MD09G1153100.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
12150483 .. 12152230
1748 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1153100.v1.1.491

Sequence Viewer

Length: 1311 bp
ATGAATCTGTCTCACAATGAGCTCTCTGGTTCCTTCCCATCCAGTTTTGGTAATATGTTACACTTGACTGCTATTGACGTATCCTACAATCAACTGGAGGGTCTTCTTCCGAACATCAAAGACTTCAACGAGGCTCCAGTCGAAGCTTTAGAGAATAGCAAGGGCTTTTGTTGTAATGCCACTGGCCTGAAGCCGTGCCAATCTACCATAAGAAACACGAAAAAGAACAATAATAACATCATTATAATTGCAGCCCTCATTTCAGGAATTCTGTTTCTTGGGTTCATTGTAGTTGGGATTCTCTCCATTCGGCGCCCGCACCAGACTGTAAGAGAACAGCAAATGCAAAGAGAAACACAAACAGAAAATCTCTTTACAATTTGGAGCTATGATGGAAGATTGATGTATGAGGACATCGTTGCAGCTACAGAGGAATTTGACTCTAAACATTGTGTAGGAGCAGGGGCCCATGCAAATGTTTATAAATCTAAGTTGCAAACAGGCCAGATTGTTGCAGTGAAGAAACTTCATACTCTGCAGGAGGGTAGGATAGCAAATCCGAAGGCTTTTAAGAGAGATTCATGCTCTCTCAGAAATCCGCCATCGCAACATTGTGAAGCTCTATGGCTTTTGCGCACATCCACGGCACTCATTCTTGGTTTACCAGTTTCTGGAAGGGGGAAGCTTAGAAGAAACAATGACAACGAAGCAACTATGTTTGAATGGATTTCAAGGATTAACCTTGTCAAAAGCGTGGCAAATGCTTTATCCTACATGCACCATGACTGCTTGCCTCCAATTGTTCACCGAGACATATCAAGCAAGAACATCTTGCTGGATTTGGAACATGCTGCTTACGTCTCTGATTTCGGCACAGCTAGAATTTTGAAGCCTGGCTCTTCCAATTGGACTTCATTTGCAGGCACATTTGGATACACTGCTCCAGAGTTTGCATACACAATGGAGGTGAATGAGAAATGTGATGTTTATAGCTTTGGAGTGTCAACTTTAGAAGTGATCATGGGAAAGCATCCGGGAGATCTCATGATCGCAGTTCTGTCCTCGACAACATCAACCGTGCTTAATACACTGCTGACGGATGTTTTGGAACAAAGACCTTCAACTCCAAGAGATCAAGTTGCAGACAAAGTGGCGTTTGTTGTGAAGATTGCTTTTTCATGCCTGCAAGCCAACCCACAATCTCGGCCAACCATGCAACAAGTTTCCCAGGAGCTAACAAATATTCCAAGGGCTTCTTTACCATTCTCATTTGATAAGATCACCTTGGGACATCTTGTGAACAATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

437

Amino Acids

48.28

Weight (kDa)

8.04

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 148 - 410 8.4e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 149 - 412 3.8e-26 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 245, 483
Acc16I TGCGCA 1 cut(s) 635
AccB1I GGYRCC 1 cut(s) 312
AccB7I CCANNNNNTGG 1 cut(s) 671
AciI CCGC 2 cut(s) 317, 599
AcoI YGGCCR 1 cut(s) 1205
AcsI RAATTY 3 cut(s) 267, 434, 882
AcuI CTGAAG 1 cut(s) 209
AcyI GRCGYC 1 cut(s) 313
AfiI CCNNNNNNNGG 1 cut(s) 671
AgsI TTSAA 5 cut(s) 127, 722, 732, 889, 1122
AjnI CCWGG 2 cut(s) 892, 1227
AluBI AGCT 9 cut(s) 22, 146, 387, 425, 620, 685, 878, 993, 1234
AluI AGCT 9 cut(s) 22, 146, 387, 425, 620, 685, 878, 993, 1234
Alw21I GWGCWC 1 cut(s) 24
Alw26I GTCTC 3 cut(s) 15, 804, 865
AlwNI CAGNNNCTG 1 cut(s) 671
AoxI GGCC 4 cut(s) 184, 465, 502, 1205
ApaI GGGCCC 1 cut(s) 469
ApeKI GCWGC 3 cut(s) 251, 422, 851
ApoI RAATTY 3 cut(s) 267, 434, 882
ArsI GACNNNNNNTTYG 2 cut(s) 1087, 1119
AspLEI GCGC 2 cut(s) 315, 636
AspS9I GGNCC 2 cut(s) 465, 466
AsuC2I CCSGG 1 cut(s) 1035
AsuHPI GGTGA 3 cut(s) 797, 979, 1273
BaeGI GKGCMC 1 cut(s) 469
BanI GGYRCC 1 cut(s) 312
BanII GRGCYC 2 cut(s) 24, 469
BbsI GAAGAC 1 cut(s) 95
Bbv12I GWGCWC 1 cut(s) 24
BbvI GCAGC 3 cut(s) 263, 434, 838
BccI CCATC 3 cut(s) 46, 386, 610
BceAI ACGGC 2 cut(s) 178, 660
BciT130I CCWGG 2 cut(s) 894, 1229
BciVI GTATCC 2 cut(s) 91, 926
BclI TGATCA 1 cut(s) 1017
BcnI CCSGG 1 cut(s) 1035
BcoDI GTCTC 3 cut(s) 15, 804, 865
BfaI CTAG 1 cut(s) 879
BfmI CTRYAG 2 cut(s) 426, 536
BfoI RGCGCY 1 cut(s) 316
BfuI GTATCC 2 cut(s) 91, 926
BglII AGATCT 1 cut(s) 1039
BisI GCNGC 3 cut(s) 252, 423, 852
BlsI GCNGC 3 cut(s) 253, 424, 853
Bme1390I CCNGG 3 cut(s) 894, 1035, 1229
BmgT120I GGNCC 2 cut(s) 465, 466
BmiI GGNNCC 5 cut(s) 31, 135, 314, 466, 467
BmrFI CCNGG 3 cut(s) 894, 1035, 1229
BmsI GCATC 1 cut(s) 1039
BpiI GAAGAC 1 cut(s) 95
BpmI CTGGAG 3 cut(s) 116, 120, 927
BpuMI CCSGG 1 cut(s) 1035
BsaHI GRCGYC 1 cut(s) 313
BsaJI CCNNGG 4 cut(s) 642, 1227, 1247, 1284
Bsc4I CCNNNNNNNGG 1 cut(s) 671
Bse1I ACTGG 5 cut(s) 42, 99, 137, 187, 665
BseBI CCWGG 2 cut(s) 894, 1229
BseDI CCNNGG 4 cut(s) 642, 1227, 1247, 1284
BseGI GGATG 4 cut(s) 38, 638, 1030, 1105
BseLI CCNNNNNNNGG 1 cut(s) 671
BseMII CTCAG 1 cut(s) 604
BseNI ACTGG 5 cut(s) 42, 99, 137, 187, 665
BseSI GKGCMC 1 cut(s) 469
BseXI GCAGC 3 cut(s) 263, 434, 838
BshFI GGCC 4 cut(s) 186, 467, 504, 1207
BshNI GGYRCC 1 cut(s) 312
BsiHKAI GWGCWC 1 cut(s) 24
BsiSI CCGG 1 cut(s) 1034
BslFI GGGAC 1 cut(s) 1302
BslI CCNNNNNNNGG 1 cut(s) 671
BsmAI GTCTC 3 cut(s) 15, 804, 865
BsmBI CGTCTC 1 cut(s) 865
BsmFI GGGAC 1 cut(s) 1302
BsnI GGCC 4 cut(s) 186, 467, 504, 1207
Bsp120I GGGCCC 1 cut(s) 465
Bsp1286I GDGCHC 2 cut(s) 24, 469
Bsp143I GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
BspACI CCGC 2 cut(s) 317, 599
BspANI GGCC 4 cut(s) 186, 467, 504, 1207
BspCNI CTCAG 1 cut(s) 603
BspHI TCATGA 1 cut(s) 1044
BspLI GGNNCC 5 cut(s) 31, 135, 314, 466, 467
BspMAI CTGCAG 1 cut(s) 540
BspQI GCTCTTC 1 cut(s) 904
BspT107I GGYRCC 1 cut(s) 312
BsrI ACTGG 5 cut(s) 42, 99, 137, 187, 665
BssECI CCNNGG 4 cut(s) 642, 1227, 1247, 1284
BssMI GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
BssNI GRCGYC 1 cut(s) 313
BssT1I CCWWGG 2 cut(s) 1247, 1284
Bst2UI CCWGG 2 cut(s) 894, 1229
Bst4CI ACNGT 2 cut(s) 328, 1078
Bst6I CTCTTC 1 cut(s) 904
BstACI GRCGYC 1 cut(s) 313
BstC8I GCNNGC 5 cut(s) 317, 791, 922, 1184, 1188
BstDEI CTNAG 3 cut(s) 489, 590, 686
BstDSI CCRYGG 1 cut(s) 642
BstF5I GGATG 4 cut(s) 38, 638, 1030, 1105
BstH2I RGCGCY 1 cut(s) 316
BstHHI GCGC 2 cut(s) 315, 636
BstKTI GATC 5 cut(s) 1020, 1042, 1050, 1135, 1281
BstMAI GTCTC 3 cut(s) 15, 804, 865
BstMBI GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
BstMWI GCNNNNNNNGC 1 cut(s) 1213
BstNI CCWGG 2 cut(s) 894, 1229
BstNSI RCATGY 2 cut(s) 778, 851
BstSCI CCNGG 3 cut(s) 892, 1033, 1227
BstSFI CTRYAG 2 cut(s) 426, 536
BstSLI GKGCMC 1 cut(s) 469
BstV1I GCAGC 3 cut(s) 263, 434, 838
BstV2I GAAGAC 1 cut(s) 95
BstX2I RGATCY 1 cut(s) 1039
BstYI RGATCY 1 cut(s) 1039
BsuI GTATCC 2 cut(s) 91, 926
BsuRI GGCC 4 cut(s) 186, 467, 504, 1207
BtgI CCRYGG 1 cut(s) 642
BtgZI GCGATG 1 cut(s) 588
BtsCI GGATG 4 cut(s) 38, 638, 1030, 1105
BtsI GCAGTG 3 cut(s) 522, 936, 1088
BtsIMutI CAGTG 4 cut(s) 180, 522, 936, 1088
Cac8I GCNNGC 5 cut(s) 317, 791, 922, 1184, 1188
CaiI CAGNNNCTG 1 cut(s) 671
CciI TCATGA 1 cut(s) 1044
CfoI GCGC 2 cut(s) 315, 636
Cfr13I GGNCC 2 cut(s) 465, 466
CviAII CATG 9 cut(s) 470, 582, 775, 782, 848, 1021, 1045, 1179, 1213
DdeI CTNAG 3 cut(s) 489, 590, 686
DinI GGCGCC 1 cut(s) 314
DpnI GATC 5 cut(s) 1019, 1041, 1049, 1134, 1280
DpnII GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
EaeI YGGCCR 1 cut(s) 1205
Eam1104I CTCTTC 1 cut(s) 904
EarI CTCTTC 1 cut(s) 904
EciI GGCGGA 1 cut(s) 588
Ecl136II GAGCTC 1 cut(s) 22
Eco130I CCWWGG 2 cut(s) 1247, 1284
Eco24I GRGCYC 2 cut(s) 24, 469
Eco53kI GAGCTC 1 cut(s) 22
Eco57I CTGAAG 1 cut(s) 209
EcoICRI GAGCTC 1 cut(s) 22
EcoO109I RGGNCCY 1 cut(s) 465
EcoRI GAATTC 1 cut(s) 267
EcoRII CCWGG 2 cut(s) 892, 1227
EcoT14I CCWWGG 2 cut(s) 1247, 1284
EcoT38I GRGCYC 2 cut(s) 24, 469
EgeI GGCGCC 1 cut(s) 314
EheI GGCGCC 1 cut(s) 314
ErhI CCWWGG 2 cut(s) 1247, 1284
Esp3I CGTCTC 1 cut(s) 865
FaeI CATG 9 cut(s) 473, 585, 778, 785, 851, 1024, 1048, 1182, 1216
FalI AAGNNNNNCTT 6 cut(s) 815, 847, 1240, 1272, 1268, 1300
FaqI GGGAC 1 cut(s) 1302
FatI CATG 9 cut(s) 469, 581, 774, 781, 847, 1020, 1044, 1178, 1212
FauI CCCGC 1 cut(s) 324
FbaI TGATCA 1 cut(s) 1017
Fnu4HI GCNGC 3 cut(s) 252, 423, 852
FokI GGATG 4 cut(s) 25, 625, 1017, 1112
FriOI GRGCYC 2 cut(s) 24, 469
Fsp4HI GCNGC 3 cut(s) 252, 423, 852
FspBI CTAG 1 cut(s) 879
FspI TGCGCA 1 cut(s) 635
GlaI GCGC 2 cut(s) 314, 635
GluI GCNGC 3 cut(s) 252, 423, 852
GsuI CTGGAG 3 cut(s) 116, 120, 927
HaeII RGCGCY 1 cut(s) 316
HaeIII GGCC 4 cut(s) 186, 467, 504, 1207
HapII CCGG 1 cut(s) 1034
HhaI GCGC 2 cut(s) 315, 636
Hin1I GRCGYC 1 cut(s) 313
Hin1II CATG 9 cut(s) 473, 585, 778, 785, 851, 1024, 1048, 1182, 1216
Hin6I GCGC 2 cut(s) 313, 634
HinP1I GCGC 2 cut(s) 313, 634
HincII GTYRAC 1 cut(s) 1005
HindII GTYRAC 1 cut(s) 1005
HindIII AAGCTT 2 cut(s) 144, 683
HinfI GANTC 4 cut(s) 4, 298, 440, 578
HpaII CCGG 1 cut(s) 1034
HphI GGTGA 3 cut(s) 797, 979, 1273
Hpy166II GTNNAC 4 cut(s) 662, 805, 1005, 1300
Hpy188I TCNGA 4 cut(s) 111, 561, 593, 865
Hpy188III TCNNGA 4 cut(s) 264, 672, 944, 1045
Hpy8I GTNNAC 4 cut(s) 662, 805, 1005, 1300
HpyAV CCTTC 4 cut(s) 43, 556, 669, 1128
HpyCH4III ACNGT 2 cut(s) 328, 1078
HpyCH4IV ACGT 2 cut(s) 78, 858
HpyF10VI GCNNNNNNNGC 1 cut(s) 1213
HpyF3I CTNAG 3 cut(s) 489, 590, 686
HpySE526I ACGT 2 cut(s) 78, 858
Hsp92I GRCGYC 1 cut(s) 313
Hsp92II CATG 9 cut(s) 473, 585, 778, 785, 851, 1024, 1048, 1182, 1216
HspAI GCGC 2 cut(s) 313, 634
KasI GGCGCC 1 cut(s) 312
Ksp22I TGATCA 1 cut(s) 1017
Kzo9I GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
LguI GCTCTTC 1 cut(s) 904
LmnI GCTCC 5 cut(s) 139, 384, 458, 946, 1231
Lsp1109I GCAGC 3 cut(s) 263, 434, 838
LweI GCATC 1 cut(s) 1039
MaeI CTAG 1 cut(s) 879
MaeII ACGT 2 cut(s) 78, 858
MaeIII GTNAC 1 cut(s) 57
MalI GATC 5 cut(s) 1019, 1041, 1049, 1134, 1280
MboI GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
MboII GAAGA 7 cut(s) 95, 98, 408, 532, 702, 891, 1177
MfeI CAATTG 2 cut(s) 798, 904
MflI RGATCY 1 cut(s) 1039
MhlI GDGCHC 2 cut(s) 24, 469
MluCI AATT 7 cut(s) 246, 267, 378, 434, 798, 882, 904
Mly113I GGCGCC 1 cut(s) 313
MlyI GAGTC 1 cut(s) 434
MnlI CCTC 9 cut(s) 91, 124, 266, 403, 424, 535, 804, 958, 1072
MseI TTAA 4 cut(s) 570, 738, 1083, 1309
MslI CAYNNNNRTG 1 cut(s) 474
MspI CCGG 1 cut(s) 1034
MspR9I CCNGG 3 cut(s) 894, 1035, 1229
MunI CAATTG 2 cut(s) 798, 904
MvaI CCWGG 2 cut(s) 894, 1229
MwoI GCNNNNNNNGC 1 cut(s) 1213
NarI GGCGCC 1 cut(s) 313
NciI CCSGG 1 cut(s) 1035
NdeII GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
NlaIII CATG 9 cut(s) 473, 585, 778, 785, 851, 1024, 1048, 1182, 1216
NlaIV GGNNCC 5 cut(s) 31, 135, 314, 466, 467
NmeAIII GCCGAG 1 cut(s) 1183
NsbI TGCGCA 1 cut(s) 635
NspI RCATGY 2 cut(s) 778, 851
PagI TCATGA 1 cut(s) 1044
PciSI GCTCTTC 1 cut(s) 904
PfeI GAWTC 3 cut(s) 4, 298, 578
PflMI CCANNNNNTGG 1 cut(s) 671
PfoI TCCNGGA 1 cut(s) 1033
PkrI GCNGC 3 cut(s) 253, 424, 853
PleI GAGTC 1 cut(s) 434
PluTI GGCGCC 1 cut(s) 316
PpsI GAGTC 1 cut(s) 434
PsiI TTATAA 2 cut(s) 245, 483
Psp124BI GAGCTC 1 cut(s) 24
Psp6I CCWGG 2 cut(s) 892, 1227
PspGI CCWGG 2 cut(s) 892, 1227
PspN4I GGNNCC 5 cut(s) 31, 135, 314, 466, 467
PspOMI GGGCCC 1 cut(s) 465
PspPI GGNCC 2 cut(s) 465, 466
PstI CTGCAG 1 cut(s) 540
PstNI CAGNNNCTG 1 cut(s) 671
PsuI RGATCY 1 cut(s) 1039
RseI CAYNNNNRTG 1 cut(s) 474
SacI GAGCTC 1 cut(s) 24
SapI GCTCTTC 1 cut(s) 904
SaqAI TTAA 4 cut(s) 570, 738, 1083, 1309
SatI GCNGC 3 cut(s) 252, 423, 852
Sau3AI GATC 5 cut(s) 1017, 1039, 1047, 1132, 1278
Sau96I GGNCC 2 cut(s) 465, 466
SchI GAGTC 1 cut(s) 434
ScrFI CCNGG 3 cut(s) 894, 1035, 1229
SduI GDGCHC 2 cut(s) 24, 469
SfaNI GCATC 1 cut(s) 1039
SfcI CTRYAG 2 cut(s) 426, 536
SfoI GGCGCC 1 cut(s) 314
SmiMI CAYNNNNRTG 1 cut(s) 474
Sse9I AATT 7 cut(s) 246, 267, 378, 434, 798, 882, 904
SsiI CCGC 2 cut(s) 317, 599
SspDI GGCGCC 1 cut(s) 312
SspI AATATT 1 cut(s) 1243
SspMI CTAG 1 cut(s) 879
SstI GAGCTC 1 cut(s) 24
StyD4I CCNGG 3 cut(s) 892, 1033, 1227
StyI CCWWGG 2 cut(s) 1247, 1284
TaaI ACNGT 2 cut(s) 328, 1078
TaiI ACGT 2 cut(s) 81, 861
TaqI TCGA 2 cut(s) 141, 1064
TasI AATT 7 cut(s) 246, 267, 378, 434, 798, 882, 904
TfiI GAWTC 3 cut(s) 4, 298, 578
Tru1I TTAA 4 cut(s) 570, 738, 1083, 1309
Tru9I TTAA 4 cut(s) 570, 738, 1083, 1309
TscAI CASTG 4 cut(s) 187, 522, 943, 1095
TseI GCWGC 3 cut(s) 251, 422, 851
TspDTI ATGAA 6 cut(s) 17, 274, 518, 570, 903, 1167
TspGWI ACGGA 1 cut(s) 1112
TspRI CASTG 4 cut(s) 187, 522, 943, 1095
Van91I CCANNNNNTGG 1 cut(s) 671
XapI RAATTY 3 cut(s) 267, 434, 882
XceI RCATGY 2 cut(s) 778, 851
XspI CTAG 1 cut(s) 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.