Rorug05G0068600

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
5873222 .. 5874799
1578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0068600.1

Sequence Viewer

Length: 1578 bp
ATGGCATGGCGGTCATGCTGTACTCCAGTTGATGAGGGTGGTTTAGGGCTTAAGCAACTTGTGCTCTTGAATCGTTCCTTATTATTAAAGCGCTGCTGGGAGGTTTTTTCTTCTCAATCTGAAGGTTGTTCATTCATTCGGAACCAGTTTATTCAGCGTCGTTCTTATGCTTCTTCTTCTATCTGGCCTGGGATTCGGCAATTTTGGGTTGTTGTTCAAGATAATGCTCGATGGTTAATTGGTTCAGCGGATAAGATTTCTTTTTGGAGGGATAATTTCTTGGGCAGACCCATTAGTGATTTCTTCGATGTCCGTGTTGCATTACAGGACGATCTTCCAGACATGGTTTCGAGTTTTATTAGTAATGGTTCATGGGATTTGCCTCAGCTTCTACACTTCTATTTTCCATCCTTGTGTGATTGGATTAGTCAAGTTCCAATTGCCGCAGATCCTTCAGCAGAAGACAAATTTATTTGGACTGCTTCCTCTTCTGGTGAGTTAACTGCAAAGCATGCTTACATTTTTTTGCGGCAGCCTTCTCCTTCAGTAGCATGGGGCAAATCATTATGGTCTAAATTTATCTTGCCTCGAATGTCTCTGCTAGCTTGGAAGGTTTTAAGAGGTAGAGTGATTTCTGATGATTTTTTACAACGAAGGGGAGTAGCTTTGGTCTCTCGTTGTGATCTTTGTGGTATCGATTCTGAATCTCTTGATCACATTTTTCTTAATTGCTCTTTTACGGCTGCAATATGGAGTCATTTTACTTCTCTCTTTGAGTTGGGTGGAGTTCCTCCCTCAATTTTGGAGGGTTTACAAGTGGGTATGGCTGTAGGACGAAGTGGACAGCTCAAAGACTTATGGTTGATTTGTTTCACTTCAATATTGTGGTTTGTATGGAATGCTAGAAACAAAATGAGACATGAGGGGAAGGTGTTTTCAGTTGGTACTATTTGTAGGCTTGTCTCTTGTCATATTCAAGCAGCTAGTCGTTTGGCAGCAGGTACCATGCACAATTCCATCCAAGATCTACGCATTTTGAAAGCCTTTGGGGCCCATTGCAGATTGCGTCGTGCCCCTAGAGTGATAGAGGTGATTTGGCATCCCCCATTGATTGGTTGGGTTAAGATTAATTCTGATGGAGCTTGGAAACATGATGAGGGGGTTGGAGGTTATGGGGCTGTGTTTAGGGATCATATGGGACGTTTGCTTGGAGCTTTTGCTTCTAATCTTGAGATTCCTAGTTCCATTGCGGCAGAGGTGATGGCTGTGATTAAGGCAATTGAGCTGGCATGGATTCGTGATTGGAAGCACATATGGCTAGAAGTGGACTCTTCTCTTATTCTGGATTTTATTAAATCTCCTTTGTTGGTCCCGTGGCAACTTCGTATTAGCTGGCTCAATTGCTTGTACAAGATTTCTCAAATGACTTTTCGTGTATCACATATTTTTCGTGAAGGTAATAAGGTAGCTGATGCTTTGGCGAATTATGGTACGACTGCTCCTAATATGGTGTGGTGGGATGCTACACCATCTTTTCTTTTATCGCATTGTCAGAGTGACCAATTGGGTTTTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

525

Amino Acids

59.42

Weight (kDa)

8.81

Isoelectric Point (pI)

54.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 168 - 251 2.4e-20 zinc-binding in reverse transcriptase
RVT_3 PF13456 377 - 496 3.4e-21 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 989
Acc65I GGTACC 1 cut(s) 1001
AccB1I GGYRCC 1 cut(s) 1001
AccB7I CCANNNNNTGG 1 cut(s) 1112
AciI CCGC 5 cut(s) 10, 248, 444, 529, 1250
AclWI GGATC 2 cut(s) 443, 1197
AcsI RAATTY 2 cut(s) 467, 575
AcuI CTGAAG 3 cut(s) 141, 438, 528
AfaI GTAC 5 cut(s) 22, 946, 1003, 1409, 1492
AfeI AGCGCT 1 cut(s) 92
AfiI CCNNNNNNNGG 1 cut(s) 1112
AflII CTTAAG 1 cut(s) 50
AgsI TTSAA 5 cut(s) 70, 218, 879, 977, 1039
AjnI CCWGG 1 cut(s) 187
AjuI GAANNNNNNNTTGG 1 cut(s) 1554
Alw21I GWGCWC 1 cut(s) 66
Alw26I GTCTC 4 cut(s) 600, 676, 910, 967
AlwI GGATC 2 cut(s) 443, 1197
Aor51HI AGCGCT 1 cut(s) 92
AoxI GGCC 2 cut(s) 185, 1050
ApaI GGGCCC 1 cut(s) 1054
ApeKI GCWGC 5 cut(s) 93, 532, 743, 980, 995
ApoI RAATTY 2 cut(s) 467, 575
AseI ATTAAT 1 cut(s) 1128
Asp718I GGTACC 1 cut(s) 1001
AspLEI GCGC 1 cut(s) 93
AspS9I GGNCC 3 cut(s) 1050, 1051, 1369
AsuHPI GGTGA 3 cut(s) 506, 1102, 1270
AsuNHI GCTAGC 1 cut(s) 601
AvaII GGWCC 1 cut(s) 1369
BaeGI GKGCMC 2 cut(s) 1054, 1075
BanI GGYRCC 1 cut(s) 1001
BanII GRGCYC 1 cut(s) 1054
BbsI GAAGAC 1 cut(s) 468
Bbv12I GWGCWC 1 cut(s) 66
BbvCI CCTCAGC 1 cut(s) 384
BbvI GCAGC 5 cut(s) 80, 544, 730, 992, 1007
BccI CCATC 6 cut(s) 225, 415, 1025, 1130, 1255, 1537
BceAI ACGGC 1 cut(s) 756
BciT130I CCWGG 1 cut(s) 189
BclI TGATCA 1 cut(s) 712
BcoDI GTCTC 4 cut(s) 600, 676, 910, 967
BfaI CTAG 6 cut(s) 602, 903, 984, 1077, 1239, 1319
BfmI CTRYAG 1 cut(s) 828
BfoI RGCGCY 1 cut(s) 94
BfrI CTTAAG 1 cut(s) 50
BfuAI ACCTGC 1 cut(s) 989
BglI GCCNNNNNGGC 1 cut(s) 1049
BglII AGATCT 1 cut(s) 1024
BisI GCNGC 8 cut(s) 94, 444, 530, 533, 744, 981, 996, 1251
BlsI GCNGC 8 cut(s) 95, 445, 531, 534, 745, 982, 997, 1252
Bme1390I CCNGG 1 cut(s) 189
Bme18I GGWCC 1 cut(s) 1369
BmgT120I GGNCC 3 cut(s) 1050, 1051, 1369
BmiI GGNNCC 5 cut(s) 143, 1003, 1051, 1052, 1371
BmrFI CCNGG 1 cut(s) 189
BmsI GCATC 3 cut(s) 1108, 1462, 1510
BmtI GCTAGC 1 cut(s) 605
BpiI GAAGAC 1 cut(s) 468
BpmI CTGGAG 1 cut(s) 9
Bpu10I CCTNAGC 1 cut(s) 384
BpuEI CTTGAG 1 cut(s) 1250
Bsa29I ATCGAT 1 cut(s) 696
BsaI GGTCTC 1 cut(s) 676
BsaJI CCNNGG 2 cut(s) 188, 1373
BsaXI ACNNNNNCTCC 2 cut(s) 1483, 1513
Bsc4I CCNNNNNNNGG 1 cut(s) 1112
Bse1I ACTGG 2 cut(s) 26, 145
Bse3DI GCAATG 2 cut(s) 1054, 1245
BseBI CCWGG 1 cut(s) 189
BseCI ATCGAT 1 cut(s) 696
BseDI CCNNGG 2 cut(s) 188, 1373
BseGI GGATG 4 cut(s) 407, 1017, 1099, 1525
BseLI CCNNNNNNNGG 1 cut(s) 1112
BseMI GCAATG 2 cut(s) 1054, 1245
BseMII CTCAG 1 cut(s) 398
BseNI ACTGG 2 cut(s) 26, 145
BseSI GKGCMC 2 cut(s) 1054, 1075
BseXI GCAGC 5 cut(s) 80, 544, 730, 992, 1007
BseYI CCCAGC 1 cut(s) 96
BshFI GGCC 2 cut(s) 187, 1052
BshNI GGYRCC 1 cut(s) 1001
BshVI ATCGAT 1 cut(s) 696
BsiHKAI GWGCWC 1 cut(s) 66
BslFI GGGAC 2 cut(s) 1212, 1355
BslI CCNNNNNNNGG 1 cut(s) 1112
BsmAI GTCTC 4 cut(s) 600, 676, 910, 967
BsmFI GGGAC 2 cut(s) 1212, 1355
BsmI GAATGC 1 cut(s) 904
BsnI GGCC 2 cut(s) 187, 1052
Bso31I GGTCTC 1 cut(s) 676
Bsp120I GGGCCC 1 cut(s) 1050
Bsp1286I GDGCHC 3 cut(s) 66, 1054, 1075
Bsp1407I TGTACA 1 cut(s) 1407
Bsp143I GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
BspACI CCGC 5 cut(s) 10, 248, 444, 529, 1250
BspANI GGCC 2 cut(s) 187, 1052
BspCNI CTCAG 1 cut(s) 397
BspDI ATCGAT 1 cut(s) 696
BspLI GGNNCC 5 cut(s) 143, 1003, 1051, 1052, 1371
BspMI ACCTGC 1 cut(s) 989
BspOI GCTAGC 1 cut(s) 605
BspPI GGATC 2 cut(s) 443, 1197
BspT107I GGYRCC 1 cut(s) 1001
BspTI CTTAAG 1 cut(s) 50
BspTNI GGTCTC 1 cut(s) 676
BsrDI GCAATG 2 cut(s) 1054, 1245
BsrGI TGTACA 1 cut(s) 1407
BsrI ACTGG 2 cut(s) 26, 145
BssECI CCNNGG 2 cut(s) 188, 1373
BssMI GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
Bst2UI CCWGG 1 cut(s) 189
Bst6I CTCTTC 2 cut(s) 493, 1336
BstAFI CTTAAG 1 cut(s) 50
BstAPI GCANNNNNTGC 2 cut(s) 61, 512
BstAUI TGTACA 1 cut(s) 1407
BstC8I GCNNGC 4 cut(s) 513, 603, 1287, 1394
BstDEI CTNAG 1 cut(s) 384
BstDSI CCRYGG 1 cut(s) 1373
BstF5I GGATG 4 cut(s) 407, 1017, 1099, 1525
BstH2I RGCGCY 1 cut(s) 94
BstHHI GCGC 1 cut(s) 93
BstKTI GATC 6 cut(s) 334, 451, 685, 715, 1027, 1192
BstMAI GTCTC 4 cut(s) 600, 676, 910, 967
BstMBI GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
BstMWI GCNNNNNNNGC 4 cut(s) 61, 512, 1049, 1315
BstNI CCWGG 1 cut(s) 189
BstNSI RCATGY 1 cut(s) 515
BstSCI CCNGG 1 cut(s) 187
BstSFI CTRYAG 1 cut(s) 828
BstSLI GKGCMC 2 cut(s) 1054, 1075
BstV1I GCAGC 5 cut(s) 80, 544, 730, 992, 1007
BstV2I GAAGAC 1 cut(s) 468
BstX2I RGATCY 2 cut(s) 448, 1024
BstYI RGATCY 2 cut(s) 448, 1024
Bsu15I ATCGAT 1 cut(s) 696
BsuRI GGCC 2 cut(s) 187, 1052
BsuTUI ATCGAT 1 cut(s) 696
BtgI CCRYGG 1 cut(s) 1373
BtsCI GGATG 4 cut(s) 407, 1017, 1099, 1525
BveI ACCTGC 1 cut(s) 989
Cac8I GCNNGC 4 cut(s) 513, 603, 1287, 1394
CfoI GCGC 1 cut(s) 93
Cfr13I GGNCC 3 cut(s) 1050, 1051, 1369
ClaI ATCGAT 1 cut(s) 696
CseI GACGC 2 cut(s) 146, 1055
Csp6I GTAC 5 cut(s) 21, 945, 1002, 1408, 1491
CviQI GTAC 5 cut(s) 21, 945, 1002, 1408, 1491
DdeI CTNAG 1 cut(s) 384
DpnI GATC 6 cut(s) 333, 450, 684, 714, 1026, 1191
DpnII GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
Eam1104I CTCTTC 2 cut(s) 493, 1336
EarI CTCTTC 2 cut(s) 493, 1336
Eco24I GRGCYC 1 cut(s) 1054
Eco31I GGTCTC 1 cut(s) 676
Eco47I GGWCC 1 cut(s) 1369
Eco47III AGCGCT 1 cut(s) 92
Eco57I CTGAAG 3 cut(s) 141, 438, 528
EcoO109I RGGNCCY 1 cut(s) 1050
EcoRII CCWGG 1 cut(s) 187
EcoT38I GRGCYC 1 cut(s) 1054
FaqI GGGAC 2 cut(s) 1212, 1355
FauNDI CATATG 2 cut(s) 1194, 1313
FbaI TGATCA 1 cut(s) 712
Fnu4HI GCNGC 8 cut(s) 94, 444, 530, 533, 744, 981, 996, 1251
FokI GGATG 4 cut(s) 394, 1004, 1086, 1532
FriOI GRGCYC 1 cut(s) 1054
Fsp4HI GCNGC 8 cut(s) 94, 444, 530, 533, 744, 981, 996, 1251
FspBI CTAG 6 cut(s) 602, 903, 984, 1077, 1239, 1319
GlaI GCGC 1 cut(s) 92
GluI GCNGC 8 cut(s) 94, 444, 530, 533, 744, 981, 996, 1251
GsaI CCCAGC 1 cut(s) 100
GsuI CTGGAG 1 cut(s) 9
HaeII RGCGCY 1 cut(s) 94
HaeIII GGCC 2 cut(s) 187, 1052
HgaI GACGC 2 cut(s) 146, 1055
HhaI GCGC 1 cut(s) 93
Hin6I GCGC 1 cut(s) 91
HinP1I GCGC 1 cut(s) 91
HincII GTYRAC 1 cut(s) 501
HindII GTYRAC 1 cut(s) 501
HinfI GANTC 8 cut(s) 70, 193, 698, 704, 754, 1234, 1294, 1328
HpaI GTTAAC 1 cut(s) 501
HphI GGTGA 3 cut(s) 506, 1102, 1270
Hpy166II GTNNAC 4 cut(s) 501, 812, 842, 1327
Hpy188I TCNGA 6 cut(s) 121, 141, 637, 703, 1135, 1554
Hpy188III TCNNGA 8 cut(s) 67, 218, 338, 710, 1229, 1298, 1343, 1451
Hpy8I GTNNAC 4 cut(s) 501, 812, 842, 1327
Hpy99I CGWCG 2 cut(s) 162, 1071
HpyAV CCTTC 8 cut(s) 116, 462, 546, 552, 604, 648, 922, 1448
HpyCH4IV ACGT 1 cut(s) 1201
HpyCH4V TGCA 5 cut(s) 320, 506, 746, 1009, 1059
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 512, 1049, 1315
HpyF3I CTNAG 1 cut(s) 384
HpySE526I ACGT 1 cut(s) 1201
HspAI GCGC 1 cut(s) 91
KpnI GGTACC 1 cut(s) 1005
Ksp22I TGATCA 1 cut(s) 712
KspAI GTTAAC 1 cut(s) 501
Kzo9I GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
LmnI GCTCC 3 cut(s) 1139, 1211, 1504
Lsp1109I GCAGC 5 cut(s) 80, 544, 730, 992, 1007
LweI GCATC 3 cut(s) 1108, 1462, 1510
MaeI CTAG 6 cut(s) 602, 903, 984, 1077, 1239, 1319
MaeII ACGT 1 cut(s) 1201
MaeIII GTNAC 1 cut(s) 1556
MalI GATC 6 cut(s) 333, 450, 684, 714, 1026, 1191
MboI GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
MboII GAAGA 8 cut(s) 102, 165, 168, 295, 326, 473, 480, 1323
MfeI CAATTG 4 cut(s) 438, 1278, 1399, 1562
MflI RGATCY 2 cut(s) 448, 1024
MhlI GDGCHC 3 cut(s) 66, 1054, 1075
MlyI GAGTC 2 cut(s) 763, 1322
MmeI TCCRAC 1 cut(s) 1144
MslI CAYNNNNRTG 1 cut(s) 412
MspA1I CMGCKG 1 cut(s) 248
MspCI CTTAAG 1 cut(s) 50
MspR9I CCNGG 1 cut(s) 189
MunI CAATTG 4 cut(s) 438, 1278, 1399, 1562
Mva1269I GAATGC 1 cut(s) 904
MvaI CCWGG 1 cut(s) 189
MwoI GCNNNNNNNGC 4 cut(s) 61, 512, 1049, 1315
NdeI CATATG 2 cut(s) 1194, 1313
NdeII GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
NheI GCTAGC 1 cut(s) 601
NlaIV GGNNCC 5 cut(s) 143, 1003, 1051, 1052, 1371
NmuCI GTSAC 1 cut(s) 1556
NspI RCATGY 1 cut(s) 515
PaeI GCATGC 1 cut(s) 515
PctI GAATGC 1 cut(s) 904
PfeI GAWTC 6 cut(s) 70, 193, 698, 704, 1234, 1294
PflMI CCANNNNNTGG 1 cut(s) 1112
PkrI GCNGC 8 cut(s) 95, 445, 531, 534, 745, 982, 997, 1252
PleI GAGTC 2 cut(s) 762, 1322
PpsI GAGTC 2 cut(s) 762, 1322
PshBI ATTAAT 1 cut(s) 1128
Psp6I CCWGG 1 cut(s) 187
PspFI CCCAGC 1 cut(s) 96
PspGI CCWGG 1 cut(s) 187
PspN4I GGNNCC 5 cut(s) 143, 1003, 1051, 1052, 1371
PspOMI GGGCCC 1 cut(s) 1050
PspPI GGNCC 3 cut(s) 1050, 1051, 1369
PsuI RGATCY 2 cut(s) 448, 1024
RsaI GTAC 5 cut(s) 22, 946, 1003, 1409, 1492
RsaNI GTAC 5 cut(s) 21, 945, 1002, 1408, 1491
RseI CAYNNNNRTG 1 cut(s) 412
SatI GCNGC 8 cut(s) 94, 444, 530, 533, 744, 981, 996, 1251
Sau3AI GATC 6 cut(s) 331, 448, 682, 712, 1024, 1189
Sau96I GGNCC 3 cut(s) 1050, 1051, 1369
SchI GAGTC 2 cut(s) 763, 1322
ScrFI CCNGG 1 cut(s) 189
SduI GDGCHC 3 cut(s) 66, 1054, 1075
SfaNI GCATC 3 cut(s) 1108, 1462, 1510
SfcI CTRYAG 1 cut(s) 828
SinI GGWCC 1 cut(s) 1369
SmiMI CAYNNNNRTG 1 cut(s) 412
SmlI CTYRAG 2 cut(s) 50, 1229
SmoI CTYRAG 2 cut(s) 50, 1229
SphI GCATGC 1 cut(s) 515
SsiI CCGC 5 cut(s) 10, 248, 444, 529, 1250
SspI AATATT 1 cut(s) 882
SspMI CTAG 6 cut(s) 602, 903, 984, 1077, 1239, 1319
StyD4I CCNGG 1 cut(s) 187
TaiI ACGT 1 cut(s) 1204
TaqI TCGA 5 cut(s) 229, 306, 350, 589, 696
TatI WGTACW 2 cut(s) 20, 1407
TauI GCSGC 3 cut(s) 446, 532, 1253
TfiI GAWTC 6 cut(s) 70, 193, 698, 704, 1234, 1294
TseFI GTSAC 1 cut(s) 1556
TseI GCWGC 5 cut(s) 93, 532, 743, 980, 995
Tsp45I GTSAC 1 cut(s) 1556
TspDTI ATGAA 3 cut(s) 120, 124, 360
TspGWI ACGGA 1 cut(s) 302
Van91I CCANNNNNTGG 1 cut(s) 1112
Vha464I CTTAAG 1 cut(s) 50
VpaK11BI GGWCC 1 cut(s) 1369
VspI ATTAAT 1 cut(s) 1128
XapI RAATTY 2 cut(s) 467, 575
XceI RCATGY 1 cut(s) 515
XcmI CCANNNNNNNNNTGG 1 cut(s) 1113
XspI CTAG 6 cut(s) 602, 903, 984, 1077, 1239, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.