Rmu_sc0004605.1_g000005

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004605.1
Physical Location & Seq
Forward (+)
29171 .. 32315
3145 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004605.1_g000005.1.cds

Sequence Viewer

Length: 3012 bp
atgggaggatcaatctttgagaaactaggctctctgtctttcctcatcatgtttgttgttttggtttggtcttccaaaggtgttgcttcagctactgtttctactgatgaagttggagctcttctccgatggaaagccagtcttcaaggtactcaatcacacctaacttcatggagtgctcagcacttcccaaatgaaacaagtccatgcacttggtttgccatttcttgcaacactgccaagagtgtcaccacaataaaccttaccaagtcgggtttacaaggtacgcttcacgaattttcattctcctccttcccgaatcttgagcactttgatctcagcatgaactcaatctttggtaccattccacctgaaatcagttggctctccaaattagtgtatcttgatttgtccggtaataagttaaatggttcagttcctgcttcttttggaaaccttagcagtcttgcttacttgaatataggtaggaactttcttgctagttcagttcctttagaaatggggaatcttacgcagttggtggagctttacttgaataccaacaaacttacaggtcagatcccacaaacttttgggaacttaagaaagctaaaagtactatacatgtttgagaacatgtttgttggttccattccactggagataggaaagttggcatctctcagcaatctaagccttcacaccaacaacttttctggcagtctcccggattcggtatgtgatctgagacaccttgctttactggaactgtatcggaacaatctttcaggcccaattccggaaaatattggaagcttgaagtctcttgttgttctaaatgtcggtgagaatcaactcagtggttctattcccacgtcaattggtaacatgagcaagttacaggttctatatatccgcgacaacaaactctctggttccattcctcaagtgattggagatcttatgaacttggctgtgctgagagtttccagcaacaatttgactggtcatttaccacagaatctctgcaaaggtggagtgcttgcaaattttacagctaatggaaatcgtctcgttggtcgaatgcctgaaagcttgagaaactgcactaccttgtatagagtccgtcttgatgggaaccaattcactggaaatatatccgaagattttggtgaatatccaaacttggattacataaatctaagtgacaataaattttatggtgaaatttcagagaaatggggcaagtctctgcggctaaaaattcttgagattgcagctaacaacataacaggttccataccaccggggattggtaatttgactcaattacatttgcttaatctttcttggaatcatttagtagggacaatccctatggtactaggagagttgacctctttcgtgaagcttatactgaatgacaatcaactttctggtgtcatacctcaagaacttggatcactgactgaccttgagtttcttgacctgtccaaaaacaacttgagccagtcgattcctagtagtctggggaacctagtgaacatccaccacctgaacttgagcagcaacaagttaagccaaggaaccccaattaagttgggtcagttgaagcagctgtctgtgctagatctgagtcataattctcttagtcaagagataccaacggagttttgtaatttggaaagcttgttgacactgaatctgtcccacaataacttctctggtgtagttccccagacttttgctgaccttcgtggcttggagttcgttgacatatcatacaatcgattatggggtccgattccagaaaacagagcatttcaagaagctcctatagaagcattgcaagggaatcaaggtctgtgtggcaatgctacaggtctagagccctgcactaagactcctggcaaaaagaagcacagctcgaacattggttacaaagtcgtgtgcttggtaattccacctgtggtaggagtacttatacttgttttctgtggaattggtatcacttacagaagaaaaaagaactgtcaaaaatcagatgaagaggacatgcatcctaaagaatttgaacttcgttcaatgtcgatttttgaaggaaaattgttgtatgaagaaattgtaaaaggaactgaggattttgatgatgcttattgcattgggaagggaggcactggaaccgtttacaaggcaaagcttccatctaatgacttggtggctgtaaagaaactccacagtactcactgtgatggtgagaggagctttgaaaaggagttcttaaacgaggtgatggcattgactgggatacgccacagaaacatagtgaaactttatggcttctgttcacattcacgacactcatttttggtttatgagtaccttgaaaggggcagcttgttctcaatcttgtgcaatgaagaagcagccaaggaattggattggagcaagagggtgaatatcatcaaaggtgtggctcatggtttatcatacatgcactctgatgtatcgccaccaattgttcatcgagacataaccagcaagaacattttgctagatgccaagtatgaggcttgcatttcggactttggcactgctaagctgctagaactcggtgcatctaactggaccgctgtggtaggcacattcggatatgttgcaccagagcttgcttatacattgaaggtgactgagaaatgtgatgtgtacagctttggagtattggcactcgaagtgatgaatgggaagtacccaagtgatctaatcaggtctttgttgtcacaagctgaaattagagaaggaaatttgcctgaagatgtgtgggatgaccggcttgaacctcccacgagtaaaattcttgaagaacttgttagtgttttaatgctagcagtagcatgcttacatccaaatccacagtttaggcctaccatgtttgacgtttctcaggttataacaatgcacatcgatctctcagacagacttggactaatacaaggctcaatctgtgtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1003

Amino Acids

110.32

Weight (kDa)

6.11

Isoelectric Point (pI)

36.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2951
Acc65I GGTACC 1 cut(s) 359
AccB1I GGYRCC 1 cut(s) 359
AccII CGCG 1 cut(s) 918
AccIII TCCGGA 1 cut(s) 799
AciI CCGC 3 cut(s) 916, 1255, 2631
AclWI GGATC 3 cut(s) 16, 574, 1468
AcsI RAATTY 8 cut(s) 296, 1048, 1214, 1227, 1263, 2069, 2803, 2853
AcuI CTGAAG 2 cut(s) 72, 2832
AfiI CCNNNNNNNGG 5 cut(s) 733, 799, 1313, 1973, 2389
AflII CTTAAG 1 cut(s) 601
AflIII ACRYGT 2 cut(s) 624, 636
AjiI CACGTC 1 cut(s) 876
AjnI CCWGG 1 cut(s) 1906
Alw21I GWGCWC 3 cut(s) 121, 181, 330
Alw26I GTCTC 6 cut(s) 728, 742, 828, 1076, 1254, 2523
AlwI GGATC 3 cut(s) 16, 574, 1468
AlwNI CAGNNNCTG 2 cut(s) 95, 440
Aor13HI TCCGGA 1 cut(s) 799
AoxI GGCC 2 cut(s) 790, 2921
ApeKI GCWGC 6 cut(s) 1277, 1566, 1615, 2394, 2426, 2602
ApoI RAATTY 8 cut(s) 296, 1048, 1214, 1227, 1263, 2069, 2803, 2853
Asp700I GAANNNNTTC 1 cut(s) 1142
Asp718I GGTACC 1 cut(s) 359
AspS9I GGNCC 3 cut(s) 791, 1799, 2628
AsuC2I CCSGG 2 cut(s) 728, 1308
AsuHPI GGTGA 8 cut(s) 241, 857, 1184, 1235, 2267, 2302, 2467, 2698
AsuNHI GCTAGC 1 cut(s) 2884
AvaII GGWCC 2 cut(s) 1799, 2628
BanI GGYRCC 1 cut(s) 359
BanII GRGCYC 2 cut(s) 121, 1893
BauI CACGAG 1 cut(s) 2845
BbsI GAAGAC 2 cut(s) 63, 134
Bbv12I GWGCWC 3 cut(s) 121, 181, 330
BbvI GCAGC 6 cut(s) 1289, 1578, 1627, 2406, 2438, 2589
BccI CCATC 5 cut(s) 123, 1127, 2212, 2246, 2287
BciT130I CCWGG 1 cut(s) 1908
BciVI GTATCC 1 cut(s) 2301
BcnI CCSGG 2 cut(s) 728, 1308
BcoDI GTCTC 6 cut(s) 728, 742, 828, 1076, 1254, 2523
BfmI CTRYAG 2 cut(s) 1836, 1878
BfrI CTTAAG 1 cut(s) 601
BfuI GTATCC 1 cut(s) 2301
BglII AGATCT 2 cut(s) 958, 1630
BisI GCNGC 7 cut(s) 1256, 1278, 1567, 1616, 2395, 2427, 2603
BlpI GCTNAGC 2 cut(s) 180, 2598
BlsI GCNGC 7 cut(s) 1257, 1279, 1568, 1617, 2396, 2428, 2604
BmcAI AGTACT 3 cut(s) 618, 1980, 2242
Bme1390I CCNGG 3 cut(s) 728, 1308, 1908
Bme18I GGWCC 2 cut(s) 1799, 2628
BmgBI CACGTC 1 cut(s) 876
BmgT120I GGNCC 3 cut(s) 791, 1799, 2628
BmiI GGNNCC 9 cut(s) 361, 649, 937, 1139, 1297, 1535, 1588, 1800, 2182
BmrFI CCNGG 3 cut(s) 728, 1308, 1908
BmrI ACTGGG 1 cut(s) 2313
BmsI GCATC 5 cut(s) 686, 2068, 2140, 2548, 2627
BmtI GCTAGC 1 cut(s) 2888
BmuI ACTGGG 1 cut(s) 2313
BpiI GAAGAC 2 cut(s) 63, 134
BplI GAGNNNNNCTC 4 cut(s) 108, 140, 1382, 1414
BpmI CTGGAG 1 cut(s) 680
Bpu10I CCTNAGC 1 cut(s) 458
Bpu1102I GCTNAGC 2 cut(s) 180, 2598
BpuEI CTTGAG 8 cut(s) 344, 930, 1117, 1289, 1434, 1496, 1525, 1582
BpuMI CCSGG 2 cut(s) 728, 1308
Bsa29I ATCGAT 2 cut(s) 1789, 2964
BsaJI CCNNGG 3 cut(s) 1307, 1582, 2430
BsaWI WCCGGW 2 cut(s) 413, 799
BsaXI ACNNNNNCTCC 2 cut(s) 1888, 1918
Bsc4I CCNNNNNNNGG 5 cut(s) 733, 799, 1313, 1973, 2389
Bse118I RCCGGY 1 cut(s) 2829
Bse1I ACTGG 9 cut(s) 138, 663, 768, 1009, 1153, 1510, 2182, 2308, 2630
Bse3DI GCAATG 3 cut(s) 1844, 1879, 2422
BseAI TCCGGA 1 cut(s) 799
BseBI CCWGG 1 cut(s) 1908
BseCI ATCGAT 2 cut(s) 1789, 2964
BseDI CCNNGG 3 cut(s) 1307, 1582, 2430
BseGI GGATG 4 cut(s) 1545, 2059, 2830, 2902
BseLI CCNNNNNNNGG 5 cut(s) 733, 799, 1313, 1973, 2389
BseMI GCAATG 3 cut(s) 1844, 1879, 2422
BseNI ACTGG 9 cut(s) 138, 663, 768, 1009, 1153, 1510, 2182, 2308, 2630
BseRI GAGGAG 2 cut(s) 298, 2275
BseXI GCAGC 6 cut(s) 1289, 1578, 1627, 2406, 2438, 2589
BsgI GTGCAG 2 cut(s) 1090, 1879
Bsh1236I CGCG 1 cut(s) 918
BshFI GGCC 2 cut(s) 792, 2923
BshNI GGYRCC 1 cut(s) 359
BshVI ATCGAT 2 cut(s) 1789, 2964
BsiHKAI GWGCWC 3 cut(s) 121, 181, 330
BsiSI CCGG 5 cut(s) 414, 728, 800, 1307, 2830
BslFI GGGAC 2 cut(s) 1381, 1693
BslI CCNNNNNNNGG 5 cut(s) 733, 799, 1313, 1973, 2389
BsmAI GTCTC 6 cut(s) 728, 742, 828, 1076, 1254, 2523
BsmBI CGTCTC 1 cut(s) 1076
BsmFI GGGAC 2 cut(s) 1381, 1693
BsmI GAATGC 1 cut(s) 1089
BsnI GGCC 2 cut(s) 792, 2923
Bsp1286I GDGCHC 4 cut(s) 121, 181, 330, 1893
Bsp13I TCCGGA 1 cut(s) 799
Bsp1407I TGTACA 1 cut(s) 2706
Bsp143I GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
Bsp1720I GCTNAGC 2 cut(s) 180, 2598
BspACI CCGC 3 cut(s) 916, 1255, 2631
BspANI GGCC 2 cut(s) 792, 2923
BspDI ATCGAT 2 cut(s) 1789, 2964
BspEI TCCGGA 1 cut(s) 799
BspFNI CGCG 1 cut(s) 918
BspLI GGNNCC 9 cut(s) 361, 649, 937, 1139, 1297, 1535, 1588, 1800, 2182
BspOI GCTAGC 1 cut(s) 2888
BspPI GGATC 3 cut(s) 16, 574, 1468
BspQI GCTCTTC 1 cut(s) 126
BspT107I GGYRCC 1 cut(s) 359
BspTI CTTAAG 1 cut(s) 601
BsrDI GCAATG 3 cut(s) 1844, 1879, 2422
BsrFI RCCGGY 1 cut(s) 2829
BsrGI TGTACA 1 cut(s) 2706
BsrI ACTGG 9 cut(s) 138, 663, 768, 1009, 1153, 1510, 2182, 2308, 2630
BssAI RCCGGY 1 cut(s) 2829
BssECI CCNNGG 3 cut(s) 1307, 1582, 2430
BssMI GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
BssSI CACGAG 1 cut(s) 2845
BssT1I CCWWGG 2 cut(s) 1582, 2430
Bst2BI CACGAG 1 cut(s) 2845
Bst2UI CCWGG 1 cut(s) 1908
Bst4CI ACNGT 7 cut(s) 97, 771, 2033, 2185, 2240, 2249, 2916
Bst6I CTCTTC 2 cut(s) 126, 2043
BstAFI CTTAAG 1 cut(s) 601
BstAUI TGTACA 1 cut(s) 2706
BstC8I GCNNGC 5 cut(s) 1044, 2575, 2670, 2886, 2896
BstENI CCTNNNNNAGG 1 cut(s) 1971
BstF5I GGATG 4 cut(s) 1545, 2059, 2830, 2902
BstFNI CGCG 1 cut(s) 918
BstKTI GATC 9 cut(s) 11, 337, 582, 745, 961, 1463, 1633, 2761, 2968
BstMAI GTCTC 6 cut(s) 728, 742, 828, 1076, 1254, 2523
BstMBI GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
BstMWI GCNNNNNNNGC 2 cut(s) 693, 1624
BstNI CCWGG 1 cut(s) 1908
BstNSI RCATGY 5 cut(s) 628, 640, 2059, 2497, 2898
BstSCI CCNGG 3 cut(s) 726, 1306, 1906
BstSFI CTRYAG 2 cut(s) 1836, 1878
BstUI CGCG 1 cut(s) 918
BstV1I GCAGC 6 cut(s) 1289, 1578, 1627, 2406, 2438, 2589
BstV2I GAAGAC 2 cut(s) 63, 134
BstX2I RGATCY 3 cut(s) 579, 958, 1630
BstXI CCANNNNNNTGG 4 cut(s) 213, 658, 1148, 2437
BstYI RGATCY 3 cut(s) 579, 958, 1630
Bsu15I ATCGAT 2 cut(s) 1789, 2964
BsuI GTATCC 1 cut(s) 2301
BsuRI GGCC 2 cut(s) 792, 2923
BsuTUI ATCGAT 2 cut(s) 1789, 2964
BtrI CACGTC 1 cut(s) 876
BtsCI GGATG 4 cut(s) 1545, 2059, 2830, 2902
BtsI GCAGTG 2 cut(s) 234, 2592
BtsIMutI CAGTG 9 cut(s) 234, 656, 865, 1146, 1463, 1697, 2175, 2245, 2592
Cac8I GCNNGC 5 cut(s) 1044, 2575, 2670, 2886, 2896
CaiI CAGNNNCTG 2 cut(s) 95, 440
Cfr10I RCCGGY 1 cut(s) 2829
Cfr13I GGNCC 3 cut(s) 791, 1799, 2628
ClaI ATCGAT 2 cut(s) 1789, 2964
CspCI CAANNNNNGTGG 2 cut(s) 862, 897
DpnI GATC 9 cut(s) 10, 336, 581, 744, 960, 1462, 1632, 2760, 2967
DpnII GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
Eam1104I CTCTTC 2 cut(s) 126, 2043
EarI CTCTTC 2 cut(s) 126, 2043
Ecl136II GAGCTC 1 cut(s) 119
Eco130I CCWWGG 2 cut(s) 1582, 2430
Eco147I AGGCCT 1 cut(s) 2923
Eco24I GRGCYC 2 cut(s) 121, 1893
Eco47I GGWCC 2 cut(s) 1799, 2628
Eco53kI GAGCTC 1 cut(s) 119
Eco57I CTGAAG 2 cut(s) 72, 2832
EcoICRI GAGCTC 1 cut(s) 119
EcoNI CCTNNNNNAGG 1 cut(s) 1971
EcoRII CCWGG 1 cut(s) 1906
EcoT14I CCWWGG 2 cut(s) 1582, 2430
EcoT22I ATGCAT 1 cut(s) 2061
EcoT38I GRGCYC 2 cut(s) 121, 1893
ErhI CCWWGG 2 cut(s) 1582, 2430
Esp3I CGTCTC 1 cut(s) 1076
FalI AAGNNNNNCTT 6 cut(s) 126, 158, 273, 305, 2264, 2296
FaqI GGGAC 2 cut(s) 1381, 1693
Fnu4HI GCNGC 7 cut(s) 1256, 1278, 1567, 1616, 2395, 2427, 2603
FokI GGATG 4 cut(s) 1532, 2046, 2837, 2889
FriOI GRGCYC 2 cut(s) 121, 1893
Fsp4HI GCNGC 7 cut(s) 1256, 1278, 1567, 1616, 2395, 2427, 2603
GluI GCNGC 7 cut(s) 1256, 1278, 1567, 1616, 2395, 2427, 2603
GsuI CTGGAG 1 cut(s) 680
HaeIII GGCC 2 cut(s) 792, 2923
HapII CCGG 5 cut(s) 414, 728, 800, 1307, 2830
HincII GTYRAC 3 cut(s) 1395, 1695, 1774
HindII GTYRAC 3 cut(s) 1395, 1695, 1774
HindIII AAGCTT 5 cut(s) 814, 1093, 1409, 1687, 2198
HpaII CCGG 5 cut(s) 414, 728, 800, 1307, 2830
HphI GGTGA 8 cut(s) 241, 857, 1184, 1235, 2267, 2302, 2467, 2698
Hpy166II GTNNAC 8 cut(s) 278, 1395, 1543, 1695, 1774, 2188, 2348, 2707
Hpy8I GTNNAC 8 cut(s) 278, 1395, 1543, 1695, 1774, 2188, 2348, 2707
HpyAV CCTTC 7 cut(s) 322, 707, 1763, 2093, 2161, 2677, 2792
HpyCH4III ACNGT 7 cut(s) 97, 771, 2033, 2185, 2240, 2249, 2916
HpyCH4IV ACGT 2 cut(s) 875, 2937
HpyF10VI GCNNNNNNNGC 2 cut(s) 693, 1624
HpySE526I ACGT 2 cut(s) 875, 2937
Kpn2I TCCGGA 1 cut(s) 799
KpnI GGTACC 1 cut(s) 363
Kzo9I GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
LguI GCTCTTC 1 cut(s) 126
LmnI GCTCC 5 cut(s) 116, 544, 1837, 2262, 2445
Lsp1109I GCAGC 6 cut(s) 1289, 1578, 1627, 2406, 2438, 2589
LweI GCATC 5 cut(s) 686, 2068, 2140, 2548, 2627
MaeII ACGT 2 cut(s) 875, 2937
MaeIII GTNAC 7 cut(s) 247, 884, 897, 1205, 1937, 2686, 2778
MalI GATC 9 cut(s) 10, 336, 581, 744, 960, 1462, 1632, 2760, 2967
MboI GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
MfeI CAATTG 2 cut(s) 879, 2517
MflI RGATCY 3 cut(s) 579, 958, 1630
MhlI GDGCHC 4 cut(s) 121, 181, 330, 1893
MlyI GAGTC 4 cut(s) 1131, 1318, 1645, 1897
MmeI TCCRAC 1 cut(s) 94
Mph1103I ATGCAT 1 cut(s) 2061
MroI TCCGGA 1 cut(s) 799
MroXI GAANNNNTTC 1 cut(s) 1142
MseI TTAA 7 cut(s) 425, 602, 1341, 1577, 1596, 2282, 2879
MslI CAYNNNNRTG 2 cut(s) 2250, 2502
MspA1I CMGCKG 2 cut(s) 1618, 2633
MspCI CTTAAG 1 cut(s) 601
MspI CCGG 5 cut(s) 414, 728, 800, 1307, 2830
MspR9I CCNGG 3 cut(s) 728, 1308, 1908
MunI CAATTG 2 cut(s) 879, 2517
Mva1269I GAATGC 1 cut(s) 1089
MvaI CCWGG 1 cut(s) 1908
MvnI CGCG 1 cut(s) 918
MwoI GCNNNNNNNGC 2 cut(s) 693, 1624
NciI CCSGG 2 cut(s) 728, 1308
NdeII GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
NheI GCTAGC 1 cut(s) 2884
NlaIV GGNNCC 9 cut(s) 361, 649, 937, 1139, 1297, 1535, 1588, 1800, 2182
NmuCI GTSAC 4 cut(s) 247, 1205, 2686, 2778
NsiI ATGCAT 1 cut(s) 2061
NspI RCATGY 5 cut(s) 628, 640, 2059, 2497, 2898
PaeI GCATGC 1 cut(s) 2898
PceI AGGCCT 1 cut(s) 2923
PciI ACATGT 2 cut(s) 624, 636
PciSI GCTCTTC 1 cut(s) 126
PctI GAATGC 1 cut(s) 1089
PdmI GAANNNNTTC 1 cut(s) 1142
PfoI TCCNGGA 1 cut(s) 726
PkrI GCNGC 7 cut(s) 1257, 1279, 1568, 1617, 2396, 2428, 2604
PleI GAGTC 4 cut(s) 1130, 1318, 1644, 1897
PpsI GAGTC 4 cut(s) 1130, 1318, 1644, 1897
PscI ACATGT 2 cut(s) 624, 636
PsiI TTATAA 1 cut(s) 2951
Psp124BI GAGCTC 1 cut(s) 121
Psp6I CCWGG 1 cut(s) 1906
PspGI CCWGG 1 cut(s) 1906
PspN4I GGNNCC 9 cut(s) 361, 649, 937, 1139, 1297, 1535, 1588, 1800, 2182
PspPI GGNCC 3 cut(s) 791, 1799, 2628
PsrI GAACNNNNNNTAC 2 cut(s) 1922, 1954
PstNI CAGNNNCTG 2 cut(s) 95, 440
PsuI RGATCY 3 cut(s) 579, 958, 1630
PvuII CAGCTG 1 cut(s) 1618
RseI CAYNNNNRTG 2 cut(s) 2250, 2502
SacI GAGCTC 1 cut(s) 121
SapI GCTCTTC 1 cut(s) 126
SaqAI TTAA 7 cut(s) 425, 602, 1341, 1577, 1596, 2282, 2879
SatI GCNGC 7 cut(s) 1256, 1278, 1567, 1616, 2395, 2427, 2603
Sau3AI GATC 9 cut(s) 8, 334, 579, 742, 958, 1460, 1630, 2758, 2965
Sau96I GGNCC 3 cut(s) 791, 1799, 2628
ScaI AGTACT 3 cut(s) 618, 1980, 2242
SchI GAGTC 4 cut(s) 1131, 1318, 1645, 1897
ScrFI CCNGG 3 cut(s) 728, 1308, 1908
SduI GDGCHC 4 cut(s) 121, 181, 330, 1893
SfaNI GCATC 5 cut(s) 686, 2068, 2140, 2548, 2627
SfcI CTRYAG 2 cut(s) 1836, 1878
SinI GGWCC 2 cut(s) 1799, 2628
SmiMI CAYNNNNRTG 2 cut(s) 2250, 2502
SmlI CTYRAG 9 cut(s) 323, 601, 945, 1096, 1268, 1449, 1475, 1504, 1561
SmoI CTYRAG 9 cut(s) 323, 601, 945, 1096, 1268, 1449, 1475, 1504, 1561
SphI GCATGC 1 cut(s) 2898
SseBI AGGCCT 1 cut(s) 2923
SsiI CCGC 3 cut(s) 916, 1255, 2631
SspI AATATT 1 cut(s) 808
SstI GAGCTC 1 cut(s) 121
StuI AGGCCT 1 cut(s) 2923
StyD4I CCNGG 3 cut(s) 726, 1306, 1906
StyI CCWWGG 2 cut(s) 1582, 2430
TaaI ACNGT 7 cut(s) 97, 771, 2033, 2185, 2240, 2249, 2916
TaiI ACGT 2 cut(s) 878, 2940
TaqI TCGA 8 cut(s) 1081, 1514, 1789, 1928, 2090, 2527, 2730, 2964
TatI WGTACW 4 cut(s) 616, 1978, 2240, 2706
TauI GCSGC 1 cut(s) 1258
Tru1I TTAA 7 cut(s) 425, 602, 1341, 1577, 1596, 2282, 2879
Tru9I TTAA 7 cut(s) 425, 602, 1341, 1577, 1596, 2282, 2879
TscAI CASTG 9 cut(s) 241, 663, 865, 1153, 1470, 1704, 2182, 2252, 2599
TseFI GTSAC 4 cut(s) 247, 1205, 2686, 2778
TseI GCWGC 6 cut(s) 1277, 1566, 1615, 2394, 2426, 2602
Tsp45I GTSAC 4 cut(s) 247, 1205, 2686, 2778
TspGWI ACGGA 2 cut(s) 1115, 1682
TspRI CASTG 9 cut(s) 241, 663, 865, 1153, 1470, 1704, 2182, 2252, 2599
Vha464I CTTAAG 1 cut(s) 601
VpaK11BI GGWCC 2 cut(s) 1799, 2628
XagI CCTNNNNNAGG 1 cut(s) 1971
XapI RAATTY 8 cut(s) 296, 1048, 1214, 1227, 1263, 2069, 2803, 2853
XbaI TCTAGA 1 cut(s) 1885
XceI RCATGY 5 cut(s) 628, 640, 2059, 2497, 2898
XmnI GAANNNNTTC 1 cut(s) 1142
ZrmI AGTACT 3 cut(s) 618, 1980, 2242
Zsp2I ATGCAT 1 cut(s) 2061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.