RchiOBHm_Chr3g0491341

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
38052684 .. 38056942
4259 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45434

Sequence Viewer

Length: 3684 bp
ATGCAGCTTTATTGGACAGACCACAACATCATGAAAGCAGTTCAGGAGACTCCACTGCGTCTCCTCCTCCTCGATATTTTCTTGCTCTTTTTGCTTCCATTGGAGGCCACATCATCACAAAGAATACATGCTGAAGCTCTCATACAATGGAAGAACAGCTTTACTTCTTCACCACCTTCTCTGAATTCATGGTCGCTCACAAACCTAAACAACCTGTGCAACTGGCCTGCCATTGTCTGCAACCACAATACACAAACAGTGTCTGAAATTCACCTTGCAAACTTCAACATCACTGCAGCACTAACACAGTTCAACTTCAACAAGTTTCTCGATCTCACCCATCTCAACCTCAATGGCAACAATTTCTCAGGGCCTATACCATCTGCCATTGGCAACCTCACCAAGCTCACAACCTTGGATTTGGGAAACAATATCTTGGAACGAGAAGTGCCTGCAGAAATGGGCAAGTTAACGGAGCTTCAGTTTCTAAGTCTCTACAACAACTCTCTCAATGGTACCATTCCCTATCAGCTGGACAATCTCAAAAAGGTACAATATTTGCTTCTTGGAAGGAACAAGTTAGACACTCCTGACTGGTCTAAATTTTCAGGCTTTCCTTTCTTAACATACCTTGATCTTTGTCTGAACAATTTGGATTTAGAATTCCCAGAATTTATATCTGAATGTAAGAGCTTGACCTTCCTGGATTTGTCTGAAAATCTTTTGACTGGCCAAATACCGAAATTGGTAGTTACCAACCTGGTCAAGCTTGAATCTCTCAATCTCACCGATAACCGATTCCAAGGGCCAATGCCATATAACTTTCCCAACCTCAAACACCTTTATTTGGAATCGAACGACTTTAGTGGTCCAATTCCTGAATATATTGGTTTGATATCTGGTCTTCAATTTATTTACCTTGATGACAATTCCTTTGAAGGCAAAATCCCATCCTCTGTAGGCCAACTCAGGGAGCTTCAGCACCTCGATCTTCGAGAGAATTCCTTGAACTCTTCAATCCCTTTTGAGCTTGGTAATTGTACCAACCTCACTTATTTGGCCTTGGCTGTAAATAAACTCACTGGGGAACTGCCTCTGTCCTTGTCCAATCTCAACAGCTTGATGGAGTTGGGGTTATCTGATAATCTATTTACCGGGCCAATCTTGCCTTCTTTAATCTCCAATTGGACTGAATTGATATCTTTGCAACTCCAAAACAATAGCTTTAGTGGGAATATTCCACCAGAAATTGGCCTGTTGACAAAACTCAATTTCCTCTATCTGTACAACAACAATTTCTCTGGATCAATTCCCTCAGAGATAGGAAACTTGAAAGTGTTGAAAGATTTAAGCATTCACGACAACAATCTCAGCGGAACAATTCCCTCAGAGATAGGAAACTTGAAAGTGTTGAAAGATTTAAGCATTCACGACAACAATCTCAGCGGAACAATCCCTCCAGAGATTGGAAACATGAGTTCCATTGTTTACTTTGATGTCTACGGAAACCTACTTGAAGGGGAGTTGCCAAAAACTATTTCTCACCTCAGAAAACTGGAGTGGTTTTCCGTTTTCACTAATAGGTTTTCGGGGACCATTCCCAGTGATTTCGGGAAGTATAGTCCTAACTTGAGATTTGTTAGTTTCGCATGGAACAACTTCTCTGGAGAATTGCCTCCCGAGTTGTGTAGTGGATTTGCCTTGCAAGAATTGAAAGTGCACTCGAACAACTTCACAGGCTCATTGCCTGAGTGCTTGAGAAATTGTTCTGCATTAAAATATGTCCGGCTTGAAGTAAACCACTTCACCGGAAACATTAACAATGCATTTGGTGTTCATCCCCATCTTGAAGTAATTCATCTTAGTCGCAACAAGTTCGTTGGTCAACTCTCACCACAATGGGGAGAATGCAAAAACATCACGGATATGCAAATGGACGGAAATAGAATTTCTGGGCAAATCCCACCTGAGCTTGGTCAGCTGACACAATTGCAGTATCTAAACCTAGCCTCTAATGAATTCAGTGGGGAGTTTCCAGTTTCCATTGGGAATTCAAGCTTGTTGTTCACTCTTAATCTCAGCAGGAACAACTTGATGGGAACTATTCCTCATGTTCTAGGCAAATTGACTAAGCTCGAGTGTCTTGATTTGTCTGATAATAATTTTACAGGGGTATTACCAGCCGACCCTGGGACGTTTGAGCGTTTAACAAGCTTGAACATAAGCCACAACAATTTATCAGGTGAGATACCAGAAGAGATTGGTAATCTACCCCTACGGTACTTCTTGGACCTCAGCAGCAATTCATTCTCGGGATCAGTACCATCAAACCTTGCCAAGCTCATAATGCTGGAGATTCTTAATGTCTCACATAACCAACTCTCAGGGAACATCCCAACAACATATTCTAGAATGGTTAGTCTTCTCGGCATTGATTTTTCTTACAACAACTTGACAGGTCCAATCCCAACTGGTAGCATTTTCCAAAAGAAGCTTCCGAATAATGCTTTCATTGGAAATAGTGGTTTGTGTGGTGAAACAGAGGGACTAACTCCATGCATTTCGGGTCCCAAAAAATCCAACAAGAGAATTCTTGTTGGCGTCCTTGTTCCCATTTGTGGTTTATTGCTAATGGTGACCATATCTACTTTAATCCTTAAGTTCTGCAAGAAATCAAAGCTTGGAGAAATCGATCATCCTAAGGTGTCTAAATGTTTTGATTCAATTATTTGGGGAAGACATGGTAAACTTACATTTTCTGAAATCATCACTGCCACCGAGAACTTTGATGAAAAGTATCTCATTGGAACAGGAGGTTTTGGAAGTGTCTACAAGGCTGCGTTGGACAGAGGCAAAGTCGTTGCGGTTAAGAAATTGAATATGTCAGCAGATTCTAGTGACGACATTCCAGAATTGAATCGCAAGAGTTTTGAGAATGAGATAAGAACTTTGACAGAAGTGATGCACAGAAATGTAATAAAACTTTATGGGTTCTGCTCCTGGAAGGGGTGCTTGTACTTGGTGTATGAATATGCACAGAGAGGCAGTTTGAAAATGGTATTGTATGGAGTGGAGGGCGAAGCAGAAGTACTTGGCTGGGGCACAAGGTTAAAAATTATGCAAGGAATAGCTCATGCTATTTCTCACTTGCATAATGACTGCTCTCACCCAATCGTTCACCGCGACATAACTTTGAGCAACATATTACTAGATCAGGATTTCGTGCCACGCCTATCAGACTTTGGAACAGCAAGACTATTGAGCTCAGATTCGTCAAACTGGACTGCTGTAGCAGGGTCTTATGGCTACATGGCTCCAGAGCTCGCTTTCACAATGCAAGTGACAGATAAGTGTGATGTATACAGCTTTGGAGTGGTAGCATTAGAAATCATGATGGGAAGGCATCCAGGGGAGCTACTGACTTCTCTATCGGAAAATGGAGATATGCTTTTGAAGGATTTGCTAGACCAACGACTTCGGTCACCTTCAAGTCAATTAGCAGGGCGAGTGGTTTCCATGGTAACATTGGCCTTGGCCTGCATCAGCACGAATCCTGATTCACGACCCACCATGCATTATGTGGCAAAAGAACTATCATCCACCAAGACCTGGACTTGCCTCTATGAGCCGTTGGGCACGATAACCATCAATAAGTTGGCAAGTTGTCATAAGACTCATAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1227

Amino Acids

136.2

Weight (kDa)

5.82

Isoelectric Point (pI)

32.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 105 - 189 5e-08 Leucine-rich repeat region
LRR_14 PF23598 258 - 379 5.1e-08 Leucine-rich repeat region
LRR_14 PF23598 389 - 477 3.4e-08 Leucine-rich repeat region
LRR_14 PF23598 464 - 635 6.1e-06 Leucine-rich repeat region
LRR_14 PF23598 657 - 739 4.8e-08 Leucine-rich repeat region
Pkinase PF00069 931 - 1195 2.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 934 - 1198 8.7e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 515
AccB1I GGYRCC 1 cut(s) 515
AccB7I CCANNNNNTGG 3 cut(s) 1250, 1466, 3609
AccI GTMKAC 3 cut(s) 1500, 2829, 3360
AccII CGCG 1 cut(s) 3183
AciI CCGC 4 cut(s) 1374, 1446, 2864, 3181
AclWI GGATC 2 cut(s) 1312, 2323
AcoI YGGCCR 1 cut(s) 730
AcuI CTGAAG 3 cut(s) 153, 464, 962
AcyI GRCGYC 1 cut(s) 2601
AfaI GTAC 8 cut(s) 517, 552, 1042, 1286, 2282, 2322, 3017, 3090
AflII CTTAAG 1 cut(s) 2657
AjnI CCWGG 6 cut(s) 702, 759, 2188, 2999, 3406, 3608
AjuI GAANNNNNNNTTGG 8 cut(s) 1153, 1185, 1522, 1554, 2389, 2421, 2478, 2510
AloI GAACNNNNNNTCC 2 cut(s) 1441, 1473
Alw21I GWGCWC 3 cut(s) 1722, 3266, 3324
Alw26I GTCTC 4 cut(s) 41, 65, 497, 2371
Alw44I GTGCAC 1 cut(s) 1718
AlwI GGATC 2 cut(s) 1312, 2323
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 3 cut(s) 1679, 2135, 2311
ApaLI GTGCAC 1 cut(s) 1718
ApeKI GCWGC 4 cut(s) 4, 296, 2298, 2837
ArsI GACNNNNNNTTYG 2 cut(s) 917, 949
Asp700I GAANNNNTTC 4 cut(s) 1658, 1730, 1765, 1854
Asp718I GGTACC 1 cut(s) 515
AspS9I GGNCC 8 cut(s) 371, 806, 869, 1157, 1593, 2290, 2459, 2567
AsuC2I CCSGG 1 cut(s) 1156
AvaI CYCGRG 3 cut(s) 1679, 2135, 2311
AvaII GGWCC 5 cut(s) 869, 1593, 2290, 2459, 2567
AxyI CCTNAGG 1 cut(s) 2700
BaeGI GKGCMC 3 cut(s) 1722, 3104, 3638
BalI TGGCCA 1 cut(s) 732
BanI GGYRCC 1 cut(s) 515
BanII GRGCYC 2 cut(s) 3266, 3324
BarI GAAGNNNNNNTAC 4 cut(s) 126, 158, 3072, 3104
BbsI GAAGAC 3 cut(s) 896, 2414, 2743
Bbv12I GWGCWC 3 cut(s) 1722, 3266, 3324
BbvCI CCTCAGC 1 cut(s) 2294
BbvI GCAGC 4 cut(s) 16, 308, 2310, 2824
BccI CCATC 9 cut(s) 348, 388, 958, 1117, 1851, 2089, 2332, 3388, 3653
BceAI ACGGC 1 cut(s) 3613
BcgI CGANNNNNNTGC 2 cut(s) 1858, 1892
BciT130I CCWGG 6 cut(s) 704, 761, 2190, 3001, 3408, 3610
BcnI CCSGG 1 cut(s) 1156
BcoDI GTCTC 4 cut(s) 41, 65, 497, 2371
BfaI CTAG 7 cut(s) 2006, 2117, 2409, 2895, 3209, 3464, 3682
BfmI CTRYAG 4 cut(s) 294, 453, 957, 3288
BfrI CTTAAG 1 cut(s) 2657
BisI GCNGC 4 cut(s) 5, 297, 2299, 2838
BlsI GCNGC 4 cut(s) 6, 298, 2300, 2839
BmcAI AGTACT 1 cut(s) 3090
Bme1390I CCNGG 7 cut(s) 704, 761, 1156, 2190, 3001, 3408, 3610
Bme18I GGWCC 5 cut(s) 869, 1593, 2290, 2459, 2567
BmeT110I CYCGRG 3 cut(s) 1679, 2135, 2311
BmgT120I GGNCC 8 cut(s) 371, 806, 869, 1157, 1593, 2290, 2459, 2567
BmiI GGNNCC 5 cut(s) 517, 1594, 2568, 2569, 3315
BmrFI CCNGG 7 cut(s) 704, 761, 1156, 2190, 3001, 3408, 3610
BmrI ACTGGG 2 cut(s) 1092, 1596
BmsI GCATC 3 cut(s) 2952, 3412, 3549
BmuI ACTGGG 2 cut(s) 1092, 1596
BoxI GACNNNNGTC 1 cut(s) 3478
BpiI GAAGAC 3 cut(s) 896, 2414, 2743
BpmI CTGGAG 5 cut(s) 1443, 1577, 1686, 2372, 3300
Bpu10I CCTNAGC 2 cut(s) 1968, 2294
BpuEI CTTGAG 2 cut(s) 1651, 1777
BpuMI CCSGG 1 cut(s) 1156
Bsa29I ATCGAT 1 cut(s) 2691
BsaBI GATNNNNATC 1 cut(s) 3644
BsaHI GRCGYC 1 cut(s) 2601
BsaJI CCNNGG 8 cut(s) 414, 802, 1062, 2188, 2189, 3407, 3516, 3531
BsaWI WCCGGW 1 cut(s) 1808
BsaXI ACNNNNNCTCC 8 cut(s) 45, 75, 467, 497, 1118, 1148, 1441, 1471
Bse1I ACTGG 9 cut(s) 227, 599, 733, 1087, 1560, 1602, 2036, 2476, 3284
Bse21I CCTNAGG 1 cut(s) 2700
Bse3DI GCAATG 1 cut(s) 1742
Bse8I GATNNNNATC 1 cut(s) 3644
BseBI CCWGG 6 cut(s) 704, 761, 2190, 3001, 3408, 3610
BseCI ATCGAT 1 cut(s) 2691
BseDI CCNNGG 8 cut(s) 414, 802, 1062, 2188, 2189, 3407, 3516, 3531
BseGI GGATG 6 cut(s) 950, 1837, 2391, 2695, 3403, 3596
BseJI GATNNNNATC 1 cut(s) 3644
BseMI GCAATG 1 cut(s) 1742
BseNI ACTGG 9 cut(s) 227, 599, 733, 1087, 1560, 1602, 2036, 2476, 3284
BseRI GAGGAG 3 cut(s) 53, 56, 59
BseSI GKGCMC 3 cut(s) 1722, 3104, 3638
BseXI GCAGC 4 cut(s) 16, 308, 2310, 2824
BseYI CCCAGC 1 cut(s) 3096
Bsh1236I CGCG 1 cut(s) 3183
BshNI GGYRCC 1 cut(s) 515
BshVI ATCGAT 1 cut(s) 2691
BsiHKAI GWGCWC 3 cut(s) 1722, 3266, 3324
BsiHKCI CYCGRG 3 cut(s) 1679, 2135, 2311
BsiSI CCGG 3 cut(s) 1155, 1786, 1809
BslFI GGGAC 4 cut(s) 1606, 2206, 2553, 2559
BsmAI GTCTC 4 cut(s) 41, 65, 497, 2371
BsmBI CGTCTC 1 cut(s) 65
BsmFI GGGAC 4 cut(s) 1606, 2206, 2553, 2559
BsmI GAATGC 3 cut(s) 1353, 1425, 1913
BsoBI CYCGRG 3 cut(s) 1679, 2135, 2311
Bsp1286I GDGCHC 5 cut(s) 1722, 3104, 3266, 3324, 3638
Bsp1407I TGTACA 1 cut(s) 1284
Bsp143I GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
Bsp19I CCATGG 1 cut(s) 3516
BspACI CCGC 4 cut(s) 1374, 1446, 2864, 3181
BspDI ATCGAT 1 cut(s) 2691
BspFNI CGCG 1 cut(s) 3183
BspHI TCATGA 2 cut(s) 30, 3390
BspLI GGNNCC 5 cut(s) 517, 1594, 2568, 2569, 3315
BspMAI CTGCAG 2 cut(s) 298, 457
BspPI GGATC 2 cut(s) 1312, 2323
BspT107I GGYRCC 1 cut(s) 515
BspTI CTTAAG 1 cut(s) 2657
BsrDI GCAATG 1 cut(s) 1742
BsrGI TGTACA 1 cut(s) 1284
BsrI ACTGG 9 cut(s) 227, 599, 733, 1087, 1560, 1602, 2036, 2476, 3284
BssECI CCNNGG 8 cut(s) 414, 802, 1062, 2188, 2189, 3407, 3516, 3531
BssMI GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
BssNAI GTATAC 1 cut(s) 3361
BssNI GRCGYC 1 cut(s) 2601
BssT1I CCWWGG 5 cut(s) 414, 802, 1062, 3516, 3531
Bst1107I GTATAC 1 cut(s) 3361
Bst2UI CCWGG 6 cut(s) 704, 761, 2190, 3001, 3408, 3610
Bst4CI ACNGT 3 cut(s) 259, 309, 2280
Bst6I CTCTTC 2 cut(s) 1018, 2250
BstACI GRCGYC 1 cut(s) 2601
BstAFI CTTAAG 1 cut(s) 2657
BstAUI TGTACA 1 cut(s) 1284
BstC8I GCNNGC 4 cut(s) 228, 453, 3324, 3538
BstDSI CCRYGG 1 cut(s) 3516
BstEII GGTNACC 2 cut(s) 2635, 3480
BstF5I GGATG 6 cut(s) 950, 1837, 2391, 2695, 3403, 3596
BstFNI CGCG 1 cut(s) 3183
BstKTI GATC 7 cut(s) 334, 637, 991, 1307, 2318, 2695, 3214
BstMAI GTCTC 4 cut(s) 41, 65, 497, 2371
BstMBI GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
BstMWI GCNNNNNNNGC 4 cut(s) 91, 1165, 1978, 2347
BstNI CCWGG 6 cut(s) 704, 761, 2190, 3001, 3408, 3610
BstNSI RCATGY 1 cut(s) 131
BstPAI GACNNNNGTC 1 cut(s) 3478
BstPI GGTNACC 2 cut(s) 2635, 3480
BstSCI CCNGG 7 cut(s) 702, 759, 1154, 2188, 2999, 3406, 3608
BstSFI CTRYAG 4 cut(s) 294, 453, 957, 3288
BstSLI GKGCMC 3 cut(s) 1722, 3104, 3638
BstUI CGCG 1 cut(s) 3183
BstV1I GCAGC 4 cut(s) 16, 308, 2310, 2824
BstV2I GAAGAC 3 cut(s) 896, 2414, 2743
BstZ17I GTATAC 1 cut(s) 3361
Bsu15I ATCGAT 1 cut(s) 2691
Bsu36I CCTNAGG 1 cut(s) 2700
BsuTUI ATCGAT 1 cut(s) 2691
BtgI CCRYGG 1 cut(s) 3516
BtsCI GGATG 6 cut(s) 950, 1837, 2391, 2695, 3403, 3596
BtsI GCAGTG 3 cut(s) 53, 291, 2769
BtsIMutI CAGTG 7 cut(s) 53, 264, 291, 1080, 1609, 2029, 2769
Cac8I GCNNGC 4 cut(s) 228, 453, 3324, 3538
CaiI CAGNNNCTG 1 cut(s) 263
CciI TCATGA 2 cut(s) 30, 3390
Cfr13I GGNCC 8 cut(s) 371, 806, 869, 1157, 1593, 2290, 2459, 2567
ClaI ATCGAT 1 cut(s) 2691
CseI GACGC 2 cut(s) 47, 2590
CsiI ACCWGGT 1 cut(s) 759
Csp6I GTAC 8 cut(s) 516, 551, 1041, 1285, 2281, 2321, 3016, 3089
CviQI GTAC 8 cut(s) 516, 551, 1041, 1285, 2281, 2321, 3016, 3089
DpnI GATC 7 cut(s) 333, 636, 990, 1306, 2317, 2694, 3213
DpnII GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
EaeI YGGCCR 1 cut(s) 730
Eam1104I CTCTTC 2 cut(s) 1018, 2250
EarI CTCTTC 2 cut(s) 1018, 2250
Ecl136II GAGCTC 2 cut(s) 3264, 3322
Eco130I CCWWGG 5 cut(s) 414, 802, 1062, 3516, 3531
Eco24I GRGCYC 2 cut(s) 3266, 3324
Eco32I GATATC 2 cut(s) 897, 1200
Eco47I GGWCC 5 cut(s) 869, 1593, 2290, 2459, 2567
Eco53kI GAGCTC 2 cut(s) 3264, 3322
Eco57I CTGAAG 3 cut(s) 153, 464, 962
Eco81I CCTNAGG 1 cut(s) 2700
Eco88I CYCGRG 3 cut(s) 1679, 2135, 2311
Eco91I GGTNACC 2 cut(s) 2635, 3480
EcoICRI GAGCTC 2 cut(s) 3264, 3322
EcoO109I RGGNCCY 2 cut(s) 371, 2567
EcoO65I GGTNACC 2 cut(s) 2635, 3480
EcoRI GAATTC 6 cut(s) 184, 662, 1000, 2018, 2050, 2589
EcoRII CCWGG 6 cut(s) 702, 759, 2188, 2999, 3406, 3608
EcoRV GATATC 2 cut(s) 897, 1200
EcoT14I CCWWGG 5 cut(s) 414, 802, 1062, 3516, 3531
EcoT22I ATGCAT 3 cut(s) 1828, 2561, 3576
EcoT38I GRGCYC 2 cut(s) 3266, 3324
ErhI CCWWGG 5 cut(s) 414, 802, 1062, 3516, 3531
Esp3I CGTCTC 1 cut(s) 65
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 2996, 3028
FaqI GGGAC 4 cut(s) 1606, 2206, 2553, 2559
FblI GTMKAC 3 cut(s) 1500, 2829, 3360
Fnu4HI GCNGC 4 cut(s) 5, 297, 2299, 2838
FokI GGATG 6 cut(s) 937, 1824, 2378, 2682, 3390, 3583
FriOI GRGCYC 2 cut(s) 3266, 3324
Fsp4HI GCNGC 4 cut(s) 5, 297, 2299, 2838
FspBI CTAG 7 cut(s) 2006, 2117, 2409, 2895, 3209, 3464, 3682
GluI GCNGC 4 cut(s) 5, 297, 2299, 2838
GsaI CCCAGC 1 cut(s) 3100
GsuI CTGGAG 5 cut(s) 1443, 1577, 1686, 2372, 3300
HapII CCGG 3 cut(s) 1155, 1786, 1809
HgaI GACGC 2 cut(s) 47, 2590
Hin1I GRCGYC 1 cut(s) 2601
HincII GTYRAC 3 cut(s) 471, 1260, 1886
HindII GTYRAC 3 cut(s) 471, 1260, 1886
HindIII AAGCTT 5 cut(s) 767, 2056, 2212, 2492, 2678
HpaI GTTAAC 1 cut(s) 471
HpaII CCGG 3 cut(s) 1155, 1786, 1809
HpyCH4III ACNGT 3 cut(s) 259, 309, 2280
HpyCH4IV ACGT 1 cut(s) 2195
HpyF10VI GCNNNNNNNGC 4 cut(s) 91, 1165, 1978, 2347
HpySE526I ACGT 1 cut(s) 2195
Hsp92I GRCGYC 1 cut(s) 2601
KflI GGGWCCC 1 cut(s) 2567
KpnI GGTACC 1 cut(s) 519
KspAI GTTAAC 1 cut(s) 471
Kzo9I GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
LmnI GCTCC 5 cut(s) 475, 973, 3002, 3319, 3412
Lsp1109I GCAGC 4 cut(s) 16, 308, 2310, 2824
LweI GCATC 3 cut(s) 2952, 3412, 3549
MabI ACCWGGT 1 cut(s) 759
MaeI CTAG 7 cut(s) 2006, 2117, 2409, 2895, 3209, 3464, 3682
MaeII ACGT 1 cut(s) 2195
MaeIII GTNAC 6 cut(s) 751, 2635, 2897, 3340, 3480, 3520
MalI GATC 7 cut(s) 333, 636, 990, 1306, 2317, 2694, 3213
MboI GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
MboII GAAGA 8 cut(s) 159, 163, 896, 983, 1005, 2267, 2414, 2748
MfeI CAATTG 2 cut(s) 1183, 1988
MhlI GDGCHC 5 cut(s) 1722, 3104, 3266, 3324, 3638
MlsI TGGCCA 1 cut(s) 732
MluNI TGGCCA 1 cut(s) 732
MlyI GAGTC 2 cut(s) 43, 3667
MmeI TCCRAC 2 cut(s) 2604, 2823
Mox20I TGGCCA 1 cut(s) 732
Mph1103I ATGCAT 3 cut(s) 1828, 2561, 3576
MroXI GAANNNNTTC 4 cut(s) 1658, 1730, 1765, 1854
MscI TGGCCA 1 cut(s) 732
MslI CAYNNNNRTG 3 cut(s) 1897, 1925, 2970
Msp20I TGGCCA 1 cut(s) 732
MspA1I CMGCKG 4 cut(s) 532, 1374, 1446, 1981
MspCI CTTAAG 1 cut(s) 2657
MspI CCGG 3 cut(s) 1155, 1786, 1809
MspR9I CCNGG 7 cut(s) 704, 761, 1156, 2190, 3001, 3408, 3610
MunI CAATTG 2 cut(s) 1183, 1988
Mva1269I GAATGC 3 cut(s) 1353, 1425, 1913
MvaI CCWGG 6 cut(s) 704, 761, 2190, 3001, 3408, 3610
MvnI CGCG 1 cut(s) 3183
MwoI GCNNNNNNNGC 4 cut(s) 91, 1165, 1978, 2347
NciI CCSGG 1 cut(s) 1156
NcoI CCATGG 1 cut(s) 3516
NdeII GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
NlaIV GGNNCC 5 cut(s) 517, 1594, 2568, 2569, 3315
NmeAIII GCCGAG 1 cut(s) 2406
NmuCI GTSAC 4 cut(s) 2635, 2897, 3340, 3480
NsiI ATGCAT 3 cut(s) 1828, 2561, 3576
NspI RCATGY 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 2135
PagI TCATGA 2 cut(s) 30, 3390
PasI CCCWGGG 1 cut(s) 2189
PcsI WCGNNNNNNNCGW 1 cut(s) 3180
PctI GAATGC 3 cut(s) 1353, 1425, 1913
PdmI GAANNNNTTC 4 cut(s) 1658, 1730, 1765, 1854
PflMI CCANNNNNTGG 3 cut(s) 1250, 1466, 3609
PfoI TCCNGGA 2 cut(s) 702, 2999
PkrI GCNGC 4 cut(s) 6, 298, 2300, 2839
PleI GAGTC 2 cut(s) 43, 3667
PpsI GAGTC 2 cut(s) 43, 3667
PpuMI RGGWCCY 1 cut(s) 2567
PshAI GACNNNNGTC 1 cut(s) 3478
Psp124BI GAGCTC 2 cut(s) 3266, 3324
Psp5II RGGWCCY 1 cut(s) 2567
Psp6I CCWGG 6 cut(s) 702, 759, 2188, 2999, 3406, 3608
PspEI GGTNACC 2 cut(s) 2635, 3480
PspFI CCCAGC 1 cut(s) 3096
PspGI CCWGG 6 cut(s) 702, 759, 2188, 2999, 3406, 3608
PspN4I GGNNCC 5 cut(s) 517, 1594, 2568, 2569, 3315
PspPI GGNCC 8 cut(s) 371, 806, 869, 1157, 1593, 2290, 2459, 2567
PspPPI RGGWCCY 1 cut(s) 2567
PspXI VCTCGAGB 1 cut(s) 2135
PstI CTGCAG 2 cut(s) 298, 457
PstNI CAGNNNCTG 1 cut(s) 263
PvuII CAGCTG 2 cut(s) 532, 1981
RsaI GTAC 8 cut(s) 517, 552, 1042, 1286, 2282, 2322, 3017, 3090
RsaNI GTAC 8 cut(s) 516, 551, 1041, 1285, 2281, 2321, 3016, 3089
RseI CAYNNNNRTG 3 cut(s) 1897, 1925, 2970
SacI GAGCTC 2 cut(s) 3266, 3324
SatI GCNGC 4 cut(s) 5, 297, 2299, 2838
Sau3AI GATC 7 cut(s) 331, 634, 988, 1304, 2315, 2692, 3211
Sau96I GGNCC 8 cut(s) 371, 806, 869, 1157, 1593, 2290, 2459, 2567
ScaI AGTACT 1 cut(s) 3090
SchI GAGTC 2 cut(s) 43, 3667
ScrFI CCNGG 7 cut(s) 704, 761, 1156, 2190, 3001, 3408, 3610
SduI GDGCHC 5 cut(s) 1722, 3104, 3266, 3324, 3638
SexAI ACCWGGT 1 cut(s) 759
SfaNI GCATC 3 cut(s) 2952, 3412, 3549
SfcI CTRYAG 4 cut(s) 294, 453, 957, 3288
Sfr274I CTCGAG 1 cut(s) 2135
SinI GGWCC 5 cut(s) 869, 1593, 2290, 2459, 2567
SlaI CTCGAG 1 cut(s) 2135
SmiMI CAYNNNNRTG 3 cut(s) 1897, 1925, 2970
SmlI CTYRAG 4 cut(s) 1630, 1756, 2135, 2657
SmoI CTYRAG 4 cut(s) 1630, 1756, 2135, 2657
SsiI CCGC 4 cut(s) 1374, 1446, 2864, 3181
SspI AATATT 2 cut(s) 557, 1237
SspMI CTAG 7 cut(s) 2006, 2117, 2409, 2895, 3209, 3464, 3682
SstI GAGCTC 2 cut(s) 3266, 3324
StyD4I CCNGG 7 cut(s) 702, 759, 1154, 2188, 2999, 3406, 3608
StyI CCWWGG 5 cut(s) 414, 802, 1062, 3516, 3531
TaaI ACNGT 3 cut(s) 259, 309, 2280
TaiI ACGT 1 cut(s) 2198
TaqI TCGA 8 cut(s) 72, 330, 854, 987, 994, 1724, 2136, 2691
TaqII GACCGA 1 cut(s) 3468
TatI WGTACW 3 cut(s) 1284, 3015, 3088
TscAI CASTG 7 cut(s) 60, 264, 298, 1087, 1609, 2029, 2776
TseFI GTSAC 4 cut(s) 2635, 2897, 3340, 3480
TseI GCWGC 4 cut(s) 4, 296, 2298, 2837
Tsp45I GTSAC 4 cut(s) 2635, 2897, 3340, 3480
TspDTI ATGAA 9 cut(s) 47, 177, 1826, 1847, 2031, 2295, 2500, 2805, 3042
TspGWI ACGGA 5 cut(s) 488, 1518, 1558, 1937, 1953
TspRI CASTG 7 cut(s) 60, 264, 298, 1087, 1609, 2029, 2776
Van91I CCANNNNNTGG 3 cut(s) 1250, 1466, 3609
Vha464I CTTAAG 1 cut(s) 2657
VneI GTGCAC 1 cut(s) 1718
VpaK11BI GGWCC 5 cut(s) 869, 1593, 2290, 2459, 2567
XbaI TCTAGA 1 cut(s) 2408
XceI RCATGY 1 cut(s) 131
XcmI CCANNNNNNNNNTGG 3 cut(s) 3523, 3577, 3652
XhoI CTCGAG 1 cut(s) 2135
XmiI GTMKAC 3 cut(s) 1500, 2829, 3360
XmnI GAANNNNTTC 4 cut(s) 1658, 1730, 1765, 1854
XspI CTAG 7 cut(s) 2006, 2117, 2409, 2895, 3209, 3464, 3682
ZrmI AGTACT 1 cut(s) 3090
Zsp2I ATGCAT 3 cut(s) 1828, 2561, 3576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.