pycom15g38570

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
38330565 .. 38334381
3817 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g38570.2

Sequence Viewer

Length: 3456 bp
ATGTACACAAAATTGACAGAGGCCATGATATCTTTATCTTTTCACAAAGTATGTTCTCTGGCTTACTGCCTTATCTTATTCATACCTCTTCTTTCATTGCCAAGTCACGTTGCTTTTGCTACTACTGAAGCAGAAGCACTTCTCAAATGGAAAGCCACCTTTCAAAACCAAACCCATCTCCAAAATCTCGCCTCTTGGACTTACTCTCCCAGTAATAATGGCACCACCAATTCTTCAAGAAATTCCAAATCGCAAGTACCTCCATGCTTCTGGACGGGTATTTCATGCAATGTTGCAGGAAGTGTCATTTCGATAAACCTTACCAATTCCAATATACAAGGTACGCTACATGATTTTTCATTCATGTCCTTCCCCAATCTTGAATACCTCAACCTCGGTGTCAATAATTTCTTTGATACCATTCCACGTCATATCAGTTCCCTTTCGAAACTCAACAATCTCAATCTCTGTAACAATCGGTTTTTTGGAAGTATTCCAAAAGAGATAGGGAACTTGAAGTCTCTTATGGACCGAGATTTGTCTAAGAATCAACTTAGTGGTTCAATCCCAACATCCATAGGTGATCTCACAAACCTTACCCAGCTCTCTCTCTCCAAAAATAATCTTTCTGGTTCTATTCCTGAAGAGATAGGTAACTTAAAATCTCTTGCAAACCTTGATCTGAGTGAAAATCAGATCAATGGTTCAATCCCAACATCTGTTGGAGATCTCACAAACCTTACCTTTCTCCATCTCTTTGCAAATAATCTTTCTGGTTCTATTCCTAAGGAGATAGGTAATTTAAAATCTCTTGCAACCCTTGATATGAGTGAAAATCAGCTCAGTGGTTCAATCCCAACATTCGTAGGAAATCTCACAAACCTTATCTATCTCACTCTCTTTGAAAATAATCTTTCTGGTTCTATTCCTAAAGAGATAGGTAACTTGAAATCTGTTGTGTGGCTCTACTTGCATAAGAATCAGCTCAGTGGTTCAATCCCAACATCCATAGGTGATCTCACAAACCTTACCCATCTCCTTCTCTTCAAAAACAATTTTTCTGGTTTTATTCCTAAAGAGATAGGTAACTTAAAATCTCTTGCACACCTTGATCTGAGTGAAAATCAGCTCAATGCTTCAATCCCAACATCCTTAAGAGATCTAACAAGCCTTACCATTCTCAATATCTTCAGAAATAATCTTTCTGGTTCAATCCCAACATTCATAGGAGATCTCACAAACCTTACTGATCTCCGTCTCTTCGAAAATAATCTTTCTGGTTCAATTCCTGCTTCAATTGGTAACCTGACAAACTTGGAGTCCTTATTCCTAAGTGTGAACCAACTCTCTGGCCCCATCCCGCAAGAGATAGTGAACTTGAAGAATTTGATTGTTCTAATGTTGTATAATAACCATTTTTCTGGTTATGTACCCCAAAATATTTGCAGCAGTGGACTCCTCAGAAACTTTTCAATATCCAATAACCATTTGACTGGTCCAATCCCCAAAAGCTTGAAAATCTGCACCAGCTTAGTGAGAGTCCATCTTGAAGGAAACAAGTTGACAGGAAACATATCTGAAGACTTTGGGGTTTATCCAAATCTTTATTTTATGGATATGAGCCACAATAACTTCTATGGGGAAATCTCACAAACTTGGGGACAATGCCCACAATTGGAAACCCTACTAATTGCGGGAAACAACCTTACTGGTAGCATACCTCCTGATATTGCCAATGCACAAAAACTTCATGAGCTAGATCTTTCTTCAAATCGCTTAGTTGGGGCGATTCCGAATGGATTCAGGAGAATGACTTCTTTGTTGAAGTTGATGTTGAATGGAAATCAACTTTCAGGCCCTATATCATTGGAATTTGGATCACTAATTGATCTTGAATATCTTGACTTGTCATCAAACAAATTCAACGGGTTAGTTCCTAGCAATCTAGGTGCCTTTCTCAGACTACACCATCTGAATTTAAGCAACAACAACTTTTCTGAACAAATTCCACCTGAATTGGGGAAGTTAGTTCAGTTGAACGACCTTGATTTAAGTTACAACTCACTTGAAGGTAGTATACCACCAGAAATCGCCAATATGGAGAGTTTGGAGACGCTTAATCTTTCCCACAACAATCTTTCAGGTTTCGTACCATCAAGTATTGAAGGTATGCTCGGCTTATCGTATGTTGACATATCTTACAATGAATTGGAAGGTCCTCTTCCCAACAACAAAGCATTTCAAGAAGCTCCCCCAGAAGTTGTACAAGGGAACAAAGGATTGTGCGGCAATATTACATCTTTGCAACCCTGTACGCATGGCTCAAGAAAGAACCACAAGTGGGTATTTGTAATCTCATTCACCCTTCTATCAGCAGTCTTCCTTCTTTGTGCTTTCTTTACAATTGTCTTCGTAGTGGAAAGAAAGAAGAAGCATCGGTATAAAGGAGAAAAAAACATGCATGAAGAAGTATCGTTTTCAGTTTTGAATTTTGATGGAATATCAATGTATGAGGAAATCATAAGGGCGACCGAAGACTTTGATTCCACATATTGCATCGGGAGGGGAGGACAAGGAAGCGTCTATAAAGCAAACTTGTCATCTACCATCACAGTGGCTGTGAAGAAACTCCATCAGTTGAGGGATGTCGAGAAGAACTTGGAAGAGGGATTCTTGAATGAAATAAGAGCACTGACAGAGGTAAGACACCGGAACATCGTGAAGCTTTATGGTTTCTGTTTGCACCACCGACACTCGTTCTTGGTGTGCGAGTTTCTTGAAAGAGGTAGCCTGGCTAAAATTTTGAGCGAAGATGAAAAAGCTAAAGAAGTGGGATGGAGAAAAAGGGTGAATATTGTTAATGGTGTAGCTTATGCCTTAGCATATATGCACCACGACGTTGTGCCACCAATTGTTCACCGGGATATATCAAGCAAGAACATTTTACTGAATTTTGAATATGAGGCCTTGGTTTCAGACTTTGGCACTGCTAAGTTTTTGAATCGAGACTCAACTAATTGGACTGCTGTTGCAGGCACATATGGATATATTGCACCAGAGCTTGCATATACAATGGAAGTGAATGATAAATGCGATGTTTATAGCTTTGGAGTGGTCGCATTGGAAATAATTATGGGGAGGCATCCTGAAGATTTTTTCTCATCATTCTCAACAATGCCTTATTCGTTCTCATCATTATCATCTGCGTTACTAGCCCATCAAATGCCAATTGTGGATGTTTTGGACCAACGCATTTTGCCTCCAACGCATCAAGAAGCAGGGGAAGTTCTCTCTCTTGTGAAGATTGCGCTTTCATGCTTGCATCCTAGTCCGCAATCTCGTCCAACAATGAAACAAGTTTCTCAACTCCTCTCAACTCAGAAGCTACATTTGTCAAAGCCATTACGTATGATAACCTACGGTGAGTTGCTTACACTGGATCCTTTAACTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1152

Amino Acids

127.28

Weight (kDa)

6.2

Isoelectric Point (pI)

31.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 221, 1949
AccI GTMKAC 1 cut(s) 2077
AciI CCGC 4 cut(s) 1361, 1694, 2286, 3332
AclWI GGATC 3 cut(s) 1885, 3434, 3447
AcsI RAATTY 9 cut(s) 241, 1384, 1871, 1919, 1975, 2004, 2488, 2799, 2950
AcuI CTGAAG 5 cut(s) 147, 663, 1174, 1599, 3168
AfaI GTAC 7 cut(s) 5, 258, 343, 1431, 2151, 2265, 2314
AfiI CCNNNNNNNGG 3 cut(s) 1675, 2018, 2341
AflII CTTAAG 1 cut(s) 1153
AjiI CACGTC 1 cut(s) 428
AjnI CCWGG 1 cut(s) 2790
Alw21I GWGCWC 1 cut(s) 2692
Alw26I GTCTC 4 cut(s) 525, 1262, 2105, 3000
AlwI GGATC 3 cut(s) 1885, 3434, 3447
AlwNI CAGNNNCTG 1 cut(s) 2618
AoxI GGCC 4 cut(s) 21, 1351, 1855, 2964
ApeKI GCWGC 1 cut(s) 1446
ApoI RAATTY 9 cut(s) 241, 1384, 1871, 1919, 1975, 2004, 2488, 2799, 2950
ArsI GACNNNNNNTTYG 2 cut(s) 1304, 1336
Asp700I GAANNNNTTC 5 cut(s) 138, 1468, 1799, 1813, 2004
AspLEI GCGC 1 cut(s) 3310
AspS9I GGNCC 6 cut(s) 529, 1352, 1496, 1856, 2216, 3244
AsuC2I CCSGG 1 cut(s) 2921
AsuHPI GGTGA 6 cut(s) 593, 1025, 2353, 2860, 2909, 3434
AsuII TTCGAA 2 cut(s) 446, 1263
AvaII GGWCC 4 cut(s) 529, 1496, 2216, 3244
AxyI CCTNAGG 1 cut(s) 786
BamHI GGATCC 1 cut(s) 3439
BanI GGYRCC 2 cut(s) 221, 1949
BarI GAAGNNNNNNTAC 2 cut(s) 2061, 2093
BbsI GAAGAC 4 cut(s) 1587, 2371, 2401, 2541
Bbv12I GWGCWC 1 cut(s) 2692
BbvI GCAGC 1 cut(s) 1458
BciT130I CCWGG 1 cut(s) 2792
BcnI CCSGG 1 cut(s) 2921
BcoDI GTCTC 4 cut(s) 525, 1262, 2105, 3000
BfaI CTAG 5 cut(s) 1757, 1938, 1946, 3212, 3327
BfrI CTTAAG 1 cut(s) 1153
BglII AGATCT 4 cut(s) 727, 1159, 1231, 1759
BisI GCNGC 2 cut(s) 1447, 2287
BlsI GCNGC 2 cut(s) 1448, 2288
Bme1390I CCNGG 2 cut(s) 2792, 2921
Bme18I GGWCC 4 cut(s) 529, 1496, 2216, 3244
BmgBI CACGTC 1 cut(s) 428
BmgT120I GGNCC 6 cut(s) 529, 1352, 1496, 1856, 2216, 3244
BmiI GGNNCC 4 cut(s) 223, 1354, 1951, 3441
BmrFI CCNGG 2 cut(s) 2792, 2921
BmrI ACTGGG 1 cut(s) 204
BmsI GCATC 5 cut(s) 2443, 2565, 3151, 3277, 3331
BmuI ACTGGG 1 cut(s) 204
BpiI GAAGAC 4 cut(s) 1587, 2371, 2401, 2541
Bpu10I CCTNAGC 1 cut(s) 2878
Bpu14I TTCGAA 2 cut(s) 446, 1263
BpuEI CTTGAG 1 cut(s) 2308
BpuMI CCSGG 1 cut(s) 2921
BsaAI YACGTR 1 cut(s) 3407
BsaJI CCNNGG 2 cut(s) 394, 2967
BsaWI WCCGGW 1 cut(s) 2709
BsaXI ACNNNNNCTCC 2 cut(s) 190, 220
Bsc4I CCNNNNNNNGG 3 cut(s) 1675, 2018, 2341
Bse1I ACTGG 4 cut(s) 210, 1498, 1714, 3441
Bse21I CCTNAGG 1 cut(s) 786
Bse3DI GCAATG 2 cut(s) 95, 295
BseBI CCWGG 1 cut(s) 2792
BseDI CCNNGG 2 cut(s) 394, 2967
BseGI GGATG 9 cut(s) 572, 1004, 1148, 1356, 2650, 2840, 3142, 3241, 3322
BseLI CCNNNNNNNGG 3 cut(s) 1675, 2018, 2341
BseMI GCAATG 2 cut(s) 95, 295
BseMII CTCAG 7 cut(s) 674, 856, 1000, 1106, 1474, 1972, 3392
BseNI ACTGG 4 cut(s) 210, 1498, 1714, 3441
BseRI GAGGAG 2 cut(s) 1448, 3359
BseXI GCAGC 1 cut(s) 1458
BseYI CCCAGC 1 cut(s) 600
BsgI GTGCAG 1 cut(s) 1507
Bsh1285I CGRYCG 1 cut(s) 2532
BshFI GGCC 4 cut(s) 23, 1353, 1857, 2966
BshNI GGYRCC 2 cut(s) 221, 1949
BsiEI CGRYCG 1 cut(s) 2532
BsiHKAI GWGCWC 1 cut(s) 2692
BsiSI CCGG 2 cut(s) 2710, 2920
BslFI GGGAC 1 cut(s) 1674
BslI CCNNNNNNNGG 3 cut(s) 1675, 2018, 2341
BsmAI GTCTC 4 cut(s) 525, 1262, 2105, 3000
BsmBI CGTCTC 2 cut(s) 1262, 2105
BsmFI GGGAC 1 cut(s) 1674
BsnI GGCC 4 cut(s) 23, 1353, 1857, 2966
Bsp119I TTCGAA 2 cut(s) 446, 1263
Bsp1286I GDGCHC 1 cut(s) 2692
Bsp1407I TGTACA 2 cut(s) 3, 2263
BspACI CCGC 4 cut(s) 1361, 1694, 2286, 3332
BspANI GGCC 4 cut(s) 23, 1353, 1857, 2966
BspCNI CTCAG 7 cut(s) 675, 855, 999, 1107, 1473, 1971, 3391
BspHI TCATGA 1 cut(s) 1750
BspLI GGNNCC 4 cut(s) 223, 1354, 1951, 3441
BspPI GGATC 3 cut(s) 1885, 3434, 3447
BspT104I TTCGAA 2 cut(s) 446, 1263
BspT107I GGYRCC 2 cut(s) 221, 1949
BspTI CTTAAG 1 cut(s) 1153
BsrDI GCAATG 2 cut(s) 95, 295
BsrGI TGTACA 2 cut(s) 3, 2263
BsrI ACTGG 4 cut(s) 210, 1498, 1714, 3441
BssECI CCNNGG 2 cut(s) 394, 2967
BssNAI GTATAC 1 cut(s) 2078
BssT1I CCWWGG 1 cut(s) 2967
Bst1107I GTATAC 1 cut(s) 2078
Bst2UI CCWGG 1 cut(s) 2792
Bst4CI ACNGT 2 cut(s) 2614, 3422
Bst6I CTCTTC 6 cut(s) 93, 639, 1049, 1265, 2226, 2658
BstAFI CTTAAG 1 cut(s) 1153
BstAUI TGTACA 2 cut(s) 3, 2263
BstBAI YACGTR 1 cut(s) 3407
BstBI TTCGAA 2 cut(s) 446, 1263
BstC8I GCNNGC 3 cut(s) 3034, 3063, 3320
BstEII GGTNACC 1 cut(s) 1301
BstF5I GGATG 9 cut(s) 572, 1004, 1148, 1356, 2650, 2840, 3142, 3241, 3322
BstHHI GCGC 1 cut(s) 3310
BstMAI GTCTC 4 cut(s) 525, 1262, 2105, 3000
BstMCI CGRYCG 1 cut(s) 2532
BstMWI GCNNNNNNNGC 3 cut(s) 970, 3212, 3265
BstNI CCWGG 1 cut(s) 2792
BstNSI RCATGY 1 cut(s) 2461
BstPI GGTNACC 1 cut(s) 1301
BstSCI CCNGG 2 cut(s) 2790, 2919
BstSNI TACGTA 1 cut(s) 3407
BstV1I GCAGC 1 cut(s) 1458
BstV2I GAAGAC 4 cut(s) 1587, 2371, 2401, 2541
BstX2I RGATCY 5 cut(s) 727, 1159, 1231, 1759, 3439
BstXI CCANNNNNNTGG 5 cut(s) 270, 1349, 1421, 1493, 2614
BstYI RGATCY 5 cut(s) 727, 1159, 1231, 1759, 3439
BstZ17I GTATAC 1 cut(s) 2078
Bsu36I CCTNAGG 1 cut(s) 786
BsuRI GGCC 4 cut(s) 23, 1353, 1857, 2966
BtgZI GCGATG 1 cut(s) 3108
BtrI CACGTC 1 cut(s) 428
BtsCI GGATG 9 cut(s) 572, 1004, 1148, 1356, 2650, 2840, 3142, 3241, 3322
BtsI GCAGTG 2 cut(s) 1456, 2985
BtsIMutI CAGTG 7 cut(s) 850, 994, 1456, 2619, 2690, 2985, 3434
Cac8I GCNNGC 3 cut(s) 3034, 3063, 3320
CaiI CAGNNNCTG 1 cut(s) 2618
CciI TCATGA 1 cut(s) 1750
CfoI GCGC 1 cut(s) 3310
Cfr13I GGNCC 6 cut(s) 529, 1352, 1496, 1856, 2216, 3244
CseI GACGC 2 cut(s) 2122, 2569
Csp6I GTAC 7 cut(s) 4, 257, 342, 1430, 2150, 2264, 2313
CspCI CAANNNNNGTGG 2 cut(s) 1998, 2033
CviQI GTAC 7 cut(s) 4, 257, 342, 1430, 2150, 2264, 2313
DraI TTTAAA 1 cut(s) 804
Eam1104I CTCTTC 6 cut(s) 93, 639, 1049, 1265, 2226, 2658
EarI CTCTTC 6 cut(s) 93, 639, 1049, 1265, 2226, 2658
Eco105I TACGTA 1 cut(s) 3407
Eco130I CCWWGG 1 cut(s) 2967
Eco147I AGGCCT 1 cut(s) 2966
Eco32I GATATC 1 cut(s) 30
Eco47I GGWCC 4 cut(s) 529, 1496, 2216, 3244
Eco57I CTGAAG 5 cut(s) 147, 663, 1174, 1599, 3168
Eco81I CCTNAGG 1 cut(s) 786
Eco91I GGTNACC 1 cut(s) 1301
EcoO109I RGGNCCY 2 cut(s) 1856, 2216
EcoO65I GGTNACC 1 cut(s) 1301
EcoRII CCWGG 1 cut(s) 2790
EcoRV GATATC 1 cut(s) 30
EcoT14I CCWWGG 1 cut(s) 2967
EcoT22I ATGCAT 1 cut(s) 2463
ErhI CCWWGG 1 cut(s) 2967
Esp3I CGTCTC 2 cut(s) 1262, 2105
FalI AAGNNNNNCTT 2 cut(s) 2205, 2237
FaqI GGGAC 1 cut(s) 1674
FauI CCCGC 2 cut(s) 1368, 1687
FauNDI CATATG 1 cut(s) 3040
FblI GTMKAC 1 cut(s) 2077
Fnu4HI GCNGC 2 cut(s) 1447, 2287
FokI GGATG 9 cut(s) 559, 991, 1135, 1343, 2657, 2847, 3129, 3248, 3309
Fsp4HI GCNGC 2 cut(s) 1447, 2287
FspBI CTAG 5 cut(s) 1757, 1938, 1946, 3212, 3327
GlaI GCGC 1 cut(s) 3309
GluI GCNGC 2 cut(s) 1447, 2287
GsaI CCCAGC 1 cut(s) 604
HaeIII GGCC 4 cut(s) 23, 1353, 1857, 2966
HapII CCGG 2 cut(s) 2710, 2920
HgaI GACGC 2 cut(s) 2122, 2569
HhaI GCGC 1 cut(s) 3310
Hin6I GCGC 1 cut(s) 3308
HinP1I GCGC 1 cut(s) 3308
HincII GTYRAC 2 cut(s) 1563, 2191
HindII GTYRAC 2 cut(s) 1563, 2191
HindIII AAGCTT 2 cut(s) 1510, 2723
HpaII CCGG 2 cut(s) 2710, 2920
HphI GGTGA 6 cut(s) 593, 1025, 2353, 2860, 2909, 3434
Hpy166II GTNNAC 8 cut(s) 6, 1339, 1375, 1454, 1563, 2078, 2191, 2917
Hpy8I GTNNAC 8 cut(s) 6, 1339, 1375, 1454, 1563, 2078, 2191, 2917
Hpy99I CGWCG 1 cut(s) 2900
HpyAV CCTTC 8 cut(s) 379, 1049, 1544, 2063, 2159, 2207, 2375, 2393
HpyCH4III ACNGT 2 cut(s) 2614, 3422
HpyCH4IV ACGT 4 cut(s) 108, 427, 2898, 3406
HpyF10VI GCNNNNNNNGC 3 cut(s) 970, 3212, 3265
HpySE526I ACGT 4 cut(s) 108, 427, 2898, 3406
HspAI GCGC 1 cut(s) 3308
LmnI GCTCC 1 cut(s) 2254
Lsp1109I GCAGC 1 cut(s) 1458
LweI GCATC 5 cut(s) 2443, 2565, 3151, 3277, 3331
MaeI CTAG 5 cut(s) 1757, 1938, 1946, 3212, 3327
MaeII ACGT 4 cut(s) 108, 427, 2898, 3406
MaeIII GTNAC 8 cut(s) 104, 470, 653, 941, 1085, 1301, 2054, 3207
MfeI CAATTG 5 cut(s) 1296, 1673, 2403, 2910, 3228
MflI RGATCY 5 cut(s) 727, 1159, 1231, 1759, 3439
MhlI GDGCHC 1 cut(s) 2692
MlyI GAGTC 4 cut(s) 1328, 1449, 1548, 3002
MmeI TCCRAC 3 cut(s) 703, 3287, 3368
Mph1103I ATGCAT 1 cut(s) 2463
MroXI GAANNNNTTC 5 cut(s) 138, 1468, 1799, 1813, 2004
MseI TTAA 9 cut(s) 659, 803, 1091, 1154, 1979, 2051, 2118, 2859, 3446
MslI CAYNNNNRTG 1 cut(s) 2612
MspCI CTTAAG 1 cut(s) 1153
MspI CCGG 2 cut(s) 2710, 2920
MspR9I CCNGG 2 cut(s) 2792, 2921
MunI CAATTG 5 cut(s) 1296, 1673, 2403, 2910, 3228
MvaI CCWGG 1 cut(s) 2792
MwoI GCNNNNNNNGC 3 cut(s) 970, 3212, 3265
NciI CCSGG 1 cut(s) 2921
NdeI CATATG 1 cut(s) 3040
NlaIV GGNNCC 4 cut(s) 223, 1354, 1951, 3441
NmeAIII GCCGAG 1 cut(s) 2154
NmuCI GTSAC 1 cut(s) 104
NsiI ATGCAT 1 cut(s) 2463
NspI RCATGY 1 cut(s) 2461
NspV TTCGAA 2 cut(s) 446, 1263
PagI TCATGA 1 cut(s) 1750
PceI AGGCCT 1 cut(s) 2966
PdmI GAANNNNTTC 5 cut(s) 138, 1468, 1799, 1813, 2004
PfeI GAWTC 7 cut(s) 547, 979, 1789, 1800, 2543, 2670, 3001
PkrI GCNGC 2 cut(s) 1448, 2288
PleI GAGTC 4 cut(s) 1327, 1449, 1547, 3002
PpsI GAGTC 4 cut(s) 1327, 1449, 1547, 3002
Ppu21I YACGTR 1 cut(s) 3407
PpuMI RGGWCCY 1 cut(s) 2216
Psp5II RGGWCCY 1 cut(s) 2216
Psp6I CCWGG 1 cut(s) 2790
PspEI GGTNACC 1 cut(s) 1301
PspFI CCCAGC 1 cut(s) 600
PspGI CCWGG 1 cut(s) 2790
PspN4I GGNNCC 4 cut(s) 223, 1354, 1951, 3441
PspPI GGNCC 6 cut(s) 529, 1352, 1496, 1856, 2216, 3244
PspPPI RGGWCCY 1 cut(s) 2216
PstNI CAGNNNCTG 1 cut(s) 2618
PsuI RGATCY 5 cut(s) 727, 1159, 1231, 1759, 3439
RsaI GTAC 7 cut(s) 5, 258, 343, 1431, 2151, 2265, 2314
RsaNI GTAC 7 cut(s) 4, 257, 342, 1430, 2150, 2264, 2313
RseI CAYNNNNRTG 1 cut(s) 2612
SaqAI TTAA 9 cut(s) 659, 803, 1091, 1154, 1979, 2051, 2118, 2859, 3446
SatI GCNGC 2 cut(s) 1447, 2287
Sau96I GGNCC 6 cut(s) 529, 1352, 1496, 1856, 2216, 3244
SchI GAGTC 4 cut(s) 1328, 1449, 1548, 3002
ScrFI CCNGG 2 cut(s) 2792, 2921
SduI GDGCHC 1 cut(s) 2692
SfaNI GCATC 5 cut(s) 2443, 2565, 3151, 3277, 3331
SfuI TTCGAA 2 cut(s) 446, 1263
SinI GGWCC 4 cut(s) 529, 1496, 2216, 3244
SmiMI CAYNNNNRTG 1 cut(s) 2612
SmlI CTYRAG 2 cut(s) 1153, 2323
SmoI CTYRAG 2 cut(s) 1153, 2323
SnaBI TACGTA 1 cut(s) 3407
SseBI AGGCCT 1 cut(s) 2966
SsiI CCGC 4 cut(s) 1361, 1694, 2286, 3332
SspI AATATT 3 cut(s) 1441, 2293, 2854
SspMI CTAG 5 cut(s) 1757, 1938, 1946, 3212, 3327
StuI AGGCCT 1 cut(s) 2966
StyD4I CCNGG 2 cut(s) 2790, 2919
StyI CCWWGG 1 cut(s) 2967
TaaI ACNGT 2 cut(s) 2614, 3422
TaiI ACGT 4 cut(s) 111, 430, 2901, 3409
TaqI TCGA 5 cut(s) 311, 446, 1263, 2649, 3004
TaqII GACCGA 2 cut(s) 546, 2546
TatI WGTACW 2 cut(s) 3, 2263
TauI GCSGC 1 cut(s) 2289
TfiI GAWTC 7 cut(s) 547, 979, 1789, 1800, 2543, 2670, 3001
Tru1I TTAA 9 cut(s) 659, 803, 1091, 1154, 1979, 2051, 2118, 2859, 3446
Tru9I TTAA 9 cut(s) 659, 803, 1091, 1154, 1979, 2051, 2118, 2859, 3446
TscAI CASTG 7 cut(s) 850, 994, 1456, 2619, 2697, 2992, 3441
TseFI GTSAC 1 cut(s) 104
TseI GCWGC 1 cut(s) 1446
Tsp45I GTSAC 1 cut(s) 104
TspGWI ACGGA 1 cut(s) 1244
TspRI CASTG 7 cut(s) 850, 994, 1456, 2619, 2697, 2992, 3441
Vha464I CTTAAG 1 cut(s) 1153
VpaK11BI GGWCC 4 cut(s) 529, 1496, 2216, 3244
XapI RAATTY 9 cut(s) 241, 1384, 1871, 1919, 1975, 2004, 2488, 2799, 2950
XceI RCATGY 1 cut(s) 2461
XmiI GTMKAC 1 cut(s) 2077
XmnI GAANNNNTTC 5 cut(s) 138, 1468, 1799, 1813, 2004
XspI CTAG 5 cut(s) 1757, 1938, 1946, 3212, 3327
Zsp2I ATGCAT 1 cut(s) 2463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.