Rmu_sc0002973.1_g000004

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002973.1
Physical Location & Seq
Forward (+)
49050 .. 53591
4542 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002973.1_g000004.1.cds

Sequence Viewer

Length: 3813 bp
atgacatctttagcttttgaaaaagtaagccctctagtttactgtcttttcttgtatgttcacctactttcatcacaaaactactttcgacattttgcttatgctggttcaactactgaagcagaggctcttctcaaatggaaatccagctttctaaatcaaacctcccataataaccagctgaaggattggatttaccttcccaagactactgatacaaatgccaccaattcttccaacaaccccaaagaaaacgaaagcccatgcaattggactggtatttcatgcaatgaagctggaaatgtcacaaacataaccattgccagttcctgtatacaaggtatgctacatgaattttcattctcatctttcccttatctcgaatatcttgacctcagcttcaataaactctttgatatcatcccacctcaaatcagttccctctccaaactcctccatcttgacctttccagtaaccagttctccggaagaattccaccagaaattggtcttctaagaaatctcaggttgctatatctttatagaaatgatctttatgatgttattcctctttcgatagggaacctgaaatctttggtggatctagagttgagcaccaatcaactcagtggttcaattccggtaacattgggtgatctgaccaaccttaccactcttttactaggttcaaataatctctctggcaccattccaaaagagttagggaacctgaaatcattggtcgatttagagttgagcaccaatcgactcagtggttcaattccgacaacattgggtcatctgaccaaccttaccactctctatctattttcaaataatctttccgggactattccaaaagagctaggaaacttgaaatctttggtggatctagagttgagcaccaatcaactcaatggttcaattccgacaacattgggtcatctgaccaaccttaccactctctatctgttgtcaaataatctttccgggactattccaaaagagctaggaaacttgaaatctttggtggatctagagttgagcaccaatcaactcaatggttcaattccgacaacattgggtcatctgaccaaccttaccactctttatctcgattcaaatagcctttctggcaccattccaaaagagttagggaacttgaaatctttggtgaatctatccttgagcaccaatcacctctatggttcaattccgacgacattgggtgatctgaacaaccttaccactctttatctccattcaaatagcctttctggtaccattccaaaagagttagggaatctgaaatctttggcggatctatggttgtacaacaatcaactcagtggttcaattccgacaacactgggtgatctgaccaaccttaccactctctatctctattcaaataatcttgccgggaccattccaaaagagttaggaaacctgaaatctttggtgaatctatccttgagcaccaatcacctctatggttcaattccgacaacattgggtgatctgaccaaccttacatttttctatctctcttcaaataatctttctgggaccattccaaaagagttagggaacctgaaatccttggtgaggctatccttgagcattaatcaactcagtggttcaattccgacaacattgggtgacttgccaaacttgaaaatattaaggcttcgtgacaaccaactttccggccccattcctcaagagataggaaatatccaaaagttgataagcgtgcaattaaatggaaaccatttttcaggtcacttgccccaaaacatttgtcgaggtggatcacttgcatacttttctgcattttccaatcacctaagtggtccaatccccataagcttgaaaacctgtactagcttactcagagtccgtcttgaacagaaccaattgacaggtaacataactacagcctttggtgtttaccctagtctcaattttatagatttgagcaacaatcaactaaatggtgaaatcttaccaaattgggtattgtgcccaaatttaacaaccatacgaatagctggaaacaaacttactggctctataccagctgtggttggaaatgcaacccaaattcatgtgctcgatctttcttcaaatagtttagtcgggacaattccaaaggagcttgggggattatcctcaatgattgagttgaagttggacgacaatcaactttcaggacgtgtcccttcagagtttaagtcattgactaatctagaatatcttgatctctcagcaaacaaactcaatgattcaattccaagctttgtaggtgattttcgcaaattaaattacttgaatttgagcaacaaccagttcagtcaagtaattccatttcagttggggaagctaattcagttatcccaactagatttgagttttaacgcacttgaaggtcagataccatcagatattagtaacatgcacagtctggaaatacttaatatatcccacaacaatctttctggttccattccaacaagcatggaagacatgcatggactaacgtatgctgacgtatcctacaatcacttggaaggtccactgcccaacatcaaagtatttcaagctgcccctcaagaagcattgcaagggaacaagggcttgtgtggcaacacaacatatttgcaaccctgcaataaagaaagccgaaagaaggaccataaactcatacttctgatgatctttcttgttcttggagcacttgcacttcaagcctttatatttgcatttggagtaaaaagaaaaaagaagcatcagcatgtaggagaaaaagccaaagatgaaaaaatttctttttcgatattacagtttgatggaaagacgttgtatgaggaaattgtaagggcaacagaagattttaattccatgtattgcgtagggcaagggaaacagggaagtgtctacaaagcaactttgtcaaatgataacacagtagctgtaaagaaactccatctgttatgcactgatgacaagaatcttcaaaaagaattcttgaatgaaatcagggcactaactgagatgcgtcacagaaatattgtgaggctttatggtttctgttcacactggcgacactcatttttggtttatgagtatcttgaaaaaggtagtttggctacagtgttgagcaaagatgaggaagctaaagaactgggatggagtaaaagggtgaatatcatgaaaggtgtagcttatgccatgtgttacatgcaccatgatggcttgtcaccaattgtgcaccgggacatatcaagcaagaacattttgctggatgctgaatatgaggcatgtgtttcagattttggcattgcaaagttcttgaaccaagactcaaataattggactgcccttgcaggcacgtacggatatattgcaccagagcttgcttatacaatggaagtaaatgagaagtgtgatgtttatagctttggagtggtggcattggagatacttataggaagacatcctggagatcttctctcatctctatcatcggagtcgtcgtcatcatcaactgcattaccagcccatccaatgccagttgtggatgttttggaccaacgcatttcccctccgacacatcaagttgcaggggaagtgctctcgcttatgaagatagcatttgcatgcctgaattccgctcctctatctcgtccaacaatgaaacaagtatctcaacaatttgaaagtcatcagaggctgcatttgtcaaagccattatctatgataacactaggggaattgcttgctctcgatggtttgtgtttggctatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1270

Amino Acids

139.39

Weight (kDa)

6.34

Isoelectric Point (pI)

27.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1280
AccB1I GGYRCC 3 cut(s) 704, 1136, 1280
AccB7I CCANNNNNTGG 1 cut(s) 506
AccBSI CCGCTC 1 cut(s) 3677
AccI GTMKAC 2 cut(s) 334, 2940
AccIII TCCGGA 1 cut(s) 485
AciI CCGC 2 cut(s) 1319, 3675
AclWI GGATC 5 cut(s) 609, 897, 1041, 1329, 1822
AcsI RAATTY 8 cut(s) 353, 492, 2032, 2106, 2335, 2826, 3026, 3670
AcuI CTGAAG 3 cut(s) 138, 203, 2211
AdeI CACNNNGTG 1 cut(s) 1373
AfaI GTAC 4 cut(s) 1282, 1334, 1885, 3398
AfiI CCNNNNNNNGG 4 cut(s) 184, 506, 1608, 2692
AflIII ACRYGT 1 cut(s) 2218
AjiI CACGTC 1 cut(s) 2219
AjnI CCWGG 1 cut(s) 3502
AleI CACNNNNGTG 1 cut(s) 1851
AloI GAACNNNNNNTCC 2 cut(s) 1583, 1615
Alw26I GTCTC 1 cut(s) 1967
Alw44I GTGCAC 1 cut(s) 3272
AlwI GGATC 5 cut(s) 609, 897, 1041, 1329, 1822
AlwNI CAGNNNCTG 3 cut(s) 330, 2975, 3736
Aor13HI TCCGGA 1 cut(s) 485
AoxI GGCC 1 cut(s) 1711
ApaLI GTGCAC 1 cut(s) 3272
ApeKI GCWGC 2 cut(s) 2606, 3736
ApoI RAATTY 8 cut(s) 353, 492, 2032, 2106, 2335, 2826, 3026, 3670
ArsI GACNNNNNNTTYG 2 cut(s) 1789, 1821
AseI ATTAAT 1 cut(s) 1626
Asp718I GGTACC 1 cut(s) 1280
AspS9I GGNCC 7 cut(s) 1425, 1569, 1712, 1856, 2576, 2695, 3592
AsuC2I CCSGG 4 cut(s) 847, 991, 1423, 3278
AvaII GGWCC 6 cut(s) 1425, 1569, 1856, 2576, 2695, 3592
BaeGI GKGCMC 3 cut(s) 2030, 3049, 3276
BanI GGYRCC 3 cut(s) 704, 1136, 1280
BarI GAAGNNNNNNTAC 2 cut(s) 2421, 2453
BbsI GAAGAC 3 cut(s) 503, 2532, 3502
BbvCI CCTCAGC 1 cut(s) 395
BbvI GCAGC 2 cut(s) 2593, 3723
BccI CCATC 8 cut(s) 465, 2449, 2846, 2997, 3186, 3248, 3573, 3785
BciT130I CCWGG 1 cut(s) 3504
BciVI GTATCC 1 cut(s) 2566
BcnI CCSGG 4 cut(s) 847, 991, 1423, 3278
BcoDI GTCTC 1 cut(s) 1967
BfmI CTRYAG 2 cut(s) 1938, 3153
BfuI GTATCC 1 cut(s) 2566
BglI GCCNNNNNGGC 1 cut(s) 1134
BglII AGATCT 1 cut(s) 3508
BisI GCNGC 2 cut(s) 2607, 3737
BlsI GCNGC 2 cut(s) 2608, 3738
Bme1390I CCNGG 5 cut(s) 847, 991, 1423, 3278, 3504
Bme18I GGWCC 6 cut(s) 1425, 1569, 1856, 2576, 2695, 3592
BmgBI CACGTC 1 cut(s) 2219
BmgT120I GGNCC 7 cut(s) 1425, 1569, 1712, 1856, 2576, 2695, 3592
BmrFI CCNGG 5 cut(s) 847, 991, 1423, 3278, 3504
BmrI ACTGGG 2 cut(s) 1379, 3197
BmsI GCATC 3 cut(s) 2800, 3048, 3298
BmuI ACTGGG 2 cut(s) 1379, 3197
BpiI GAAGAC 3 cut(s) 503, 2532, 3502
BplI GAGNNNNNCTC 2 cut(s) 3498, 3530
BpmI CTGGAG 1 cut(s) 3525
Bpu10I CCTNAGC 1 cut(s) 395
BpuEI CTTGAG 5 cut(s) 1207, 1495, 1639, 1707, 2598
BpuMI CCSGG 4 cut(s) 847, 991, 1423, 3278
BsaAI YACGTR 1 cut(s) 3396
BsaJI CCNNGG 1 cut(s) 1602
BsaWI WCCGGW 2 cut(s) 485, 640
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 3524, 3554
Bsc4I CCNNNNNNNGG 4 cut(s) 184, 506, 1608, 2692
Bse3DI GCAATG 4 cut(s) 295, 318, 2621, 3342
BseAI TCCGGA 1 cut(s) 485
BseBI CCWGG 1 cut(s) 3504
BseDI CCNNGG 1 cut(s) 1602
BseGI GGATG 6 cut(s) 420, 3197, 3313, 3499, 3565, 3589
BseLI CCNNNNNNNGG 4 cut(s) 184, 506, 1608, 2692
BseMI GCAATG 4 cut(s) 295, 318, 2621, 3342
BseMII CTCAG 9 cut(s) 409, 538, 640, 784, 1360, 1648, 1909, 2283, 3045
BseRI GAGGAG 2 cut(s) 443, 3669
BseSI GKGCMC 3 cut(s) 2030, 3049, 3276
BseXI GCAGC 2 cut(s) 2593, 3723
BshFI GGCC 1 cut(s) 1713
BshNI GGYRCC 3 cut(s) 704, 1136, 1280
BsiSI CCGG 7 cut(s) 486, 641, 846, 990, 1422, 1710, 3277
BsiWI CGTACG 1 cut(s) 3396
BslFI GGGAC 7 cut(s) 862, 1006, 1438, 1582, 2158, 2207, 3293
BslI CCNNNNNNNGG 4 cut(s) 184, 506, 1608, 2692
BsmAI GTCTC 1 cut(s) 1967
BsmFI GGGAC 7 cut(s) 862, 1006, 1438, 1582, 2158, 2207, 3293
BsnI GGCC 1 cut(s) 1713
Bsp13I TCCGGA 1 cut(s) 485
Bsp1407I TGTACA 1 cut(s) 1332
BspACI CCGC 2 cut(s) 1319, 3675
BspANI GGCC 1 cut(s) 1713
BspCNI CTCAG 9 cut(s) 408, 537, 639, 783, 1359, 1647, 1908, 2282, 3046
BspEI TCCGGA 1 cut(s) 485
BspHI TCATGA 1 cut(s) 3213
BspPI GGATC 5 cut(s) 609, 897, 1041, 1329, 1822
BspQI GCTCTTC 1 cut(s) 135
BspT107I GGYRCC 3 cut(s) 704, 1136, 1280
BsrBI CCGCTC 1 cut(s) 3677
BsrDI GCAATG 4 cut(s) 295, 318, 2621, 3342
BsrGI TGTACA 1 cut(s) 1332
BssECI CCNNGG 1 cut(s) 1602
BssNAI GTATAC 1 cut(s) 335
BssT1I CCWWGG 1 cut(s) 1602
Bst1107I GTATAC 1 cut(s) 335
Bst2UI CCWGG 1 cut(s) 3504
Bst4CI ACNGT 5 cut(s) 44, 2465, 2847, 2971, 3157
Bst6I CTCTTC 2 cut(s) 135, 1555
BstAUI TGTACA 1 cut(s) 1332
BstBAI YACGTR 1 cut(s) 3396
BstC8I GCNNGC 5 cut(s) 1757, 3391, 3420, 3664, 3783
BstENI CCTNNNNNAGG 1 cut(s) 1606
BstF5I GGATG 6 cut(s) 420, 3197, 3313, 3499, 3565, 3589
BstMAI GTCTC 1 cut(s) 1967
BstMWI GCNNNNNNNGC 4 cut(s) 1134, 2646, 2750, 3560
BstNI CCWGG 1 cut(s) 3504
BstNSI RCATGY 6 cut(s) 2461, 2533, 2801, 3247, 3327, 3666
BstSCI CCNGG 5 cut(s) 845, 989, 1421, 3276, 3502
BstSFI CTRYAG 2 cut(s) 1938, 3153
BstSLI GKGCMC 3 cut(s) 2030, 3049, 3276
BstV1I GCAGC 2 cut(s) 2593, 3723
BstV2I GAAGAC 3 cut(s) 503, 2532, 3502
BstX2I RGATCY 5 cut(s) 601, 889, 1033, 1321, 3508
BstXI CCANNNNNNTGG 1 cut(s) 270
BstYI RGATCY 5 cut(s) 601, 889, 1033, 1321, 3508
BstZ17I GTATAC 1 cut(s) 335
BsuI GTATCC 1 cut(s) 2566
BsuRI GGCC 1 cut(s) 1713
BtrI CACGTC 1 cut(s) 2219
BtsCI GGATG 6 cut(s) 420, 3197, 3313, 3499, 3565, 3589
BtsI GCAGTG 1 cut(s) 2579
BtsIMutI CAGTG 9 cut(s) 634, 778, 1354, 1367, 1642, 2579, 3000, 3100, 3162
Cac8I GCNNGC 5 cut(s) 1757, 3391, 3420, 3664, 3783
CaiI CAGNNNCTG 3 cut(s) 330, 2975, 3736
CciI TCATGA 1 cut(s) 3213
Cfr13I GGNCC 7 cut(s) 1425, 1569, 1712, 1856, 2576, 2695, 3592
CseI GACGC 1 cut(s) 3050
Csp6I GTAC 4 cut(s) 1281, 1333, 1884, 3397
CviQI GTAC 4 cut(s) 1281, 1333, 1884, 3397
DraIII CACNNNGTG 1 cut(s) 1373
Eam1104I CTCTTC 2 cut(s) 135, 1555
EarI CTCTTC 2 cut(s) 135, 1555
EciI GGCGGA 1 cut(s) 1334
Eco130I CCWWGG 1 cut(s) 1602
Eco32I GATATC 1 cut(s) 418
Eco47I GGWCC 6 cut(s) 1425, 1569, 1856, 2576, 2695, 3592
Eco57I CTGAAG 3 cut(s) 138, 203, 2211
EcoNI CCTNNNNNAGG 1 cut(s) 1606
EcoRI GAATTC 3 cut(s) 492, 3026, 3670
EcoRII CCWGG 1 cut(s) 3502
EcoRV GATATC 1 cut(s) 418
EcoT14I CCWWGG 1 cut(s) 1602
EcoT22I ATGCAT 1 cut(s) 2535
ErhI CCWWGG 1 cut(s) 1602
FaqI GGGAC 7 cut(s) 862, 1006, 1438, 1582, 2158, 2207, 3293
FblI GTMKAC 2 cut(s) 334, 2940
Fnu4HI GCNGC 2 cut(s) 2607, 3737
FokI GGATG 6 cut(s) 407, 3204, 3320, 3486, 3552, 3596
Fsp4HI GCNGC 2 cut(s) 2607, 3737
GluI GCNGC 2 cut(s) 2607, 3737
GsuI CTGGAG 1 cut(s) 3525
HaeIII GGCC 1 cut(s) 1713
HapII CCGG 7 cut(s) 486, 641, 846, 990, 1422, 1710, 3277
HgaI GACGC 1 cut(s) 3050
HindIII AAGCTT 2 cut(s) 1870, 2299
HpaII CCGG 7 cut(s) 486, 641, 846, 990, 1422, 1710, 3277
Hpy166II GTNNAC 8 cut(s) 40, 61, 335, 1954, 2579, 2941, 3098, 3274
Hpy8I GTNNAC 8 cut(s) 40, 61, 335, 1954, 2579, 2941, 3098, 3274
Hpy99I CGWCG 2 cut(s) 1222, 3541
HpyAV CCTTC 6 cut(s) 178, 209, 2235, 2423, 2567, 2686
HpyCH4III ACNGT 5 cut(s) 44, 2465, 2847, 2971, 3157
HpyCH4IV ACGT 5 cut(s) 2218, 2543, 2553, 2861, 3395
HpyF10VI GCNNNNNNNGC 4 cut(s) 1134, 2646, 2750, 3560
HpySE526I ACGT 5 cut(s) 2218, 2543, 2553, 2861, 3395
Kpn2I TCCGGA 1 cut(s) 485
KpnI GGTACC 1 cut(s) 1284
LguI GCTCTTC 1 cut(s) 135
LmnI GCTCC 3 cut(s) 2158, 2735, 3682
Lsp1109I GCAGC 2 cut(s) 2593, 3723
LweI GCATC 3 cut(s) 2800, 3048, 3298
MaeII ACGT 5 cut(s) 2218, 2543, 2553, 2861, 3395
MbiI CCGCTC 1 cut(s) 3677
MfeI CAATTG 3 cut(s) 268, 1919, 3267
MflI RGATCY 5 cut(s) 601, 889, 1033, 1321, 3508
MlyI GAGTC 4 cut(s) 762, 1908, 3359, 3542
Mph1103I ATGCAT 1 cut(s) 2535
MroI TCCGGA 1 cut(s) 485
MseI TTAA 9 cut(s) 1626, 1685, 1763, 2036, 2235, 2324, 2418, 2478, 2898
MslI CAYNNNNRTG 6 cut(s) 1203, 1491, 1851, 2796, 3252, 3661
MspA1I CMGCKG 2 cut(s) 181, 2084
MspI CCGG 7 cut(s) 486, 641, 846, 990, 1422, 1710, 3277
MspR9I CCNGG 5 cut(s) 847, 991, 1423, 3278, 3504
MunI CAATTG 3 cut(s) 268, 1919, 3267
MvaI CCWGG 1 cut(s) 3504
MwoI GCNNNNNNNGC 4 cut(s) 1134, 2646, 2750, 3560
NciI CCSGG 4 cut(s) 847, 991, 1423, 3278
NmuCI GTSAC 6 cut(s) 304, 1661, 1694, 1784, 3062, 3261
NsiI ATGCAT 1 cut(s) 2535
NspI RCATGY 6 cut(s) 2461, 2533, 2801, 3247, 3327, 3666
OliI CACNNNNGTG 1 cut(s) 1851
PaeI GCATGC 1 cut(s) 3666
PagI TCATGA 1 cut(s) 3213
PciSI GCTCTTC 1 cut(s) 135
PcsI WCGNNNNNNNCGW 1 cut(s) 3536
PfeI GAWTC 6 cut(s) 1118, 1177, 1303, 1465, 2288, 3013
Pfl23II CGTACG 1 cut(s) 3396
PflMI CCANNNNNTGG 1 cut(s) 506
PfoI TCCNGGA 3 cut(s) 845, 989, 3502
PkrI GCNGC 2 cut(s) 2608, 3738
PleI GAGTC 4 cut(s) 762, 1907, 3359, 3541
PpsI GAGTC 4 cut(s) 762, 1907, 3359, 3541
Ppu21I YACGTR 1 cut(s) 3396
PshBI ATTAAT 1 cut(s) 1626
Psp6I CCWGG 1 cut(s) 3502
PspGI CCWGG 1 cut(s) 3502
PspLI CGTACG 1 cut(s) 3396
PspPI GGNCC 7 cut(s) 1425, 1569, 1712, 1856, 2576, 2695, 3592
PstNI CAGNNNCTG 3 cut(s) 330, 2975, 3736
PsuI RGATCY 5 cut(s) 601, 889, 1033, 1321, 3508
PvuII CAGCTG 2 cut(s) 181, 2084
RsaI GTAC 4 cut(s) 1282, 1334, 1885, 3398
RsaNI GTAC 4 cut(s) 1281, 1333, 1884, 3397
RseI CAYNNNNRTG 6 cut(s) 1203, 1491, 1851, 2796, 3252, 3661
SapI GCTCTTC 1 cut(s) 135
SaqAI TTAA 9 cut(s) 1626, 1685, 1763, 2036, 2235, 2324, 2418, 2478, 2898
SatI GCNGC 2 cut(s) 2607, 3737
Sau96I GGNCC 7 cut(s) 1425, 1569, 1712, 1856, 2576, 2695, 3592
SchI GAGTC 4 cut(s) 762, 1908, 3359, 3542
ScrFI CCNGG 5 cut(s) 847, 991, 1423, 3278, 3504
SfaNI GCATC 3 cut(s) 2800, 3048, 3298
SfcI CTRYAG 2 cut(s) 1938, 3153
SinI GGWCC 6 cut(s) 1425, 1569, 1856, 2576, 2695, 3592
SmiMI CAYNNNNRTG 6 cut(s) 1203, 1491, 1851, 2796, 3252, 3661
SmlI CTYRAG 5 cut(s) 1186, 1474, 1618, 1722, 2613
SmoI CTYRAG 5 cut(s) 1186, 1474, 1618, 1722, 2613
SphI GCATGC 1 cut(s) 3666
SsiI CCGC 2 cut(s) 1319, 3675
SspI AATATT 2 cut(s) 1683, 3073
StyD4I CCNGG 5 cut(s) 845, 989, 1421, 3276, 3502
StyI CCWWGG 1 cut(s) 1602
TaaI ACNGT 5 cut(s) 44, 2465, 2847, 2971, 3157
TaiI ACGT 5 cut(s) 2221, 2546, 2556, 2864, 3398
TatI WGTACW 2 cut(s) 1332, 1883
TfiI GAWTC 6 cut(s) 1118, 1177, 1303, 1465, 2288, 3013
Tru1I TTAA 9 cut(s) 1626, 1685, 1763, 2036, 2235, 2324, 2418, 2478, 2898
Tru9I TTAA 9 cut(s) 1626, 1685, 1763, 2036, 2235, 2324, 2418, 2478, 2898
TscAI CASTG 9 cut(s) 634, 778, 1354, 1374, 1642, 2586, 3007, 3107, 3162
TseFI GTSAC 6 cut(s) 304, 1661, 1694, 1784, 3062, 3261
TseI GCWGC 2 cut(s) 2606, 3736
Tsp45I GTSAC 6 cut(s) 304, 1661, 1694, 1784, 3062, 3261
TspGWI ACGGA 2 cut(s) 1892, 3414
TspRI CASTG 9 cut(s) 634, 778, 1354, 1374, 1642, 2586, 3007, 3107, 3162
Van91I CCANNNNNTGG 1 cut(s) 506
VneI GTGCAC 1 cut(s) 3272
VpaK11BI GGWCC 6 cut(s) 1425, 1569, 1856, 2576, 2695, 3592
VspI ATTAAT 1 cut(s) 1626
XagI CCTNNNNNAGG 1 cut(s) 1606
XapI RAATTY 8 cut(s) 353, 492, 2032, 2106, 2335, 2826, 3026, 3670
XbaI TCTAGA 4 cut(s) 604, 892, 1036, 2251
XceI RCATGY 6 cut(s) 2461, 2533, 2801, 3247, 3327, 3666
XmiI GTMKAC 2 cut(s) 334, 2940
Zsp2I ATGCAT 1 cut(s) 2535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.