Rroxscaffold_3G00221130

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
3779445 .. 3781886
2442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00221130.1

Sequence Viewer

Length: 2250 bp
ATGTATCTTGATCTCTCCAATAATCAGTTGTCCGGGAGAATCCCACAAGAAATTGGTTTCCTCATAAGCCTTCACACCCTACAGCTCAATAAAAATCAGTTGAATGGGTCGATTCCTCAAGAAATAGGTCAGCTTAAGTCTCTTCTTGTTCTTAGTCTCATAGAAAATCGCCTCACTGGTCCTCTTCCGTTGTCAATTGGTAATTTAAGCAAGTTAGAGGTTCTATACATTCGGGACAACCAAGTCTCCGGCTCCATTCCTCATGTGATAGGGAATCTCAAGAATCTGGTTGTGCTAAGAGTTGCCAGAAACAATTTGACCGGTCATTTGCCTCTGAATCTCTGTCAAGGTGGGCGTCTTACTAATTTCACTGCAAATAGCAATCGTCTGATAGGTCCAATCCCCAAAAGCCTGAAAAACTGCAGAACATTATACAGAGTCCGCCTTGATAGAAACCAACTCACTGGAAACATATCTGAAGATTTTGGTGAATATCCAAACTTGGATTACATAAATCTAAGCGACAATAAATTTTACGGAGAACTTTCACCGAAATGGGGTAGGTCTCTGAAGCTAACAAATCTTGAGATTGCAGGCAACAATATTACTGGTACCATTCCACCTGAGATTGGAAACTTGACTCAACTGCAGTTGCTTAATCTTTCTTCAAATCATTTGGTGGGAAACATCCCTGTGGAACTTGGAAGGCTCACTTCGTTAGGGAAGCTTATACTGAAAGACAACCAACTCTCTGGTGGTTTACCTCAAGAGCTTGGATCACTGACTGAACTTGAGTATCTTGACCTGTCCACAAACAAATTGAGCCAGTCAATCCCAAGTAGCCTAGGTAACTTTCTGAAGCTGCACCATATCAATGCCAGCAACAACAAGTTAAGCCAAAGAATTCCATTTCAATTCAGGAGTTTAACTCAGCTGTCCGTGCTAGATTTGAGTCACAATGGTCTTGATCGAGAGATACCAACAGAGCTTAGTAATTTGAAAAGTTTGGTGACACTAAATCTTTCCCACAATAATCTCTCTGGAGTTATTCCAAAGAGTTTTGATGAACTTCGTGGCTTGGAGCACATCGACATATCATACAATCAATTCTGGGGTCCCATCCCAAACAATAAGGCATTTCATGAGGCTCCGATTGAAGCATTGAAGGGAAACAAGGGGTTGTGTGGAAATGTTACAGGTTTTCTGCCCTGCCTTATTAATCTGGAAGATAAGAAGCACAGTTCGAAAACTGGTGTAAAAGCTGTGTGCTTACTCATCCTGCCTGTCCTGGGTGCAGTTATATTTGCTTGGTTCATGTTACTAAGGAAAAAGACATGTCAACAAACAAGGCAAAAAGACATGTACCTACAACAGTTTGAATTGCGTTCCGTATCACTTTTTGACGGGAGATTATTGTATGAAGAAATTGTAAAAGCAACTGAGAATTTTGATGCTGCTTATTGTATCGGGAAGGGAGGGTTTGGAAGCGTTTACAAAGCAAAGCTTCCATCAGAAGAAGTGGTAGCTGTAAAGAAACTCCACAGTGCATGTGATGGGGAAGGCAGCTTTCAAAAAGAGTTCTTAAGCGAGGTAAGGGCCTTGACGGAGATACGGCATCGAAACATTGTGAAGCTCTATGGTTTCTGTTCACATACCCGGAACTCTCTATTGGTTTATGAGTACCTTGAAACGGGTAGCTTGTTTTCAATCTTGTGCAATGAAGAAGAAGCAAAGAAATTGGATTGGAGTAAAAGGGTGACTATCATTAAAGGTGTAGCCCATGGCTTATCCTACATGCACAATGATGTGTCCCCGCCAATTGTTCATCGAGACATATCCAGCAAGAACATTTTGCTAGACGCCGACTATGAGGCTCACATCTCAGACTTTGGCACTGCCAAGCTTCTAGAGCATGACTCATCTAACTGGACTGCCGTTGCAGGCACAGTTGGATACATAGCACCAGAGCTGGCTTACACAATGAAAGTGACAGAGAAATGTGACGTGTATAGCTTCGGCGTGTTAGCACTTGAAGTGATGAAAGGGAAGTACCCTAGCAATCTAGTTCAATTACTCTTATCACCTGCAACCAGGGAAGCCAAAATGTGGGAGGATATGTGGGACGATCGCCTTGAACCTCCCACAGGTAAAGTTCTGGATGAAGTTGTCACTATTTTAACACTAGCAATTGCATGCTTACACGAAAACCCACAGTTTAGGCCTAACATGTATGAAGTTGCCCAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

749

Amino Acids

83.52

Weight (kDa)

7.59

Isoelectric Point (pI)

36.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 2 - 101 1.1e-11 Leucine-rich repeat region
LRR_14 PF23598 137 - 295 4.9e-11 Leucine-rich repeat region
LRR_8 PF13855 311 - 370 1.2e-10 Leucine rich repeat
Pkinase PF00069 488 - 748 2.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 489 - 747 6.3e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2092
AasI GACNNNNNNGTC 1 cut(s) 242
Acc36I ACCTGC 1 cut(s) 2092
Acc65I GGTACC 1 cut(s) 611
AccB1I GGYRCC 1 cut(s) 611
AccB7I CCANNNNNTGG 1 cut(s) 2106
AciI CCGC 2 cut(s) 442, 1814
AclWI GGATC 1 cut(s) 784
AcsI RAATTY 3 cut(s) 530, 903, 1444
AcuI CTGAAG 3 cut(s) 498, 590, 878
AcyI GRCGYC 2 cut(s) 355, 1860
AfaI GTAC 4 cut(s) 613, 1364, 1682, 2051
AfiI CCNNNNNNNGG 6 cut(s) 557, 629, 1289, 1690, 2106, 2144
AflII CTTAAG 2 cut(s) 134, 1582
AflIII ACRYGT 4 cut(s) 1334, 1359, 2004, 2226
AgeI ACCGGT 1 cut(s) 320
AjiI CACGTC 1 cut(s) 2005
AjnI CCWGG 2 cut(s) 1287, 2090
AjuI GAANNNNNNNTTGG 2 cut(s) 1652, 1684
Alw21I GWGCWC 1 cut(s) 1086
Alw26I GTCTC 5 cut(s) 144, 161, 250, 570, 1824
AlwI GGATC 1 cut(s) 784
AoxI GGCC 2 cut(s) 1596, 2219
ApeKI GCWGC 3 cut(s) 862, 1454, 1563
ApoI RAATTY 3 cut(s) 530, 903, 1444
ArsI GACNNNNNNTTYG 2 cut(s) 310, 342
AseI ATTAAT 1 cut(s) 1218
AsiGI ACCGGT 1 cut(s) 320
Asp718I GGTACC 1 cut(s) 611
AspA2I CCTAGG 1 cut(s) 844
AspS9I GGNCC 4 cut(s) 179, 395, 1115, 1596
AsuC2I CCSGG 2 cut(s) 34, 1657
AsuHPI GGTGA 5 cut(s) 500, 540, 1021, 1768, 2073
AsuII TTCGAA 1 cut(s) 1244
AvaII GGWCC 3 cut(s) 179, 395, 1115
AvrII CCTAGG 1 cut(s) 844
BaeI ACNNNNGTAYC 2 cut(s) 779, 812
BanI GGYRCC 1 cut(s) 611
Bbv12I GWGCWC 1 cut(s) 1086
BbvI GCAGC 3 cut(s) 849, 1441, 1575
BccI CCATC 3 cut(s) 1127, 1516, 1547
BceAI ACGGC 2 cut(s) 1628, 1919
BciT130I CCWGG 2 cut(s) 1289, 2092
BciVI GTATCC 1 cut(s) 1946
BcnI CCSGG 2 cut(s) 34, 1657
BcoDI GTCTC 5 cut(s) 144, 161, 250, 570, 1824
BfaI CTAG 7 cut(s) 845, 944, 1856, 1907, 2055, 2063, 2183
BfmI CTRYAG 3 cut(s) 80, 421, 647
BfrI CTTAAG 2 cut(s) 134, 1582
BfuAI ACCTGC 1 cut(s) 2092
BfuI GTATCC 1 cut(s) 1946
BisI GCNGC 3 cut(s) 863, 1455, 1564
BlnI CCTAGG 1 cut(s) 844
BlsI GCNGC 3 cut(s) 864, 1456, 1565
Bme1390I CCNGG 4 cut(s) 34, 1289, 1657, 2092
Bme18I GGWCC 3 cut(s) 179, 395, 1115
BmgBI CACGTC 1 cut(s) 2005
BmgT120I GGNCC 4 cut(s) 179, 395, 1115, 1596
BmiI GGNNCC 5 cut(s) 253, 613, 1116, 1117, 1149
BmrFI CCNGG 4 cut(s) 34, 1289, 1657, 2092
BmsI GCATC 2 cut(s) 1441, 1624
BplI GAGNNNNNCTC 4 cut(s) 913, 945, 1901, 1933
BpmI CTGGAG 1 cut(s) 1062
Bpu14I TTCGAA 1 cut(s) 1244
BpuEI CTTGAG 5 cut(s) 102, 263, 605, 750, 812
BpuMI CCSGG 2 cut(s) 34, 1657
BsaHI GRCGYC 2 cut(s) 355, 1860
BsaI GGTCTC 1 cut(s) 570
BsaJI CCNNGG 4 cut(s) 844, 1288, 1780, 2091
BsaWI WCCGGW 1 cut(s) 320
BsaXI ACNNNNNCTCC 4 cut(s) 230, 260, 2102, 2132
Bsc4I CCNNNNNNNGG 6 cut(s) 557, 629, 1289, 1690, 2106, 2144
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 6 cut(s) 181, 469, 613, 826, 1255, 1931
Bse3DI GCAATG 1 cut(s) 1723
BseBI CCWGG 2 cut(s) 1289, 2092
BseDI CCNNGG 4 cut(s) 844, 1288, 1780, 2091
BseGI GGATG 4 cut(s) 687, 1119, 1275, 2164
BseLI CCNNNNNNNGG 6 cut(s) 557, 629, 1289, 1690, 2106, 2144
BseMI GCAATG 1 cut(s) 1723
BseMII CTCAG 4 cut(s) 615, 944, 1431, 1896
BseNI ACTGG 6 cut(s) 181, 469, 613, 826, 1255, 1931
BseXI GCAGC 3 cut(s) 849, 1441, 1575
BsgI GTGCAG 2 cut(s) 848, 1314
Bsh1285I CGRYCG 1 cut(s) 2128
BshFI GGCC 2 cut(s) 1598, 2221
BshNI GGYRCC 1 cut(s) 611
BshTI ACCGGT 1 cut(s) 320
BsiEI CGRYCG 1 cut(s) 2128
BsiHKAI GWGCWC 1 cut(s) 1086
BsiSI CCGG 4 cut(s) 33, 249, 321, 1657
BslFI GGGAC 4 cut(s) 248, 1101, 1795, 2135
BslI CCNNNNNNNGG 6 cut(s) 557, 629, 1289, 1690, 2106, 2144
BsmAI GTCTC 5 cut(s) 144, 161, 250, 570, 1824
BsmFI GGGAC 4 cut(s) 248, 1101, 1795, 2135
BsnI GGCC 2 cut(s) 1598, 2221
Bso31I GGTCTC 1 cut(s) 570
Bsp119I TTCGAA 1 cut(s) 1244
Bsp1286I GDGCHC 1 cut(s) 1086
Bsp143I GATC 4 cut(s) 10, 776, 967, 2125
Bsp19I CCATGG 1 cut(s) 1780
BspACI CCGC 2 cut(s) 442, 1814
BspANI GGCC 2 cut(s) 1598, 2221
BspCNI CTCAG 4 cut(s) 616, 943, 1432, 1895
BspHI TCATGA 1 cut(s) 1141
BspLI GGNNCC 5 cut(s) 253, 613, 1116, 1117, 1149
BspMAI CTGCAG 2 cut(s) 425, 651
BspMI ACCTGC 1 cut(s) 2092
BspPI GGATC 1 cut(s) 784
BspT104I TTCGAA 1 cut(s) 1244
BspT107I GGYRCC 1 cut(s) 611
BspTI CTTAAG 2 cut(s) 134, 1582
BspTNI GGTCTC 1 cut(s) 570
BsrDI GCAATG 1 cut(s) 1723
BsrFI RCCGGY 1 cut(s) 320
BsrI ACTGG 6 cut(s) 181, 469, 613, 826, 1255, 1931
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 4 cut(s) 844, 1288, 1780, 2091
BssMI GATC 4 cut(s) 10, 776, 967, 2125
BssNI GRCGYC 2 cut(s) 355, 1860
BssT1I CCWWGG 2 cut(s) 844, 1780
Bst2UI CCWGG 2 cut(s) 1289, 2092
Bst4CI ACNGT 5 cut(s) 1241, 1374, 1544, 1948, 2214
Bst6I CTCTTC 2 cut(s) 147, 189
BstACI GRCGYC 2 cut(s) 355, 1860
BstAFI CTTAAG 2 cut(s) 134, 1582
BstBI TTCGAA 1 cut(s) 1244
BstC8I GCNNGC 5 cut(s) 595, 880, 1942, 1971, 2194
BstDEI CTNAG 9 cut(s) 152, 296, 518, 624, 930, 989, 1322, 1440, 1882
BstDSI CCRYGG 1 cut(s) 1780
BstENI CCTNNNNNAGG 1 cut(s) 2142
BstF5I GGATG 4 cut(s) 687, 1119, 1275, 2164
BstKTI GATC 4 cut(s) 13, 779, 970, 2128
BstMAI GTCTC 5 cut(s) 144, 161, 250, 570, 1824
BstMBI GATC 4 cut(s) 10, 776, 967, 2125
BstMCI CGRYCG 1 cut(s) 2128
BstMWI GCNNNNNNNGC 2 cut(s) 940, 1909
BstNI CCWGG 2 cut(s) 1289, 2092
BstNSI RCATGY 6 cut(s) 1338, 1363, 1551, 1798, 2196, 2230
BstSCI CCNGG 4 cut(s) 32, 1287, 1655, 2090
BstSFI CTRYAG 3 cut(s) 80, 421, 647
BstV1I GCAGC 3 cut(s) 849, 1441, 1575
BstXI CCANNNNNNTGG 2 cut(s) 464, 752
BsuI GTATCC 1 cut(s) 1946
BsuRI GGCC 2 cut(s) 1598, 2221
BtgI CCRYGG 1 cut(s) 1780
BtrI CACGTC 1 cut(s) 2005
BtsCI GGATG 4 cut(s) 687, 1119, 1275, 2164
BtsI GCAGTG 2 cut(s) 369, 1893
BtsIMutI CAGTG 6 cut(s) 174, 369, 462, 779, 1549, 1893
BveI ACCTGC 1 cut(s) 2092
Cac8I GCNNGC 5 cut(s) 595, 880, 1942, 1971, 2194
CciI TCATGA 1 cut(s) 1141
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 4 cut(s) 179, 395, 1115, 1596
CseI GACGC 2 cut(s) 344, 1868
Csp6I GTAC 4 cut(s) 612, 1363, 1681, 2050
CspAI ACCGGT 1 cut(s) 320
CviQI GTAC 4 cut(s) 612, 1363, 1681, 2050
DdeI CTNAG 9 cut(s) 152, 296, 518, 624, 930, 989, 1322, 1440, 1882
DpnI GATC 4 cut(s) 12, 778, 969, 2127
DpnII GATC 4 cut(s) 10, 776, 967, 2125
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
Eam1104I CTCTTC 2 cut(s) 147, 189
EarI CTCTTC 2 cut(s) 147, 189
EciI GGCGGA 1 cut(s) 431
Eco130I CCWWGG 2 cut(s) 844, 1780
Eco147I AGGCCT 1 cut(s) 2221
Eco31I GGTCTC 1 cut(s) 570
Eco47I GGWCC 3 cut(s) 179, 395, 1115
Eco57I CTGAAG 3 cut(s) 498, 590, 878
EcoNI CCTNNNNNAGG 1 cut(s) 2142
EcoO109I RGGNCCY 2 cut(s) 1115, 1596
EcoRI GAATTC 1 cut(s) 903
EcoRII CCWGG 2 cut(s) 1287, 2090
EcoT14I CCWWGG 2 cut(s) 844, 1780
ErhI CCWWGG 2 cut(s) 844, 1780
FalI AAGNNNNNCTT 4 cut(s) 697, 729, 1488, 1520
FaqI GGGAC 4 cut(s) 248, 1101, 1795, 2135
FauI CCCGC 1 cut(s) 1821
Fnu4HI GCNGC 3 cut(s) 863, 1455, 1564
FokI GGATG 4 cut(s) 674, 1106, 1262, 2171
Fsp4HI GCNGC 3 cut(s) 863, 1455, 1564
FspBI CTAG 7 cut(s) 845, 944, 1856, 1907, 2055, 2063, 2183
GluI GCNGC 3 cut(s) 863, 1455, 1564
GsuI CTGGAG 1 cut(s) 1062
HaeIII GGCC 2 cut(s) 1598, 2221
HapII CCGG 4 cut(s) 33, 249, 321, 1657
HgaI GACGC 2 cut(s) 344, 1868
Hin1I GRCGYC 2 cut(s) 355, 1860
HincII GTYRAC 1 cut(s) 1340
HindII GTYRAC 1 cut(s) 1340
HindIII AAGCTT 3 cut(s) 725, 1502, 1901
HinfI GANTC 9 cut(s) 39, 112, 274, 283, 337, 438, 640, 952, 1916
HpaII CCGG 4 cut(s) 33, 249, 321, 1657
HphI GGTGA 5 cut(s) 500, 540, 1021, 1768, 2073
Hpy166II GTNNAC 5 cut(s) 761, 810, 1340, 1492, 1649
Hpy188I TCNGA 8 cut(s) 336, 390, 478, 570, 858, 1152, 1513, 1885
Hpy8I GTNNAC 5 cut(s) 761, 810, 1340, 1492, 1649
HpyAV CCTTC 5 cut(s) 80, 699, 1159, 1465, 1553
HpyCH4III ACNGT 5 cut(s) 1241, 1374, 1544, 1948, 2214
HpyCH4IV ACGT 1 cut(s) 2004
HpyF10VI GCNNNNNNNGC 2 cut(s) 940, 1909
HpyF3I CTNAG 9 cut(s) 152, 296, 518, 624, 930, 989, 1322, 1440, 1882
HpySE526I ACGT 1 cut(s) 2004
Hsp92I GRCGYC 2 cut(s) 355, 1860
KflI GGGWCCC 1 cut(s) 1115
KpnI GGTACC 1 cut(s) 615
Kzo9I GATC 4 cut(s) 10, 776, 967, 2125
LmnI GCTCC 3 cut(s) 257, 1081, 1153
Lsp1109I GCAGC 3 cut(s) 849, 1441, 1575
LweI GCATC 2 cut(s) 1441, 1624
MaeI CTAG 7 cut(s) 845, 944, 1856, 1907, 2055, 2063, 2183
MaeII ACGT 1 cut(s) 2004
MaeIII GTNAC 9 cut(s) 848, 953, 1009, 1192, 1317, 1756, 1987, 2000, 2167
MalI GATC 4 cut(s) 12, 778, 969, 2127
MboI GATC 4 cut(s) 10, 776, 967, 2125
MboII GAAGA 9 cut(s) 134, 176, 491, 657, 1238, 1433, 1526, 1733, 1736
MfeI CAATTG 3 cut(s) 195, 1818, 2187
MhlI GDGCHC 1 cut(s) 1086
MlyI GAGTC 4 cut(s) 447, 634, 961, 1910
MmeI TCCRAC 1 cut(s) 1930
MseI TTAA 9 cut(s) 135, 206, 657, 893, 926, 1218, 1583, 1767, 2177
MslI CAYNNNNRTG 4 cut(s) 553, 692, 873, 1803
MspA1I CMGCKG 1 cut(s) 934
MspCI CTTAAG 2 cut(s) 134, 1582
MspI CCGG 4 cut(s) 33, 249, 321, 1657
MspR9I CCNGG 4 cut(s) 34, 1289, 1657, 2092
MunI CAATTG 3 cut(s) 195, 1818, 2187
MvaI CCWGG 2 cut(s) 1289, 2092
MwoI GCNNNNNNNGC 2 cut(s) 940, 1909
NciI CCSGG 2 cut(s) 34, 1657
NcoI CCATGG 1 cut(s) 1780
NdeII GATC 4 cut(s) 10, 776, 967, 2125
NlaIV GGNNCC 5 cut(s) 253, 613, 1116, 1117, 1149
NmuCI GTSAC 6 cut(s) 953, 1009, 1756, 1987, 2000, 2167
NspI RCATGY 6 cut(s) 1338, 1363, 1551, 1798, 2196, 2230
NspV TTCGAA 1 cut(s) 1244
PaeI GCATGC 1 cut(s) 2196
PagI TCATGA 1 cut(s) 1141
PaqCI CACCTGC 1 cut(s) 2092
PceI AGGCCT 1 cut(s) 2221
PciI ACATGT 3 cut(s) 1334, 1359, 2226
PfeI GAWTC 5 cut(s) 39, 112, 274, 283, 337
PflMI CCANNNNNTGG 1 cut(s) 2106
PfoI TCCNGGA 1 cut(s) 32
PinAI ACCGGT 1 cut(s) 320
PkrI GCNGC 3 cut(s) 864, 1456, 1565
Ple19I CGATCG 1 cut(s) 2128
PleI GAGTC 4 cut(s) 446, 634, 960, 1910
PpsI GAGTC 4 cut(s) 446, 634, 960, 1910
PpuMI RGGWCCY 1 cut(s) 1115
PscI ACATGT 3 cut(s) 1334, 1359, 2226
PshBI ATTAAT 1 cut(s) 1218
Psp5II RGGWCCY 1 cut(s) 1115
Psp6I CCWGG 2 cut(s) 1287, 2090
PspGI CCWGG 2 cut(s) 1287, 2090
PspN4I GGNNCC 5 cut(s) 253, 613, 1116, 1117, 1149
PspPI GGNCC 4 cut(s) 179, 395, 1115, 1596
PspPPI RGGWCCY 1 cut(s) 1115
PstI CTGCAG 2 cut(s) 425, 651
PvuI CGATCG 1 cut(s) 2128
PvuII CAGCTG 1 cut(s) 934
RsaI GTAC 4 cut(s) 613, 1364, 1682, 2051
RsaNI GTAC 4 cut(s) 612, 1363, 1681, 2050
RseI CAYNNNNRTG 4 cut(s) 553, 692, 873, 1803
SaqAI TTAA 9 cut(s) 135, 206, 657, 893, 926, 1218, 1583, 1767, 2177
SatI GCNGC 3 cut(s) 863, 1455, 1564
Sau3AI GATC 4 cut(s) 10, 776, 967, 2125
Sau96I GGNCC 4 cut(s) 179, 395, 1115, 1596
SchI GAGTC 4 cut(s) 447, 634, 961, 1910
ScrFI CCNGG 4 cut(s) 34, 1289, 1657, 2092
SduI GDGCHC 1 cut(s) 1086
SfaNI GCATC 2 cut(s) 1441, 1624
SfcI CTRYAG 3 cut(s) 80, 421, 647
SfuI TTCGAA 1 cut(s) 1244
SinI GGWCC 3 cut(s) 179, 395, 1115
SmiMI CAYNNNNRTG 4 cut(s) 553, 692, 873, 1803
SmlI CTYRAG 7 cut(s) 117, 134, 278, 584, 765, 791, 1582
SmoI CTYRAG 7 cut(s) 117, 134, 278, 584, 765, 791, 1582
SphI GCATGC 1 cut(s) 2196
SseBI AGGCCT 1 cut(s) 2221
SsiI CCGC 2 cut(s) 442, 1814
SspI AATATT 1 cut(s) 604
SspMI CTAG 7 cut(s) 845, 944, 1856, 1907, 2055, 2063, 2183
StuI AGGCCT 1 cut(s) 2221
StyD4I CCNGG 4 cut(s) 32, 1287, 1655, 2090
StyI CCWWGG 2 cut(s) 844, 1780
TaaI ACNGT 5 cut(s) 1241, 1374, 1544, 1948, 2214
TaiI ACGT 1 cut(s) 2007
TaqI TCGA 6 cut(s) 110, 970, 1089, 1244, 1618, 1828
TfiI GAWTC 5 cut(s) 39, 112, 274, 283, 337
Tru1I TTAA 9 cut(s) 135, 206, 657, 893, 926, 1218, 1583, 1767, 2177
Tru9I TTAA 9 cut(s) 135, 206, 657, 893, 926, 1218, 1583, 1767, 2177
TscAI CASTG 6 cut(s) 181, 376, 469, 786, 1549, 1900
TseFI GTSAC 6 cut(s) 953, 1009, 1756, 1987, 2000, 2167
TseI GCWGC 3 cut(s) 862, 1454, 1563
Tsp45I GTSAC 6 cut(s) 953, 1009, 1756, 1987, 2000, 2167
TspGWI ACGGA 5 cut(s) 177, 552, 928, 1378, 1619
TspRI CASTG 6 cut(s) 181, 376, 469, 786, 1549, 1900
Van91I CCANNNNNTGG 1 cut(s) 2106
Vha464I CTTAAG 2 cut(s) 134, 1582
VpaK11BI GGWCC 3 cut(s) 179, 395, 1115
VspI ATTAAT 1 cut(s) 1218
XagI CCTNNNNNAGG 1 cut(s) 2142
XapI RAATTY 3 cut(s) 530, 903, 1444
XbaI TCTAGA 1 cut(s) 1906
XceI RCATGY 6 cut(s) 1338, 1363, 1551, 1798, 2196, 2230
XcmI CCANNNNNNNNNTGG 1 cut(s) 752
XmaJI CCTAGG 1 cut(s) 844
XspI CTAG 7 cut(s) 845, 944, 1856, 1907, 2055, 2063, 2183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.