RchiOBHm_Chr6g0287171

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
50562665 .. 50566489
3825 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25761

Sequence Viewer

Length: 3711 bp
ATGAAAGCAGTTCAGGAGACTCCTCTGCATCTCCTCCTTCATATATTCTTGCTCTTTTTGCTACCATTGCAGGCCACGTCATCACAAAGAATACAAGCTGAAGCTCTCCTACAATGGAAGAACAGCTTTACTTCTTCACCACCTTCCCTGAATTCATGGTCGCTCACAAACCTAAACAACCTGTGCAACTGGTCTGCCATTGTCTGCAACCACAATACCAAAACAGTTTCCGAAATTCACCTTGCAAACTTCAACATCACCGCAGCACTAGCACAGTTCAACTTCAACAAGTTTTTCGATCTCACCCATTTCAACGTCAGTGGCAACAATTTCTCAGGGCCTATACCATCTGCCATTGGCAACCTCACCAAGCTCACAACCTTGGATTTGGGAAACAATACCTTGGAACGAGAAGTGCCTTCGGAAATGGGCAAGTTAACGGAGCTTCGGTTTCTAAGTCTCAACAACAACTATCTCAGTGGTACCATTCCCTATCAGCTGGACAATCTCAAAAAGGTACAATATTTGCTTCTTGGAGGTAACCACTTAGACACTCCTGACTGGTCTAAATTTTCAGGCTTTCCTTTGTTGAGCTACCTTGATCTTTATGGGAACAATTTAGATTCAGAGTTCCCAGAATTTATATCTGAATGTAGGAACTTGACCTTCCTGGATTTGTCTGGAAATCTTTTGACTGGCCAAATACCAAAATTGGTAGTTACCAACCTGGTCAAGCTTGAATCTCTCAATCTCACCGATAACCGATTCCAAGGGCCATTCCCATATAACTTTCCCAACATAAAGCACCTTTATTTGGAATCGAACAACTTTAGTGGTTCAATTCCTGAAGATTTTAGTTTGATATCTGGTCTTCAATTTATTAGCCTTTATAACAATTCCCTTGAAGGCAAAATCCCATCCTCTGTAGGCCAACTCAGGGAGCTTCAGCACCTAGACCTTGGATGGAATTCCTTGAACTCTTCAATCCCTTCTAAGCTTGGTCTTTGTACCAACCTAACTTATTTGTCCTTGGCTATGAATAAACTCAGTGGGAAAATTCCAGCAGAAATCGGCCTGTTGACAAAACTTGATCTCCTCCGGTTGGGCGGAAACAATTTCTCTGGATCAATTCCCTCAGAGATAGGAAACTTGAAAGTTTTGAGACAATTGAAACTTTGGGGAAACCAGCTCTCAGGGCCGATTCCTATGAAATTATGGAACCTCACAAATCTTCAGAAGCTTTCTTTAGGAAACAATAGCTTCAATGGGCATATTCCACCAGAAATTGGCCTCTTGACAAAACTTGATCTCCTCTGGTTGGGCGAAAACAATTTCTCTGGATCAATTCCCTCAGAGATAGGAAACCTGAAAGTTTTGAGAGAATTGACCCTTTGGGGAAACCAGCTCTCAGGGCCGATTCCTATGAAATTATGGAACCTCACAAATCTTCGATACATGGGCCTTTCCAAGAACAACCTCTCCGGCCCAATCCCCCCAGAGATTGGAAACATGAGTTCCTTGCTTCACTTTCAAGTCAGCGTAAACCAACTTGAAGGGGAGTTGCCAAAAACTATTTCTCACCTCAGAAACCTAGAGGGGTTTTCCGTTTTCACTAATAGATTTTGGGGGACCATTCCTAGTGATTTCGGGAAGTATAGTCCAAACTTGACATTTATTCAGTTGGCATGGAACAGCTTCTCTGGAGAATTGCCGCCCGAGTTGTGTATTGGATTTGCTTTGCAACAATTGATAGTGAACTCGAACAACTTCACAGGGCAATTGCCTGAGTGCTTGAGAAATTGTTCTGCATTAACTAGAGTCCGGCTTGAAGTAAACCAATTCACCGGAAACATCACCAATGCATTTGGTGTTCATCCCCATCTTGAAGTAATTTATCTTAGTCACAACAAGTTCGTTGGTCAACTCTCGCCACAATGGGGAGAATGCAAAAACATCACGGATATGCAAATGGATGGAAATAGAATTTCTGGTCAAATCCCACCTGAGCTTGGGCAGTTAAGACAATTGCATAAGCTAAACCTGGGCTCTAATGAATTCAGTGGGGAATTTCCAGTTGCCATTGGGAATCTAAGCTTGTTGTTCATTCTCAATCTCAGCAGGAACTACTTGACAGGAGTTATCCCTCGGTTTCTTGGCAAATTGACATGGCTTGAGTTTCTTGATTTGTCTGATAATAAATTTACAGGGGTATTACCAGTCGACCCTGGAACGTTTGAGAGGTTAATAAGCTTGAACATAAGCCACAACAAATTATCTGGTGGAATACCAGAGGAGATTGGTAATCTACACCTGCAGTACTTGTTGGACCTAAGCAGCAATACATTCTCGGGATCACTACCACTAAACCTTGCCAAGCTTATAATGCTGGAGATTCTTAATGTCTCGCATAACCAACTCTTCGGGAATATCCCATCAATATTTTCCAGAATGGATAGTCTTATCGGCATTGATTTTTCTTACAACAACTTGACAGGTCCAATCCCAACTGGTGGCATTTTCCAAAAAAAGCTTCCTAATAATGCTTTCATTGGAAATAGTGGTTTGTGTGGTGAAATAGAGGGACTAACTCCATGCACTTTGGGTCCCAAAAAGTCCAGCAAGAAAATTCTTGTTGGCGTCCTTGTTTCGATTTTTGGTTTATTGCTGATGGTGACCATATCTGCTGTAATCCTTAAGTTCTGCAAGAAATCAAAACCTGGAGAAATCGATCATCCTAAGATGTCTAAAAGTTTTGATACAAGTATTTGGGGAAGACATGGTAAACTTGCATTTTCAGAAATCATCACCGCCACCGAGAACTTTGATGAAAAGTACCTCATTGGAAGAGGAGGTTTTGGAAGTGTCTACAAGGCTGTGTTGGACAGAGGCAGAGTCGTTGCAGTTAAGAAATTGAATATGTCAGTAGAGTCTAGTGACGACATTCCAGAATCGAATCGCAAGAGTTTTGAGAATGAGATAAGAACCTTGACAGAAGTGAGGCACATAAATGTAATAAAACTATATGGTTTCTGTTCCTGGAACGGGTGCTTGTACTTGGTGTACGAATATGCAGAGAGAGGCAGTTTGAAAATGGTGTTGTATGGAGTGGAGGGCGAAGGAGAAGTACTTGGCTGGGGCACACGGGTGAATATTGTGCAAGGAATAGCTCATGCTATTTCTCACTTGCATAATAACTGCTCTCACCCAATCGTTCACCGCGACATAACTTTCAGCAACATATTACTAGATCGGGATTTCGTGCCACGCCTATCAGACTTTGGAACAGCAAGACTATTGAGCTCAAATTCCTCAAACTGGACTGCTGTAGCAGGGACTTATGGCTACATGGCTCCAGAGCTCGCATTCACAATGCAAGTGACAGATAAGTGTGATGTATACAGCTTTGGGGTGGTGGCATTAGAAATCATGATGGGAAGGCATCCAGGGGAGCTACTGACTTCTCTATCAGAGAATGGAGAATTGCTTTTGAAGGATTTGCTAGACCAACGACTTCATTCTCCTTCAAGTCAATTAGCAGTGCGAGTGGTTTCCTCAGTTACAATGGCCTTGGCCTGCGCCAGCACTAATCCAGAATCACGACCCACCATGCAATTTGTGGCAAAAGAACTATCATCAACAAGGATCTGGACTTGCCTTTCTGAGCCGTTGAGTACGGTAACCATCAATAAATTGGCAAGTTTTCATAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1236

Amino Acids

136.94

Weight (kDa)

7.0

Isoelectric Point (pI)

33.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 70 5.5e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 96 - 176 2e-07 Leucine-rich repeat region
LRR_8 PF13855 101 - 159 4.7e-06 Leucine rich repeat
LRR_8 PF13855 148 - 207 1.5e-06 Leucine rich repeat
LRR_8 PF13855 172 - 231 9.1e-08 Leucine rich repeat
LRR_14 PF23598 268 - 368 1.3e-06 Leucine-rich repeat region
LRR_14 PF23598 377 - 464 3.8e-09 Leucine-rich repeat region
LRR_14 PF23598 476 - 607 1.1e-06 Leucine-rich repeat region
LRR_8 PF13855 674 - 734 1.1e-07 Leucine rich repeat
Pkinase PF00069 943 - 1205 1.8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 946 - 1210 1.7e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 891, 2381
AarI CACCTGC 1 cut(s) 2319
Acc36I ACCTGC 1 cut(s) 2319
Acc65I GGTACC 1 cut(s) 482
AccB1I GGYRCC 1 cut(s) 482
AccB7I CCANNNNNTGG 3 cut(s) 1286, 1502, 2510
AccI GTMKAC 3 cut(s) 2220, 2865, 3396
AccII CGCG 1 cut(s) 3219
AciI CCGC 5 cut(s) 261, 1107, 1712, 2808, 3217
AclI AACGTT 1 cut(s) 2231
AclWI GGATC 4 cut(s) 1132, 1348, 2359, 3650
AcoI YGGCCR 1 cut(s) 697
AcuI CTGAAG 4 cut(s) 120, 867, 929, 1217
AcyI GRCGYC 1 cut(s) 2637
AfaI GTAC 9 cut(s) 484, 519, 1009, 2318, 2834, 3053, 3062, 3126, 3673
AflII CTTAAG 1 cut(s) 2693
AjiI CACGTC 1 cut(s) 78
AjnI CCWGG 7 cut(s) 669, 726, 2040, 2224, 2716, 3035, 3442
AjuI GAANNNNNNNTTGG 4 cut(s) 1558, 1590, 2514, 2546
AleI CACNNNNGTG 1 cut(s) 3143
AloI GAACNNNNNNTCC 2 cut(s) 1463, 1495
Alw21I GWGCWC 2 cut(s) 3302, 3360
Alw26I GTCTC 4 cut(s) 11, 464, 1156, 2407
AlwI GGATC 4 cut(s) 1132, 1348, 2359, 3650
Ama87I CYCGRG 2 cut(s) 1715, 2347
ApeKI GCWGC 2 cut(s) 263, 2334
Asp700I GAANNNNTTC 3 cut(s) 1694, 1766, 1801
Asp718I GGTACC 1 cut(s) 482
AspLEI GCGC 1 cut(s) 3578
AvaI CYCGRG 2 cut(s) 1715, 2347
AvaII GGWCC 4 cut(s) 1629, 2326, 2495, 2603
BaeGI GKGCMC 1 cut(s) 3140
BalI TGGCCA 1 cut(s) 699
BanI GGYRCC 1 cut(s) 482
BanII GRGCYC 3 cut(s) 2048, 3302, 3360
BarI GAAGNNNNNNTAC 4 cut(s) 93, 125, 3108, 3140
BbsI GAAGAC 2 cut(s) 863, 2779
Bbv12I GWGCWC 2 cut(s) 3302, 3360
BbvI GCAGC 2 cut(s) 275, 2346
BccI CCATC 9 cut(s) 355, 925, 957, 1887, 1967, 2440, 2662, 3424, 3689
BceAI ACGGC 1 cut(s) 3649
BciT130I CCWGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
BcoDI GTCTC 4 cut(s) 11, 464, 1156, 2407
BfaI CTAG 9 cut(s) 269, 953, 1592, 1638, 1815, 2931, 3245, 3500, 3709
BfmI CTRYAG 3 cut(s) 924, 2312, 3324
BfrI CTTAAG 1 cut(s) 2693
BfuAI ACCTGC 1 cut(s) 2319
BisI GCNGC 3 cut(s) 264, 1712, 2335
BlsI GCNGC 3 cut(s) 265, 1713, 2336
BmcAI AGTACT 2 cut(s) 2318, 3126
Bme1390I CCNGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
Bme18I GGWCC 4 cut(s) 1629, 2326, 2495, 2603
BmeT110I CYCGRG 2 cut(s) 1715, 2347
BmgBI CACGTC 1 cut(s) 78
BmiI GGNNCC 7 cut(s) 484, 1220, 1436, 1630, 2604, 2605, 3351
BmrFI CCNGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
BmsI GCATC 2 cut(s) 37, 3448
BpiI GAAGAC 2 cut(s) 863, 2779
BpmI CTGGAG 4 cut(s) 1722, 2408, 2739, 3336
Bpu10I CCTNAGC 2 cut(s) 2004, 2330
BpuEI CTTGAG 2 cut(s) 1813, 2192
Bsa29I ATCGAT 1 cut(s) 2727
BsaHI GRCGYC 1 cut(s) 2637
BsaWI WCCGGW 2 cut(s) 1098, 1844
BsaXI ACNNNNNCTCC 8 cut(s) 434, 464, 1077, 1107, 1293, 1323, 1463, 1493
Bse1I ACTGG 7 cut(s) 194, 566, 700, 2072, 2216, 2512, 3320
Bse3DI GCAATG 1 cut(s) 65
BseBI CCWGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
BseCI ATCGAT 1 cut(s) 2727
BseGI GGATG 6 cut(s) 917, 968, 1873, 1978, 2731, 3439
BseMI GCAATG 1 cut(s) 65
BseNI ACTGG 7 cut(s) 194, 566, 700, 2072, 2216, 2512, 3320
BseRI GAGGAG 6 cut(s) 12, 23, 1085, 1301, 2306, 2862
BseSI GKGCMC 1 cut(s) 3140
BseXI GCAGC 2 cut(s) 275, 2346
BseYI CCCAGC 1 cut(s) 3132
Bsh1236I CGCG 1 cut(s) 3219
BshNI GGYRCC 1 cut(s) 482
BshVI ATCGAT 1 cut(s) 2727
BsiHKAI GWGCWC 2 cut(s) 3302, 3360
BsiHKCI CYCGRG 2 cut(s) 1715, 2347
BsiSI CCGG 4 cut(s) 1099, 1482, 1822, 1845
BslFI GGGAC 4 cut(s) 1642, 2589, 2595, 3346
BsmAI GTCTC 4 cut(s) 11, 464, 1156, 2407
BsmFI GGGAC 4 cut(s) 1642, 2589, 2595, 3346
BsmI GAATGC 2 cut(s) 1949, 3362
BsoBI CYCGRG 2 cut(s) 1715, 2347
Bsp1286I GDGCHC 4 cut(s) 2048, 3140, 3302, 3360
BspACI CCGC 5 cut(s) 261, 1107, 1712, 2808, 3217
BspDI ATCGAT 1 cut(s) 2727
BspFNI CGCG 1 cut(s) 3219
BspHI TCATGA 1 cut(s) 3426
BspLI GGNNCC 7 cut(s) 484, 1220, 1436, 1630, 2604, 2605, 3351
BspMAI CTGCAG 1 cut(s) 2316
BspMI ACCTGC 1 cut(s) 2319
BspPI GGATC 4 cut(s) 1132, 1348, 2359, 3650
BspT107I GGYRCC 1 cut(s) 482
BspTI CTTAAG 1 cut(s) 2693
BsrDI GCAATG 1 cut(s) 65
BsrI ACTGG 7 cut(s) 194, 566, 700, 2072, 2216, 2512, 3320
BssNAI GTATAC 1 cut(s) 3397
BssNI GRCGYC 1 cut(s) 2637
BssT1I CCWWGG 6 cut(s) 381, 402, 769, 958, 1029, 3567
Bst1107I GTATAC 1 cut(s) 3397
Bst2UI CCWGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
Bst4CI ACNGT 3 cut(s) 226, 276, 3676
Bst6I CTCTTC 3 cut(s) 985, 2423, 2839
BstACI GRCGYC 1 cut(s) 2637
BstAFI CTTAAG 1 cut(s) 2693
BstC8I GCNNGC 4 cut(s) 72, 3360, 3574, 3580
BstEII GGTNACC 3 cut(s) 539, 2671, 3676
BstF5I GGATG 6 cut(s) 917, 968, 1873, 1978, 2731, 3439
BstFNI CGCG 1 cut(s) 3219
BstHHI GCGC 1 cut(s) 3578
BstMAI GTCTC 4 cut(s) 11, 464, 1156, 2407
BstMWI GCNNNNNNNGC 6 cut(s) 58, 67, 269, 1195, 1411, 2383
BstNI CCWGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
BstPI GGTNACC 3 cut(s) 539, 2671, 3676
BstSCI CCNGG 7 cut(s) 669, 726, 2040, 2224, 2716, 3035, 3442
BstSFI CTRYAG 3 cut(s) 924, 2312, 3324
BstSLI GKGCMC 1 cut(s) 3140
BstUI CGCG 1 cut(s) 3219
BstV1I GCAGC 2 cut(s) 275, 2346
BstV2I GAAGAC 2 cut(s) 863, 2779
BstX2I RGATCY 1 cut(s) 3642
BstYI RGATCY 1 cut(s) 3642
BstZ17I GTATAC 1 cut(s) 3397
Bsu15I ATCGAT 1 cut(s) 2727
BsuTUI ATCGAT 1 cut(s) 2727
BtrI CACGTC 1 cut(s) 78
BtsCI GGATG 6 cut(s) 917, 968, 1873, 1978, 2731, 3439
BtsI GCAGTG 1 cut(s) 3543
BtsIMutI CAGTG 5 cut(s) 325, 484, 1054, 2065, 3543
BveI ACCTGC 1 cut(s) 2319
Cac8I GCNNGC 4 cut(s) 72, 3360, 3574, 3580
CciI TCATGA 1 cut(s) 3426
CfoI GCGC 1 cut(s) 3578
ClaI ATCGAT 1 cut(s) 2727
CseI GACGC 1 cut(s) 2626
CsiI ACCWGGT 1 cut(s) 726
Csp6I GTAC 9 cut(s) 483, 518, 1008, 2317, 2833, 3052, 3061, 3125, 3672
CspCI CAANNNNNGTGG 4 cut(s) 301, 336, 814, 849
CviQI GTAC 9 cut(s) 483, 518, 1008, 2317, 2833, 3052, 3061, 3125, 3672
EaeI YGGCCR 1 cut(s) 697
Eam1104I CTCTTC 3 cut(s) 985, 2423, 2839
EarI CTCTTC 3 cut(s) 985, 2423, 2839
EciI GGCGGA 1 cut(s) 1122
Ecl136II GAGCTC 2 cut(s) 3300, 3358
Eco130I CCWWGG 6 cut(s) 381, 402, 769, 958, 1029, 3567
Eco24I GRGCYC 3 cut(s) 2048, 3302, 3360
Eco32I GATATC 1 cut(s) 864
Eco47I GGWCC 4 cut(s) 1629, 2326, 2495, 2603
Eco53kI GAGCTC 2 cut(s) 3300, 3358
Eco57I CTGAAG 4 cut(s) 120, 867, 929, 1217
Eco88I CYCGRG 2 cut(s) 1715, 2347
Eco91I GGTNACC 3 cut(s) 539, 2671, 3676
EcoICRI GAGCTC 2 cut(s) 3300, 3358
EcoO109I RGGNCCY 2 cut(s) 338, 2603
EcoO65I GGTNACC 3 cut(s) 539, 2671, 3676
EcoRI GAATTC 3 cut(s) 151, 967, 2054
EcoRII CCWGG 7 cut(s) 669, 726, 2040, 2224, 2716, 3035, 3442
EcoRV GATATC 1 cut(s) 864
EcoT14I CCWWGG 6 cut(s) 381, 402, 769, 958, 1029, 3567
EcoT22I ATGCAT 1 cut(s) 1864
EcoT38I GRGCYC 3 cut(s) 2048, 3302, 3360
ErhI CCWWGG 6 cut(s) 381, 402, 769, 958, 1029, 3567
FalI AAGNNNNNCTT 2 cut(s) 110, 142
FaqI GGGAC 4 cut(s) 1642, 2589, 2595, 3346
FblI GTMKAC 3 cut(s) 2220, 2865, 3396
Fnu4HI GCNGC 3 cut(s) 264, 1712, 2335
FokI GGATG 6 cut(s) 904, 975, 1860, 1985, 2718, 3426
FriOI GRGCYC 3 cut(s) 2048, 3302, 3360
Fsp4HI GCNGC 3 cut(s) 264, 1712, 2335
FspBI CTAG 9 cut(s) 269, 953, 1592, 1638, 1815, 2931, 3245, 3500, 3709
GlaI GCGC 1 cut(s) 3577
GluI GCNGC 3 cut(s) 264, 1712, 2335
GsaI CCCAGC 1 cut(s) 3136
GsuI CTGGAG 4 cut(s) 1722, 2408, 2739, 3336
HapII CCGG 4 cut(s) 1099, 1482, 1822, 1845
HgaI GACGC 1 cut(s) 2626
HhaI GCGC 1 cut(s) 3578
Hin1I GRCGYC 1 cut(s) 2637
Hin6I GCGC 1 cut(s) 3576
HinP1I GCGC 1 cut(s) 3576
HincII GTYRAC 4 cut(s) 438, 1080, 1922, 2221
HindII GTYRAC 4 cut(s) 438, 1080, 1922, 2221
HindIII AAGCTT 7 cut(s) 734, 995, 1238, 2092, 2248, 2375, 2528
HpaI GTTAAC 1 cut(s) 438
HpaII CCGG 4 cut(s) 1099, 1482, 1822, 1845
HpyCH4III ACNGT 3 cut(s) 226, 276, 3676
HpyCH4IV ACGT 3 cut(s) 77, 315, 2231
HpyF10VI GCNNNNNNNGC 6 cut(s) 58, 67, 269, 1195, 1411, 2383
HpySE526I ACGT 3 cut(s) 77, 315, 2231
Hsp92I GRCGYC 1 cut(s) 2637
HspAI GCGC 1 cut(s) 3576
KflI GGGWCCC 1 cut(s) 2603
KpnI GGTACC 1 cut(s) 486
KspAI GTTAAC 1 cut(s) 438
LmnI GCTCC 4 cut(s) 442, 940, 3355, 3448
Lsp1109I GCAGC 2 cut(s) 275, 2346
LweI GCATC 2 cut(s) 37, 3448
MabI ACCWGGT 1 cut(s) 726
MaeI CTAG 9 cut(s) 269, 953, 1592, 1638, 1815, 2931, 3245, 3500, 3709
MaeII ACGT 3 cut(s) 77, 315, 2231
MaeIII GTNAC 8 cut(s) 539, 718, 1901, 2671, 2933, 3376, 3556, 3676
MfeI CAATTG 4 cut(s) 1166, 1745, 1778, 2024
MflI RGATCY 1 cut(s) 3642
MhlI GDGCHC 4 cut(s) 2048, 3140, 3302, 3360
MlsI TGGCCA 1 cut(s) 699
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 4 cut(s) 13, 1827, 2901, 2936
MmeI TCCRAC 2 cut(s) 2304, 2859
Mox20I TGGCCA 1 cut(s) 699
Mph1103I ATGCAT 1 cut(s) 1864
MroXI GAANNNNTTC 3 cut(s) 1694, 1766, 1801
MscI TGGCCA 1 cut(s) 699
MseI TTAA 7 cut(s) 437, 1811, 2018, 2243, 2397, 2694, 2904
MslI CAYNNNNRTG 3 cut(s) 1961, 3006, 3143
Msp20I TGGCCA 1 cut(s) 699
MspA1I CMGCKG 1 cut(s) 499
MspCI CTTAAG 1 cut(s) 2693
MspI CCGG 4 cut(s) 1099, 1482, 1822, 1845
MspR9I CCNGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
MunI CAATTG 4 cut(s) 1166, 1745, 1778, 2024
Mva1269I GAATGC 2 cut(s) 1949, 3362
MvaI CCWGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
MvnI CGCG 1 cut(s) 3219
MwoI GCNNNNNNNGC 6 cut(s) 58, 67, 269, 1195, 1411, 2383
NlaIV GGNNCC 7 cut(s) 484, 1220, 1436, 1630, 2604, 2605, 3351
NmuCI GTSAC 4 cut(s) 1901, 2671, 2933, 3376
NsiI ATGCAT 1 cut(s) 1864
OliI CACNNNNGTG 1 cut(s) 3143
PagI TCATGA 1 cut(s) 3426
PaqCI CACCTGC 1 cut(s) 2319
PcsI WCGNNNNNNNCGW 1 cut(s) 3216
PctI GAATGC 2 cut(s) 1949, 3362
PdmI GAANNNNTTC 3 cut(s) 1694, 1766, 1801
PflMI CCANNNNNTGG 3 cut(s) 1286, 1502, 2510
PfoI TCCNGGA 2 cut(s) 669, 3035
PkrI GCNGC 3 cut(s) 265, 1713, 2336
PleI GAGTC 4 cut(s) 13, 1826, 2900, 2935
PpsI GAGTC 4 cut(s) 13, 1826, 2900, 2935
PpuMI RGGWCCY 1 cut(s) 2603
PsiI TTATAA 2 cut(s) 891, 2381
Psp124BI GAGCTC 2 cut(s) 3302, 3360
Psp1406I AACGTT 1 cut(s) 2231
Psp5II RGGWCCY 1 cut(s) 2603
Psp6I CCWGG 7 cut(s) 669, 726, 2040, 2224, 2716, 3035, 3442
PspEI GGTNACC 3 cut(s) 539, 2671, 3676
PspFI CCCAGC 1 cut(s) 3132
PspGI CCWGG 7 cut(s) 669, 726, 2040, 2224, 2716, 3035, 3442
PspN4I GGNNCC 7 cut(s) 484, 1220, 1436, 1630, 2604, 2605, 3351
PspPPI RGGWCCY 1 cut(s) 2603
PstI CTGCAG 1 cut(s) 2316
PsuI RGATCY 1 cut(s) 3642
PvuII CAGCTG 1 cut(s) 499
RsaI GTAC 9 cut(s) 484, 519, 1009, 2318, 2834, 3053, 3062, 3126, 3673
RsaNI GTAC 9 cut(s) 483, 518, 1008, 2317, 2833, 3052, 3061, 3125, 3672
RseI CAYNNNNRTG 3 cut(s) 1961, 3006, 3143
SacI GAGCTC 2 cut(s) 3302, 3360
SalI GTCGAC 1 cut(s) 2219
SaqAI TTAA 7 cut(s) 437, 1811, 2018, 2243, 2397, 2694, 2904
SatI GCNGC 3 cut(s) 264, 1712, 2335
ScaI AGTACT 2 cut(s) 2318, 3126
SchI GAGTC 4 cut(s) 13, 1827, 2901, 2936
ScrFI CCNGG 7 cut(s) 671, 728, 2042, 2226, 2718, 3037, 3444
SduI GDGCHC 4 cut(s) 2048, 3140, 3302, 3360
SexAI ACCWGGT 1 cut(s) 726
SfaNI GCATC 2 cut(s) 37, 3448
SfcI CTRYAG 3 cut(s) 924, 2312, 3324
SinI GGWCC 4 cut(s) 1629, 2326, 2495, 2603
SmiMI CAYNNNNRTG 3 cut(s) 1961, 3006, 3143
SmlI CTYRAG 3 cut(s) 1792, 2171, 2693
SmoI CTYRAG 3 cut(s) 1792, 2171, 2693
SsiI CCGC 5 cut(s) 261, 1107, 1712, 2808, 3217
SspI AATATT 3 cut(s) 524, 2439, 3151
SspMI CTAG 9 cut(s) 269, 953, 1592, 1638, 1815, 2931, 3245, 3500, 3709
SstI GAGCTC 2 cut(s) 3302, 3360
StyD4I CCNGG 7 cut(s) 669, 726, 2040, 2224, 2716, 3035, 3442
StyI CCWWGG 6 cut(s) 381, 402, 769, 958, 1029, 3567
TaaI ACNGT 3 cut(s) 226, 276, 3676
TaiI ACGT 3 cut(s) 80, 318, 2234
TaqI TCGA 8 cut(s) 297, 821, 1450, 1760, 2220, 2648, 2727, 2951
TatI WGTACW 3 cut(s) 2316, 3051, 3124
TauI GCSGC 1 cut(s) 1714
Tru1I TTAA 7 cut(s) 437, 1811, 2018, 2243, 2397, 2694, 2904
Tru9I TTAA 7 cut(s) 437, 1811, 2018, 2243, 2397, 2694, 2904
TscAI CASTG 5 cut(s) 325, 484, 1054, 2065, 3543
TseFI GTSAC 4 cut(s) 1901, 2671, 2933, 3376
TseI GCWGC 2 cut(s) 263, 2334
Tsp45I GTSAC 4 cut(s) 1901, 2671, 2933, 3376
TspGWI ACGGA 3 cut(s) 455, 1594, 1973
TspRI CASTG 5 cut(s) 325, 484, 1054, 2065, 3543
Van91I CCANNNNNTGG 3 cut(s) 1286, 1502, 2510
Vha464I CTTAAG 1 cut(s) 2693
VpaK11BI GGWCC 4 cut(s) 1629, 2326, 2495, 2603
XcmI CCANNNNNNNNNTGG 2 cut(s) 3613, 3688
XmiI GTMKAC 3 cut(s) 2220, 2865, 3396
XmnI GAANNNNTTC 3 cut(s) 1694, 1766, 1801
XspI CTAG 9 cut(s) 269, 953, 1592, 1638, 1815, 2931, 3245, 3500, 3709
ZrmI AGTACT 2 cut(s) 2318, 3126
Zsp2I ATGCAT 1 cut(s) 1864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.