 1182, 1999, 2296, 2514
AfiI CCNNNNNNNGG 1 cut(s) 371
AflIII ACRYGT 2 cut(s) 1177, 1596
AjnI CCWGG 3 cut(s) 865, 2455, 2652
AjuI GAANNNNNNNTTGG 2 cut(s) 2513, 2545
Alw21I GWGCWC 3 cut(s) 1566, 2053, 2365
Alw26I GTCTC 4 cut(s) 168, 180, 1208, 2226
Alw44I GTGCAC 1 cut(s) 2049
AlwI GGATC 2 cut(s) 649, 1174
Ama87I CYCGRG 1 cut(s) 1758
ApaLI GTGCAC 1 cut(s) 2049
ApeKI GCWGC 4 cut(s) 104, 195, 1945, 2564
ApoI RAATTY 7 cut(s) 489, 501, 826, 1137, 1149, 1402, 1467
ArsI GACNNNNNNTTYG 2 cut(s) 481, 513
AseI ATTAAT 1 cut(s) 420
Asp700I GAANNNNTTC 1 cut(s) 1968
Asp718I GGTACC 1 cut(s) 785
AspS9I GGNCC 4 cut(s) 426, 929, 1643, 2533
AsuHPI GGTGA 3 cut(s) 550, 2009, 2170
AvaI CYCGRG 1 cut(s) 1758
AvaII GGWCC 4 cut(s) 426, 929, 1643, 2533
BaeGI GKGCMC 1 cut(s) 2053
BanI GGYRCC 2 cut(s) 785, 2061
BanII GRGCYC 1 cut(s) 1566
BarI GAAGNNNNNNTAC 2 cut(s) 1920, 1952
BbsI GAAGAC 1 cut(s) 1827
Bbv12I GWGCWC 3 cut(s) 1566, 2053, 2365
BbvCI CCTCAGC 1 cut(s) 1256
BbvI GCAGC 4 cut(s) 116, 207, 1932, 2551
BccI CCATC 6 cut(s) 725, 1438, 1588, 1796, 2139, 2143
BcgI CGANNNNNNTGC 2 cut(s) 1895, 1929
BciT130I CCWGG 3 cut(s) 867, 2457, 2654
BcoDI GTCTC 4 cut(s) 168, 180, 1208, 2226
BfmI CTRYAG 4 cut(s) 585, 1319, 1836, 1946
BglII AGATCT 1 cut(s) 2461
BisI GCNGC 6 cut(s) 105, 196, 1766, 1946, 2060, 2565
BlsI GCNGC 6 cut(s) 106, 197, 1767, 1947, 2061, 2566
Bme1390I CCNGG 3 cut(s) 867, 2457, 2654
Bme18I GGWCC 4 cut(s) 426, 929, 1643, 2533
BmeT110I CYCGRG 1 cut(s) 1758
BmgT120I GGNCC 4 cut(s) 426, 929, 1643, 2533
BmrFI CCNGG 3 cut(s) 867, 2457, 2654
BmrI ACTGGG 1 cut(s) 1099
BmsI GCATC 4 cut(s) 249, 590, 2461, 2650
BmuI ACTGGG 1 cut(s) 1099
BpiI GAAGAC 1 cut(s) 1827
BplI GAGNNNNNCTC 4 cut(s) 1138, 1170, 1420, 1452
BpmI CTGGAG 5 cut(s) 732, 888, 1662, 2349, 2478
Bpu10I CCTNAGC 1 cut(s) 1256
BpuEI CTTGAG 6 cut(s) 352, 492, 725, 967, 1181, 1460
Bsa29I ATCGAT 1 cut(s) 644
BsaI GGTCTC 1 cut(s) 1208
BsaJI CCNNGG 4 cut(s) 84, 1689, 2057, 2652
BsaXI ACNNNNNCTCC 3 cut(s) 2265, 2295, 2648
Bsc4I CCNNNNNNNGG 1 cut(s) 371
Bse1I ACTGG 8 cut(s) 265, 571, 654, 1094, 1357, 1679, 1780, 2262
BseBI CCWGG 3 cut(s) 867, 2457, 2654
BseCI ATCGAT 1 cut(s) 644
BseDI CCNNGG 4 cut(s) 84, 1689, 2057, 2652
BseLI CCNNNNNNNGG 1 cut(s) 371
BseMII CTCAG 6 cut(s) 1043, 1074, 1138, 1161, 1270, 1469
BseNI ACTGG 8 cut(s) 265, 571, 654, 1094, 1357, 1679, 1780, 2262
BseSI GKGCMC 1 cut(s) 2053
BseXI GCAGC 4 cut(s) 116, 207, 1932, 2551
BseYI CCCAGC 1 cut(s) 577
BsgI GTGCAG 2 cut(s) 940, 1402
Bsh1236I CGCG 3 cut(s) 2059, 2215, 2582
BshNI GGYRCC 2 cut(s) 785, 2061
BshVI ATCGAT 1 cut(s) 644
BsiHKAI GWGCWC 3 cut(s) 1566, 2053, 2365
BsiHKCI CYCGRG 1 cut(s) 1758
BslFI GGGAC 3 cut(s) 915, 1274, 1891
BslI CCNNNNNNNGG 1 cut(s) 371
BsmAI GTCTC 4 cut(s) 168, 180, 1208, 2226
BsmFI GGGAC 3 cut(s) 915, 1274, 1891
BsmI GAATGC 2 cut(s) 1431, 1664
Bso31I GGTCTC 1 cut(s) 1208
BsoBI CYCGRG 1 cut(s) 1758
Bsp1286I GDGCHC 3 cut(s) 1566, 2053, 2365
Bsp1407I TGTACA 2 cut(s) 516, 2512
Bsp143I GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
BspACI CCGC 8 cut(s) 1265, 1766, 1956, 2020, 2057, 2059, 2567, 2582
BspCNI CTCAG 6 cut(s) 1044, 1075, 1137, 1162, 1269, 1470
BspDI ATCGAT 1 cut(s) 644
BspFNI CGCG 3 cut(s) 2059, 2215, 2582
BspMAI CTGCAG 2 cut(s) 1323, 1950
BspPI GGATC 2 cut(s) 649, 1174
BspQI GCTCTTC 1 cut(s) 1008
BspT107I GGYRCC 2 cut(s) 785, 2061
BspTNI GGTCTC 1 cut(s) 1208
BsrGI TGTACA 2 cut(s) 516, 2512
BsrI ACTGG 8 cut(s) 265, 571, 654, 1094, 1357, 1679, 1780, 2262
BssECI CCNNGG 4 cut(s) 84, 1689, 2057, 2652
BssMI GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
BssT1I CCWWGG 2 cut(s) 84, 1689
Bst2UI CCWGG 3 cut(s) 867, 2457, 2654
Bst4CI ACNGT 7 cut(s) 48, 907, 1068, 1202, 1612, 1726, 2383
Bst6I CTCTTC 2 cut(s) 1008, 1653
BstAPI GCANNNNNTGC 2 cut(s) 201, 2594
BstAUI TGTACA 2 cut(s) 516, 2512
BstC8I GCNNGC 4 cut(s) 2213, 2344, 2605, 2609
BstDEI CTNAG 9 cut(s) 524, 533, 1052, 1083, 1124, 1170, 1256, 1333, 1478
BstDSI CCRYGG 1 cut(s) 2057
BstFNI CGCG 3 cut(s) 2059, 2215, 2582
BstKTI GATC 8 cut(s) 403, 644, 1051, 1169, 1477, 2442, 2464, 2580
BstMAI GTCTC 4 cut(s) 168, 180, 1208, 2226
BstMBI GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
BstMWI GCNNNNNNNGC 5 cut(s) 113, 201, 846, 2311, 2594
BstNI CCWGG 3 cut(s) 867, 2457, 2654
BstNSI RCATGY 3 cut(s) 1181, 1600, 2607
BstSCI CCNGG 3 cut(s) 865, 2455, 2652
BstSFI CTRYAG 4 cut(s) 585, 1319, 1836, 1946
BstSLI GKGCMC 1 cut(s) 2053
BstUI CGCG 3 cut(s) 2059, 2215, 2582
BstV1I GCAGC 4 cut(s) 116, 207, 1932, 2551
BstV2I GAAGAC 1 cut(s) 1827
BstX2I RGATCY 2 cut(s) 1166, 2461
BstYI RGATCY 2 cut(s) 1166, 2461
Bsu15I ATCGAT 1 cut(s) 644
BsuTUI ATCGAT 1 cut(s) 644
BtgI CCRYGG 1 cut(s) 2057
BtsI GCAGTG 2 cut(s) 886, 1291
BtsIMutI CAGTG 6 cut(s) 258, 564, 886, 1291, 1541, 2388
Cac8I GCNNGC 4 cut(s) 2213, 2344, 2605, 2609
Cfr13I GGNCC 4 cut(s) 426, 929, 1643, 2533
Cfr42I CCGCGG 1 cut(s) 2060
ClaI ATCGAT 1 cut(s) 644
CseI GACGC 1 cut(s) 2204
Csp6I GTAC 9 cut(s) 279, 517, 688, 786, 908, 1181, 1998, 2295, 2513
CspCI CAANNNNNGTGG 2 cut(s) 1711, 1746
CviAII CATG 7 cut(s) 67, 177, 1178, 1597, 2204, 2604, 2638
CviQI GTAC 9 cut(s) 279, 517, 688, 786, 908, 1181, 1998, 2295, 2513
DdeI CTNAG 9 cut(s) 524, 533, 1052, 1083, 1124, 1170, 1256, 1333, 1478
DpnI GATC 8 cut(s) 402, 643, 1050, 1168, 1476, 2441, 2463, 2579
DpnII GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
DraIII CACNNNGTG 1 cut(s) 2510
Eam1104I CTCTTC 2 cut(s) 1008, 1653
EarI CTCTTC 2 cut(s) 1008, 1653
Ecl136II GAGCTC 1 cut(s) 1564
Eco130I CCWWGG 2 cut(s) 84, 1689
Eco24I GRGCYC 1 cut(s) 1566
Eco31I GGTCTC 1 cut(s) 1208
Eco47I GGWCC 4 cut(s) 426, 929, 1643, 2533
Eco53kI GAGCTC 1 cut(s) 1564
Eco57I CTGAAG 3 cut(s) 84, 1994, 2540
Eco88I CYCGRG 1 cut(s) 1758
EcoICRI GAGCTC 1 cut(s) 1564
EcoO109I RGGNCCY 2 cut(s) 929, 1643
EcoRI GAATTC 1 cut(s) 1149
EcoRII CCWGG 3 cut(s) 865, 2455, 2652
EcoT14I CCWWGG 2 cut(s) 84, 1689
EcoT22I ATGCAT 2 cut(s) 2188, 2643
EcoT38I GRGCYC 1 cut(s) 1566
ErhI CCWWGG 2 cut(s) 84, 1689
FaeI CATG 7 cut(s) 70, 180, 1181, 1600, 2207, 2607, 2641
FalI AAGNNNNNCTT 2 cut(s) 2513, 2545
FaqI GGGAC 3 cut(s) 915, 1274, 1891
FatI CATG 7 cut(s) 66, 176, 1177, 1596, 2203, 2603, 2637
Fnu4HI GCNGC 6 cut(s) 105, 196, 1766, 1946, 2060, 2565
FriOI GRGCYC 1 cut(s) 1566
Fsp4HI GCNGC 6 cut(s) 105, 196, 1766, 1946, 2060, 2565
GluI GCNGC 6 cut(s) 105, 196, 1766, 1946, 2060, 2565
GsaI CCCAGC 1 cut(s) 581
GsuI CTGGAG 5 cut(s) 732, 888, 1662, 2349, 2478
HgaI GACGC 1 cut(s) 2204
Hin1II CATG 7 cut(s) 70, 180, 1181, 1600, 2207, 2607, 2641
HincII GTYRAC 2 cut(s) 924, 1618
HindII GTYRAC 2 cut(s) 924, 1618
HindIII AAGCTT 3 cut(s) 943, 2033, 2098
HinfI GANTC 7 cut(s) 646, 1360, 1480, 1546, 1841, 1993, 2617
HphI GGTGA 3 cut(s) 550, 2009, 2170
Hpy166II GTNNAC 7 cut(s) 281, 530, 924, 1618, 2051, 2513, 2621
Hpy188I TCNGA 9 cut(s) 480, 1032, 1053, 1084, 1171, 1479, 1917, 1974, 2287
Hpy8I GTNNAC 7 cut(s) 281, 530, 924, 1618, 2051, 2513, 2621
HpyAV CCTTC 5 cut(s) 629, 660, 1969, 2084, 2515
HpyCH4III ACNGT 7 cut(s) 48, 907, 1068, 1202, 1612, 1726, 2383
HpyF10VI GCNNNNNNNGC 5 cut(s) 113, 201, 846, 2311, 2594
HpyF3I CTNAG 9 cut(s) 524, 533, 1052, 1083, 1124, 1170, 1256, 1333, 1478
Hsp92II CATG 7 cut(s) 70, 180, 1181, 1600, 2207, 2607, 2641
KpnI GGTACC 1 cut(s) 789
KspI CCGCGG 1 cut(s) 2060
Kzo9I GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
LguI GCTCTTC 1 cut(s) 1008
LmnI GCTCC 7 cut(s) 713, 1337, 1681, 1685, 1794, 2273, 2368
Lsp1109I GCAGC 4 cut(s) 116, 207, 1932, 2551
LweI GCATC 4 cut(s) 249, 590, 2461, 2650
MaeIII GTNAC 2 cut(s) 2015, 2481
MalI GATC 8 cut(s) 402, 643, 1050, 1168, 1476, 2441, 2463, 2579
MboI GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
MboII GAAGA 8 cut(s) 69, 72, 90, 835, 1025, 1185, 1640, 1832
MfeI CAATTG 2 cut(s) 205, 1634
MflI RGATCY 2 cut(s) 1166, 2461
MhlI GDGCHC 3 cut(s) 1566, 2053, 2365
MlyI GAGTC 3 cut(s) 1489, 1850, 2626
MmeI TCCRAC 5 cut(s) 163, 624, 1663, 1711, 1895
Mph1103I ATGCAT 2 cut(s) 2188, 2643
MroXI GAANNNNTTC 1 cut(s) 1968
MseI TTAA 6 cut(s) 327, 420, 605, 965, 1118, 1329
MslI CAYNNNNRTG 1 cut(s) 2602
MspA1I CMGCKG 1 cut(s) 2059
MspR9I CCNGG 3 cut(s) 867, 2457, 2654
MunI CAATTG 2 cut(s) 205, 1634
Mva1269I GAATGC 2 cut(s) 1431, 1664
MvaI CCWGG 3 cut(s) 867, 2457, 2654
MvnI CGCG 3 cut(s) 2059, 2215, 2582
MwoI GCNNNNNNNGC 5 cut(s) 113, 201, 846, 2311, 2594
NdeII GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
NlaIII CATG 7 cut(s) 70, 180, 1181, 1600, 2207, 2607, 2641
NmuCI GTSAC 2 cut(s) 2015, 2481
NsiI ATGCAT 2 cut(s) 2188, 2643
NspI RCATGY 3 cut(s) 1181, 1600, 2607
PaeI GCATGC 1 cut(s) 2607
PciI ACATGT 2 cut(s) 1177, 1596
PciSI GCTCTTC 1 cut(s) 1008
PctI GAATGC 2 cut(s) 1431, 1664
PdmI GAANNNNTTC 1 cut(s) 1968
PfeI GAWTC 4 cut(s) 646, 1360, 1546, 1993
PfoI TCCNGGA 2 cut(s) 865, 2455
PkrI GCNGC 6 cut(s) 106, 197, 1767, 1947, 2061, 2566
PleI GAGTC 3 cut(s) 1488, 1849, 2625
PpsI GAGTC 3 cut(s) 1488, 1849, 2625
PpuMI RGGWCCY 2 cut(s) 929, 1643
PscI ACATGT 2 cut(s) 1177, 1596
PshBI ATTAAT 1 cut(s) 420
PsiI TTATAA 2 cut(s) 1059, 1893
Psp124BI GAGCTC 1 cut(s) 1566
Psp5II RGGWCCY 2 cut(s) 929, 1643
Psp6I CCWGG 3 cut(s) 865, 2455, 2652
PspFI CCCAGC 1 cut(s) 577
PspGI CCWGG 3 cut(s) 865, 2455, 2652
PspPI GGNCC 4 cut(s) 426, 929, 1643, 2533
PspPPI RGGWCCY 2 cut(s) 929, 1643
PsrI GAACNNNNNNTAC 2 cut(s) 1719, 1751
PstI CTGCAG 2 cut(s) 1323, 1950
PsuI RGATCY 2 cut(s) 1166, 2461
RsaI GTAC 9 cut(s) 280, 518, 689, 787, 909, 1182, 1999, 2296, 2514
RsaNI GTAC 9 cut(s) 279, 517, 688, 786, 908, 1181, 1998, 2295, 2513
RseI CAYNNNNRTG 1 cut(s) 2602
SacI GAGCTC 1 cut(s) 1566
SacII CCGCGG 1 cut(s) 2060
SapI GCTCTTC 1 cut(s) 1008
SaqAI TTAA 6 cut(s) 327, 420, 605, 965, 1118, 1329
SatI GCNGC 6 cut(s) 105, 196, 1766, 1946, 2060, 2565
Sau3AI GATC 8 cut(s) 400, 641, 1048, 1166, 1474, 2439, 2461, 2577
Sau96I GGNCC 4 cut(s) 426, 929, 1643, 2533
SchI GAGTC 3 cut(s) 1489, 1850, 2626
ScrFI CCNGG 3 cut(s) 867, 2457, 2654
SduI GDGCHC 3 cut(s) 1566, 2053, 2365
SfaNI GCATC 4 cut(s) 249, 590, 2461, 2650
SfcI CTRYAG 4 cut(s) 585, 1319, 1836, 1946
Sfr303I CCGCGG 1 cut(s) 2060
SgrBI CCGCGG 1 cut(s) 2060
SinI GGWCC 4 cut(s) 426, 929, 1643, 2533
SmiMI CAYNNNNRTG 1 cut(s) 2602
SmlI CTYRAG 6 cut(s) 331, 507, 740, 946, 1160, 1439
SmoI CTYRAG 6 cut(s) 331, 507, 740, 946, 1160, 1439
SphI GCATGC 1 cut(s) 2607
SsiI CCGC 8 cut(s) 1265, 1766, 1956, 2020, 2057, 2059, 2567, 2582
SspI AATATT 2 cut(s) 418, 900
SstI GAGCTC 1 cut(s) 1566
StyD4I CCNGG 3 cut(s) 865, 2455, 2652
StyI CCWWGG 2 cut(s) 84, 1689
TaaI ACNGT 7 cut(s) 48, 907, 1068, 1202, 1612, 1726, 2383
TaqI TCGA 6 cut(s) 302, 644, 836, 894, 2230, 2629
TatI WGTACW 4 cut(s) 516, 907, 1180, 2512
TauI GCSGC 2 cut(s) 1768, 2062
TfiI GAWTC 4 cut(s) 646, 1360, 1546, 1993
Tru1I TTAA 6 cut(s) 327, 420, 605, 965, 1118, 1329
Tru9I TTAA 6 cut(s) 327, 420, 605, 965, 1118, 1329
TscAI CASTG 6 cut(s) 265, 571, 886, 1291, 1548, 2388
TseFI GTSAC 2 cut(s) 2015, 2481
TseI GCWGC 4 cut(s) 104, 195, 1945, 2564
Tsp45I GTSAC 2 cut(s) 2015, 2481
TspGWI ACGGA 1 cut(s) 2003
TspRI CASTG 6 cut(s) 265, 571, 886, 1291, 1548, 2388
VneI GTGCAC 1 cut(s) 2049
VpaK11BI GGWCC 4 cut(s) 426, 929, 1643, 2533
VspI ATTAAT 1 cut(s) 420
XapI RAATTY 7 cut(s) 489, 501, 826, 1137, 1149, 1402, 1467
XbaI TCTAGA 2 cut(s) 613, 1462
XceI RCATGY 3 cut(s) 1181, 1600, 2607
XmnI GAANNNNTTC 1 cut(s) 1968
Zsp2I ATGCAT 2 cut(s) 2188, 2643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.