Rw5G015020

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
18098459 .. 18102208
3750 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G015020.1

Sequence Viewer

Length: 3675 bp
ATGAGATCATTTCTGGCTTACCTTCTTTTGTATGTTCAGCTGGTTTCATCACCAAACAATGCTTTTGCTTCTGCTAATTTTAGTTCCAGTTCTAGTGAAGCGGAGGCTCTTCTCAAATGGAAAGCCAGCTTTCTAAACCAAACCCAGAATCATAATCTGACCTCCTGGACTTACTTTCCGAGCAACTCCACCAATCCAAAAGCAAAAGGAAGCCCATGCAATGTTTGGACTGGCATTTCATGTGACACTGCTGGAAGTGTCAACAAGATAAACCTAACCAGTTCTGGTATACAAGGTACGCTGCATGAATTTCCATTCCTGTTGTTGCCCAATCTTGAATATATTGACCTCAGCTTGAATGAACTCTTTGATGCCATCCCATCTCAGATTAGTTCCCTCTCCAAACTCATCTATTTTGATGTATCTTATAATAAGTTGTTTGGGATAATTCCACCAGAAATTGGTCTTCTCATAAATCTCGAGGTCCTACACCTAAATTCGAATCAGTTAAATGGTTCAATTCCTCAGGAACTAGGTCATCTCAAGTCTCTTTCCGAGCTTGCTCTTTGCAATAGTAGTCTAGAAGGTCCCATTCCTGCTTCTCTAGGTAATTTGAGTAATTTGACTTATTTGTATCTTTACTCAAATCAGCTTTCTGGTTCCATCCCACTAGAAATTGGTCTTCTGCCAAACCTTGAGGTCGTGAACCTGAGTGAAAACCAGTTAAATGGCTCAATTCCTGCTTCTCTAGGTAATTTGAGTAATTTGACTTATTTGTATCTTTACTCAAATCAGCTTTCTGGTTCCATCCCACTAGAAATTGGTCTTCTGCCAAACCTTGAGGTCGTGAACCTGAGTGAAAACCAGTTAAATGGCTCAATTCCTGCTTCTCTAAGTAAGTTAAACAGTCTGACTCATTTGTCTCTCAATGAAAATCAACTTTCGGGTTCAATTCCTGCTTCTCTAGGTGACTTGAGCGAGCTGACCCATTTGTCTCTCTATCACAACCAACTTTCTGGTTCCATCCCACCAGAAATTGGGCTGCTGAAAAATCTTGAGGTCCTAGACCTAAGTGGAAATCAGTTAAATGGTTCAATTCCCCCAGAAATAGGTCAGCTTCAGTTTCTTTCTGAGCTTTCTCTGTACAATAACACTCTAGAGGGTCCAATTCCCGCTTCTGTGGGTAATTTGAGTTACCTAGAAACTTTTTCTCTGTATGAAAATCAACTTTCTGGTTTCATACCTCTAGAAATTGGTAACCTGTCTAATTTGGTTGAGCTTTACATGCATAACAACAAATTAACAGGCCCCATCCCTCCAAATTTTGGAAGCTTCAAAAGGCTAACTTACATGCACTTGTACAACAATACTCTCTTCGGTTCTATCCCTTCAGAAATTGGAAATCTGAAATCTCTAACGGAATTATGCATACACAGCAACAACCTTTCTGGTCCCATCTCCATGTCTCTAGGTGATCTAACAAACCTTACCAGCCTTTATCTCTATGACAATCATCTTTCTGCAACTATTCCAAAAGAGATTGGGAACCTGAAATCTCTTGTGGACCTACAACTGAGCCAGAATCAACTCAATGGCTCCATTCCCACTTCGTTTGGTAACTTGAGAAACTTGGAAATCTTAAACCTCCGTGATAATCAACTTTCTGGCTCCATCCCCCAAGAGATAGGGAGTCTCATGAAGTTGACTAATCTGCAGTTGGATACTAACCAATTTTCTGGTCAGGTTCCCCATAATGTTTGCCGAGGTGGATCACTAGAAAGCTTTACAATACACACCAACCAGTTGACAGGTCCACTCTCCCAAAGCCTCAAAACTTGCAAGAGCTTAATCCGAGTCCGTCTTGAAGGGAATCATCTCATAGGCAATATATCTGAAGAGTTTGATGCATATCCAAATCTTCAATATATAGACCTAAGCCATAATAACTTCTACGGTGAAATCTCACCAATCTGGGGGCAATGTCCGCAGTTAGGAACCTTACAAATTGCGGGAAACAACCTCACAGGCAGCCTACCACCACAGATCGGCAATGCAGCCAAACTTCATGTACTCAATCTTTCTTCAAATCAACTAGTTGGGGTGATTCCTAATGAGGTTGGGAAATTGACTTCTTTGTTGAGACTGGGATTGAATGACAATCAACTGGGGGGTCATATACCCTCAGAGATTGGATCATTGACTGATCTTGAATATCTTGACCTATCCACCAATAACTTCAATGACTCCATTCCAAGTAGTTTAGGTGACTTGGTCAAACTACACCACTTGGATTTGGGCAACAACAAATTTGGTCAAGAAATTCCTTTCGAGTTGGGGAATCTAGCTCAGCTGTCAGAACTAGATCTCAGTAGCAATTTACTTCAGGGTGAAATACCATCAGAAATTAGCCATATGCAAAGCATGCAGAAGCTGAATCTTTCCCACAACAATCTTTCCGGTCTCATTCCAGAAAGTTTTAAACAGATGAATGGCTTGAATTACATCGACATGTCCTACAATCAATTGGAAGGTCCCATTCCCAACAACAAAGCATTTCAAGATGCTGCCTTGGAAGGAAATAAAGCGTTGTGTGGTAATGTTGGAGGACTTCAACCCTGCACCAATTCTTCCGTGAAAAACAAGCAAAAGCTCATGCTTTTAATCACTTTCCTTATTTTGGGAGAACTTTTACTGGCATTCTTTATAATTGCGGTGATTAGAAAAAGAAGAACAAAACAGAAGGACACAGAACAGAGCAACTTGCAGCATGAAGAGATTTTTCCGACATCTGATTTTGATGGCAAGAGAATGTATGAAGAAATCATCAAGGCAACAAATGGTTTTGACGCCTTATATTGCATCGGAAAGGGAGGATCTGGAAGTGTCTACAAGGCAAAGCTACCATCACGCAGCGTAGTTGCAGTGAAGAAACTCCATCCAATACTTGATAGTGATGAGACGTGTCAGAAGGACTTCTATAATGAAATAAGAGCACTACAAGAGGTACGGCACCGGAACATTTTGAAACTTCATGGTTTCTGTTCAAATGCACACCACTCATTTTTGGTCTACGAGTATCTAGAAAACGGTAGCTTGGCTTCAATCTTGAAAGAAAATAATGAGGCTAGAAAACTGGATTGGAGTACGAGGGTGAGAATCGTGCAAGGTGTGGCTCATGCCTTATCTTATATGCATCATGATTGCTCTCCACCTATTGTGCATCGAGACATCTCAAGCAACAACATTTTGCTTGATTACGAATATGAGCCGTGTGTCTCAGACTTTGGCACTGCGAAGCTGTTAAATCCAGACTCATCGAATTGGACTGCCCGTGCAGGCACATATGGATATGTGGCACCAGAGTTGGCTTACACGATGAAGGTAACCGAGAAGTGTGATGTGTATAGCTTTGGAGTGCTGGCTTTGGAAGTGATAATGGGAAATCAGCAGCCCATCTCATCTTTTTTGACGCCATCTGCGAACGGAGACATATTGCTGAAGGATGTATTGGACCAACGCCTCCCTGCTCCCACACCTCACGTTCAGGTTGAATTGCTAACCATTGCAAAGCTTGCAATTGAATGCAAACATTCCCATCCACAATCGAGGCCAACAATGCGCATGGTTTCTCAGGTGTTATCATCCCAAACTGCACATTCTTATGGGCAACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1224

Amino Acids

134.24

Weight (kDa)

5.47

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 111 - 210 1.6e-07 Leucine-rich repeat region
LRR_14 PF23598 201 - 309 2.2e-08 Leucine-rich repeat region
LRR_4 PF12799 207 - 246 9.6e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 241 - 336 2.5e-08 Leucine-rich repeat region
LRR_4 PF12799 255 - 294 8.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 321 - 407 4.5e-10 Leucine-rich repeat region
LRR_14 PF23598 414 - 501 4.9e-09 Leucine-rich repeat region
LRR_14 PF23598 508 - 669 5.5e-09 Leucine-rich repeat region
LRR_14 PF23598 667 - 764 2.7e-09 Leucine-rich repeat region
LRR_8 PF13855 783 - 842 4.5e-10 Leucine rich repeat
Pkinase PF00069 953 - 1210 6.4e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 954 - 1212 1.1e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 429, 2705
AasI GACNNNNNNGTC 2 cut(s) 919, 991
Acc16I TGCGCA 1 cut(s) 3620
AccB1I GGYRCC 2 cut(s) 3009, 3355
AccB7I CCANNNNNTGG 3 cut(s) 461, 1037, 1325
AccI GTMKAC 3 cut(s) 289, 2886, 3069
AciI CCGC 5 cut(s) 101, 1173, 1985, 2009, 2711
AclWI GGATC 3 cut(s) 1777, 2200, 2881
AcsI RAATTY 5 cut(s) 308, 496, 1321, 2306, 2319
AcuI CTGAAG 5 cut(s) 1103, 1374, 1914, 2366, 3518
AcyI GRCGYC 2 cut(s) 2847, 3470
AfaI GTAC 6 cut(s) 298, 1145, 1361, 2070, 3006, 3145
AfiI CCNNNNNNNGG 8 cut(s) 461, 1037, 1109, 1325, 1973, 1991, 2045, 2677
AflIII ACRYGT 2 cut(s) 2508, 2960
AhlI ACTAGT 1 cut(s) 2092
AjiI CACGTC 1 cut(s) 2961
AjnI CCWGG 1 cut(s) 164
AjuI GAANNNNNNNTTGG 6 cut(s) 1159, 1191, 3121, 3153, 3491, 3523
Alw21I GWGCWC 1 cut(s) 2995
AlwI GGATC 3 cut(s) 1777, 2200, 2881
AlwNI CAGNNNCTG 1 cut(s) 2431
Ama87I CYCGRG 1 cut(s) 479
AoxI GGCC 2 cut(s) 1306, 3608
ApeKI GCWGC 8 cut(s) 301, 1042, 2028, 2054, 2564, 2764, 2910, 3448
ApoI RAATTY 5 cut(s) 308, 496, 1321, 2306, 2319
Asp700I GAANNNNTTC 1 cut(s) 2972
AspLEI GCGC 1 cut(s) 3621
AsuII TTCGAA 1 cut(s) 500
AvaI CYCGRG 1 cut(s) 479
AvaII GGWCC 9 cut(s) 484, 587, 1060, 1163, 1451, 1564, 1811, 2531, 3511
AxyI CCTNAGG 1 cut(s) 525
BanI GGYRCC 2 cut(s) 3009, 3355
BarI GAAGNNNNNNTAC 2 cut(s) 3082, 3114
BbsI GAAGAC 3 cut(s) 458, 674, 818
Bbv12I GWGCWC 1 cut(s) 2995
BbvCI CCTCAGC 1 cut(s) 350
BbvI GCAGC 8 cut(s) 288, 1029, 2040, 2066, 2551, 2776, 2922, 3460
BceAI ACGGC 2 cut(s) 3023, 3253
BciT130I CCWGG 1 cut(s) 166
BciVI GTATCC 1 cut(s) 1714
BcuI ACTAGT 1 cut(s) 2092
BfmI CTRYAG 1 cut(s) 1712
BfuI GTATCC 1 cut(s) 1714
BglII AGATCT 1 cut(s) 2362
BisI GCNGC 8 cut(s) 302, 1043, 2029, 2055, 2565, 2765, 2911, 3449
BlpI GCTNAGC 1 cut(s) 2346
BlsI GCNGC 8 cut(s) 303, 1044, 2030, 2056, 2566, 2766, 2912, 3450
Bme1390I CCNGG 1 cut(s) 166
Bme18I GGWCC 9 cut(s) 484, 587, 1060, 1163, 1451, 1564, 1811, 2531, 3511
BmeT110I CYCGRG 1 cut(s) 479
BmgBI CACGTC 1 cut(s) 2961
BmrFI CCNGG 1 cut(s) 166
BmrI ACTGGG 2 cut(s) 2153, 2174
BmsI GCATC 6 cut(s) 361, 1894, 2551, 2868, 3202, 3229
BmuI ACTGGG 2 cut(s) 2153, 2174
BpiI GAAGAC 3 cut(s) 458, 674, 818
Bpu10I CCTNAGC 2 cut(s) 350, 1934
Bpu1102I GCTNAGC 1 cut(s) 2346
Bpu14I TTCGAA 1 cut(s) 500
BpuEI CTTGAG 7 cut(s) 527, 716, 860, 994, 1076, 1642, 3217
BsaBI GATNNNNATC 1 cut(s) 1908
BsaHI GRCGYC 2 cut(s) 2847, 3470
BsaI GGTCTC 1 cut(s) 2465
BsaJI CCNNGG 2 cut(s) 1762, 2568
BsaWI WCCGGW 2 cut(s) 2456, 3012
Bsc4I CCNNNNNNNGG 8 cut(s) 461, 1037, 1109, 1325, 1973, 1991, 2045, 2677
Bse21I CCTNAGG 1 cut(s) 525
Bse3DI GCAATG 4 cut(s) 226, 1985, 2056, 3561
Bse8I GATNNNNATC 1 cut(s) 1908
BseBI CCWGG 1 cut(s) 166
BseDI CCNNGG 2 cut(s) 1762, 2568
BseJI GATNNNNATC 1 cut(s) 1908
BseLI CCNNNNNNNGG 8 cut(s) 461, 1037, 1109, 1325, 1973, 1991, 2045, 2677
BseMI GCAATG 4 cut(s) 226, 1985, 2056, 3561
BseXI GCAGC 8 cut(s) 288, 1029, 2040, 2066, 2551, 2776, 2922, 3460
BsgI GTGCAG 3 cut(s) 2602, 3354, 3636
BshFI GGCC 2 cut(s) 1308, 3610
BshNI GGYRCC 2 cut(s) 3009, 3355
BsiHKAI GWGCWC 1 cut(s) 2995
BsiHKCI CYCGRG 1 cut(s) 479
BsiSI CCGG 2 cut(s) 2457, 3013
BslFI GGGAC 3 cut(s) 573, 1437, 2517
BslI CCNNNNNNNGG 8 cut(s) 461, 1037, 1109, 1325, 1973, 1991, 2045, 2677
BsmBI CGTCTC 1 cut(s) 2951
BsmFI GGGAC 3 cut(s) 573, 1437, 2517
BsmI GAATGC 2 cut(s) 2696, 3587
BsnI GGCC 2 cut(s) 1308, 3610
Bso31I GGTCTC 1 cut(s) 2465
BsoBI CYCGRG 1 cut(s) 479
Bsp119I TTCGAA 1 cut(s) 500
Bsp1286I GDGCHC 1 cut(s) 2995
Bsp1407I TGTACA 2 cut(s) 1143, 1359
Bsp143I GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
Bsp1720I GCTNAGC 1 cut(s) 2346
BspACI CCGC 5 cut(s) 101, 1173, 1985, 2009, 2711
BspANI GGCC 2 cut(s) 1308, 3610
BspHI TCATGA 2 cut(s) 1695, 3196
BspMAI CTGCAG 1 cut(s) 1716
BspPI GGATC 3 cut(s) 1777, 2200, 2881
BspQI GCTCTTC 1 cut(s) 114
BspT104I TTCGAA 1 cut(s) 500
BspT107I GGYRCC 2 cut(s) 3009, 3355
BspTNI GGTCTC 1 cut(s) 2465
BsrDI GCAATG 4 cut(s) 226, 1985, 2056, 3561
BsrGI TGTACA 2 cut(s) 1143, 1359
BssECI CCNNGG 2 cut(s) 1762, 2568
BssMI GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
BssNAI GTATAC 1 cut(s) 290
BssNI GRCGYC 2 cut(s) 2847, 3470
BssT1I CCWWGG 1 cut(s) 2568
Bst1107I GTATAC 1 cut(s) 290
Bst2UI CCWGG 1 cut(s) 166
Bst4CI ACNGT 3 cut(s) 908, 1955, 3089
Bst6I CTCTTC 4 cut(s) 114, 1379, 1890, 2766
BstACI GRCGYC 2 cut(s) 2847, 3470
BstAPI GCANNNNNTGC 2 cut(s) 2422, 3572
BstAUI TGTACA 2 cut(s) 1143, 1359
BstBI TTCGAA 1 cut(s) 500
BstC8I GCNNGC 7 cut(s) 127, 561, 980, 2423, 3337, 3420, 3573
BstEII GGTNACC 2 cut(s) 1256, 3382
BstHHI GCGC 1 cut(s) 3621
BstKTI GATC 8 cut(s) 8, 1477, 1772, 2046, 2195, 2206, 2365, 2876
BstMBI GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
BstMWI GCNNNNNNNGC 6 cut(s) 1285, 1434, 1984, 2422, 3572, 3616
BstNI CCWGG 1 cut(s) 166
BstNSI RCATGY 4 cut(s) 1288, 1354, 2425, 2512
BstPI GGTNACC 2 cut(s) 1256, 3382
BstSCI CCNGG 1 cut(s) 164
BstSFI CTRYAG 1 cut(s) 1712
BstV1I GCAGC 8 cut(s) 288, 1029, 2040, 2066, 2551, 2776, 2922, 3460
BstV2I GAAGAC 3 cut(s) 458, 674, 818
BstX2I RGATCY 2 cut(s) 2362, 2873
BstXI CCANNNNNNTGG 4 cut(s) 728, 872, 1016, 1736
BstYI RGATCY 2 cut(s) 2362, 2873
BstZ17I GTATAC 1 cut(s) 290
Bsu36I CCTNAGG 1 cut(s) 525
BsuI GTATCC 1 cut(s) 1714
BsuRI GGCC 2 cut(s) 1308, 3610
BtrI CACGTC 1 cut(s) 2961
BtsI GCAGTG 3 cut(s) 246, 2928, 3288
BtsIMutI CAGTG 3 cut(s) 246, 2928, 3288
Cac8I GCNNGC 7 cut(s) 127, 561, 980, 2423, 3337, 3420, 3573
CaiI CAGNNNCTG 1 cut(s) 2431
CciI TCATGA 2 cut(s) 1695, 3196
CfoI GCGC 1 cut(s) 3621
CseI GACGC 2 cut(s) 2855, 3478
Csp6I GTAC 6 cut(s) 297, 1144, 1360, 2069, 3005, 3144
CspCI CAANNNNNGTGG 2 cut(s) 1594, 1629
CviQI GTAC 6 cut(s) 297, 1144, 1360, 2069, 3005, 3144
DpnI GATC 8 cut(s) 7, 1476, 1771, 2045, 2194, 2205, 2364, 2875
DpnII GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
DraI TTTAAA 1 cut(s) 2479
DrdI GACNNNNNNGTC 2 cut(s) 919, 991
DseDI GACNNNNNNGTC 2 cut(s) 919, 991
Eam1104I CTCTTC 4 cut(s) 114, 1379, 1890, 2766
EarI CTCTTC 4 cut(s) 114, 1379, 1890, 2766
Eco130I CCWWGG 1 cut(s) 2568
Eco31I GGTCTC 1 cut(s) 2465
Eco47I GGWCC 9 cut(s) 484, 587, 1060, 1163, 1451, 1564, 1811, 2531, 3511
Eco57I CTGAAG 5 cut(s) 1103, 1374, 1914, 2366, 3518
Eco81I CCTNAGG 1 cut(s) 525
Eco88I CYCGRG 1 cut(s) 479
Eco91I GGTNACC 2 cut(s) 1256, 3382
EcoO109I RGGNCCY 5 cut(s) 484, 587, 1060, 1307, 2531
EcoO65I GGTNACC 2 cut(s) 1256, 3382
EcoRII CCWGG 1 cut(s) 164
EcoT14I CCWWGG 1 cut(s) 2568
EcoT22I ATGCAT 4 cut(s) 1290, 1430, 1909, 3195
ErhI CCWWGG 1 cut(s) 2568
Esp3I CGTCTC 1 cut(s) 2951
FalI AAGNNNNNCTT 2 cut(s) 1330, 1362
FaqI GGGAC 3 cut(s) 573, 1437, 2517
FauI CCCGC 2 cut(s) 1180, 2002
FauNDI CATATG 2 cut(s) 2412, 3343
FblI GTMKAC 3 cut(s) 289, 2886, 3069
Fnu4HI GCNGC 8 cut(s) 302, 1043, 2029, 2055, 2565, 2765, 2911, 3449
Fsp4HI GCNGC 8 cut(s) 302, 1043, 2029, 2055, 2565, 2765, 2911, 3449
FspAI RTGCGCAY 1 cut(s) 3620
FspI TGCGCA 1 cut(s) 3620
GlaI GCGC 1 cut(s) 3620
GluI GCNGC 8 cut(s) 302, 1043, 2029, 2055, 2565, 2765, 2911, 3449
HaeIII GGCC 2 cut(s) 1308, 3610
HapII CCGG 2 cut(s) 2457, 3013
HgaI GACGC 2 cut(s) 2855, 3478
HhaI GCGC 1 cut(s) 3621
Hin1I GRCGYC 2 cut(s) 2847, 3470
Hin6I GCGC 1 cut(s) 3619
HinP1I GCGC 1 cut(s) 3619
HincII GTYRAC 3 cut(s) 262, 1704, 1806
HindII GTYRAC 3 cut(s) 262, 1704, 1806
HindIII AAGCTT 3 cut(s) 1330, 1780, 3569
HpaII CCGG 2 cut(s) 2457, 3013
HpyCH4III ACNGT 3 cut(s) 908, 1955, 3089
HpyCH4IV ACGT 2 cut(s) 2960, 3540
HpyF10VI GCNNNNNNNGC 6 cut(s) 1285, 1434, 1984, 2422, 3572, 3616
HpySE526I ACGT 2 cut(s) 2960, 3540
Hsp92I GRCGYC 2 cut(s) 2847, 3470
HspAI GCGC 1 cut(s) 3619
Kzo9I GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
LguI GCTCTTC 1 cut(s) 114
LmnI GCTCC 3 cut(s) 1601, 1673, 3532
Lsp1109I GCAGC 8 cut(s) 288, 1029, 2040, 2066, 2551, 2776, 2922, 3460
LweI GCATC 6 cut(s) 361, 1894, 2551, 2868, 3202, 3229
MaeII ACGT 2 cut(s) 2960, 3540
MaeIII GTNAC 7 cut(s) 242, 968, 1193, 1256, 1616, 2264, 3382
MalI GATC 8 cut(s) 7, 1476, 1771, 2045, 2194, 2205, 2364, 2875
MboI GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
MfeI CAATTG 2 cut(s) 2522, 3576
MflI RGATCY 2 cut(s) 2362, 2873
MhlI GDGCHC 1 cut(s) 2995
MlyI GAGTC 5 cut(s) 907, 1699, 1863, 2237, 3305
MmeI TCCRAC 3 cut(s) 1698, 2581, 2807
Mph1103I ATGCAT 4 cut(s) 1290, 1430, 1909, 3195
MroXI GAANNNNTTC 1 cut(s) 2972
MslI CAYNNNNRTG 3 cut(s) 1460, 2507, 3660
MspA1I CMGCKG 2 cut(s) 40, 2350
MspI CCGG 2 cut(s) 2457, 3013
MspR9I CCNGG 1 cut(s) 166
MunI CAATTG 2 cut(s) 2522, 3576
Mva1269I GAATGC 2 cut(s) 2696, 3587
MvaI CCWGG 1 cut(s) 166
MwoI GCNNNNNNNGC 6 cut(s) 1285, 1434, 1984, 2422, 3572, 3616
NdeI CATATG 2 cut(s) 2412, 3343
NdeII GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
NmeAIII GCCGAG 1 cut(s) 1787
NmuCI GTSAC 3 cut(s) 242, 968, 2264
NsbI TGCGCA 1 cut(s) 3620
NsiI ATGCAT 4 cut(s) 1290, 1430, 1909, 3195
NspI RCATGY 4 cut(s) 1288, 1354, 2425, 2512
NspV TTCGAA 1 cut(s) 500
PaeI GCATGC 1 cut(s) 2425
PaeR7I CTCGAG 1 cut(s) 479
PagI TCATGA 2 cut(s) 1695, 3196
PciI ACATGT 1 cut(s) 2508
PciSI GCTCTTC 1 cut(s) 114
PcsI WCGNNNNNNNCGW 1 cut(s) 3476
PctI GAATGC 2 cut(s) 2696, 3587
PdmI GAANNNNTTC 1 cut(s) 2972
PfeI GAWTC 8 cut(s) 148, 502, 1582, 1870, 2104, 2338, 2434, 3156
PflFI GACNNNGTC 1 cut(s) 2270
PflMI CCANNNNNTGG 3 cut(s) 461, 1037, 1325
PfoI TCCNGGA 1 cut(s) 164
PkrI GCNGC 8 cut(s) 303, 1044, 2030, 2056, 2566, 2766, 2912, 3450
PleI GAGTC 5 cut(s) 907, 1698, 1862, 2237, 3305
PpsI GAGTC 5 cut(s) 907, 1698, 1862, 2237, 3305
PpuMI RGGWCCY 4 cut(s) 484, 587, 1060, 2531
PscI ACATGT 1 cut(s) 2508
PsiI TTATAA 2 cut(s) 429, 2705
Psp5II RGGWCCY 4 cut(s) 484, 587, 1060, 2531
Psp6I CCWGG 1 cut(s) 164
PspEI GGTNACC 2 cut(s) 1256, 3382
PspGI CCWGG 1 cut(s) 164
PspPPI RGGWCCY 4 cut(s) 484, 587, 1060, 2531
PstI CTGCAG 1 cut(s) 1716
PstNI CAGNNNCTG 1 cut(s) 2431
PsuI RGATCY 2 cut(s) 2362, 2873
PsyI GACNNNGTC 1 cut(s) 2270
PvuII CAGCTG 2 cut(s) 40, 2350
RsaI GTAC 6 cut(s) 298, 1145, 1361, 2070, 3006, 3145
RsaNI GTAC 6 cut(s) 297, 1144, 1360, 2069, 3005, 3144
RseI CAYNNNNRTG 3 cut(s) 1460, 2507, 3660
SapI GCTCTTC 1 cut(s) 114
SatI GCNGC 8 cut(s) 302, 1043, 2029, 2055, 2565, 2765, 2911, 3449
Sau3AI GATC 8 cut(s) 5, 1474, 1769, 2043, 2192, 2203, 2362, 2873
SchI GAGTC 5 cut(s) 907, 1699, 1863, 2237, 3305
ScrFI CCNGG 1 cut(s) 166
SduI GDGCHC 1 cut(s) 2995
SfaNI GCATC 6 cut(s) 361, 1894, 2551, 2868, 3202, 3229
SfcI CTRYAG 1 cut(s) 1712
Sfr274I CTCGAG 1 cut(s) 479
SfuI TTCGAA 1 cut(s) 500
SinI GGWCC 9 cut(s) 484, 587, 1060, 1163, 1451, 1564, 1811, 2531, 3511
SlaI CTCGAG 1 cut(s) 479
SmiMI CAYNNNNRTG 3 cut(s) 1460, 2507, 3660
SmlI CTYRAG 8 cut(s) 479, 542, 695, 839, 973, 1055, 1621, 3232
SmoI CTYRAG 8 cut(s) 479, 542, 695, 839, 973, 1055, 1621, 3232
SpeI ACTAGT 1 cut(s) 2092
SphI GCATGC 1 cut(s) 2425
SsiI CCGC 5 cut(s) 101, 1173, 1985, 2009, 2711
StyD4I CCNGG 1 cut(s) 164
StyI CCWWGG 1 cut(s) 2568
TaaI ACNGT 3 cut(s) 908, 1955, 3089
TaiI ACGT 2 cut(s) 2963, 3543
TaqI TCGA 7 cut(s) 480, 500, 2328, 2505, 3223, 3317, 3605
TatI WGTACW 3 cut(s) 1143, 1359, 2068
TfiI GAWTC 8 cut(s) 148, 502, 1582, 1870, 2104, 2338, 2434, 3156
TscAI CASTG 3 cut(s) 253, 2928, 3295
TseFI GTSAC 3 cut(s) 242, 968, 2264
TseI GCWGC 8 cut(s) 301, 1042, 2028, 2054, 2564, 2764, 2910, 3448
Tsp45I GTSAC 3 cut(s) 242, 968, 2264
TspGWI ACGGA 5 cut(s) 1433, 1637, 1847, 2620, 3498
TspRI CASTG 3 cut(s) 253, 2928, 3295
Tth111I GACNNNGTC 1 cut(s) 2270
Van91I CCANNNNNTGG 3 cut(s) 461, 1037, 1325
VpaK11BI GGWCC 9 cut(s) 484, 587, 1060, 1163, 1451, 1564, 1811, 2531, 3511
XapI RAATTY 5 cut(s) 308, 496, 1321, 2306, 2319
XbaI TCTAGA 4 cut(s) 580, 1156, 1246, 3079
XceI RCATGY 4 cut(s) 1288, 1354, 2425, 2512
XcmI CCANNNNNNNNNTGG 1 cut(s) 222
XhoI CTCGAG 1 cut(s) 479
XmiI GTMKAC 3 cut(s) 289, 2886, 3069
XmnI GAANNNNTTC 1 cut(s) 2972
Zsp2I ATGCAT 4 cut(s) 1290, 1430, 1909, 3195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.