MD04G1039700.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000011
Physical Location & Seq
Forward (+)
4355861 .. 4359100
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1039700.v1.1.491

Sequence Viewer

Length: 3084 bp
ATGACATTTCTTTATATGCTCCTGCTGCTGTCCGCATTCCCACTGATCAAAACGACATCTATATCTCCAAGAAAACAAGCTGAATCGCTCATCAAATGGAAGGACGACTGGTCTTCATCATCATCGCCACCTTCGCTACTCAATTCATGGTCCCTCACCAACCTCAACAGCCTCTGCAACTGGACTGCCATTTCCTGCTCCAAAACCAGAACAGTCTCCAAAATAGACCTCTCCAATATGCAAATTCTCGGAACACTGTCCCTCTTCGACTTTCCCTTATTTCCAAATCTCACACACTTCAATCTAAATGGCAACAATTTCGTAGGGCGTATACCGCATGCCATTGGAAATCTCTCCAGGCTCACATCTTTGGACTTGGGCAACAACTTTTTTAATCATCAAATTCCATCGGAGATTGACGAGGTAACAGAGCTTCAGTATCTAAATCTCCGCAACAACAGTCTCTCTGGTACCATCCCTTATCAACTGAGCAATCTCCAAAAGGTATGGTACATGGACCTTGGATTAAACTATTTTTTCTCTGCTGATCAAGATTGGTCTCAATGCCGGAACTTGACGTTCCTCGACTTGTCTCAAAATAATTTGATTGGCAAAATTCCACCTTCGATAGGCCAACTTAGAAAGCTCCAGTACCTTGATCTTTCATACAACTCCTTAGACTCTTCTATCCATTCTGAGCTTGGTCTTTGTACAAACCTCACCCACTTGAGTTTAGCTAATAACCGATTCTCTGGCACGATTCCGGACAATATAGGTTTGATTTCTGGTCTTCAACGTGTTGACCTGAGTATAAATCTTCTGGAAGGGAAAATTCCATCCTCTGTAGGCCAACTCAGGGAGCTCCAGTACCTTGATCTTTCATCCAACTCCTTAAACTCAACAATCCCTTCTGAACTTGTTCTTTGTACAAACCTCACCTACTTGTACTTGTCTTCCAATAAACTCAATGGGGAACTGCCTCTTTCCTTGTCCAATCTGAACAACCTCGTCGAATTGGCTGTAGATAATAACCGATTCTATGGCACGATTCCACCTTCGATAGGCCAACTCAGGGATCTCCAGTACCTTAATCTTTCATACAACTCCTTAAACTCTTCCATCCCTTCTGAGCTTGGTCTTTGTACAAACCTCACCCACTTGTCCCTGGCTTCCAATAAACTAAACGGGGAACTGCCTCTGTCCTTGTCCAATTTGAACAACCTCGTCGAATTGGGTTTAGCAAATAACCAATTCTCTGGCACGATTTCGGACAATATAGGTTTGATTTCTGGTCTTCAACATATTGACCTGGGTATGAATCTTCTGGAAGGGGAAATTCCACTCTCTATAGGCCAACTCAGGGAGCTCCAGTACCTAAATCTTTCATACAACTCCTTAAACTCATCAATCCCTTCTGAACTTAGTCTTTGTACAAACCTCAACCGCTTGTCCTTGTCTTCCAATAAACTCAACGGGGAACTGCCTTTGTCCTTGTCCAATCTGAACAACCTCGTCGAATTGGGTTTAGATAATAATCTATTTACTGGTCAAATCCTTCCTTCTCTGGTCTCCAATTGGATTAATATGGAATCTTTGCAACTTCAGTCCAATGAACTCAGTGGGGAGATTCCGACGGAAGTTGGAAATATGAGCTTTCTGTTGACGCTCAATCTAAGTAGGAACCACTTGACAGGAGTGATCCCTCAGACTCTAGTCAATTTAGCTCAGCTTGAGCTGCTCGATTTGTCACACAACCATCTTTCAGGGCAAATCCCATCACTTCTCAACATGTTTTTTCTTCGTGACTTGGATTTTTCTTATAACAACTTGACTGGCCCAATCCCAGGCATTTTCCAATGGGCACCAGCAAATGCTTTTGTTGGAAACTCTGGCTTGTGTGGGGAGGTTGTAAATATTATATGCGATTCCCCCATCAGAAATTCAAAAAAGAATAGCAGAAGAGTTCTAATTGGTGTCCTTGTACCTGTTTGTCTAATTGTTGTCCTTGTACCTGTTTGTGGTTTATTAATGGTTACAAGTGTCATTGCTCTTATGTTCCGTAAGAAACCCAGTCTTGTTCGGAACAAAGTCAACACTTCTGAAAACTTTGAGAGTTTGGAGTCAATGATATTGCAAGAGGAAGTAAAGTTTACGTTTGCGGAAGTTGTGAAGGCTGTAGATGACTTTCATGACAAGTACTGCATTGGGACAGGAGGGTTTGGAAGGGTTTACAAGGCAGAGTTGCAATCAGGCCAAGTTGTTGCAGTTAAAAGGCTTAACATGTCAGACTCTAATGATATTCCAGCAATCAATCTCCATAGCTTTCAAAATGAAATCCGAACTTTGACAAGCATCCGGCACCGGAACATCATAAGGCTCTATGGCTTCTGTTCAAGAAGGGGGGGTTGCATATTCCTGCTTTATGAATACTTAGAGAGAGGAAGCCTGGGAAAAGCTTTGTATGGAGTTGAAGGTGTTAATGAACTTGGCTGGGCTACTAGAGTCAAAATTGTGCAAGGACTTGCTCATGCACTTTCTTACTTGCACCATGATTGCTCTCCACCAATTGTGCACCGTGACATAACCGTCAACAATGTATTGCTTGAGTCTGATTTCGAGGTTCGTCTCTCAGATTTCGGAATAGCCAGGTTATTGAGTACTGATTCATCCAACTGGACAGATATTGCTGGTTCGTTTGGCTACATAGCACCAGAGCTTGCATACACTATGCGAGTCACGGATAAATGTGATGTATATAGCTTTGGAGTGGTGGCGCTCGAAGTCATGATGGGAAGGCACCCAGGGGATATGCTAGAGTCCCAGCTACAAGAATCATCAAAATCAAGGAGGGACAATGTAGAATTGCTGCTGAAAGATTTGTTAGACCAAAGGTTGGAGCCGCCAACCAACGAATCTGCAAAGGCAGTGGTGCTTGTGGTGACAATGGCCTTGGCCTGTATACGAACGCGTCCTGCGTCCAGACCCACAATGTTATTTGCGGCACAAAAACTCTCAGCTCAAACCCTGCCTTGCCTACCTGAACCATTTGGTATGTTGACAATCAACAAGCTAATGGCACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1028

Amino Acids

113.73

Weight (kDa)

5.71

Isoelectric Point (pI)

37.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 95 - 155 4.6e-06 Leucine rich repeat
LRR_8 PF13855 190 - 250 9.3e-07 Leucine rich repeat
LRR_4 PF12799 191 - 227 2.4e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 263 - 322 3.7e-08 Leucine rich repeat
LRR_14 PF23598 277 - 341 7.3e-06 Leucine-rich repeat region
LRR_8 PF13855 335 - 394 1e-07 Leucine rich repeat
LRR_8 PF13855 528 - 587 1.5e-08 Leucine rich repeat
Pkinase PF00069 730 - 997 3e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 734 - 998 2.2e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1821
AasI GACNNNNNNGTC 1 cut(s) 2585
Acc65I GGTACC 1 cut(s) 470
AccB1I GGYRCC 4 cut(s) 470, 1861, 2358, 2796
AccB7I CCANNNNNTGG 1 cut(s) 2893
AccI GTMKAC 2 cut(s) 331, 2959
AccII CGCG 1 cut(s) 2968
AccIII TCCGGA 1 cut(s) 763
AciI CCGC 7 cut(s) 33, 335, 451, 1444, 2159, 2900, 2999
AclWI GGATC 2 cut(s) 1083, 1693
AcsI RAATTY 6 cut(s) 243, 402, 615, 831, 1335, 1939
AcuI CTGAAG 2 cut(s) 419, 1586
AfiI CCNNNNNNNGG 8 cut(s) 629, 856, 1061, 1072, 1360, 1844, 2018, 2893
AflIII ACRYGT 4 cut(s) 796, 1788, 2280, 2966
AgsI TTSAA 8 cut(s) 301, 794, 1216, 1298, 1944, 2327, 2394, 2471
AhdI GACNNNNNGTC 1 cut(s) 109
AjnI CCWGG 7 cut(s) 356, 1164, 1308, 1843, 2445, 2645, 2800
Alw21I GWGCWC 3 cut(s) 864, 1368, 2574
Alw26I GTCTC 6 cut(s) 220, 467, 564, 597, 1573, 2630
Alw44I GTGCAC 1 cut(s) 2570
AlwI GGATC 2 cut(s) 1083, 1693
AlwNI CAGNNNCTG 1 cut(s) 174
Aor13HI TCCGGA 1 cut(s) 763
AoxI GGCC 8 cut(s) 631, 847, 1063, 1351, 1834, 2251, 2946, 2952
ApaLI GTGCAC 1 cut(s) 2570
ApeKI GCWGC 3 cut(s) 25, 1735, 2866
ApoI RAATTY 6 cut(s) 243, 402, 615, 831, 1335, 1939
AseI ATTAAT 2 cut(s) 1581, 2027
Asp700I GAANNNNTTC 1 cut(s) 918
Asp718I GGTACC 1 cut(s) 470
AspLEI GCGC 1 cut(s) 2776
AspS9I GGNCC 3 cut(s) 150, 517, 1835
AsuHPI GGTGA 5 cut(s) 148, 712, 928, 1144, 2950
AvaII GGWCC 2 cut(s) 150, 517
BaeGI GKGCMC 2 cut(s) 1864, 2574
BanI GGYRCC 4 cut(s) 470, 1861, 2358, 2796
BanII GRGCYC 2 cut(s) 864, 1368
BarI GAAGNNNNNNTAC 2 cut(s) 417, 449
BbsI GAAGAC 5 cut(s) 105, 782, 945, 1286, 1449
Bbv12I GWGCWC 3 cut(s) 864, 1368, 2574
BbvI GCAGC 3 cut(s) 12, 1722, 2853
BccI CCATC 8 cut(s) 415, 482, 844, 1127, 1764, 1783, 1940, 2782
BcgI CGANNNNNNTGC 2 cut(s) 301, 335
BciT130I CCWGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
BclI TGATCA 2 cut(s) 45, 547
BcoDI GTCTC 6 cut(s) 220, 467, 564, 597, 1573, 2630
BfaI CTAG 3 cut(s) 1712, 2499, 2813
BfmI CTRYAG 4 cut(s) 843, 1020, 1347, 2175
BfoI RGCGCY 1 cut(s) 2777
BisI GCNGC 5 cut(s) 26, 1736, 2867, 2900, 3000
BlpI GCTNAGC 1 cut(s) 1725
BlsI GCNGC 5 cut(s) 27, 1737, 2868, 2901, 3001
BmcAI AGTACT 2 cut(s) 2198, 2659
Bme1390I CCNGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
Bme18I GGWCC 2 cut(s) 150, 517
BmeRI GACNNNNNGTC 1 cut(s) 109
BmgT120I GGNCC 3 cut(s) 150, 517, 1835
BmiI GGNNCC 7 cut(s) 152, 472, 1682, 1863, 2360, 2798, 2898
BmrFI CCNGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
BmrI ACTGGG 1 cut(s) 2064
BmsI GCATC 1 cut(s) 2361
BmuI ACTGGG 1 cut(s) 2064
BoxI GACNNNNGTC 1 cut(s) 1712
BpiI GAAGAC 5 cut(s) 105, 782, 945, 1286, 1449
BpmI CTGGAG 5 cut(s) 340, 632, 848, 1064, 1352
Bpu1102I GCTNAGC 1 cut(s) 1725
BpuEI CTTGAG 3 cut(s) 748, 1751, 2624
BsaBI GATNNNNATC 1 cut(s) 1533
BsaI GGTCTC 2 cut(s) 564, 1573
BsaJI CCNNGG 8 cut(s) 520, 1164, 1309, 1843, 2446, 2800, 2801, 2949
BsaWI WCCGGW 2 cut(s) 763, 2361
BsaXI ACNNNNNCTCC 4 cut(s) 851, 881, 1355, 1385
Bsc4I CCNNNNNNNGG 8 cut(s) 629, 856, 1061, 1072, 1360, 1844, 2018, 2893
Bse3DI GCAATG 1 cut(s) 2043
Bse8I GATNNNNATC 1 cut(s) 1533
BseAI TCCGGA 1 cut(s) 763
BseBI CCWGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
BseDI CCNNGG 8 cut(s) 520, 1164, 1309, 1843, 2446, 2800, 2801, 2949
BseGI GGATG 6 cut(s) 474, 836, 881, 1119, 2352, 2666
BseJI GATNNNNATC 1 cut(s) 1533
BseLI CCNNNNNNNGG 8 cut(s) 629, 856, 1061, 1072, 1360, 1844, 2018, 2893
BseMI GCAATG 1 cut(s) 2043
BseSI GKGCMC 2 cut(s) 1864, 2574
BseXI GCAGC 3 cut(s) 12, 1722, 2853
BseYI CCCAGC 2 cut(s) 2490, 2820
Bsh1236I CGCG 1 cut(s) 2968
BshFI GGCC 8 cut(s) 633, 849, 1065, 1353, 1836, 2253, 2948, 2954
BshNI GGYRCC 4 cut(s) 470, 1861, 2358, 2796
BsiHKAI GWGCWC 3 cut(s) 864, 1368, 2574
BsiSI CCGG 4 cut(s) 568, 764, 2356, 2362
BslFI GGGAC 6 cut(s) 136, 244, 1147, 2221, 2803, 2864
BslI CCNNNNNNNGG 8 cut(s) 629, 856, 1061, 1072, 1360, 1844, 2018, 2893
BsmAI GTCTC 6 cut(s) 220, 467, 564, 597, 1573, 2630
BsmBI CGTCTC 1 cut(s) 2630
BsmFI GGGAC 6 cut(s) 136, 244, 1147, 2221, 2803, 2864
BsmI GAATGC 1 cut(s) 35
BsnI GGCC 8 cut(s) 633, 849, 1065, 1353, 1836, 2253, 2948, 2954
Bso31I GGTCTC 2 cut(s) 564, 1573
Bsp1286I GDGCHC 4 cut(s) 864, 1368, 1864, 2574
Bsp13I TCCGGA 1 cut(s) 763
Bsp1407I TGTACA 4 cut(s) 710, 926, 1142, 1430
Bsp143I GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
Bsp1720I GCTNAGC 1 cut(s) 1725
BspACI CCGC 7 cut(s) 33, 335, 451, 1444, 2159, 2900, 2999
BspANI GGCC 8 cut(s) 633, 849, 1065, 1353, 1836, 2253, 2948, 2954
BspEI TCCGGA 1 cut(s) 763
BspFNI CGCG 1 cut(s) 2968
BspHI TCATGA 2 cut(s) 2188, 2784
BspLI GGNNCC 7 cut(s) 152, 472, 1682, 1863, 2360, 2798, 2898
BspPI GGATC 2 cut(s) 1083, 1693
BspT107I GGYRCC 4 cut(s) 470, 1861, 2358, 2796
BspTNI GGTCTC 2 cut(s) 564, 1573
BsrDI GCAATG 1 cut(s) 2043
BsrGI TGTACA 4 cut(s) 710, 926, 1142, 1430
BssECI CCNNGG 8 cut(s) 520, 1164, 1309, 1843, 2446, 2800, 2801, 2949
BssMI GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
BssNAI GTATAC 2 cut(s) 332, 2960
BssT1I CCWWGG 2 cut(s) 520, 2949
Bst1107I GTATAC 2 cut(s) 332, 2960
Bst2UI CCWGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
Bst4CI ACNGT 5 cut(s) 214, 258, 461, 2576, 2587
Bst6I CTCTTC 4 cut(s) 269, 688, 1120, 1954
BstAUI TGTACA 4 cut(s) 710, 926, 1142, 1430
BstC8I GCNNGC 2 cut(s) 339, 2718
BstENI CCTNNNNNAGG 2 cut(s) 627, 1059
BstF5I GGATG 6 cut(s) 474, 836, 881, 1119, 2352, 2666
BstFNI CGCG 1 cut(s) 2968
BstH2I RGCGCY 1 cut(s) 2777
BstHHI GCGC 1 cut(s) 2776
BstKTI GATC 6 cut(s) 48, 550, 661, 877, 1078, 1701
BstMAI GTCTC 6 cut(s) 220, 467, 564, 597, 1573, 2630
BstMBI GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
BstMWI GCNNNNNNNGC 4 cut(s) 25, 133, 334, 1735
BstNI CCWGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
BstNSI RCATGY 3 cut(s) 341, 1792, 2284
BstPAI GACNNNNGTC 1 cut(s) 1712
BstSCI CCNGG 7 cut(s) 356, 1164, 1308, 1843, 2445, 2645, 2800
BstSFI CTRYAG 4 cut(s) 843, 1020, 1347, 2175
BstSLI GKGCMC 2 cut(s) 1864, 2574
BstUI CGCG 1 cut(s) 2968
BstV1I GCAGC 3 cut(s) 12, 1722, 2853
BstV2I GAAGAC 5 cut(s) 105, 782, 945, 1286, 1449
BstX2I RGATCY 1 cut(s) 1075
BstXI CCANNNNNNTGG 1 cut(s) 1256
BstYI RGATCY 1 cut(s) 1075
BstZ17I GTATAC 2 cut(s) 332, 2960
BsuRI GGCC 8 cut(s) 633, 849, 1065, 1353, 1836, 2253, 2948, 2954
BtgZI GCGATG 1 cut(s) 108
BtsCI GGATG 6 cut(s) 474, 836, 881, 1119, 2352, 2666
BtsI GCAGTG 1 cut(s) 2931
BtsIMutI CAGTG 4 cut(s) 41, 254, 1624, 2931
Cac8I GCNNGC 2 cut(s) 339, 2718
CaiI CAGNNNCTG 1 cut(s) 174
CciI TCATGA 2 cut(s) 2188, 2784
CfoI GCGC 1 cut(s) 2776
Cfr13I GGNCC 3 cut(s) 150, 517, 1835
CseI GACGC 3 cut(s) 1672, 2957, 2964
CspCI CAANNNNNGTGG 2 cut(s) 2907, 2942
CviAII CATG 9 cut(s) 147, 338, 514, 1789, 2189, 2281, 2528, 2549, 2785
DpnI GATC 6 cut(s) 47, 549, 660, 876, 1077, 1700
DpnII GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
DrdI GACNNNNNNGTC 1 cut(s) 2585
DriI GACNNNNNGTC 1 cut(s) 109
DseDI GACNNNNNNGTC 1 cut(s) 2585
Eam1104I CTCTTC 4 cut(s) 269, 688, 1120, 1954
Eam1105I GACNNNNNGTC 1 cut(s) 109
EarI CTCTTC 4 cut(s) 269, 688, 1120, 1954
Ecl136II GAGCTC 2 cut(s) 862, 1366
Eco130I CCWWGG 2 cut(s) 520, 2949
Eco24I GRGCYC 2 cut(s) 864, 1368
Eco31I GGTCTC 2 cut(s) 564, 1573
Eco47I GGWCC 2 cut(s) 150, 517
Eco53kI GAGCTC 2 cut(s) 862, 1366
Eco57I CTGAAG 2 cut(s) 419, 1586
EcoICRI GAGCTC 2 cut(s) 862, 1366
EcoNI CCTNNNNNAGG 2 cut(s) 627, 1059
EcoRII CCWGG 7 cut(s) 356, 1164, 1308, 1843, 2445, 2645, 2800
EcoT14I CCWWGG 2 cut(s) 520, 2949
EcoT38I GRGCYC 2 cut(s) 864, 1368
ErhI CCWWGG 2 cut(s) 520, 2949
Esp3I CGTCTC 1 cut(s) 2630
FaeI CATG 9 cut(s) 150, 341, 517, 1792, 2192, 2284, 2531, 2552, 2788
FaqI GGGAC 6 cut(s) 136, 244, 1147, 2221, 2803, 2864
FatI CATG 9 cut(s) 146, 337, 513, 1788, 2188, 2280, 2527, 2548, 2784
FbaI TGATCA 2 cut(s) 45, 547
FblI GTMKAC 2 cut(s) 331, 2959
Fnu4HI GCNGC 5 cut(s) 26, 1736, 2867, 2900, 3000
FokI GGATG 6 cut(s) 461, 823, 868, 1106, 2339, 2653
FriOI GRGCYC 2 cut(s) 864, 1368
Fsp4HI GCNGC 5 cut(s) 26, 1736, 2867, 2900, 3000
FspBI CTAG 3 cut(s) 1712, 2499, 2813
GlaI GCGC 1 cut(s) 2775
GluI GCNGC 5 cut(s) 26, 1736, 2867, 2900, 3000
GsaI CCCAGC 2 cut(s) 2494, 2824
GsuI CTGGAG 5 cut(s) 340, 632, 848, 1064, 1352
HaeII RGCGCY 1 cut(s) 2777
HaeIII GGCC 8 cut(s) 633, 849, 1065, 1353, 1836, 2253, 2948, 2954
HapII CCGG 4 cut(s) 568, 764, 2356, 2362
HgaI GACGC 3 cut(s) 1672, 2957, 2964
HhaI GCGC 1 cut(s) 2776
Hin1II CATG 9 cut(s) 150, 341, 517, 1792, 2192, 2284, 2531, 2552, 2788
Hin6I GCGC 1 cut(s) 2774
HinP1I GCGC 1 cut(s) 2774
HincII GTYRAC 5 cut(s) 802, 1662, 2092, 2590, 3057
HindII GTYRAC 5 cut(s) 802, 1662, 2092, 2590, 3057
HindIII AAGCTT 1 cut(s) 2454
HpaII CCGG 4 cut(s) 568, 764, 2356, 2362
HphI GGTGA 5 cut(s) 148, 712, 928, 1144, 2950
Hpy188III TCNNGA 9 cut(s) 551, 764, 821, 1325, 1802, 2189, 2394, 2785, 2979
Hpy99I CGWCG 4 cut(s) 1013, 1229, 1517, 1636
HpyCH4III ACNGT 5 cut(s) 214, 258, 461, 2576, 2587
HpyCH4IV ACGT 3 cut(s) 578, 796, 2153
HpyF10VI GCNNNNNNNGC 4 cut(s) 25, 133, 334, 1735
HpySE526I ACGT 3 cut(s) 578, 796, 2153
Hsp92II CATG 9 cut(s) 150, 341, 517, 1792, 2192, 2284, 2531, 2552, 2788
HspAI GCGC 1 cut(s) 2774
Kpn2I TCCGGA 1 cut(s) 763
KpnI GGTACC 1 cut(s) 474
Ksp22I TGATCA 2 cut(s) 45, 547
Kzo9I GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
LmnI GCTCC 8 cut(s) 24, 203, 651, 859, 867, 1363, 1371, 2896
Lsp1109I GCAGC 3 cut(s) 12, 1722, 2853
LweI GCATC 1 cut(s) 2361
MaeI CTAG 3 cut(s) 1712, 2499, 2813
MaeII ACGT 3 cut(s) 578, 796, 2153
MaeIII GTNAC 7 cut(s) 424, 1746, 1802, 2032, 2576, 2734, 2938
MalI GATC 6 cut(s) 47, 549, 660, 876, 1077, 1700
MboI GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
MfeI CAATTG 2 cut(s) 1573, 2565
MflI RGATCY 1 cut(s) 1075
MhlI GDGCHC 4 cut(s) 864, 1368, 1864, 2574
MluI ACGCGT 1 cut(s) 2966
MlyI GAGTC 8 cut(s) 674, 1702, 2129, 2282, 2511, 2615, 2742, 2825
MmeI TCCRAC 6 cut(s) 909, 1621, 1655, 1861, 2694, 2874
MroI TCCGGA 1 cut(s) 763
MroXI GAANNNNTTC 1 cut(s) 918
MspI CCGG 4 cut(s) 568, 764, 2356, 2362
MspR9I CCNGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
MunI CAATTG 2 cut(s) 1573, 2565
Mva1269I GAATGC 1 cut(s) 35
MvaI CCWGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
MvnI CGCG 1 cut(s) 2968
MwoI GCNNNNNNNGC 4 cut(s) 25, 133, 334, 1735
NdeII GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
NlaIII CATG 9 cut(s) 150, 341, 517, 1792, 2192, 2284, 2531, 2552, 2788
NlaIV GGNNCC 7 cut(s) 152, 472, 1682, 1863, 2360, 2798, 2898
NmuCI GTSAC 5 cut(s) 1746, 1802, 2576, 2734, 2938
NspI RCATGY 3 cut(s) 341, 1792, 2284
PaeI GCATGC 1 cut(s) 341
PagI TCATGA 2 cut(s) 2188, 2784
PasI CCCWGGG 1 cut(s) 2801
PciI ACATGT 2 cut(s) 1788, 2280
PcsI WCGNNNNNNNCGW 1 cut(s) 2972
PctI GAATGC 1 cut(s) 35
PdmI GAANNNNTTC 1 cut(s) 918
PflMI CCANNNNNTGG 1 cut(s) 2893
PkrI GCNGC 5 cut(s) 27, 1737, 2868, 2901, 3001
PleI GAGTC 8 cut(s) 674, 1702, 2128, 2282, 2510, 2614, 2741, 2824
PpsI GAGTC 8 cut(s) 674, 1702, 2128, 2282, 2510, 2614, 2741, 2824
PscI ACATGT 2 cut(s) 1788, 2280
PshAI GACNNNNGTC 1 cut(s) 1712
PshBI ATTAAT 2 cut(s) 1581, 2027
PsiI TTATAA 1 cut(s) 1821
Psp124BI GAGCTC 2 cut(s) 864, 1368
Psp6I CCWGG 7 cut(s) 356, 1164, 1308, 1843, 2445, 2645, 2800
PspFI CCCAGC 2 cut(s) 2490, 2820
PspGI CCWGG 7 cut(s) 356, 1164, 1308, 1843, 2445, 2645, 2800
PspN4I GGNNCC 7 cut(s) 152, 472, 1682, 1863, 2360, 2798, 2898
PspPI GGNCC 3 cut(s) 150, 517, 1835
PstNI CAGNNNCTG 1 cut(s) 174
PsuI RGATCY 1 cut(s) 1075
SacI GAGCTC 2 cut(s) 864, 1368
SatI GCNGC 5 cut(s) 26, 1736, 2867, 2900, 3000
Sau3AI GATC 6 cut(s) 45, 547, 658, 874, 1075, 1698
Sau96I GGNCC 3 cut(s) 150, 517, 1835
ScaI AGTACT 2 cut(s) 2198, 2659
SchI GAGTC 8 cut(s) 674, 1702, 2129, 2282, 2511, 2615, 2742, 2825
ScrFI CCNGG 7 cut(s) 358, 1166, 1310, 1845, 2447, 2647, 2802
SduI GDGCHC 4 cut(s) 864, 1368, 1864, 2574
SfaNI GCATC 1 cut(s) 2361
SfcI CTRYAG 4 cut(s) 843, 1020, 1347, 2175
SinI GGWCC 2 cut(s) 150, 517
SmlI CTYRAG 3 cut(s) 727, 1730, 2603
SmoI CTYRAG 3 cut(s) 727, 1730, 2603
SphI GCATGC 1 cut(s) 341
SsiI CCGC 7 cut(s) 33, 335, 451, 1444, 2159, 2900, 2999
SspI AATATT 1 cut(s) 1915
SspMI CTAG 3 cut(s) 1712, 2499, 2813
SstI GAGCTC 2 cut(s) 864, 1368
StyD4I CCNGG 7 cut(s) 356, 1164, 1308, 1843, 2445, 2645, 2800
StyI CCWWGG 2 cut(s) 520, 2949
TaaI ACNGT 5 cut(s) 214, 258, 461, 2576, 2587
TaiI ACGT 3 cut(s) 581, 799, 2156
TatI WGTACW 7 cut(s) 710, 926, 945, 1142, 1430, 2196, 2657
TauI GCSGC 2 cut(s) 2902, 3002
TscAI CASTG 4 cut(s) 48, 261, 1624, 2931
TseFI GTSAC 5 cut(s) 1746, 1802, 2576, 2734, 2938
TseI GCWGC 3 cut(s) 25, 1735, 2866
Tsp45I GTSAC 5 cut(s) 1746, 1802, 2576, 2734, 2938
TspGWI ACGGA 3 cut(s) 1649, 2048, 2753
TspRI CASTG 4 cut(s) 48, 261, 1624, 2931
Van91I CCANNNNNTGG 1 cut(s) 2893
VneI GTGCAC 1 cut(s) 2570
VpaK11BI GGWCC 2 cut(s) 150, 517
VspI ATTAAT 2 cut(s) 1581, 2027
XagI CCTNNNNNAGG 2 cut(s) 627, 1059
XapI RAATTY 6 cut(s) 243, 402, 615, 831, 1335, 1939
XceI RCATGY 3 cut(s) 341, 1792, 2284
XcmI CCANNNNNNNNNTGG 1 cut(s) 698
XmiI GTMKAC 2 cut(s) 331, 2959
XmnI GAANNNNTTC 1 cut(s) 918
XspI CTAG 3 cut(s) 1712, 2499, 2813
ZrmI AGTACT 2 cut(s) 2198, 2659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.