RLG00000000736

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
4582731 .. 4600763
18033 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000736

Sequence Viewer

Length: 8442 bp
ATGGAGATAGGAAACCTAAAATCATTGGTGGCTCTATGGTTGGGCACAAATCGCCTCAGTGGTTCAATTCCGACAACACTGGGGGATCTGAAGAACCTTACCACTCTCTATCTCCATACAAATAATCTTTCTGGCCCTATTCCCATGGAGATAGGAAACCTGAAATCATTGGTGGGTCTAGACTTGAGCGCCAATCAACTCAGTGGTTCAATTCCGACAACACTGGGGGATCTGACAAACCTTACTATTCTTTCCCTCTTTACAAATAATCTTTCTGGCACTATTCCCATGGAGATAGGAAACCTGAAATCATTGGTGAATCTAAGATTGAGCGCCAATCAACTCAATGGTTCAATTCCGACAACATTAGGTGGTCTGACCAACCTTACCACTCTCTATCTCTATAGAAATCATCTTTCTGGCACTATTCTCATGGAGATAGGAAACCTGAAATCATTGGTGGGTCTAGACTTGAGCGCCAATCAACTCAGTGGTTCAATTCCGACAACACTGGGGGATCTGACAAACCTTACTATTCTTTCCCTCTTTACAAATAATCTTTCTGGCACTATTCCCATGGAGATAGGAAACCTAAAATCATTGGTGGCTCTACGGTTGAGCACAAATCGCCTCAGTGGTTCAATTCCGACAACACTGGGGGATCTGAAGAACCTTACCACTCTCTATCTCCATACAAATAATCTTTCTGGCACTATTCCCATGGAAATAGGAAACCTGAAATCATTGGTGGGTCTAGACTTGAGCGCCAATCAACTCAGTGGTTCAATTCCGACAACACTGGGGGATCTGACAAACCTTACTATTCTTTCCCTCTTTACAAATAATCTTTCTGGCACTATTCCCATGGAGATAGGAAACCTGAAATCATTGGTGAATCTAAGCTTGAGCAACAATCACCTCAGTGGTTTAGTTCCGACAACACTAGGGGATCTTACGAACCTTACCACTCTCTATCTCCATATAAATAATCTTTCTGGCACTATTCCCATGGAGATAGGAAATATCCCGAAGTTGATAGTATTGGAATTGGGTGTAAACCAATTTTCAGGTTATTTGCCACATAACATTTGCCGAGCTGGATCACTCACACGCTTCACAGCTTTCTCCAATCATCTAAGTGGTCCAATCCCTAAATTCTTGAAAACCTGCACAAGCTTATTCAGTGTCCGTCTTGAAGGAAACCAATTGACAGGCAATATATCTGAAGTCTTTGGTGTTTATCCAAGTCTCAATTTCATAGATTTGAGCAACAACAAACTTTATGGTGAAATCTCACCAAATTGGGGATTGTGCCCAAATTTAACAACTCTGCGAATAGCGGGAAACAAACTTACTGGTTCTATTCCAGCTAAGATTGGAAGCGCAACCCAAATTCATGAGCTGGATCTTTCTTCAAATGGTTTAATCGGTACAATTCCGAAGGAGTTTGGGGGATTAACTTCCATGTTGAAGCTGCTGTTGGATGGCAATCAACTTTCAGGTCGTGTCCCATCAGAGTTGAAATCATTGACTGATCTAGAATACCTTGGTCTGTCAGCAAACGAATTCAATGATTCAATTCCAAGCTTTATAGGTGACTTTCAAAAGTTACATTACTTGAATTTGAGCAACAACAAGTTCAGTCAAACAATTCCATTTCAGTTGGGGAAGTTAATTCATCTGTCCCAACTAGATTTGAGTTTTAACGCAGTTGAAGGTCAGATACCATCATATATTAGCAATATGCAGAGTCTGGAGATACTTAATATATCCCACAACAATCTTTCTGGCTTCATTCCAACAAGTTTTGAAGACATGCATGGGTTATCGTATGTAGACATATCCTACAATGACTTGGATGGTCCACTTCCCAACAACAAAGCATTTCAGGCTGCTACTCAAGAAGCATTGCAAGGGAACAAGGGCTTGTGTGGCAACGCACGATTTTTGCAACCCTGCAATAAACAAAGCCCAAAACAGGACCATAAACTCGTATTTATGATAATCTTCCCTATTCTTGGAGCAGTTGCACTTCTAGCCTTTATATTTGCATTGGTAGCAAAAAGGAAAAAGAAGCATCGACATGGAGAAAAAACCAACATGAATGAAGGAATTTCTTTTTCAATATTAAAGTTTGATGGAAAGACGATGTTTGAGGAAATCATGAGGGCAACAGAAGATTTTGATTCCATGTATTGCATAGGGCAGGGAGAACAGGGAAGTGTCTACAAAGCAACTTTGTCATCCAGTTACACAGTGGCTGTGAAGAAACTCCATTTGCCGTGCGACGATGACAAGAATCTTCAGAAGGCATTCTTGAATGAAATTAGGGCACTAACTGAGATGCGCCACCGAAATATTGTGAAGTTTTATGGTTTCTGTTCACATAGGCTACACTCATTTTTGGTGTATGATTATCTGGAAAAAGGTAGTTTAACCACGATGTTGAGCAAAGATGAGGAAGCCAAAGAACTGGGGTGGACTAAAAGGGCGAATATAGTTAAAGGTGTAGCTCATGCCTTGTGTTACATGCATCACGATTGTTTGCCACCGATTGTGCATCGAGACATATCAAGCAAAAATATTTTGCTAGATGATGAATATGAGGCCTGTGTTTCAGACTTTGGCACTGCTAAGTTCTTAAACCCAGAGTCAGCTAATTGGACTGCCCTTACAGGCACATATGGATATATTGCACCGGAGCTGGCTTATACTATGGAAGTGAATGAAAAGTGCGATGTTTATAGCTTTGGAGTGGTGACATTGGAGACAGTTATGGGAAGACATCCTGGAGATCTTCTCTCATCTCTATCTTCGGGGGCGTGTTCATCATCGTCAACTGCATTACCAGCCCATCAAATGCCAGTTGTGGATGTTTTGGACCAACGCATTTCCCCTCCTACACGTGAAGTTGCAGGAGAAGTTGTCTCTGTTTTGAAGAATGATGACCTGGAAAGCATAGCAATGCTCAAGCTCCTCCTCCACAACTTCCACCGTCTGAGCCTCCCCAATTCCCCCAAATTCCGATGCGTCTTGCATCAGATTGCCCCCAACTTGGCCATCTCCTTCTCCCTCAGTTCCGTCTTCACCTCTGCCAACCTCATTGCCGCCGACGCCGCCTCCGGTTCCGGCTTTCTCCACGGCACCGTCACCTCCACCATCACTCAAGTCGCTGTCACCGCCGTCACCATCGCTTCCACTAAAGTTGATTTCTTGTGGCCCAAACTCGAAAGACAGCCAGTTTGGGCTGGCTGTGACCCGAAGGCTGTTGGGGGCCTCAAAGGGCACTTAGATTATTGCTTTTCTTCAGATTGGTGCCCGGATGGACGAATCTTGGCTACTGGGAACCAAGACACTACCTGTAGGCTATGGGGCATAAGGAACCTGTCAGAGTCCCTAGCCGTGTTGAAGGGAAGAATGGGAACAATAAGAGCTTTAAAATTCACCTCTGATGGTCGTTTTATGGCCATGGCTGAGCCAGCAGACTTTGTTCACATCATTGATACCCAGTCCGGATATGCAAAGGGACAAGAGATTGATCTGTTTGGTGAGATTGCCGGAATATCCTTCAGCCCCTGTGAAGCTTTGTTTGTTGGGGTTGCTGATCGCACATGTGGTAGTGTTTTGGAGTTCAATAAGAGGCACTATAATCCGTATCAAGACAGTCTTCTAGTTCAAGTCCGTCAGTCATGGGAAGATGAAGGTCTGATTGTGCATCGGGACATATCGAGCAAGAACATTTTGCTGGATGATGAATCTGAGGCCTCTGTTTCAGACTTTGACACTGCTAAGTTTTTAAACCCAGACTCAGCTAATTGGACTGCCCTTGCAGGCACATATGGATACGTTGCACTTTGGAGTGGTGACATTGGAGACAGTTATGGGAAGACATCCGGGAGATCTTCGGGGGCGTGTTCATCATCATCATCATCGTCATCCTCAACTGCATTGCCAGCTCATCAAATGCCAGTTGTGGATGTTTTGGACCAACGCATTTCCCCTCCCACACGTGAAGTTGCAGGAGAAGTTGTCTCTGTTGTGAAGGTAGCATTTGCATGCCTGAATTCCAGTCCTCAATCTCGTCCAACAGTGAAGCAAATTCCTTTCATCCCTCCAAAAGAAAGTACTTGTCTCCCCCAATTCCAGGTTTCAACGGCGTATTTCCAGAACGATGACCTGGAAAGCACAGCAATGCCCTCATGCCAAACCTCAAGCTCCTCCTCTCACCACGGCGCCGTCACTCAAGTCAATGTCACCGCCGTCACCATCGCCTCCACTAAAGCGGATTTCTTGTGGCCCATACTCGAAACACAGCCAGTGCAAAAATCCATTGCATTTGCCAAGAAGGCTCACCATGGCCAACTACGCAAAACCGGAGACCCTTATTTAGTCCATTGCATCCATACAGGAAGAATCTTGGCCCTGTTGGTTCCTTCAAGTGCCAGTTCAACTACTGAAGCGCAAGCCCTTCTGAAATGGAAAGCCAGCTTACAAAATCAAACCCGGCCTATCAACTCATGGATGTACCTTCCCCGTACAAATAATGCCACCAATACTTCCAGCAATCCCAAAGCAATTGCAAACCCATGCATTTGGACTGGTATCTCATGCAATGCTGCTGGAAGTGTCAATAGGATAAACCTTACCAATTTTGGTATGCAAGGTACGCTACATGAATTCTCATTCTTGTCATTCCCTAATCTTGTGTATCTAAACCTCAGCTGGAATAAACTCTTTGAAGTCATACCACTTGGAATTAGTTCCCTCTCCAAACTCATTTATCTTGATCTATCTGTAAATCACTTTTCTGGAAAAATCCCGCCAGAAATTGGTCTTCTAAGAAGCCTCACATTTCTCTATCTTTATGCAAATAATATTTCCGGCACTATTCCTATGGAGATAGGAAACCTGAAATCATTGGTGGTTCTATCGCTGAGCTACAATCAACTCAGTGGTTCAATTCCGCCAACATTGGGTGATCTGACCAACCTTACCACTCTCTATCTCGGTTCTAATAATATTACTGGCACTATTCCTATGGAGATAGGAAACCTGAAATCATTGGTGGATCTACAGTTGGGCAACAATCAACTCAGTGGTTCAATTCTGACAACACTGGGGGATCTGACTAATCTTACCATTCTCTATCTTTATGAAAATAATCTTTCTGGCACTATTCCTATGGAGATAGGAAATCTGAAATCATTGGTGAATCTATGCTTGAGCACCAATCACCTCAGTGGTTCAATTCCGACAACACTGGGGGCTCTGACCAATCTTACCATTCTCTTCCTCTATTCAAATAATCTTTATGGCGCTATTCCCATGGAGATAGGAAACCTGAAATCATTGGTGAATCTAGACTTGAGCGCCAATCAACTCAGTGGTCCAATTCCGACAACAGTGGGGGATCTGACCAACCTTACCATTCTCACCCTCTTTTCAAATAATCTTTCTGGAACTATTCCCATGGAGATAGGAAACCTGAAATCACTAGTGAATCTAACTATGAACAAGAATCAACTTAGTGGTTCAATTCCAACAACAGTGGGGGATCTGACCAACCTTACCACTCTCTTCCTCTTTTCAAATAATCTTTCCGGCACTATTCCCATGAAGATAGGAAACCTGAAATCATTGGTGAATCTAGACTTAAGTGCCAATCAACTTAGTGGTCCAATTCCGACAACATTGGGGGATCTGACCAACCTTACCATTCTCACCCTCTTTTCAAATAATCTTTCTGGAACTATTCCCACGGAGATAGGAAACCTGAAATCACTAGTGAATTTAACTATGGACAAGAATCAACTCAGTGGTTCAATTCCGACAATACTGGGGGATCTGACCAACCTTACCACTCTCTTCCTTTATTCAAATAATCTTTCCGGCACTATTCCCATGAAGATAGGAAACCTGAAATCATTGGTGAATCTAGACTTGAGCGCCAATCAACTCAGTGGTCCAATTCCGACAACACTGTGGGATCTGACCAACCTTACCACTCTCTTTCTCTTTTCAAATAATCTTTCCGGCACTATTCCCATGGAGATAGGAAACCTGAAATCATTAGTGAATCTAGCCTTGAGCGAAAATCAACTCAGTGGTCCAATTCCAGCTTCATTTTGTGACTTGCATAACTTGAATGTCTTATACCTCCGTGACAACCAACTTTCTGGCTCTATCCCTCCAAAGTTAGGAAATATCCAGAAATTGATCGAATTGGAATTAGATACAAACCAATTTTCTGGTTATTTGCCACACAACATTTGCCGAGCTGGATTGCTTAGAAAGTTTACAGCAAGTACCAACCATCTAATTGGCCCAATCCCAAAAAGCTTAAAAACCTGCACGAGCTTATTCAGAGTGCGTCTTAACGGGAACCAATTGACAGGCAATATATCTGAAGTCTTTGGTGTTTATCCAAGTCTCAATTTTATAGATTTGAGCAACAATCAACTTTATGGTGAAATCTCACCAAATTGGGGATTGTGCCTAAATTTAACAACCCTACTTATAGCTGCAAACATACTTACTGGTTCTATACCAGCTGAGATTGGAAACGCAACCCAAATTCATGTGCTGGATCTTTCTTTAAATGGTTTAGTTGGGACAATTCCAAAGGAGTTTGGGGGATTAAATTCAATGGTGAAGCTAATGTTGGATGACAACCAACTTTCAGGTCGTATCCCTTCAGAGTTGAAATCATTGACTGATCTAGAATATCTTGATCTCTCAGCAAACAATTTCAACGATTCAATTCCGAGCTTTGTAGGTGACTTTGTCAAGCTAAATCACTTGAATTTGAGCAACAACAAGTTCAGTCAAGCAATTCCATTTCAATTGGGGAAGTTAATTCACCTGTCCCAACTAGATTTGAGTTTTAACGCAGTTGAAGGTCAGATACCATTCGATATTAGTAATATGCAGAGTCTGGAGATACTTAATATATCCCACAACAATCTTTCTGGTTTCATTCCAACAAGTTTTGAAAATATGCTCGGGTTGTCGTATGTAGACATATCCTACAATGAGTTGGAAGGTCCACTTCCCAACAATAAAGCATTTCAAGCTGCTACTCAAGAAGCTTTACAAGAGAACAAGGGCCTGTGTGGCAACGCACGATTTTTGCAACCCTGCAATAAACAAATCCCAAAAAAGGACCATAAACTCATATTTATGATAATCTTCCCTATTCTTGGAGCAGTTGCGGTTCTAGCCTTTATATTTGCATTAGTAGCAAAAAGAAAAAAAAAGCATCAGCATGGCGAAAAAACCAACATGAATGAAGAGATTTCTTTTTCAATATTAAAGTTTGATGGAAAGACGATGTTTAAGGAAATCGTACGAGCAACAGAAGATTTTGATCCCATGTATTGCATAGGGCAGGGAGAACAGGGAAGTGTCTACAAAGCAAATTTGTCATCCACTCACACAGTGGCTGTGAAGAAACTCCATTTGCCATGCAATGATGACAAGAATCTTCAAAAGGCATTCTTGAATGAAATTAGGGTACTAACCGAGATGCATCACCGAAATATTGTGAAGCTTTATGGCTTCTGTTCACATAGGCTACACTCATATTTGGTGTATGATTATCTGGAAAAGGGTAGTTTAGCCACAATGTTGAGCAAAGATGAGGAAGCTGAAGAACTGGGGTGGAGTAAAAGGGTGAATATAGTTAAAGGTGTAGCTCATGCCTTGTGTTACATGCATCACGATTGTTTGCCACCGATTGTGCATCGGGACATATCGAGCAAGAATATTTTGCTGGATGATGAGTATGAGGCCTGTGTTGCAGACTTTGGCACTGCTAAATTCTTAAACCCAGACTCAGCTAATTGGACTGCCCTTGCAGGCACATATGGATATATTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAGAAGTGTGATGTTTATAGCTTTGGAGTGGTGACATTGGAGACAGTTATGGGAAGACATCCGGGAGATCTTCTCTCATCTCTATCATCATCGTTAACTGCATTACGAGCCCATCAAATGCCAGTTGTGGATGTTTTGGACCAACGCATTCCCCCTCCTACACGTGAAGTCGCAGGAGAAGTTGTCTCTGTTGTGAAGGTTTCAATGGCGTATTTCCAGAACGATGACCTGGAAAGCATACCAATGCTCAAGCATAGCAATTCCCCCAAATTTCGATGCGTCTTGCATCAGATCGCCGCCGCCACCGCCGCCTCCGGCTCCGGCTTTCTCCACGGCACAGTCACCTCCACCATCACTCAAGTCGCTGTCACCGCCGTCACCAAACTCGAAAGACAGCCAGTTTGGGCTGTGATCCAAAGGTGCAAAACCGGAGACCCTTATTTAGTCCATTGCATCCATACGGCGACGTCGTTGAGTATGAGGAAGACAACGCTTTTGCTGATAACCAGTCCCGGCGAAGCCTCGAGGTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

2814

Amino Acids

305.76

Weight (kDa)

6.27

Isoelectric Point (pI)

28.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 2 - 88 1.1e-07 Leucine-rich repeat region
LRR_14 PF23598 94 - 184 2.6e-08 Leucine-rich repeat region
LRR_14 PF23598 144 - 232 3.7e-08 Leucine-rich repeat region
LRR_14 PF23598 190 - 280 3.1e-10 Leucine-rich repeat region
LRR_14 PF23598 229 - 446 6.3e-13 Leucine-rich repeat region
LRR_8 PF13855 439 - 499 5.1e-06 Leucine rich repeat
LRR_14 PF23598 506 - 593 1.5e-08 Leucine-rich repeat region
LRR_8 PF13855 560 - 619 2.6e-09 Leucine rich repeat
Pkinase PF00069 733 - 930 1.6e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 734 - 930 1.9e-37 Protein tyrosine and serine/threonine kinase
Beta-prop_WDR5 PF25175 1082 - 1173 8.7e-08 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 1088 - 1196 1.7e-12 THOC3 beta-propeller domain
WD40_Prp19 PF24814 1103 - 1168 5.1e-06 Prp19 WD40 domain
Pkinase PF00069 1237 - 1284 8.8e-06 Protein kinase domain
LRR_14 PF23598 1567 - 1667 1e-08 Leucine-rich repeat region
LRR_8 PF13855 1614 - 1674 4e-06 Leucine rich repeat
LRR_14 PF23598 1628 - 1718 2.4e-12 Leucine-rich repeat region
LRR_4 PF12799 1638 - 1675 3.7e-07 Leucine Rich repeats (2 copies)
LRR_14 PF23598 1724 - 1813 1.9e-08 Leucine-rich repeat region
LRR_14 PF23598 1773 - 1860 4.4e-10 Leucine-rich repeat region
LRR_14 PF23598 1802 - 1910 1.8e-10 Leucine-rich repeat region
LRR_14 PF23598 1869 - 1958 5e-09 Leucine-rich repeat region
LRR_14 PF23598 1917 - 2004 2.3e-07 Leucine-rich repeat region
LRR_8 PF13855 1950 - 2010 7.6e-06 Leucine rich repeat
LRR_14 PF23598 1964 - 2153 8.9e-11 Leucine-rich repeat region
Pkinase PF00069 2460 - 2661 2.8e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 2461 - 2659 1.4e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8378
AbsI CCTCGAGG 1 cut(s) 8431
Acc36I ACCTGC 2 cut(s) 1175, 6356
AccB1I GGYRCC 3 cut(s) 3143, 3315, 4232
AccB7I CCANNNNNTGG 1 cut(s) 4829
AccI GTMKAC 4 cut(s) 1836, 2226, 7017, 7407
AccIII TCCGGA 1 cut(s) 3512
AcoI YGGCCR 3 cut(s) 3057, 3465, 4357
AcvI CACGTG 3 cut(s) 2906, 4010, 8072
AcyI GRCGYC 3 cut(s) 3114, 4233, 8375
AdeI CACNNNGTG 1 cut(s) 7438
AfaI GTAC 8 cut(s) 1432, 4126, 4526, 4537, 4666, 6307, 7347, 7515
AflII CTTAAG 1 cut(s) 5653
AflIII ACRYGT 4 cut(s) 2903, 3611, 4007, 8069
AhlI ACTAGT 2 cut(s) 5494, 5782
AjnI CCWGG 5 cut(s) 2788, 2949, 4143, 4176, 8136
AjuI GAANNNNNNNTTGG 6 cut(s) 1463, 1495, 6103, 6135, 6644, 6676
AleI CACNNNNGTG 2 cut(s) 921, 5238
Alw21I GWGCWC 2 cut(s) 623, 5228
AlwNI CAGNNNCTG 5 cut(s) 1753, 2261, 3576, 6934, 7442
Ama87I CYCGRG 2 cut(s) 7001, 8431
Aor13HI TCCGGA 1 cut(s) 3512
ApeKI GCWGC 5 cut(s) 1474, 1892, 4616, 6521, 7073
ArsI GACNNNNNNTTYG 6 cut(s) 3225, 3257, 8292, 8324, 8386, 8418
Asp700I GAANNNNTTC 2 cut(s) 2312, 4759
AsuC2I CCSGG 5 cut(s) 3320, 3895, 4504, 7971, 8421
AvaI CYCGRG 2 cut(s) 7001, 8431
BaeGI GKGCMC 5 cut(s) 47, 1316, 2335, 3288, 3320
BalI TGGCCA 3 cut(s) 3059, 3467, 4359
BanI GGYRCC 3 cut(s) 3143, 3315, 4232
BanII GRGCYC 2 cut(s) 5269, 8020
BarI GAAGNNNNNNTAC 4 cut(s) 1707, 1739, 6888, 6920
BauI CACGAG 1 cut(s) 6352
BbrPI CACGTG 3 cut(s) 2906, 4010, 8072
BbsI GAAGAC 8 cut(s) 1818, 2788, 3076, 3659, 3893, 4826, 7969, 8399
Bbv12I GWGCWC 2 cut(s) 623, 5228
BbvCI CCTCAGC 1 cut(s) 4718
BbvI GCAGC 5 cut(s) 1461, 1879, 4603, 6508, 7060
BciT130I CCWGG 5 cut(s) 2790, 2951, 4145, 4178, 8138
BciVI GTATCC 2 cut(s) 3836, 6698
BcnI CCSGG 5 cut(s) 3320, 3895, 4504, 7971, 8421
BcuI ACTAGT 2 cut(s) 5494, 5782
BfmI CTRYAG 3 cut(s) 403, 3361, 5072
BfoI RGCGCY 8 cut(s) 192, 336, 480, 768, 4236, 5319, 5373, 5949
BfrI CTTAAG 1 cut(s) 5653
BfuAI ACCTGC 2 cut(s) 1175, 6356
BfuI GTATCC 2 cut(s) 3836, 6698
BglI GCCNNNNNGGC 2 cut(s) 4346, 7113
BglII AGATCT 3 cut(s) 2794, 3899, 7975
BlpI GCTNAGC 2 cut(s) 3474, 4934
BmcAI AGTACT 1 cut(s) 4126
BmeT110I CYCGRG 2 cut(s) 7001, 8431
BpiI GAAGAC 8 cut(s) 1818, 2788, 3076, 3659, 3893, 4826, 7969, 8399
BplI GAGNNNNNCTC 4 cut(s) 2784, 2816, 7965, 7997
BpmI CTGGAG 3 cut(s) 1775, 2811, 6956
Bpu10I CCTNAGC 1 cut(s) 4718
Bpu1102I GCTNAGC 2 cut(s) 3474, 4934
BpuMI CCSGG 5 cut(s) 3320, 3895, 4504, 7971, 8421
BsaAI YACGTR 3 cut(s) 2906, 4010, 8072
BsaBI GATNNNNATC 2 cut(s) 1488, 7365
BsaHI GRCGYC 3 cut(s) 3114, 4233, 8375
BsaI GGTCTC 2 cut(s) 4371, 8334
BsaWI WCCGGW 5 cut(s) 2698, 3122, 3512, 4373, 8336
BsaXI ACNNNNNCTCC 8 cut(s) 2910, 2940, 3104, 3134, 4014, 4044, 8076, 8106
Bse8I GATNNNNATC 2 cut(s) 1488, 7365
BseAI TCCGGA 1 cut(s) 3512
BseBI CCWGG 5 cut(s) 2790, 2951, 4145, 4178, 8138
BseJI GATNNNNATC 2 cut(s) 1488, 7365
BseRI GAGGAG 4 cut(s) 2966, 2969, 4207, 4210
BseSI GKGCMC 5 cut(s) 47, 1316, 2335, 3288, 3320
BseXI GCAGC 5 cut(s) 1461, 1879, 4603, 6508, 7060
BsgI GTGCAG 2 cut(s) 1153, 6334
BshNI GGYRCC 3 cut(s) 3143, 3315, 4232
BsiHKAI GWGCWC 2 cut(s) 623, 5228
BsiHKCI CYCGRG 2 cut(s) 7001, 8431
BsiWI CGTACG 1 cut(s) 7345
BslFI GGGAC 9 cut(s) 1493, 1669, 3379, 3540, 3734, 6625, 6850, 7760, 8403
BsmFI GGGAC 9 cut(s) 1493, 1669, 3379, 3540, 3734, 6625, 6850, 7760, 8403
BsmI GAATGC 3 cut(s) 2312, 7493, 8055
Bso31I GGTCTC 2 cut(s) 4371, 8334
BsoBI CYCGRG 2 cut(s) 7001, 8431
Bsp1286I GDGCHC 9 cut(s) 47, 623, 1316, 2335, 3288, 3320, 5228, 5269, 8020
Bsp13I TCCGGA 1 cut(s) 3512
Bsp1720I GCTNAGC 2 cut(s) 3474, 4934
BspEI TCCGGA 1 cut(s) 3512
BspHI TCATGA 2 cut(s) 1396, 2163
BspMI ACCTGC 2 cut(s) 1175, 6356
BspT107I GGYRCC 3 cut(s) 3143, 3315, 4232
BspTI CTTAAG 1 cut(s) 5653
BspTNI GGTCTC 2 cut(s) 4371, 8334
BssNI GRCGYC 3 cut(s) 3114, 4233, 8375
BssSI CACGAG 1 cut(s) 6352
Bst2BI CACGAG 1 cut(s) 6352
Bst2UI CCWGG 5 cut(s) 2790, 2951, 4145, 4178, 8138
Bst6I CTCTTC 4 cut(s) 5294, 5582, 5870, 7284
BstACI GRCGYC 3 cut(s) 3114, 4233, 8375
BstAFI CTTAAG 1 cut(s) 5653
BstBAI YACGTR 3 cut(s) 2906, 4010, 8072
BstH2I RGCGCY 8 cut(s) 192, 336, 480, 768, 4236, 5319, 5373, 5949
BstNI CCWGG 5 cut(s) 2790, 2951, 4145, 4178, 8138
BstNSI RCATGY 5 cut(s) 1819, 2533, 3615, 4059, 7714
BstSFI CTRYAG 3 cut(s) 403, 3361, 5072
BstSLI GKGCMC 5 cut(s) 47, 1316, 2335, 3288, 3320
BstV1I GCAGC 5 cut(s) 1461, 1879, 4603, 6508, 7060
BstV2I GAAGAC 8 cut(s) 1818, 2788, 3076, 3659, 3893, 4826, 7969, 8399
BstXI CCANNNNNNTGG 5 cut(s) 2473, 4593, 6176, 6248, 6320
BsuI GTATCC 2 cut(s) 3836, 6698
BtgZI GCGATG 3 cut(s) 2751, 3175, 4252
BtsI GCAGTG 3 cut(s) 2628, 3783, 7809
BveI ACCTGC 2 cut(s) 1175, 6356
CaiI CAGNNNCTG 5 cut(s) 1753, 2261, 3576, 6934, 7442
CciI TCATGA 2 cut(s) 1396, 2163
CseI GACGC 4 cut(s) 3019, 3122, 6359, 8176
Csp6I GTAC 8 cut(s) 1431, 4125, 4525, 4536, 4665, 6306, 7346, 7514
CspCI CAANNNNNGTGG 4 cut(s) 3187, 3222, 5529, 5564
CviQI GTAC 8 cut(s) 1431, 4125, 4525, 4536, 4665, 6306, 7346, 7514
DinI GGCGCC 1 cut(s) 4234
DraI TTTAAA 3 cut(s) 3438, 3798, 6597
DraIII CACNNNGTG 1 cut(s) 7438
EaeI YGGCCR 3 cut(s) 3057, 3465, 4357
Eam1104I CTCTTC 4 cut(s) 5294, 5582, 5870, 7284
EarI CTCTTC 4 cut(s) 5294, 5582, 5870, 7284
EciI GGCGGA 1 cut(s) 4953
Eco147I AGGCCT 3 cut(s) 2609, 3764, 7790
Eco24I GRGCYC 2 cut(s) 5269, 8020
Eco31I GGTCTC 2 cut(s) 4371, 8334
Eco72I CACGTG 3 cut(s) 2906, 4010, 8072
Eco88I CYCGRG 2 cut(s) 7001, 8431
EcoO109I RGGNCCY 2 cut(s) 3274, 7105
EcoRI GAATTC 3 cut(s) 1565, 4063, 4676
EcoRII CCWGG 5 cut(s) 2788, 2949, 4143, 4176, 8136
EcoT22I ATGCAT 5 cut(s) 1821, 2535, 4592, 7530, 7716
EcoT38I GRGCYC 2 cut(s) 5269, 8020
EgeI GGCGCC 1 cut(s) 4234
EheI GGCGCC 1 cut(s) 4234
FalI AAGNNNNNCTT 8 cut(s) 2300, 2332, 3651, 3683, 7032, 7064, 7481, 7513
FaqI GGGAC 9 cut(s) 1493, 1669, 3379, 3540, 3734, 6625, 6850, 7760, 8403
FauI CCCGC 2 cut(s) 1333, 4827
FauNDI CATATG 3 cut(s) 2683, 3838, 7864
FblI GTMKAC 4 cut(s) 1836, 2226, 7017, 7407
FriOI GRGCYC 2 cut(s) 5269, 8020
GsuI CTGGAG 3 cut(s) 1775, 2811, 6956
HaeII RGCGCY 8 cut(s) 192, 336, 480, 768, 4236, 5319, 5373, 5949
HgaI GACGC 4 cut(s) 3019, 3122, 6359, 8176
Hin1I GRCGYC 3 cut(s) 3114, 4233, 8375
HincII GTYRAC 2 cut(s) 2838, 8004
HindII GTYRAC 2 cut(s) 2838, 8004
HindIII AAGCTT 7 cut(s) 901, 1174, 1585, 3582, 6337, 7086, 7547
HpaI GTTAAC 1 cut(s) 8004
Hpy99I CGWCG 4 cut(s) 2291, 3116, 8377, 8380
HpyCH4IV ACGT 5 cut(s) 2905, 3846, 4009, 8071, 8375
HpySE526I ACGT 5 cut(s) 2905, 3846, 4009, 8071, 8375
Hsp92I GRCGYC 3 cut(s) 3114, 4233, 8375
KasI GGCGCC 1 cut(s) 4232
Kpn2I TCCGGA 1 cut(s) 3512
KspAI GTTAAC 1 cut(s) 8004
LmnI GCTCC 6 cut(s) 2021, 2701, 2979, 4220, 7202, 8231
Lsp1109I GCAGC 5 cut(s) 1461, 1879, 4603, 6508, 7060
MaeII ACGT 5 cut(s) 2905, 3846, 4009, 8071, 8375
MfeI CAATTG 4 cut(s) 1205, 4575, 6386, 6842
MhlI GDGCHC 9 cut(s) 47, 623, 1316, 2335, 3288, 3320, 5228, 5269, 8020
MlsI TGGCCA 3 cut(s) 3059, 3467, 4359
MluNI TGGCCA 3 cut(s) 3059, 3467, 4359
Mly113I GGCGCC 1 cut(s) 4233
MlyI GAGTC 6 cut(s) 1759, 2660, 3401, 3800, 6940, 7826
Mox20I TGGCCA 3 cut(s) 3059, 3467, 4359
Mph1103I ATGCAT 5 cut(s) 1821, 2535, 4592, 7530, 7716
MroI TCCGGA 1 cut(s) 3512
MroXI GAANNNNTTC 2 cut(s) 2312, 4759
MscI TGGCCA 3 cut(s) 3059, 3467, 4359
Msp20I TGGCCA 3 cut(s) 3059, 3467, 4359
MspA1I CMGCKG 2 cut(s) 4722, 6551
MspCI CTTAAG 1 cut(s) 5653
MunI CAATTG 4 cut(s) 1205, 4575, 6386, 6842
Mva1269I GAATGC 3 cut(s) 2312, 7493, 8055
MvaI CCWGG 5 cut(s) 2790, 2951, 4145, 4178, 8138
NarI GGCGCC 1 cut(s) 4233
NciI CCSGG 5 cut(s) 3320, 3895, 4504, 7971, 8421
NdeI CATATG 3 cut(s) 2683, 3838, 7864
NmeAIII GCCGAG 2 cut(s) 1118, 6299
NsiI ATGCAT 5 cut(s) 1821, 2535, 4592, 7530, 7716
NspI RCATGY 5 cut(s) 1819, 2533, 3615, 4059, 7714
OliI CACNNNNGTG 2 cut(s) 921, 5238
PaeI GCATGC 1 cut(s) 4059
PaeR7I CTCGAG 1 cut(s) 8431
PagI TCATGA 2 cut(s) 1396, 2163
PceI AGGCCT 3 cut(s) 2609, 3764, 7790
PciI ACATGT 1 cut(s) 3611
PcsI WCGNNNNNNNCGW 1 cut(s) 8375
PctI GAATGC 3 cut(s) 2312, 7493, 8055
PdmI GAANNNNTTC 2 cut(s) 2312, 4759
Pfl23II CGTACG 1 cut(s) 7345
PflFI GACNNNGTC 1 cut(s) 6782
PflMI CCANNNNNTGG 1 cut(s) 4829
PfoI TCCNGGA 3 cut(s) 2788, 3893, 7969
PleI GAGTC 6 cut(s) 1758, 2659, 3400, 3800, 6939, 7826
PluTI GGCGCC 1 cut(s) 4236
PmaCI CACGTG 3 cut(s) 2906, 4010, 8072
PmlI CACGTG 3 cut(s) 2906, 4010, 8072
PpsI GAGTC 6 cut(s) 1758, 2659, 3400, 3800, 6939, 7826
Ppu21I YACGTR 3 cut(s) 2906, 4010, 8072
PscI ACATGT 1 cut(s) 3611
Psp6I CCWGG 5 cut(s) 2788, 2949, 4143, 4176, 8136
PspCI CACGTG 3 cut(s) 2906, 4010, 8072
PspGI CCWGG 5 cut(s) 2788, 2949, 4143, 4176, 8136
PspLI CGTACG 1 cut(s) 7345
PspXI VCTCGAGB 1 cut(s) 8431
PstNI CAGNNNCTG 5 cut(s) 1753, 2261, 3576, 6934, 7442
PsyI GACNNNGTC 1 cut(s) 6782
PvuII CAGCTG 2 cut(s) 4722, 6551
RsaI GTAC 8 cut(s) 1432, 4126, 4526, 4537, 4666, 6307, 7347, 7515
RsaNI GTAC 8 cut(s) 1431, 4125, 4525, 4536, 4665, 6306, 7346, 7514
ScaI AGTACT 1 cut(s) 4126
SchI GAGTC 6 cut(s) 1759, 2660, 3401, 3800, 6940, 7826
SduI GDGCHC 9 cut(s) 47, 623, 1316, 2335, 3288, 3320, 5228, 5269, 8020
SfcI CTRYAG 3 cut(s) 403, 3361, 5072
SfoI GGCGCC 1 cut(s) 4234
Sfr274I CTCGAG 1 cut(s) 8431
SlaI CTCGAG 1 cut(s) 8431
SpeI ACTAGT 2 cut(s) 5494, 5782
SphI GCATGC 1 cut(s) 4059
SseBI AGGCCT 3 cut(s) 2609, 3764, 7790
SspDI GGCGCC 1 cut(s) 4232
SspI AATATT 8 cut(s) 2127, 2359, 2584, 4876, 5020, 7308, 7540, 7765
StuI AGGCCT 3 cut(s) 2609, 3764, 7790
TaiI ACGT 5 cut(s) 2908, 3849, 4012, 8074, 8378
TatI WGTACW 1 cut(s) 4124
TauI GCSGC 5 cut(s) 3110, 3119, 8207, 8210, 8219
TseI GCWGC 5 cut(s) 1474, 1892, 4616, 6521, 7073
TspGWI ACGGA 6 cut(s) 1178, 3070, 3642, 3671, 5774, 6149
Tth111I GACNNNGTC 1 cut(s) 6782
Van91I CCANNNNNTGG 1 cut(s) 4829
Vha464I CTTAAG 1 cut(s) 5653
XbaI TCTAGA 8 cut(s) 178, 466, 754, 1537, 5359, 5647, 5935, 6718
XceI RCATGY 5 cut(s) 1819, 2533, 3615, 4059, 7714
XcmI CCANNNNNNNNNTGG 2 cut(s) 2254, 7435
XhoI CTCGAG 1 cut(s) 8431
XmiI GTMKAC 4 cut(s) 1836, 2226, 7017, 7407
XmnI GAANNNNTTC 2 cut(s) 2312, 4759
ZraI GACGTC 1 cut(s) 8376
ZrmI AGTACT 1 cut(s) 4126
Zsp2I ATGCAT 5 cut(s) 1821, 2535, 4592, 7530, 7716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.