Prupe.3G171200_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
18995310 .. 18998969
3660 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G171200.1

Sequence Viewer

Length: 2793 bp
ATGGCATCCCAAAAAGAGAAACCACTTTCTGCTAATGTTGCTGCTTCACAGCATTCATTTCAAGTCATCCTAATGGCTATTATTCTCATGTTGGTTTCTTCTTGTTTAGCACCTTCAGCTTCAGCTGCAGGACCGGAAGCAGAGGCTCTCCTGAATTGGAAGGCTAGCCTTGACAACACAAGCCTGTCTCTCTTGTCTTCATGGGTTGGAAACAGCACTTGCAATTGGGATGGGATTGGTTGCAACAATATTGGAAGCATCACTCAGATAAACCTCACTGGTTCTGGTTTAAGAGGTACACTTCATTCATTCAGTTTCTCATCTTTCCCCAGTCTCCTAAGCCTTAACTTGAGCCATAACTCAATTTCTGGAAGAATCCCATCAGAAATAGGTTTTCTGAAAAGTCTTCAAATCCTTGATCTTTCTGAAAATAACCTTAATGGGTCCATTCCCCATGAAGTTGGTTTATTGGGAAACTTAACCATTCTTTCTCTTCATAACAATGAACTTTCTGGAAATATCCCTCTGGAAATATGTATGCTGAATTCACTCAGTGTGATTCATATAGAGAAAAACAGTCTCACAGGTTCAATTCCAGAATCAATTGGAAACCTGTCAAACTTAACTGTTCTAGCTCTTCATCGCAACAATTTCTCTGGCTCAATTCCTTCAAGCATAGGAAACCTGACTAGGCTGAAGGAGTTGTACCTGATGGGTAATCAATTAACTGGAACCATTCCAAATGAAGTAGGAAAGCTTCAGTTTCTTACCCTTCTAGGGTTGGTAGATAACAGACTAAATGGCTCCCTTCCTTTAGAATTGAGCAATCTTAAATTTTTGAAGCACCTGTGGCTGAGTGGCAACAACTTGTCTGGTAATATTCCCCCAGATTTATGCAGTGGTGGATTACTTGAAATGTTTACAGCACATCACAATCAGTTGACAGGCCTCATGCCTACAAGCTTGAGAAACTGCACCAGCTTAGTTAGATTGAGGCTTGAAAGAAACCAGCTAACAGGAAACATAAATGAAGAGTTTGGCATTTATCCAAAATTAGTTTATGTCGACCTCAGTTATAACAGATTCTATGGAGAACTTTCTGAAAACTGGGGAGAGTGTCAAAACTTACAAAGCTTGAAGCTCAGCAATAACAGAATTTCCGGAAGAGTTCCTCAGTTTGAGGGATCAATTCAGCTGCATATACTTGACCTCTCTTCGAATAATCTCACTGGGACAATCTCAAGGGAACTAGGGAGGTTGACATCCTTGTTCAACCTTAACCTGGGTGATAATAAACTTTCGGGTAGTGTTCCACCAGAAATTGGAATGTTAACCGATCTACAACAACTTAACTTAGCAGCCAATGATTTCAATGGACCAATTCCAGAACAATTAGATGGGTGCAGAGAGTTACTGAACTTGAATTTGAGCAAAAATAAATTCAGTGAGAGCATTCCTCTTCGGATGGGAAGCATGCATTCTCTTCAAGTTCTTGATCTTAGTCAAAATTCCCTGATGAAGGAAATACCGCCACAGCTTGGACAATTGGTAAAGTTGGAAGCATTGAATCTCTCCCATAATGAGCTCTCTGGTTCAATCCCATATACCTTTGATAATATGTTGAGCTTGACAGTTATTGACCTATCCTTCAATCATTTGGAGGGTCCTCTTCCCAACAACAAAGCATTCCTTGAGGCTTCAGCTGTAGCTTTTGTGAATAACACAGGCCTGTGTGGTAATGCCACTGGTTTGAACACTTGCCCGTCTGAAACAAGAGGAGGGAAAAAGGGCAGCAAATCAGTTATATTCATCATAGTCTTTGTTTTAGCCATCCTCTTTTTTGCATTTGTAGTATTTGGGATTCTTTGTGTGTGTTGCTATTCGCAAGAAGCGCAAAATGAAAACCAATTCGCAGTTTGGAGCTATGATGGAAGATTGGAGTATGAAGACATCATTGAAGCTACAGAGGAATTCAACTCCAAATATTGTGTAGGAGTGGGAGGGAATGCAAGTGTTTATAAAGCTGAGCTGCAAACAGGTCGGATTGTTGCAGTAAAGAAACTTCACATTGTACAAGATAGTGGAGTAGCAAATTTCAAGGCTTTTGAGAATGAGGTTCGTACTCTTTCAGAAATTCGTCACCGCAACATATTGAAGCTCTATGGTTTTTGTTCACATCCACAACACCCTCTTTTGGTTTACGATTTCATAGAAGGGGGGAGCCTGGAAAACATATTGACTGACGAAAACCATGCCTTTAAGTTTGGATGGATTGAGAGAGTGAATGTTGTCAAAGATGTGGCTAATGCATTATCTTATATGCATCATGATTGTTCACCTGCAATATTGCATCGAGACATATCGAGCAAGAATATCTTGCTGGACTTAGAGTATGGGGCTTATGTCTCGGATTTTGGTACAGCTAAGCTCTTGAAGGCTGACACTTCGAATTGGACTTCATTTGCAGGCACATTTGGATACAGTGCTCCAGAGTTGGCATACACAATGGAAACGAATGAGAAATGTGATGTTTATAGTTTTGGAGTGGTAGCATTAGAAGTGATCATGGGAAAGCATCCTGGAGATCTCATCTCCTATTTTTTGTCACTCTCATTAACATCAACAGCCCAACCTATACAACTCAAGGACGTTTTGGACCCCCGCCTCTCACCTCCTGGAAATCATGTTGTTGAAAAGGTGGTCACTGTTGTAAACCTTGCATTTGCTTGCTTGCGAACAAATCCACAATCTCGACCAACCATGCAACAAATTTCCCATGAGTTGTTATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

931

Amino Acids

101.75

Weight (kDa)

5.65

Isoelectric Point (pI)

35.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1077, 2019
AarI CACCTGC 1 cut(s) 2347
Acc36I ACCTGC 1 cut(s) 2347
AccB7I CCANNNNNTGG 2 cut(s) 1322, 1538
AccI GTMKAC 1 cut(s) 1065
AccIII TCCGGA 1 cut(s) 1160
AciI CCGC 3 cut(s) 1529, 2143, 2662
AclWI GGATC 1 cut(s) 1192
AcuI CTGAAG 5 cut(s) 99, 105, 716, 743, 1683
AdeI CACNNNGTG 1 cut(s) 554
AfaI GTAC 5 cut(s) 298, 707, 2073, 2122, 2419
AfiI CCNNNNNNNGG 6 cut(s) 777, 1282, 1322, 1519, 1538, 2194
AjnI CCWGG 4 cut(s) 1281, 2223, 2578, 2674
Alw21I GWGCWC 2 cut(s) 1587, 2488
Alw26I GTCTC 5 cut(s) 192, 338, 584, 2349, 2410
AlwI GGATC 1 cut(s) 1192
Aor13HI TCCGGA 1 cut(s) 1160
AoxI GGCC 2 cut(s) 946, 1726
ApeKI GCWGC 6 cut(s) 41, 125, 1195, 1358, 1791, 2029
AspLEI GCGC 1 cut(s) 1894
AspS9I GGNCC 5 cut(s) 131, 444, 1376, 1664, 2656
AsuHPI GGTGA 4 cut(s) 1298, 2132, 2328, 2661
AsuII TTCGAA 2 cut(s) 1217, 2447
AsuNHI GCTAGC 1 cut(s) 164
AvaII GGWCC 5 cut(s) 131, 444, 1376, 1664, 2656
BanII GRGCYC 1 cut(s) 1587
BarI GAAGNNNNNNTAC 6 cut(s) 689, 721, 741, 773, 2046, 2078
BbsI GAAGAC 3 cut(s) 189, 398, 1953
Bbv12I GWGCWC 2 cut(s) 1587, 2488
BbvI GCAGC 6 cut(s) 28, 112, 1182, 1370, 1803, 2016
BccI CCATC 8 cut(s) 224, 388, 706, 1391, 1459, 1838, 1922, 2262
BcgI CGANNNNNNTGC 4 cut(s) 2021, 2055, 2234, 2268
BciT130I CCWGG 4 cut(s) 1283, 2225, 2580, 2676
BciVI GTATCC 1 cut(s) 2471
BclI TGATCA 1 cut(s) 2562
BcoDI GTCTC 5 cut(s) 192, 338, 584, 2349, 2410
BfaI CTAG 5 cut(s) 165, 632, 690, 776, 1250
BfmI CTRYAG 3 cut(s) 126, 1704, 1962
BfuAI ACCTGC 1 cut(s) 2347
BfuI GTATCC 1 cut(s) 2471
BglII AGATCT 1 cut(s) 2584
BisI GCNGC 6 cut(s) 42, 126, 1196, 1359, 1792, 2030
BlpI GCTNAGC 3 cut(s) 1142, 2025, 2424
BlsI GCNGC 6 cut(s) 43, 127, 1197, 1360, 1793, 2031
Bme1390I CCNGG 4 cut(s) 1283, 2225, 2580, 2676
Bme18I GGWCC 5 cut(s) 131, 444, 1376, 1664, 2656
BmgT120I GGNCC 5 cut(s) 131, 444, 1376, 1664, 2656
BmiI GGNNCC 6 cut(s) 445, 733, 805, 1665, 2222, 2658
BmrFI CCNGG 4 cut(s) 1283, 2225, 2580, 2676
BmrI ACTGGG 3 cut(s) 324, 1117, 1239
BmsI GCATC 5 cut(s) 14, 267, 2332, 2359, 2584
BmtI GCTAGC 1 cut(s) 168
BmuI ACTGGG 3 cut(s) 324, 1117, 1239
BpiI GAAGAC 3 cut(s) 189, 398, 1953
BplI GAGNNNNNCTC 2 cut(s) 1441, 1473
BpmI CTGGAG 2 cut(s) 2472, 2601
Bpu10I CCTNAGC 1 cut(s) 338
Bpu1102I GCTNAGC 3 cut(s) 1142, 2025, 2424
Bpu14I TTCGAA 2 cut(s) 1217, 2447
BpuEI CTTGAG 5 cut(s) 370, 985, 1225, 1712, 2627
BsaJI CCNNGG 1 cut(s) 1282
BsaWI WCCGGW 2 cut(s) 133, 1160
Bsc4I CCNNNNNNNGG 6 cut(s) 777, 1282, 1322, 1519, 1538, 2194
Bse1I ACTGG 6 cut(s) 283, 330, 733, 1112, 1234, 1750
BseAI TCCGGA 1 cut(s) 1160
BseBI CCWGG 4 cut(s) 1283, 2225, 2580, 2676
BseDI CCNNGG 1 cut(s) 1282
BseGI GGATG 9 cut(s) 5, 66, 235, 1262, 1470, 1830, 2176, 2273, 2575
BseLI CCNNNNNNNGG 6 cut(s) 777, 1282, 1322, 1519, 1538, 2194
BseMII CTCAG 7 cut(s) 278, 565, 845, 1084, 1156, 1187, 2016
BseNI ACTGG 6 cut(s) 283, 330, 733, 1112, 1234, 1750
BseRI GAGGAG 1 cut(s) 1791
BseXI GCAGC 6 cut(s) 28, 112, 1182, 1370, 1803, 2016
BsgI GTGCAG 2 cut(s) 958, 1423
BshFI GGCC 2 cut(s) 948, 1728
BsiHKAI GWGCWC 2 cut(s) 1587, 2488
BsiSI CCGG 2 cut(s) 134, 1161
BslFI GGGAC 1 cut(s) 1246
BslI CCNNNNNNNGG 6 cut(s) 777, 1282, 1322, 1519, 1538, 2194
BsmAI GTCTC 5 cut(s) 192, 338, 584, 2349, 2410
BsmFI GGGAC 1 cut(s) 1246
BsmI GAATGC 5 cut(s) 52, 1452, 1477, 1685, 2011
BsnI GGCC 2 cut(s) 948, 1728
Bsp119I TTCGAA 2 cut(s) 1217, 2447
Bsp1286I GDGCHC 2 cut(s) 1587, 2488
Bsp13I TCCGGA 1 cut(s) 1160
Bsp1407I TGTACA 1 cut(s) 2071
Bsp143I GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
Bsp1720I GCTNAGC 3 cut(s) 1142, 2025, 2424
BspACI CCGC 3 cut(s) 1529, 2143, 2662
BspANI GGCC 2 cut(s) 948, 1728
BspCNI CTCAG 7 cut(s) 277, 564, 846, 1083, 1155, 1186, 2017
BspEI TCCGGA 1 cut(s) 1160
BspHI TCATGA 1 cut(s) 2326
BspLI GGNNCC 6 cut(s) 445, 733, 805, 1665, 2222, 2658
BspMAI CTGCAG 1 cut(s) 130
BspMI ACCTGC 1 cut(s) 2347
BspOI GCTAGC 1 cut(s) 168
BspPI GGATC 1 cut(s) 1192
BspQI GCTCTTC 1 cut(s) 642
BspT104I TTCGAA 2 cut(s) 1217, 2447
BsrGI TGTACA 1 cut(s) 2071
BsrI ACTGG 6 cut(s) 283, 330, 733, 1112, 1234, 1750
BssECI CCNNGG 1 cut(s) 1282
BssMI GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
Bst2UI CCWGG 4 cut(s) 1283, 2225, 2580, 2676
Bst4CI ACNGT 5 cut(s) 578, 628, 1633, 2483, 2707
Bst6I CTCTTC 8 cut(s) 498, 642, 1026, 1159, 1219, 1464, 1488, 1674
BstAUI TGTACA 1 cut(s) 2071
BstBI TTCGAA 2 cut(s) 1217, 2447
BstC8I GCNNGC 5 cut(s) 166, 1475, 2467, 2728, 2732
BstENI CCTNNNNNAGG 1 cut(s) 1517
BstF5I GGATG 9 cut(s) 5, 66, 235, 1262, 1470, 1830, 2176, 2273, 2575
BstHHI GCGC 1 cut(s) 1894
BstKTI GATC 6 cut(s) 421, 1187, 1339, 1498, 2565, 2587
BstMAI GTCTC 5 cut(s) 192, 338, 584, 2349, 2410
BstMBI GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
BstMWI GCNNNNNNNGC 5 cut(s) 38, 116, 125, 850, 1891
BstNI CCWGG 4 cut(s) 1283, 2225, 2580, 2676
BstNSI RCATGY 1 cut(s) 1477
BstSCI CCNGG 4 cut(s) 1281, 2223, 2578, 2674
BstSFI CTRYAG 3 cut(s) 126, 1704, 1962
BstV1I GCAGC 6 cut(s) 28, 112, 1182, 1370, 1803, 2016
BstV2I GAAGAC 3 cut(s) 189, 398, 1953
BstX2I RGATCY 1 cut(s) 2584
BstXI CCANNNNNNTGG 1 cut(s) 461
BstYI RGATCY 1 cut(s) 2584
BsuI GTATCC 1 cut(s) 2471
BsuRI GGCC 2 cut(s) 948, 1728
BtgZI GCGATG 1 cut(s) 626
BtsCI GGATG 9 cut(s) 5, 66, 235, 1262, 1470, 1830, 2176, 2273, 2575
BtsI GCAGTG 1 cut(s) 904
BtsIMutI CAGTG 8 cut(s) 276, 559, 904, 1227, 1450, 1743, 2488, 2703
BveI ACCTGC 1 cut(s) 2347
Cac8I GCNNGC 5 cut(s) 166, 1475, 2467, 2728, 2732
CciI TCATGA 1 cut(s) 2326
CfoI GCGC 1 cut(s) 1894
Cfr13I GGNCC 5 cut(s) 131, 444, 1376, 1664, 2656
Csp6I GTAC 5 cut(s) 297, 706, 2072, 2121, 2418
CviQI GTAC 5 cut(s) 297, 706, 2072, 2121, 2418
DpnI GATC 6 cut(s) 420, 1186, 1338, 1497, 2564, 2586
DpnII GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
DraIII CACNNNGTG 1 cut(s) 554
Eam1104I CTCTTC 8 cut(s) 498, 642, 1026, 1159, 1219, 1464, 1488, 1674
EarI CTCTTC 8 cut(s) 498, 642, 1026, 1159, 1219, 1464, 1488, 1674
Ecl136II GAGCTC 1 cut(s) 1585
Eco147I AGGCCT 2 cut(s) 948, 1728
Eco24I GRGCYC 1 cut(s) 1587
Eco47I GGWCC 5 cut(s) 131, 444, 1376, 1664, 2656
Eco53kI GAGCTC 1 cut(s) 1585
Eco57I CTGAAG 5 cut(s) 99, 105, 716, 743, 1683
EcoICRI GAGCTC 1 cut(s) 1585
EcoNI CCTNNNNNAGG 1 cut(s) 1517
EcoO109I RGGNCCY 1 cut(s) 1664
EcoRI GAATTC 2 cut(s) 544, 1970
EcoRII CCWGG 4 cut(s) 1281, 2223, 2578, 2674
EcoT22I ATGCAT 3 cut(s) 1479, 2311, 2325
EcoT38I GRGCYC 1 cut(s) 1587
FalI AAGNNNNNCTT 4 cut(s) 1674, 1706, 2360, 2392
FaqI GGGAC 1 cut(s) 1246
FauI CCCGC 1 cut(s) 2669
FbaI TGATCA 1 cut(s) 2562
FblI GTMKAC 1 cut(s) 1065
Fnu4HI GCNGC 6 cut(s) 42, 126, 1196, 1359, 1792, 2030
FokI GGATG 8 cut(s) 53, 242, 1249, 1477, 1817, 2163, 2280, 2562
FriOI GRGCYC 1 cut(s) 1587
Fsp4HI GCNGC 6 cut(s) 42, 126, 1196, 1359, 1792, 2030
FspBI CTAG 5 cut(s) 165, 632, 690, 776, 1250
GlaI GCGC 1 cut(s) 1893
GluI GCNGC 6 cut(s) 42, 126, 1196, 1359, 1792, 2030
GsuI CTGGAG 2 cut(s) 2472, 2601
HaeIII GGCC 2 cut(s) 948, 1728
HapII CCGG 2 cut(s) 134, 1161
HhaI GCGC 1 cut(s) 1894
Hin6I GCGC 1 cut(s) 1892
HinP1I GCGC 1 cut(s) 1892
HincII GTYRAC 4 cut(s) 942, 1066, 1260, 1332
HindII GTYRAC 4 cut(s) 942, 1066, 1260, 1332
HindIII AAGCTT 3 cut(s) 755, 961, 1132
HinfI GANTC 6 cut(s) 375, 559, 599, 1083, 1567, 1861
HpaI GTTAAC 1 cut(s) 1332
HpaII CCGG 2 cut(s) 134, 1161
HphI GGTGA 4 cut(s) 1298, 2132, 2328, 2661
HpyCH4III ACNGT 5 cut(s) 578, 628, 1633, 2483, 2707
HpyCH4IV ACGT 1 cut(s) 2649
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 116, 125, 850, 1891
HpySE526I ACGT 1 cut(s) 2649
HspAI GCGC 1 cut(s) 1892
Kpn2I TCCGGA 1 cut(s) 1160
Ksp22I TGATCA 1 cut(s) 2562
KspAI GTTAAC 1 cut(s) 1332
Kzo9I GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 4 cut(s) 809, 1920, 2220, 2491
Lsp1109I GCAGC 6 cut(s) 28, 112, 1182, 1370, 1803, 2016
LweI GCATC 5 cut(s) 14, 267, 2332, 2359, 2584
MaeI CTAG 5 cut(s) 165, 632, 690, 776, 1250
MaeII ACGT 1 cut(s) 2649
MaeIII GTNAC 4 cut(s) 1410, 2138, 2604, 2701
MalI GATC 6 cut(s) 420, 1186, 1338, 1497, 2564, 2586
MboI GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
MfeI CAATTG 3 cut(s) 223, 603, 1544
MflI RGATCY 1 cut(s) 2584
MhlI GDGCHC 2 cut(s) 1587, 2488
MmeI TCCRAC 3 cut(s) 187, 1536, 2021
Mph1103I ATGCAT 3 cut(s) 1479, 2311, 2325
MroI TCCGGA 1 cut(s) 1160
MslI CAYNNNNRTG 2 cut(s) 71, 501
MspA1I CMGCKG 3 cut(s) 125, 1195, 1703
MspI CCGG 2 cut(s) 134, 1161
MspR9I CCNGG 4 cut(s) 1283, 2225, 2580, 2676
MunI CAATTG 3 cut(s) 223, 603, 1544
Mva1269I GAATGC 5 cut(s) 52, 1452, 1477, 1685, 2011
MvaI CCWGG 4 cut(s) 1283, 2225, 2580, 2676
MwoI GCNNNNNNNGC 5 cut(s) 38, 116, 125, 850, 1891
NdeII GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
NheI GCTAGC 1 cut(s) 164
NlaIV GGNNCC 6 cut(s) 445, 733, 805, 1665, 2222, 2658
NmuCI GTSAC 3 cut(s) 2138, 2604, 2701
NsiI ATGCAT 3 cut(s) 1479, 2311, 2325
NspI RCATGY 1 cut(s) 1477
NspV TTCGAA 2 cut(s) 1217, 2447
PaeI GCATGC 1 cut(s) 1477
PagI TCATGA 1 cut(s) 2326
PaqCI CACCTGC 1 cut(s) 2347
PceI AGGCCT 2 cut(s) 948, 1728
PciSI GCTCTTC 1 cut(s) 642
PctI GAATGC 5 cut(s) 52, 1452, 1477, 1685, 2011
PfeI GAWTC 6 cut(s) 375, 559, 599, 1083, 1567, 1861
PflMI CCANNNNNTGG 2 cut(s) 1322, 1538
PfoI TCCNGGA 2 cut(s) 2578, 2674
PkrI GCNGC 6 cut(s) 43, 127, 1197, 1360, 1793, 2031
PpuMI RGGWCCY 1 cut(s) 1664
PsiI TTATAA 2 cut(s) 1077, 2019
Psp124BI GAGCTC 1 cut(s) 1587
Psp5II RGGWCCY 1 cut(s) 1664
Psp6I CCWGG 4 cut(s) 1281, 2223, 2578, 2674
PspGI CCWGG 4 cut(s) 1281, 2223, 2578, 2674
PspN4I GGNNCC 6 cut(s) 445, 733, 805, 1665, 2222, 2658
PspPI GGNCC 5 cut(s) 131, 444, 1376, 1664, 2656
PspPPI RGGWCCY 1 cut(s) 1664
PstI CTGCAG 1 cut(s) 130
PsuI RGATCY 1 cut(s) 2584
PvuII CAGCTG 3 cut(s) 125, 1195, 1703
RsaI GTAC 5 cut(s) 298, 707, 2073, 2122, 2419
RsaNI GTAC 5 cut(s) 297, 706, 2072, 2121, 2418
RseI CAYNNNNRTG 2 cut(s) 71, 501
SacI GAGCTC 1 cut(s) 1587
SalI GTCGAC 1 cut(s) 1064
SapI GCTCTTC 1 cut(s) 642
SatI GCNGC 6 cut(s) 42, 126, 1196, 1359, 1792, 2030
Sau3AI GATC 6 cut(s) 418, 1184, 1336, 1495, 2562, 2584
Sau96I GGNCC 5 cut(s) 131, 444, 1376, 1664, 2656
ScrFI CCNGG 4 cut(s) 1283, 2225, 2580, 2676
SduI GDGCHC 2 cut(s) 1587, 2488
SfaNI GCATC 5 cut(s) 14, 267, 2332, 2359, 2584
SfcI CTRYAG 3 cut(s) 126, 1704, 1962
SfuI TTCGAA 2 cut(s) 1217, 2447
SinI GGWCC 5 cut(s) 131, 444, 1376, 1664, 2656
SmiMI CAYNNNNRTG 2 cut(s) 71, 501
SmlI CTYRAG 5 cut(s) 349, 964, 1240, 1691, 2642
SmoI CTYRAG 5 cut(s) 349, 964, 1240, 1691, 2642
SphI GCATGC 1 cut(s) 1477
SseBI AGGCCT 2 cut(s) 948, 1728
SsiI CCGC 3 cut(s) 1529, 2143, 2662
SspI AATATT 4 cut(s) 250, 880, 1985, 2346
SspMI CTAG 5 cut(s) 165, 632, 690, 776, 1250
SstI GAGCTC 1 cut(s) 1587
StuI AGGCCT 2 cut(s) 948, 1728
StyD4I CCNGG 4 cut(s) 1281, 2223, 2578, 2674
TaaI ACNGT 5 cut(s) 578, 628, 1633, 2483, 2707
TaiI ACGT 1 cut(s) 2652
TaqI TCGA 6 cut(s) 1065, 1217, 2353, 2363, 2447, 2752
TatI WGTACW 1 cut(s) 2071
TfiI GAWTC 6 cut(s) 375, 559, 599, 1083, 1567, 1861
TscAI CASTG 8 cut(s) 283, 559, 904, 1234, 1450, 1750, 2488, 2710
TseFI GTSAC 3 cut(s) 2138, 2604, 2701
TseI GCWGC 6 cut(s) 41, 125, 1195, 1358, 1791, 2029
Tsp45I GTSAC 3 cut(s) 2138, 2604, 2701
TspRI CASTG 8 cut(s) 283, 559, 904, 1234, 1450, 1750, 2488, 2710
Van91I CCANNNNNTGG 2 cut(s) 1322, 1538
VpaK11BI GGWCC 5 cut(s) 131, 444, 1376, 1664, 2656
XagI CCTNNNNNAGG 1 cut(s) 1517
XceI RCATGY 1 cut(s) 1477
XmiI GTMKAC 1 cut(s) 1065
XspI CTAG 5 cut(s) 165, 632, 690, 776, 1250
Zsp2I ATGCAT 3 cut(s) 1479, 2311, 2325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.