Rh4DG153100

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000011
Physical Location & Seq
Reverse (-)
30468434 .. 30475231
6798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG153100.1

Sequence Viewer

Length: 5955 bp
ATGAGATCCTCAACTATTGAAAGAGTATGCCCTCTAGTTTATTGCCTTTTCTTGTATGTTCACCTACTTTCATCACAAAACTACTTTCCACATTTTGCTTCCGCTAGTTCAACTACCGAAGCAAACGCTCTTCTTGAATGGAAAGCCAGCTTTCTAAATCAAAACTCCCACAATAACCAGCTCAAGGATTGGATTTACCTTCCCAAGACTAATACCAATGACACCAATTCTTCCAGAAACCCCAAAGCAAAGGAGGCAAGCCCATGTATTTGGGCTGGTATTTCATGCAATGCTGCTGGAAGTGTCACCAACATAACCATTGCCAGTTTCGGTATACAAGGTACGCTACATGAATTCTCATTCTTGTCCTTCCCCAATCTCGAATATCTTGATATCAGCGTCAATAATCTCTTTGATGTCATCCCACCTCAAATCAGTTCCCTCTCAAAACTCCTTCATCTTGACCTCTCTAATAACCAGTTCTCCGGGAGAATTCCATCAGAAATTGGTCTTCAGAGAAATCTTACAATTCTCTATCTCCACAAGAATAATCTTTCTGATGTTATTCCTCCTTCGTTAGGGAACCTGAAATCGCTTGTGAATCTATCAATGAGTTATAATCTACTCAATGGTTCAATTCCAGCATCACTTGGTGATCTCATAAACATTACCAGCCTCCACCTCAGCCAAAATAACCTCCATGGCAACATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAAGGTTGGCCATCAATCAACTCAATGGTTCAATTCCGACAACATTGGGTGATCTAACCAACCTTACCACTCTCTATCTCTATTCAAATAATCTCTCAGGCACCATTCCAAAAGAGTTAGGGAATCTGAAATATTTGGTGAATCTAGATTTGAGCACCAATCAACTCAGTGGTTCAATTCCGAAGACATTGGGTAATCTAACCAACCTTACTAGTCTTAATCTCTATTTTAATAATCTTTCTAGCACAATTCCAAAAGAGTTAGGGAACTTGAAATCTTTGGTGTATCTAGCATTAGACTACAATCAACTCAGTGGTTCAATTCCGACAACATTGGGTGATCTAACCAACCTTACCAGTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCAAAAGAGTTAAGGAACTTGAAATCTTTGGTGATTCTATGGTTGAGCATCAATCAACTCAGTGGTTCAATTCCGACAATATTTGGTGATCTGACCAACCTTACCACTCTTTATCTCCATTCAAATAACCTCTCTAGCACCATTCCAAAAGAGTTAGGGAACTTGAAATCTTTGTTGGATCTAGAATTGAGTAACAATCATCTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACCGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGACACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACTGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCGAAAGAGTTAGGGAATCTGAAATCTTTGGTGGATTTAGAATTGAGCAACAATCATCTCAATGGTTCAATTCCGACAACATTGGGTGATCTGACCGACCTTACCACTCTTTATCTCCATTCAAATAACCTCTTTGGCACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAATGGTTCAATTCCGACAACATTGGGTGATCTGACTGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCGAAAGAGTTAGGGAACCTGAAATCTTTGGTGTATCTAGCATTAGACTACAATCAACTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACCAACCTTACCAGTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCAAAAGAGTTAAGGAACTTGAAATCTTTGGTGATTCTATGGTTGAGCATCAATCAACTCAGTGGTTCAATTCCGACAATATTTGGTGATCTGACCAACCTTACCACTCTTTATCTCCATTCAAATAACCTCTCTAGCACCATTCCAAAAGAGTTAGGGAACTTGAAATCTTTGTTGGATCTAGAATTGAGTAACAATCATCTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACCGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGACACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACTGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCGAAAGAGTTAGGGAATCTGAAATCTTTGGTGGATTTAGAATTGAGCAACAATCATCTCAATGGTTCAATTCCGACAACATTGGGTGATCTGACCGACCTTACCACTCTTTATCTCCATTCAAATAACCTCTTTGGCACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAATGGTTCAATTCCGACAACATTGGGTGATCTGACTGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCGAAAGAGTTAGGGAATCTGAAATCTTTGGTGGATTTAGAATTGAGCAACAATCATCTCAATGGTTCAATTCCGACAACATTGGGTGATCTGACCGACCTTACCACTCTTTATCTCCATTCAAATAACCTCTTTGGCACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAATGGTTCAATTCCGACAACATTGGGTGATCTGACTGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCGAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATTTAGAATTGAGCAACAATCAACTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACCGACCTTACCACTCTTTATCTCCATTCAAATAACCTCTCTGGCACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAATGGTTCAATTTTGACAACATTGGGTGATCTGACCGACCTTACCACTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCGAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATTTAGAATTGAGCAACAATCATCTCAGTGGTTCAATTCCGACAACCTTGGGTGATCTGACCGACCTTACCACTCTTTATCTCCATTCAAATAACCTCTCTGGCACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACCGACCTTTCCACTCTTTATCTAGATTCAAATAATCTCTCTGGCACCATTCCAAAAGAGTTAGGGAATCTGAAATCTTTGGTGGATCTAGAATTGAGCAACAATCATCTCAGTGGTTCAATTCCTACAACATTGGGTGATCTGACTGACCTTACCACTCTTGATCTCCATTCAAATAACCTCTCTGGCACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGTGGGTCTAGAATTGAGCTTCAATCATCTTAGTGGTTCAATTCCGAGAACATTGGGTGATCTGACCAACCTTACTGCTCTCCATCTCGGTTCAAATAATCTCTCTGGCACTATTCCAAAAGAGTTAGGGAACCTGCAATCTTTGGTGGATCTAGAATTGAGCATCAATCATCTCAGTGGTTCAATTCCGACAACATTGGGTGATCTGACCAACCTTACTGCTCTCTATCTCGGTTCAAATAATCTCTCTGGCACCATTCCAACAGAGTTAGGGAATCTGAAATATTTGGTGGGTCTAGATTTGTGCTACAATCAACTCAGTGGTTCAATTCTGTCAACATTGGGTGATCTGACCCACCTTACCACTCTTTATCTTTATTCAAATAAACTCTCTGGCACCATTCCAAAAGAGTTAGGGAACCTGAAATCTTTGGCAGATCTACAATTGCGCATCAATCAACTTACTGGTTCTATACCAGCTGAGATTGGAAACGCAACCCAAATTAATGTGCTGGATCTTTCATCAAATGGTTTAGTCGGGACAATTCCAAAGGAATTTGGGGGATTAACTTCAATGGTGAAACTGATGTTGGATGGCAATCAACTTTCAGGTCGTGTCCCTTTAGAGTTGAAATCATTAATTGATCTAGAATATCTTGATGTATCAACAAATAAATTGAATGATTCAATTCCAAGCTTTGTAGGTGACTTTCATAAGTTATATTACTTGAATTTGAGCAACAACAAGTTCAGTCAAGCAATTCCATTTCAGTTGGGGAAGTTATTTCAACTATCCCAACTAGATTTGAGTTTTAACGCACTTGAAGGTCATATACCATCAGATGTAAGCAAAATGCAGAGTCTAGAGATACTTAATATATCCCACAACAATCTTTTTGGTTTCATTCCAACAAGTATGGAAGACATGCATGGGCTAACGTATGTTGACATATCCTACAATCACTTGGAAGGTCCACTTCCCAACATCAAAGCATTTCTAGCTGCTCCTCCAGAAGCATTGCAAGGCAACAAGGGCTTGTGTGGCAACTCAAGTTTTTTGCAACTTTGCAATAATGAAAGCCCAAAAAAAGACCATAAACTCATACTTCTGATGATCTTCCATGTTCTTAGAGCAATTGCACTTCTAGCCTTTATATTTGCTTTTGTAGCAAAAAGGAAAAAGAAGCATCAGCATCTAGAAGAAAAAAACAGGGATGACGAAATTTCTTTTTCGATATTGAAGTTTGATGGGAAGACGATGTATGAGGAAATCATAAGGGCAACAAAAGATTTTGATTCTATGTATTGCATAGGGAAGGGAGAACATGGAACTGTCTACAAAGCAACTTTGTCAAATGCTAACACAGTAGCTGTGAAGAAACTCCATTTGTTATGCGCTGATGGCGAGAATCTTCAAAAAGAATTCTTGAATGAAATCAGGGCACTAACTGAGATGCGACACCGAAATATTGTGAAGCTTTATGGTTTTTGTTCACATAGGTGTCACTCATTTTTGGTGTATGAGTATCTTGAGAAGGGTAGTTTGGCTAGAGTGTTGAGCAAGGTTCAGGAAGCTAAAGAACTAGGGTGGAGTGAAAGGGTGAATATCGTGAAAGGTGTAGTTCTTGCCTTGTGTTACATGCATCATGATTGCTTGCCACCAATTGTACATCGGGATATATCGAGCAAGAACATTTTACTGGATGCAGAGTATGAGGCTTGCGTTTCAGACTTTGGCACTGCTAAGTTCTTAAACCCAAACTCAGCTAATTGGACTGCCCTTGTAGGCACATATGGATATGTTGCACCAGAGCTTGCTTATACAATGGAAGTGAATGAGAAGTGTGACGTTTATAGCTTTGGAGTGTTGACATTGGAAATAATTATGGGAAGACATCCTGGAGATCTTCTGTCATCTTTATCATCGTCCTCATCAACTGCATTACCTGCCATTGAAATGCCAATTGTGGATGTTTTAGACCAACGCATATCACCTCCCACTGGTCAAGTTACAGGGGAAGTGCTCTCTATTGTGAAGATAGCATTTTCATGCCTGAATTCCAGTCCTCAATCTCGTCCAACAATGAAACAAGTTTATCAACAATTGGAAACTCAAAGGCTACATTTGTCAAGGCCACTACATATGATAACATGTGGTGAATTGTTTGCTCTCAAGGGTTTGACTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1984

Amino Acids

215.63

Weight (kDa)

5.16

Isoelectric Point (pI)

18.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 126 - 229 1.7e-06 Leucine-rich repeat region
LRR_8 PF13855 173 - 233 4.1e-06 Leucine rich repeat
LRR_14 PF23598 216 - 329 1e-10 Leucine-rich repeat region
LRR_8 PF13855 295 - 353 2.4e-06 Leucine rich repeat
LRR_14 PF23598 331 - 420 3.3e-08 Leucine-rich repeat region
LRR_8 PF13855 390 - 449 8.5e-06 Leucine rich repeat
LRR_14 PF23598 411 - 518 9.8e-11 Leucine-rich repeat region
LRR_8 PF13855 413 - 473 9.1e-08 Leucine rich repeat
LRR_8 PF13855 463 - 521 8.9e-08 Leucine rich repeat
LRR_8 PF13855 511 - 569 4.7e-07 Leucine rich repeat
LRR_14 PF23598 523 - 614 1e-09 Leucine-rich repeat region
LRR_8 PF13855 559 - 617 7.5e-07 Leucine rich repeat
LRR_8 PF13855 582 - 641 1e-06 Leucine rich repeat
LRR_8 PF13855 607 - 665 2.2e-08 Leucine rich repeat
LRR_14 PF23598 619 - 708 2.4e-08 Leucine-rich repeat region
LRR_8 PF13855 678 - 737 6.2e-06 Leucine rich repeat
LRR_14 PF23598 700 - 806 1.9e-10 Leucine-rich repeat region
LRR_8 PF13855 751 - 809 8.8e-08 Leucine rich repeat
LRR_8 PF13855 799 - 857 4.7e-07 Leucine rich repeat
LRR_14 PF23598 811 - 902 1.1e-09 Leucine-rich repeat region
LRR_8 PF13855 847 - 905 9.4e-07 Leucine rich repeat
LRR_8 PF13855 895 - 953 5.7e-07 Leucine rich repeat
LRR_14 PF23598 907 - 998 1e-09 Leucine-rich repeat region
LRR_8 PF13855 943 - 1001 8.5e-07 Leucine rich repeat
LRR_8 PF13855 966 - 1025 4e-06 Leucine rich repeat
LRR_14 PF23598 1003 - 1094 4.1e-10 Leucine-rich repeat region
LRR_8 PF13855 1014 - 1073 2.4e-06 Leucine rich repeat
LRR_14 PF23598 1099 - 1190 1.1e-09 Leucine-rich repeat region
LRR_8 PF13855 1110 - 1169 2.5e-06 Leucine rich repeat
LRR_14 PF23598 1130 - 1239 1e-10 Leucine-rich repeat region
LRR_8 PF13855 1135 - 1193 8.3e-07 Leucine rich repeat
LRR_8 PF13855 1158 - 1217 7.1e-06 Leucine rich repeat
LRR_8 PF13855 1206 - 1265 4.6e-06 Leucine rich repeat
LRR_8 PF13855 1231 - 1289 2.5e-06 Leucine rich repeat
LRR_14 PF23598 1243 - 1332 9.5e-09 Leucine-rich repeat region
LRR_8 PF13855 1277 - 1337 6.4e-06 Leucine rich repeat
LRR_14 PF23598 1321 - 1405 1.6e-06 Leucine-rich repeat region
LRR_14 PF23598 1391 - 1492 2.8e-06 Leucine-rich repeat region
LRR_8 PF13855 1518 - 1577 3.3e-07 Leucine rich repeat
Pkinase PF00069 1691 - 1956 2.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1692 - 1957 3.3e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
Acc16I TGCGCA 1 cut(s) 4214
Acc36I ACCTGC 2 cut(s) 3906, 5719
AccI GTMKAC 2 cut(s) 334, 5100
AciI CCGC 1 cut(s) 102
AcoI YGGCCR 1 cut(s) 756
AcsI RAATTY 7 cut(s) 353, 492, 4319, 4495, 4986, 5186, 5821
AcuI CTGAAG 1 cut(s) 497
AdeI CACNNNGTG 1 cut(s) 653
AfaI GTAC 2 cut(s) 343, 5433
AfiI CCNNNNNNNGG 3 cut(s) 184, 578, 5765
AflIII ACRYGT 1 cut(s) 5915
AhlI ACTAGT 1 cut(s) 959
AjnI CCWGG 1 cut(s) 5662
AjuI GAANNNNNNNTTGG 8 cut(s) 1301, 1333, 2165, 2197, 4337, 4369, 5291, 5323
AleI CACNNNNGTG 1 cut(s) 5263
Alw21I GWGCWC 2 cut(s) 905, 5790
AlwNI CAGNNNCTG 1 cut(s) 5135
AoxI GGCC 2 cut(s) 756, 5897
ApeKI GCWGC 2 cut(s) 293, 4766
ApoI RAATTY 7 cut(s) 353, 492, 4319, 4495, 4986, 5186, 5821
AseI ATTAAT 2 cut(s) 4269, 4403
AspLEI GCGC 2 cut(s) 4215, 5162
AspS9I GGNCC 1 cut(s) 4736
AsuC2I CCSGG 1 cut(s) 487
AvaII GGWCC 1 cut(s) 4736
BaeGI GKGCMC 1 cut(s) 5209
BalI TGGCCA 1 cut(s) 758
BarI GAAGNNNNNNTAC 2 cut(s) 4581, 4613
BbsI GAAGAC 5 cut(s) 503, 938, 4692, 5024, 5662
Bbv12I GWGCWC 2 cut(s) 905, 5790
BbvCI CCTCAGC 1 cut(s) 683
BbvI GCAGC 2 cut(s) 280, 4753
BccI CCATC 7 cut(s) 505, 767, 3855, 4352, 4609, 5006, 5159
BciT130I CCWGG 1 cut(s) 5664
BcnI CCSGG 1 cut(s) 487
BcuI ACTAGT 1 cut(s) 959
BfuAI ACCTGC 2 cut(s) 3906, 5719
BglII AGATCT 2 cut(s) 4201, 5668
BisI GCNGC 2 cut(s) 294, 4767
BlsI GCNGC 2 cut(s) 295, 4768
Bme1390I CCNGG 2 cut(s) 487, 5664
Bme18I GGWCC 1 cut(s) 4736
BmgT120I GGNCC 1 cut(s) 4736
BmrFI CCNGG 2 cut(s) 487, 5664
BpiI GAAGAC 5 cut(s) 503, 938, 4692, 5024, 5662
BpmI CTGGAG 2 cut(s) 4758, 5685
Bpu10I CCTNAGC 1 cut(s) 683
BpuEI CTTGAG 4 cut(s) 167, 4798, 5315, 5921
BpuMI CCSGG 1 cut(s) 487
BsaBI GATNNNNATC 1 cut(s) 4362
BsaJI CCNNGG 2 cut(s) 700, 3384
BsaXI ACNNNNNCTCC 2 cut(s) 467, 497
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 578, 5765
Bse1I ACTGG 8 cut(s) 324, 478, 1104, 1968, 4234, 5469, 5770, 5826
Bse3DI GCAATG 3 cut(s) 295, 318, 4781
Bse8I GATNNNNATC 1 cut(s) 4362
BseBI CCWGG 1 cut(s) 5664
BseDI CCNNGG 2 cut(s) 700, 3384
BseGI GGATG 6 cut(s) 420, 4363, 4984, 5473, 5659, 5740
BseJI GATNNNNATC 1 cut(s) 4362
BseLI CCNNNNNNNGG 3 cut(s) 184, 578, 5765
BseMI GCAATG 3 cut(s) 295, 318, 4781
BseNI ACTGG 8 cut(s) 324, 478, 1104, 1968, 4234, 5469, 5770, 5826
BseRI GAGGAG 1 cut(s) 4761
BseSI GKGCMC 1 cut(s) 5209
BseXI GCAGC 2 cut(s) 280, 4753
BshFI GGCC 2 cut(s) 758, 5899
BsiHKAI GWGCWC 2 cut(s) 905, 5790
BsiSI CCGG 1 cut(s) 486
BslFI GGGAC 2 cut(s) 4318, 4367
BslI CCNNNNNNNGG 3 cut(s) 184, 578, 5765
BsmFI GGGAC 2 cut(s) 4318, 4367
BsnI GGCC 2 cut(s) 758, 5899
Bsp1286I GDGCHC 3 cut(s) 905, 5209, 5790
Bsp1407I TGTACA 1 cut(s) 5431
Bsp19I CCATGG 1 cut(s) 700
BspACI CCGC 1 cut(s) 102
BspANI GGCC 2 cut(s) 758, 5899
BspHI TCATGA 1 cut(s) 5410
BspMI ACCTGC 2 cut(s) 3906, 5719
BspQI GCTCTTC 1 cut(s) 135
BsrDI GCAATG 3 cut(s) 295, 318, 4781
BsrGI TGTACA 1 cut(s) 5431
BsrI ACTGG 8 cut(s) 324, 478, 1104, 1968, 4234, 5469, 5770, 5826
BssECI CCNNGG 2 cut(s) 700, 3384
BssNAI GTATAC 1 cut(s) 335
BssT1I CCWWGG 2 cut(s) 700, 3384
Bst1107I GTATAC 1 cut(s) 335
Bst2UI CCWGG 1 cut(s) 5664
Bst4CI ACNGT 2 cut(s) 5098, 5131
Bst6I CTCTTC 1 cut(s) 135
BstAPI GCANNNNNTGC 1 cut(s) 5711
BstAUI TGTACA 1 cut(s) 5431
BstC8I GCNNGC 5 cut(s) 148, 259, 5420, 5485, 5580
BstDSI CCRYGG 1 cut(s) 700
BstENI CCTNNNNNAGG 1 cut(s) 576
BstF5I GGATG 6 cut(s) 420, 4363, 4984, 5473, 5659, 5740
BstHHI GCGC 2 cut(s) 4215, 5162
BstMWI GCNNNNNNNGC 8 cut(s) 254, 4763, 4797, 4806, 4910, 4931, 5166, 5711
BstNI CCWGG 1 cut(s) 5664
BstNSI RCATGY 3 cut(s) 4693, 5407, 5919
BstSCI CCNGG 2 cut(s) 485, 5662
BstSLI GKGCMC 1 cut(s) 5209
BstV1I GCAGC 2 cut(s) 280, 4753
BstV2I GAAGAC 5 cut(s) 503, 938, 4692, 5024, 5662
BstXI CCANNNNNNTGG 1 cut(s) 270
BstZ17I GTATAC 1 cut(s) 335
BsuRI GGCC 2 cut(s) 758, 5899
BtgI CCRYGG 1 cut(s) 700
BtsCI GGATG 6 cut(s) 420, 4363, 4984, 5473, 5659, 5740
BtsI GCAGTG 1 cut(s) 5502
BveI ACCTGC 2 cut(s) 3906, 5719
Cac8I GCNNGC 5 cut(s) 148, 259, 5420, 5485, 5580
CaiI CAGNNNCTG 1 cut(s) 5135
CciI TCATGA 1 cut(s) 5410
CfoI GCGC 2 cut(s) 4215, 5162
Cfr13I GGNCC 1 cut(s) 4736
CseI GACGC 1 cut(s) 388
Csp6I GTAC 2 cut(s) 342, 5432
CviQI GTAC 2 cut(s) 342, 5432
DraIII CACNNNGTG 1 cut(s) 653
EaeI YGGCCR 1 cut(s) 756
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
Eco130I CCWWGG 2 cut(s) 700, 3384
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 1 cut(s) 4736
Eco57I CTGAAG 1 cut(s) 497
EcoNI CCTNNNNNAGG 1 cut(s) 576
EcoRI GAATTC 4 cut(s) 353, 492, 5186, 5821
EcoRII CCWGG 1 cut(s) 5662
EcoRV GATATC 1 cut(s) 394
EcoT14I CCWWGG 2 cut(s) 700, 3384
EcoT22I ATGCAT 2 cut(s) 4695, 5409
ErhI CCWWGG 2 cut(s) 700, 3384
FalI AAGNNNNNCTT 2 cut(s) 4725, 4757
FaqI GGGAC 2 cut(s) 4318, 4367
FauNDI CATATG 2 cut(s) 5557, 5907
FblI GTMKAC 2 cut(s) 334, 5100
Fnu4HI GCNGC 2 cut(s) 294, 4767
FokI GGATG 6 cut(s) 407, 4370, 4991, 5480, 5646, 5747
Fsp4HI GCNGC 2 cut(s) 294, 4767
FspI TGCGCA 1 cut(s) 4214
GlaI GCGC 2 cut(s) 4214, 5161
GluI GCNGC 2 cut(s) 294, 4767
GsuI CTGGAG 2 cut(s) 4758, 5685
HaeIII GGCC 2 cut(s) 758, 5899
HapII CCGG 1 cut(s) 486
HgaI GACGC 1 cut(s) 388
HhaI GCGC 2 cut(s) 4215, 5162
Hin6I GCGC 2 cut(s) 4213, 5160
HinP1I GCGC 2 cut(s) 4213, 5160
HincII GTYRAC 3 cut(s) 4101, 4711, 5634
HindII GTYRAC 3 cut(s) 4101, 4711, 5634
HindIII AAGCTT 2 cut(s) 4459, 5240
HpaII CCGG 1 cut(s) 486
Hpy166II GTNNAC 8 cut(s) 61, 335, 4101, 4711, 4739, 5101, 5258, 5634
Hpy8I GTNNAC 8 cut(s) 61, 335, 4101, 4711, 4739, 5101, 5258, 5634
HpyAV CCTTC 8 cut(s) 209, 379, 464, 582, 4583, 4727, 5074, 5293
HpyCH4III ACNGT 2 cut(s) 5098, 5131
HpyCH4IV ACGT 2 cut(s) 4703, 5613
HpyF10VI GCNNNNNNNGC 8 cut(s) 254, 4763, 4797, 4806, 4910, 4931, 5166, 5711
HpySE526I ACGT 2 cut(s) 4703, 5613
HspAI GCGC 2 cut(s) 4213, 5160
LguI GCTCTTC 1 cut(s) 135
LmnI GCTCC 1 cut(s) 4774
Lsp1109I GCAGC 2 cut(s) 280, 4753
MaeII ACGT 2 cut(s) 4703, 5613
MaeIII GTNAC 8 cut(s) 304, 1334, 2198, 4469, 5267, 5399, 5609, 5773
MfeI CAATTG 5 cut(s) 4208, 4899, 5427, 5727, 5867
MhlI GDGCHC 3 cut(s) 905, 5209, 5790
MlsI TGGCCA 1 cut(s) 758
MluNI TGGCCA 1 cut(s) 758
MlyI GAGTC 1 cut(s) 4633
Mox20I TGGCCA 1 cut(s) 758
Mph1103I ATGCAT 2 cut(s) 4695, 5409
MscI TGGCCA 1 cut(s) 758
Msp20I TGGCCA 1 cut(s) 758
MspA1I CMGCKG 1 cut(s) 4244
MspI CCGG 1 cut(s) 486
MspR9I CCNGG 2 cut(s) 487, 5664
MunI CAATTG 5 cut(s) 4208, 4899, 5427, 5727, 5867
MvaI CCWGG 1 cut(s) 5664
MwoI GCNNNNNNNGC 8 cut(s) 254, 4763, 4797, 4806, 4910, 4931, 5166, 5711
NciI CCSGG 1 cut(s) 487
NcoI CCATGG 1 cut(s) 700
NdeI CATATG 2 cut(s) 5557, 5907
NmuCI GTSAC 4 cut(s) 304, 4469, 5267, 5609
NsbI TGCGCA 1 cut(s) 4214
NsiI ATGCAT 2 cut(s) 4695, 5409
NspI RCATGY 3 cut(s) 4693, 5407, 5919
OliI CACNNNNGTG 1 cut(s) 5263
PagI TCATGA 1 cut(s) 5410
PciI ACATGT 1 cut(s) 5915
PciSI GCTCTTC 1 cut(s) 135
PfoI TCCNGGA 2 cut(s) 485, 5662
PkrI GCNGC 2 cut(s) 295, 4768
PleI GAGTC 1 cut(s) 4632
PpsI GAGTC 1 cut(s) 4632
PscI ACATGT 1 cut(s) 5915
PshBI ATTAAT 2 cut(s) 4269, 4403
PsiI TTATAA 1 cut(s) 618
Psp6I CCWGG 1 cut(s) 5662
PspGI CCWGG 1 cut(s) 5662
PspPI GGNCC 1 cut(s) 4736
PstNI CAGNNNCTG 1 cut(s) 5135
PvuII CAGCTG 1 cut(s) 4244
RsaI GTAC 2 cut(s) 343, 5433
RsaNI GTAC 2 cut(s) 342, 5432
SapI GCTCTTC 1 cut(s) 135
SatI GCNGC 2 cut(s) 294, 4767
Sau96I GGNCC 1 cut(s) 4736
SchI GAGTC 1 cut(s) 4633
ScrFI CCNGG 2 cut(s) 487, 5664
SduI GDGCHC 3 cut(s) 905, 5209, 5790
SinI GGWCC 1 cut(s) 4736
SmlI CTYRAG 4 cut(s) 182, 4813, 5294, 5936
SmoI CTYRAG 4 cut(s) 182, 4813, 5294, 5936
SpeI ACTAGT 1 cut(s) 959
SsiI CCGC 1 cut(s) 102
SspI AATATT 5 cut(s) 881, 1224, 2088, 4049, 5233
StyD4I CCNGG 2 cut(s) 485, 5662
StyI CCWWGG 2 cut(s) 700, 3384
TaaI ACNGT 2 cut(s) 5098, 5131
TaiI ACGT 2 cut(s) 4706, 5616
TaqI TCGA 3 cut(s) 381, 4997, 5447
TaqII GACCGA 9 cut(s) 1397, 1685, 2261, 2549, 2837, 3125, 3269, 3413, 3557
TatI WGTACW 1 cut(s) 5431
TseFI GTSAC 4 cut(s) 304, 4469, 5267, 5609
TseI GCWGC 2 cut(s) 293, 4766
Tsp45I GTSAC 4 cut(s) 304, 4469, 5267, 5609
VpaK11BI GGWCC 1 cut(s) 4736
VspI ATTAAT 2 cut(s) 4269, 4403
XagI CCTNNNNNAGG 1 cut(s) 576
XapI RAATTY 7 cut(s) 353, 492, 4319, 4495, 4986, 5186, 5821
XceI RCATGY 3 cut(s) 4693, 5407, 5919
XmiI GTMKAC 2 cut(s) 334, 5100
Zsp2I ATGCAT 2 cut(s) 4695, 5409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.