Prupe.1G515300_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
42385641 .. 42389390
3750 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G515300.1

Sequence Viewer

Length: 3261 bp
ATGACATCTTTAAGTTCCGGTAAACTATGCTTCCTGCCTTATTGCCTGGTCATCTTCATGTATGTTTCATCACCAAATTGGGTTGCTTTTCCTTCTGCTACTTCTACTTCTGATACTGAAGCAAAGGCTCTTCTCAAATGGAAAGCCAGCTTATTTCCAAATAAAGCCCTCAATCATCTCACCTGGTACCCTCCCACTCATAATATTAATGCCACCAATTCTTCCAACACCAATCCAAAACCAAGAACAAGCCCATGCACTTGGACTGGTGTTTCATGCAACTCAGCTGGAAGTGTCAGCACGATAAACCTTTCCACTTGTGGTATTCAAGGTACGCTACATGAGTTTTCATTCTTGTCCTTCCCTAATCTTAAATATCTTGACCTCAGCTTCAACAAACTCTTTGATGCCATACCACCTCAAATCAGCTACCTCTCCAAACTCCACTATCTCGATATCTCTATAAATAAGTTGTCTAGGAGAATCCCACCAGAAATCAGTCTCTTGAGAAATCTTACATATCTTGGTCTCTTTAAAAATACTTTGTTGGGGGAAATTCCTAATGAGATAGGCAACCTGAAACCTCTTGTGGGGCTATATTTGCAAAAGAATCAACTCCATGGTTCAATTCCAAGATCACTAGGCAATCTAACAAGCCTTACCCATCTCTATCTCTATGATAATAAACTTTCTGGTTTGATTCCCAAGGAGATAGGGAACTTGAAATCTCTAGTAATTCTAGATTTGTCAACTAACAATTTAAGTGGTCTCATCCCTCCAAATTTGGAGATAGGGAACTTGAAATCTCTTATAGATCTAGAGTTGTCTTACAACAATTTAAGTGGTCTCATCCCTCCAAATATTGGTAACTTAATAAAGCTAAACACTTTGTACTTGCATTCCAATCAACTCTCTGGTTTGATTCCCAAGGAGATAGGGAACTTGAAATCTCTTGTAGATCTAGAGTTGTCCTACAACAATTTAAATGGTCTCATCCCTCCAAATATTGGTAACTTAATAAAGCTAAACACTTTGTACTTGCATTCCAATCAACTTTCTGGTTTGATTCCCAAGGAGATAGGGAACTTGAAATCTCTTGTAGATCTGGAGTTGTCCCTGAACAATTTAAGTGGTCTCATCCCTCCAAATATTGGTAACTTAATAAAGCTAAACACTTTGTACTTGCATTCCAATCAACTTTCTGGTTTGATTCCCAAGGAGATAGGGAACTTGAAATCTCTTGTAGATCTAGAGTTGGGTGAGAATCAACTCAACGATTCGATTCCAGCCTCATTTGCTAACTTGAGCAACTTGGATATCTTAATCCTACGCAATAACCAACTTTCCGGCTCCATCCCCCAAGAGTTAGAGAATCTCAAGAATTTGACTAAATTGTACTTGGATACAAACCAATTGTCTGGTTATTTGCCCCAAAATATCTGCTTAGGTGGAAAACTCACAAAATTGTCAGTAGGTACAAACTATTTGACTGGTCCAATCCCCAAAAGCTTGAAAAATTGCACGGGCTTAGTGAGAGTCCATCTTGACCAAAACCAATTGACGGGCAACATATCTGAAGACTTCGTTGGGTTGATCCCAAAAGAATTCGGGAGACTGACTTCTTTGGAGAGGTTGATGTTGAATGGAAATCAACTTTCAGGTCGTATACCGTTAGAATTCGGATCATTGAATGATCTTGAATATCTTGACTTGTCAACAAACAAATTCAATGAGTCAATTCCGAGCATTCTAGGTGACTTGTTGAAATTGCACTACTTGAATTTGAGCAACAACAAGTTGGCTCAAGCAATTCCATTTAAGTTGAAGAAGTTAGTTCAATTGAATTACATGGATTTAAGTCATAACTCTCTTGAAGGTAAGATACCATCAGAATTGGGCAGTATGCAGAGTTTGGTGACACTTGATCTTTCCCACAACAATCTTTCGGGTTCCATACCATCAAGTTTTGAAGAGATGCACGGCTTGTCGTACGTTGACATATCCTACAATCACTTGGAAGGTCCCCTTCCCAACATCAGTGCATTTCGAGAAGCTCCGCCAGAAAGATTGAAAGGGAACAAAGGATTGTGTGGCAAAGTTGGAGCTCTGCTACCACCCTGCAATGCGCATGGATCAAAAAAGGATCACAAGGTCTTATTCTCTGTTGCAGTGTTTGTACTTCTATCTACTCTCTTTACAATTGTCTTTGTAATAATGCAAACAAAGAAGAAGCATCAAGATACTAAACAAAACCACATGCATGGAGAAATTTCTTTTTCAGTTTTAAATTTTGATGGAAAATCAATGTATAAGGAAATTATAAGGGCAACAGAAGATTTTGATTCCACATATTGCATTGGGAAGGGAGGACATGGAAGCATCTATAAAGTAAATTTGTCATCTGGAGACGTAGTGGTCGTGAAGAGACTCCATCTGCTATGGGATGGCGATACAGAATTTCAAAAGGGGTTCTTGAATGAAGAAAGGGCACTCACTGAGATAAGACATTGGAATATTGTGAAGCTCTATGGTTTCTGCGCAAATAAACAACACTCGTTTTTGGTGTATGAGTATCTTGAAAGAGGTAGCTTGGCCGCAATGTTGAGCAAAGATGAAGAAGCTAAAGAGTTGGGGTGGAGTAAAAGGGTGAATATTGTTAAAGGTTTAGCTCATGCCTTGTGTTACATGCACCACGATTGCTTGCCACCGATTGTACATCGTGACATCTCAAGTAAGAACATTTTGTTGGATTCTGAATATGAGGCATGTGTTTCAGACTTTGGCACAACTAAATTTTTAAATCCAGACTCAACTAATTGGACTGCCGCTGCAGGCACGTATGGCTACATGGCACCAGAGCTTGCTTACACAATGGAAGTGAATGAGAACTGCGATGTTTATAGCTTTGGTGTGGTCACATTGGAAATAATTATGGGAAAGCATCCTGGAGATCTTCTCTCATCTTTCTCACCAGTCTCTTCATCCTCCTCCTCCTCCTCATCATCATCTGCATTACCAGCCCATCAAATAACAATTGTGGATGTTTTGGACCAACGCATTTCCCCTCCTACACATCAACTTGCAAGCGAAGTGGTCTCTCTTGTGAAGATAGCATTTTCATGCTTGAATTCCAGCCCAAAATCTCGTCCAACAATGAAACAAGTTTCTCATTTCCTCTCAACTCAGATGCTGCATTTGTCGAAGACGGTACATATGATGACATGTGGTGAATTGCTTGCTCTTGATCCTTTGGCTACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1087

Amino Acids

119.7

Weight (kDa)

7.39

Isoelectric Point (pI)

32.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2321
AasI GACNNNNNNGTC 1 cut(s) 2414
Acc16I TGCGCA 2 cut(s) 2127, 2539
Acc65I GGTACC 1 cut(s) 186
AccB1I GGYRCC 2 cut(s) 186, 2851
AccB7I CCANNNNNTGG 3 cut(s) 863, 1007, 1151
AccI GTMKAC 1 cut(s) 1666
AciI CCGC 3 cut(s) 2057, 2595, 2826
AclWI GGATC 5 cut(s) 1588, 1690, 2140, 2151, 3239
AcoI YGGCCR 1 cut(s) 2592
AcuI CTGAAG 2 cut(s) 138, 1596
AfiI CCNNNNNNNGG 5 cut(s) 590, 863, 1007, 1151, 1561
AflIII ACRYGT 1 cut(s) 3221
AjnI CCWGG 3 cut(s) 45, 182, 2944
AjuI GAANNNNNNNTTGG 4 cut(s) 1569, 1601, 2729, 2761
Alw21I GWGCWC 1 cut(s) 2107
AlwI GGATC 5 cut(s) 1588, 1690, 2140, 2151, 3239
AlwNI CAGNNNCTG 1 cut(s) 3190
AoxI GGCC 1 cut(s) 2592
ApeKI GCWGC 2 cut(s) 2828, 3190
ArsI GACNNNNNNTTYG 2 cut(s) 1400, 1432
AseI ATTAAT 1 cut(s) 207
Asp718I GGTACC 1 cut(s) 186
AspLEI GCGC 2 cut(s) 2128, 2540
AspS9I GGNCC 3 cut(s) 1493, 2021, 3049
AsuHPI GGTGA 8 cut(s) 63, 172, 1271, 1766, 1927, 2659, 2961, 3239
AvaII GGWCC 3 cut(s) 1493, 2021, 3049
BaeGI GKGCMC 1 cut(s) 2491
BanI GGYRCC 2 cut(s) 186, 2851
BanII GRGCYC 1 cut(s) 2107
BarI GAAGNNNNNNTAC 2 cut(s) 1866, 1898
BbsI GAAGAC 2 cut(s) 1584, 3209
Bbv12I GWGCWC 1 cut(s) 2107
BbvCI CCTCAGC 1 cut(s) 386
BbvI GCAGC 2 cut(s) 2815, 3177
BccI CCATC 9 cut(s) 672, 1361, 1548, 1894, 1966, 2288, 2438, 2439, 3030
BceAI ACGGC 1 cut(s) 1996
BciT130I CCWGG 3 cut(s) 47, 184, 2946
BciVI GTATCC 1 cut(s) 1396
BfaI CTAG 8 cut(s) 477, 641, 731, 740, 818, 962, 1250, 1751
BfmI CTRYAG 1 cut(s) 2829
BfuI GTATCC 1 cut(s) 1396
BglII AGATCT 5 cut(s) 814, 958, 1102, 1246, 2950
BisI GCNGC 4 cut(s) 2595, 2826, 2829, 3191
BlsI GCNGC 4 cut(s) 2596, 2827, 2830, 3192
Bme1390I CCNGG 3 cut(s) 47, 184, 2946
Bme18I GGWCC 3 cut(s) 1493, 2021, 3049
BmgT120I GGNCC 3 cut(s) 1493, 2021, 3049
BmiI GGNNCC 5 cut(s) 188, 1351, 1951, 2023, 2853
BmrFI CCNGG 3 cut(s) 47, 184, 2946
BmsI GCATC 6 cut(s) 397, 1965, 2242, 2388, 2950, 3177
BpiI GAAGAC 2 cut(s) 1584, 3209
BplI GAGNNNNNCTC 2 cut(s) 2940, 2972
BpmI CTGGAG 3 cut(s) 1127, 2424, 2967
Bpu10I CCTNAGC 2 cut(s) 386, 1444
BpuEI CTTGAG 5 cut(s) 526, 1324, 1361, 1788, 2713
BsaAI YACGTR 1 cut(s) 2838
BsaI GGTCTC 6 cut(s) 533, 773, 851, 995, 1139, 3100
BsaJI CCNNGG 5 cut(s) 619, 705, 927, 1071, 1215
BsaWI WCCGGW 1 cut(s) 17
BsaXI ACNNNNNCTCC 2 cut(s) 2397, 2427
Bsc4I CCNNNNNNNGG 5 cut(s) 590, 863, 1007, 1151, 1561
Bse1I ACTGG 3 cut(s) 271, 1495, 2972
Bse3DI GCAATG 2 cut(s) 2128, 2604
BseBI CCWGG 3 cut(s) 47, 184, 2946
BseDI CCNNGG 5 cut(s) 619, 705, 927, 1071, 1215
BseGI GGATG 9 cut(s) 771, 849, 993, 1137, 1353, 2449, 2941, 2981, 3046
BseLI CCNNNNNNNGG 5 cut(s) 590, 863, 1007, 1151, 1561
BseMI GCAATG 2 cut(s) 2128, 2604
BseMII CTCAG 4 cut(s) 297, 400, 2487, 3197
BseNI ACTGG 3 cut(s) 271, 1495, 2972
BseRI GAGGAG 4 cut(s) 2977, 2980, 2983, 2986
BseSI GKGCMC 1 cut(s) 2491
BseXI GCAGC 2 cut(s) 2815, 3177
BshFI GGCC 1 cut(s) 2594
BshNI GGYRCC 2 cut(s) 186, 2851
BsiHKAI GWGCWC 1 cut(s) 2107
BsiSI CCGG 2 cut(s) 18, 1347
BsiWI CGTACG 1 cut(s) 1989
BslFI GGGAC 2 cut(s) 1099, 2007
BslI CCNNNNNNNGG 5 cut(s) 590, 863, 1007, 1151, 1561
BsmBI CGTCTC 1 cut(s) 2400
BsmFI GGGAC 2 cut(s) 1099, 2007
BsmI GAATGC 4 cut(s) 898, 1042, 1186, 1746
BsnI GGCC 1 cut(s) 2594
Bso31I GGTCTC 6 cut(s) 533, 773, 851, 995, 1139, 3100
Bsp1286I GDGCHC 2 cut(s) 2107, 2491
Bsp1407I TGTACA 1 cut(s) 2713
Bsp19I CCATGG 1 cut(s) 619
BspACI CCGC 3 cut(s) 2057, 2595, 2826
BspANI GGCC 1 cut(s) 2594
BspCNI CTCAG 4 cut(s) 296, 399, 2488, 3196
BspLI GGNNCC 5 cut(s) 188, 1351, 1951, 2023, 2853
BspMAI CTGCAG 1 cut(s) 2833
BspPI GGATC 5 cut(s) 1588, 1690, 2140, 2151, 3239
BspQI GCTCTTC 1 cut(s) 135
BspT107I GGYRCC 2 cut(s) 186, 2851
BspTNI GGTCTC 6 cut(s) 533, 773, 851, 995, 1139, 3100
BsrDI GCAATG 2 cut(s) 2128, 2604
BsrGI TGTACA 1 cut(s) 2713
BsrI ACTGG 3 cut(s) 271, 1495, 2972
BssECI CCNNGG 5 cut(s) 619, 705, 927, 1071, 1215
BssNAI GTATAC 1 cut(s) 1667
BssT1I CCWWGG 5 cut(s) 619, 705, 927, 1071, 1215
Bst1107I GTATAC 1 cut(s) 1667
Bst2UI CCWGG 3 cut(s) 47, 184, 2946
Bst4CI ACNGT 2 cut(s) 1671, 3208
Bst6I CTCTTC 4 cut(s) 135, 1965, 2417, 2983
BstAUI TGTACA 1 cut(s) 2713
BstBAI YACGTR 1 cut(s) 2838
BstC8I GCNNGC 6 cut(s) 148, 2702, 2833, 2862, 3085, 3237
BstDEI CTNAG 6 cut(s) 283, 386, 1444, 1528, 2496, 3183
BstDSI CCRYGG 1 cut(s) 619
BstF5I GGATG 9 cut(s) 771, 849, 993, 1137, 1353, 2449, 2941, 2981, 3046
BstHHI GCGC 2 cut(s) 2128, 2540
BstMWI GCNNNNNNNGC 4 cut(s) 601, 1295, 2841, 3017
BstNI CCWGG 3 cut(s) 47, 184, 2946
BstNSI RCATGY 4 cut(s) 2260, 2689, 2769, 3225
BstSCI CCNGG 3 cut(s) 45, 182, 2944
BstSFI CTRYAG 1 cut(s) 2829
BstSLI GKGCMC 1 cut(s) 2491
BstV1I GCAGC 2 cut(s) 2815, 3177
BstV2I GAAGAC 2 cut(s) 1584, 3209
BstX2I RGATCY 5 cut(s) 814, 958, 1102, 1246, 2950
BstXI CCANNNNNNTGG 3 cut(s) 261, 1418, 2261
BstYI RGATCY 5 cut(s) 814, 958, 1102, 1246, 2950
BstZ17I GTATAC 1 cut(s) 1667
BsuI GTATCC 1 cut(s) 1396
BsuRI GGCC 1 cut(s) 2594
BtgI CCRYGG 1 cut(s) 619
BtgZI GCGATG 1 cut(s) 2907
BtsCI GGATG 9 cut(s) 771, 849, 993, 1137, 1353, 2449, 2941, 2981, 3046
BtsI GCAGTG 1 cut(s) 2175
BtsIMutI CAGTG 3 cut(s) 2044, 2175, 2493
Cac8I GCNNGC 6 cut(s) 148, 2702, 2833, 2862, 3085, 3237
CaiI CAGNNNCTG 1 cut(s) 3190
CfoI GCGC 2 cut(s) 2128, 2540
Cfr13I GGNCC 3 cut(s) 1493, 2021, 3049
CsiI ACCWGGT 1 cut(s) 182
CspCI CAANNNNNGTGG 8 cut(s) 745, 780, 823, 858, 1111, 1146, 3072, 3107
DdeI CTNAG 6 cut(s) 283, 386, 1444, 1528, 2496, 3183
DraI TTTAAA 4 cut(s) 535, 984, 2286, 2799
DrdI GACNNNNNNGTC 1 cut(s) 2414
DseDI GACNNNNNNGTC 1 cut(s) 2414
EaeI YGGCCR 1 cut(s) 2592
Eam1104I CTCTTC 4 cut(s) 135, 1965, 2417, 2983
EarI CTCTTC 4 cut(s) 135, 1965, 2417, 2983
EciI GGCGGA 1 cut(s) 2046
Ecl136II GAGCTC 1 cut(s) 2105
Eco130I CCWWGG 5 cut(s) 619, 705, 927, 1071, 1215
Eco24I GRGCYC 1 cut(s) 2107
Eco31I GGTCTC 6 cut(s) 533, 773, 851, 995, 1139, 3100
Eco32I GATATC 2 cut(s) 457, 1318
Eco47I GGWCC 3 cut(s) 1493, 2021, 3049
Eco53kI GAGCTC 1 cut(s) 2105
Eco57I CTGAAG 2 cut(s) 138, 1596
EcoICRI GAGCTC 1 cut(s) 2105
EcoO109I RGGNCCY 1 cut(s) 2021
EcoRI GAATTC 3 cut(s) 1604, 1676, 3127
EcoRII CCWGG 3 cut(s) 45, 182, 2944
EcoRV GATATC 2 cut(s) 457, 1318
EcoT14I CCWWGG 5 cut(s) 619, 705, 927, 1071, 1215
EcoT22I ATGCAT 1 cut(s) 2262
EcoT38I GRGCYC 1 cut(s) 2107
ErhI CCWWGG 5 cut(s) 619, 705, 927, 1071, 1215
Esp3I CGTCTC 1 cut(s) 2400
FalI AAGNNNNNCTT 4 cut(s) 2010, 2042, 2456, 2488
FaqI GGGAC 2 cut(s) 1099, 2007
FauNDI CATATG 1 cut(s) 3213
FblI GTMKAC 1 cut(s) 1666
Fnu4HI GCNGC 4 cut(s) 2595, 2826, 2829, 3191
FokI GGATG 9 cut(s) 758, 836, 980, 1124, 1340, 2456, 2928, 2968, 3053
FriOI GRGCYC 1 cut(s) 2107
Fsp4HI GCNGC 4 cut(s) 2595, 2826, 2829, 3191
FspAI RTGCGCAY 1 cut(s) 2127
FspBI CTAG 8 cut(s) 477, 641, 731, 740, 818, 962, 1250, 1751
FspI TGCGCA 2 cut(s) 2127, 2539
GlaI GCGC 2 cut(s) 2127, 2539
GluI GCNGC 4 cut(s) 2595, 2826, 2829, 3191
GsuI CTGGAG 3 cut(s) 1127, 2424, 2967
HaeIII GGCC 1 cut(s) 2594
HapII CCGG 2 cut(s) 18, 1347
HhaI GCGC 2 cut(s) 2128, 2540
Hin6I GCGC 2 cut(s) 2126, 2538
HinP1I GCGC 2 cut(s) 2126, 2538
HincII GTYRAC 3 cut(s) 750, 1716, 1996
HindII GTYRAC 3 cut(s) 750, 1716, 1996
HindIII AAGCTT 1 cut(s) 1507
HpaII CCGG 2 cut(s) 18, 1347
HphI GGTGA 8 cut(s) 63, 172, 1271, 1766, 1927, 2659, 2961, 3239
Hpy166II GTNNAC 5 cut(s) 23, 750, 1667, 1716, 1996
Hpy188I TCNGA 8 cut(s) 112, 1576, 1682, 1743, 1891, 2755, 2776, 3186
Hpy8I GTNNAC 5 cut(s) 23, 750, 1667, 1716, 1996
HpyAV CCTTC 6 cut(s) 102, 370, 1868, 2012, 2036, 2356
HpyCH4III ACNGT 2 cut(s) 1671, 3208
HpyCH4IV ACGT 3 cut(s) 1992, 2409, 2837
HpyF10VI GCNNNNNNNGC 4 cut(s) 601, 1295, 2841, 3017
HpyF3I CTNAG 6 cut(s) 283, 386, 1444, 1528, 2496, 3183
HpySE526I ACGT 3 cut(s) 1992, 2409, 2837
HspAI GCGC 2 cut(s) 2126, 2538
KpnI GGTACC 1 cut(s) 190
LguI GCTCTTC 1 cut(s) 135
LmnI GCTCC 3 cut(s) 1355, 2059, 2102
Lsp1109I GCAGC 2 cut(s) 2815, 3177
LweI GCATC 6 cut(s) 397, 1965, 2242, 2388, 2950, 3177
MabI ACCWGGT 1 cut(s) 182
MaeI CTAG 8 cut(s) 477, 641, 731, 740, 818, 962, 1250, 1751
MaeII ACGT 3 cut(s) 1992, 2409, 2837
MaeIII GTNAC 8 cut(s) 866, 1010, 1154, 1754, 1915, 2681, 2720, 2914
MfeI CAATTG 5 cut(s) 1412, 1556, 1838, 2199, 3033
MflI RGATCY 5 cut(s) 814, 958, 1102, 1246, 2950
MhlI GDGCHC 2 cut(s) 2107, 2491
MlyI GAGTC 4 cut(s) 1545, 1742, 2421, 2801
MmeI TCCRAC 4 cut(s) 249, 2080, 2727, 3173
Mph1103I ATGCAT 1 cut(s) 2262
MslI CAYNNNNRTG 3 cut(s) 56, 2259, 3118
MspA1I CMGCKG 2 cut(s) 287, 2828
MspI CCGG 2 cut(s) 18, 1347
MspR9I CCNGG 3 cut(s) 47, 184, 2946
MunI CAATTG 5 cut(s) 1412, 1556, 1838, 2199, 3033
Mva1269I GAATGC 4 cut(s) 898, 1042, 1186, 1746
MvaI CCWGG 3 cut(s) 47, 184, 2946
MwoI GCNNNNNNNGC 4 cut(s) 601, 1295, 2841, 3017
NcoI CCATGG 1 cut(s) 619
NdeI CATATG 1 cut(s) 3213
NlaIV GGNNCC 5 cut(s) 188, 1351, 1951, 2023, 2853
NmuCI GTSAC 4 cut(s) 1754, 1915, 2720, 2914
NsbI TGCGCA 2 cut(s) 2127, 2539
NsiI ATGCAT 1 cut(s) 2262
NspI RCATGY 4 cut(s) 2260, 2689, 2769, 3225
PciI ACATGT 1 cut(s) 3221
PciSI GCTCTTC 1 cut(s) 135
PcsI WCGNNNNNNNCGW 1 cut(s) 2415
PctI GAATGC 4 cut(s) 898, 1042, 1186, 1746
Pfl23II CGTACG 1 cut(s) 1989
PflMI CCANNNNNTGG 3 cut(s) 863, 1007, 1151
PfoI TCCNGGA 1 cut(s) 2944
PkrI GCNGC 4 cut(s) 2596, 2827, 2830, 3192
PleI GAGTC 4 cut(s) 1544, 1741, 2421, 2801
PpsI GAGTC 4 cut(s) 1544, 1741, 2421, 2801
Ppu21I YACGTR 1 cut(s) 2838
PpuMI RGGWCCY 1 cut(s) 2021
PscI ACATGT 1 cut(s) 3221
PshBI ATTAAT 1 cut(s) 207
PsiI TTATAA 1 cut(s) 2321
Psp124BI GAGCTC 1 cut(s) 2107
Psp5II RGGWCCY 1 cut(s) 2021
Psp6I CCWGG 3 cut(s) 45, 182, 2944
PspGI CCWGG 3 cut(s) 45, 182, 2944
PspLI CGTACG 1 cut(s) 1989
PspN4I GGNNCC 5 cut(s) 188, 1351, 1951, 2023, 2853
PspPI GGNCC 3 cut(s) 1493, 2021, 3049
PspPPI RGGWCCY 1 cut(s) 2021
PstI CTGCAG 1 cut(s) 2833
PstNI CAGNNNCTG 1 cut(s) 3190
PsuI RGATCY 5 cut(s) 814, 958, 1102, 1246, 2950
PvuII CAGCTG 1 cut(s) 287
RseI CAYNNNNRTG 3 cut(s) 56, 2259, 3118
SacI GAGCTC 1 cut(s) 2107
SapI GCTCTTC 1 cut(s) 135
SatI GCNGC 4 cut(s) 2595, 2826, 2829, 3191
Sau96I GGNCC 3 cut(s) 1493, 2021, 3049
SchI GAGTC 4 cut(s) 1545, 1742, 2421, 2801
ScrFI CCNGG 3 cut(s) 47, 184, 2946
SduI GDGCHC 2 cut(s) 2107, 2491
SexAI ACCWGGT 1 cut(s) 182
SfaNI GCATC 6 cut(s) 397, 1965, 2242, 2388, 2950, 3177
SfcI CTRYAG 1 cut(s) 2829
SinI GGWCC 3 cut(s) 1493, 2021, 3049
SmiI ATTTAAAT 1 cut(s) 984
SmiMI CAYNNNNRTG 3 cut(s) 56, 2259, 3118
SmlI CTYRAG 5 cut(s) 505, 1303, 1376, 1803, 2728
SmoI CTYRAG 5 cut(s) 505, 1303, 1376, 1803, 2728
SsiI CCGC 3 cut(s) 2057, 2595, 2826
SspI AATATT 6 cut(s) 205, 862, 1006, 1150, 2515, 2653
SspMI CTAG 8 cut(s) 477, 641, 731, 740, 818, 962, 1250, 1751
SstI GAGCTC 1 cut(s) 2107
StyD4I CCNGG 3 cut(s) 45, 182, 2944
StyI CCWWGG 5 cut(s) 619, 705, 927, 1071, 1215
SwaI ATTTAAAT 1 cut(s) 984
TaaI ACNGT 2 cut(s) 1671, 3208
TaiI ACGT 3 cut(s) 1995, 2412, 2840
TaqI TCGA 4 cut(s) 453, 1280, 2047, 3200
TatI WGTACW 6 cut(s) 891, 1035, 1179, 1395, 2176, 2713
TauI GCSGC 2 cut(s) 2597, 2828
TscAI CASTG 3 cut(s) 2044, 2175, 2500
TseFI GTSAC 4 cut(s) 1754, 1915, 2720, 2914
TseI GCWGC 2 cut(s) 2828, 3190
Tsp45I GTSAC 4 cut(s) 1754, 1915, 2720, 2914
TspDTI ATGAA 9 cut(s) 46, 57, 264, 339, 2493, 2628, 2970, 3108, 3170
TspRI CASTG 3 cut(s) 2044, 2175, 2500
Van91I CCANNNNNTGG 3 cut(s) 863, 1007, 1151
VpaK11BI GGWCC 3 cut(s) 1493, 2021, 3049
VspI ATTAAT 1 cut(s) 207
XbaI TCTAGA 4 cut(s) 739, 817, 961, 1249
XceI RCATGY 4 cut(s) 2260, 2689, 2769, 3225
XmiI GTMKAC 1 cut(s) 1666
XspI CTAG 8 cut(s) 477, 641, 731, 740, 818, 962, 1250, 1751
Zsp2I ATGCAT 1 cut(s) 2262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.