Rmu_sc0004605.1_g000003

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004605.1
Physical Location & Seq
Forward (+)
20719 .. 23873
3155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004605.1_g000003.1.cds

Sequence Viewer

Length: 2943 bp
atgggagcatcaatctttcagaaactaggctttctttcattcctcatcatgtctgttgttttcgtttcgtcttccaaatatgttgcttcagctactgtttctactgatgaagttggtgctcttctccaatggaaaaccagccttcaagaccctcaatcactcttaacttcatggagtgctcagcacttctcaaatgcaacaagtccaacttcatggagtgctcagcacttcccaaatgacacaagtccatgcacttggtttgccatttcttgcaacaatgccaagagtgtcaccacaataaaccttactaagtcgggtttacaaggtacgcttcaccaattttcattctcctccttcccgaaccttcagcactttgatctcagcatgaactcaatctttagtaccattccacctgaaatcaatcaactgtccaaactagtgtatcttgatttatctgataacttgttgaatggttcaattcctgcttctttcggaaaccttagtagtcttgcttacttgaatctgggtaggaactttcttactagttcagttcctttagaaatgggcaatctaccagagttggtggagctttacttgaataccaacaaacttacaggtcagatcccacaaactttcgggaacttaagaaagctaaaagtactatacatgtttgagaacatatttgttggctccattcccttggagatagggaatttggcatctctcagcaatctaagtcttcacaccaacaacttttctggaagtatcccggattccatatgtgacctgagacaccttactgcactcaaactgcatcggaacaatctttcaggcccaattccggaaaatattggaagcttgaagtctcttgttgttctaaatgtcggagatcttatgaacttgactgtgctaagagttgctagaaacaatttgactggtcatttaccacagaatctctgcaaatgtggagtgcttgcatcgtttacagctaatggcaatcgtctcataggtcgaatgcctgaaagcttgagaaactgcacaaccttgcatagagtccgtcttgatgggaaccagttcactggaaatatatctgaagattttggtgaatatccaaacttggattacataaatctaagtgacaataatttttatggtgaaatttcagagaaatggggcaagtctctgcagctaacagatcttgagattgcaggtaacaacataacaggttccattccacctgagattggtaatttgactcaactacatgtgcttaatctttcttcaaatcatttagttgggaaaatccctttgggactaggaaagttgacctttttggagaggcttatactgaacgacaatcaactttctggtactgtacctgaagaacttggatcactgactgaccttgagtttcttgacctgtccaaaaacaacttgagccagtcaattcctagtagtctggggaacctagtgaaactgcaccacctgaacttgagcaacaacgagttgagccatggaaccccaaccaagttgggtcagttgaagcagctctctgtgctagatttgagtcataactttcttagtcaagagataccaaaggagttttgtaatttggaaagcttgttgacactgaatctgtcccacaataacctctctggtattgttccccagacttttgctgaccttcatggcttggagttcgttgacatatcatacaatcgattatggggtccgattccagaaaacaaagcatttcaagaagctcctatagaagcattgcaagggaatcaaggtctgtgtggcaatgctacaggtctacagccctgcactaagaatcctggcaaaaagaagcacagctcgaacattggttataaagtcatgtgcttggtaatcccacctgtggtaggagtacttatacttgttttctgtggaatttatatcacttacagaagaaaacagatttgtcaaaaaacagatgaagaggagttgcaccctaaagaatttgaacttcgttcaatgtcgatttttgaaggaaaattgttgtatgaagaaattgcaaaagcaactgaggattttgatgatgcttattgcattgggaagggaggcactggaagcgtttacaaggcaaagcttccatctgatgacttggttgctgtaaagaaactccatagtactcaatgtgatggtgagaggagctttgaaaaagagttcttaaacgaggtgatggcattgactgagatacgccaccggaacattgtgaaattttatggctcttgttcacatccacgacactcacttttggtttatgggtacctcgaaaggggtagcttgttctcaatcttgtccaatgaagaagcagccaaggaattggattggagcaagagggtgaatatcatcaaaggtgttgctcatggcttatcatacatgcactctgatgtatcgccgccaattgttcatcgggacataaccagcaagaacattttgctagatgccgagtatgaggcttgcatttcggactttggcagtgctaagctgctacagcccggtgcaactaattggactgctgtcgcaggcacattgggatatgtagcaccagagcttgcttatacattgaaggtgactgagaaatgtgatgtttacagcttcggagtattggcacttgaagtgatgaacgggaagtacccgagtaatctaatcaggtctttgttgtcacaagctgcaatcatggaaggaaaattgccagaagatgtgtgggacgaccgccttgaacatcccatgggtaaaattctggaagaacttcttactgtcttaatggtagcagtcgcatgcttacatccaaatccacagtttaggcctaccatgtatgacgtttctcagtttataacaatgcaaatcgatctctcagacagagttggactaatacaaggctcaatctgtgtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

980

Amino Acids

108.06

Weight (kDa)

5.88

Isoelectric Point (pI)

36.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1872, 2882
Acc36I ACCTGC 1 cut(s) 1199
Acc65I GGTACC 1 cut(s) 2310
AccB1I GGYRCC 1 cut(s) 2310
AccI GTMKAC 1 cut(s) 1816
AccIII TCCGGA 1 cut(s) 841
AciI CCGC 2 cut(s) 2444, 2761
AclWI GGATC 2 cut(s) 616, 1399
AcsI RAATTY 6 cut(s) 712, 1158, 1932, 2000, 2261, 2784
AcuI CTGAAG 4 cut(s) 72, 350, 1113, 1401
AfaI GTAC 9 cut(s) 328, 403, 660, 1372, 1377, 1911, 2173, 2312, 2681
AfiI CCNNNNNNNGG 5 cut(s) 841, 1244, 1900, 1904, 2320
AflII CTTAAG 1 cut(s) 643
AflIII ACRYGT 2 cut(s) 666, 1264
AhlI ACTAGT 2 cut(s) 436, 542
AjnI CCWGG 1 cut(s) 1837
AjuI GAANNNNNNNTTGG 2 cut(s) 1292, 1324
Alw21I GWGCWC 3 cut(s) 121, 181, 223
Alw26I GTCTC 4 cut(s) 784, 870, 1007, 1185
AlwI GGATC 2 cut(s) 616, 1399
AlwNI CAGNNNCTG 1 cut(s) 95
Ama87I CYCGRG 1 cut(s) 2683
Aor13HI TCCGGA 1 cut(s) 841
AoxI GGCC 2 cut(s) 832, 2852
ApeKI GCWGC 5 cut(s) 1186, 1546, 2357, 2533, 2717
ApoI RAATTY 6 cut(s) 712, 1158, 1932, 2000, 2261, 2784
Asp700I GAANNNNTTC 2 cut(s) 1073, 2796
Asp718I GGTACC 1 cut(s) 2310
AspS9I GGNCC 2 cut(s) 833, 1730
AsuC2I CCSGG 2 cut(s) 770, 2544
AsuHPI GGTGA 8 cut(s) 283, 326, 1115, 1166, 2198, 2233, 2398, 2629
AvaI CYCGRG 1 cut(s) 2683
AvaII GGWCC 1 cut(s) 1730
BaeI ACNNNNGTAYC 2 cut(s) 425, 458
BanI GGYRCC 1 cut(s) 2310
BbsI GAAGAC 2 cut(s) 63, 731
Bbv12I GWGCWC 3 cut(s) 121, 181, 223
BbvI GCAGC 5 cut(s) 1198, 1558, 2369, 2520, 2704
BccI CCATC 4 cut(s) 1058, 2143, 2177, 2218
BciT130I CCWGG 1 cut(s) 1839
BciVI GTATCC 1 cut(s) 776
BcnI CCSGG 2 cut(s) 770, 2544
BcoDI GTCTC 4 cut(s) 784, 870, 1007, 1185
BcuI ACTAGT 2 cut(s) 436, 542
BfaI CTAG 9 cut(s) 26, 437, 543, 921, 1316, 1452, 1469, 1559, 2486
BfmI CTRYAG 5 cut(s) 1184, 1767, 1809, 1817, 2537
BfrI CTTAAG 1 cut(s) 643
BfuAI ACCTGC 1 cut(s) 1199
BfuI GTATCC 1 cut(s) 776
BglII AGATCT 2 cut(s) 889, 1195
BisI GCNGC 6 cut(s) 1187, 1547, 2358, 2444, 2534, 2718
BlpI GCTNAGC 3 cut(s) 180, 222, 2529
BlsI GCNGC 6 cut(s) 1188, 1548, 2359, 2445, 2535, 2719
BmcAI AGTACT 3 cut(s) 660, 1911, 2173
Bme1390I CCNGG 3 cut(s) 770, 1839, 2544
Bme18I GGWCC 1 cut(s) 1730
BmeT110I CYCGRG 1 cut(s) 2683
BmgT120I GGNCC 2 cut(s) 833, 1730
BmiI GGNNCC 7 cut(s) 691, 1070, 1228, 1466, 1519, 1731, 2312
BmrFI CCNGG 3 cut(s) 770, 1839, 2544
BmsI GCATC 6 cut(s) 17, 728, 823, 986, 2071, 2479
BoxI GACNNNNGTC 2 cut(s) 243, 2564
BpiI GAAGAC 2 cut(s) 63, 731
Bpu1102I GCTNAGC 3 cut(s) 180, 222, 2529
BpuEI CTTGAG 5 cut(s) 1048, 1220, 1427, 1456, 1513
BpuMI CCSGG 2 cut(s) 770, 2544
Bsa29I ATCGAT 2 cut(s) 1720, 2895
BsaJI CCNNGG 4 cut(s) 699, 1513, 2361, 2775
BsaWI WCCGGW 2 cut(s) 841, 2247
Bsc4I CCNNNNNNNGG 5 cut(s) 841, 1244, 1900, 1904, 2320
Bse1I ACTGG 5 cut(s) 940, 1072, 1084, 1441, 2113
Bse3DI GCAATG 2 cut(s) 1775, 1810
BseAI TCCGGA 1 cut(s) 841
BseBI CCWGG 1 cut(s) 1839
BseCI ATCGAT 2 cut(s) 1720, 2895
BseDI CCNNGG 4 cut(s) 699, 1513, 2361, 2775
BseGI GGATG 3 cut(s) 2281, 2770, 2833
BseLI CCNNNNNNNGG 5 cut(s) 841, 1244, 1900, 1904, 2320
BseMI GCAATG 2 cut(s) 1775, 1810
BseNI ACTGG 5 cut(s) 940, 1072, 1084, 1441, 2113
BseRI GAGGAG 3 cut(s) 340, 1997, 2206
BseXI GCAGC 5 cut(s) 1198, 1558, 2369, 2520, 2704
BsgI GTGCAG 4 cut(s) 786, 1021, 1463, 1810
Bsh1285I CGRYCG 1 cut(s) 2761
BshFI GGCC 2 cut(s) 834, 2854
BshNI GGYRCC 1 cut(s) 2310
BshVI ATCGAT 2 cut(s) 1720, 2895
BsiEI CGRYCG 1 cut(s) 2761
BsiHKAI GWGCWC 3 cut(s) 121, 181, 223
BsiHKCI CYCGRG 1 cut(s) 2683
BsiSI CCGG 4 cut(s) 770, 842, 2248, 2544
BslFI GGGAC 4 cut(s) 1326, 1624, 2474, 2768
BslI CCNNNNNNNGG 5 cut(s) 841, 1244, 1900, 1904, 2320
BsmAI GTCTC 4 cut(s) 784, 870, 1007, 1185
BsmBI CGTCTC 1 cut(s) 1007
BsmFI GGGAC 4 cut(s) 1326, 1624, 2474, 2768
BsmI GAATGC 1 cut(s) 1020
BsnI GGCC 2 cut(s) 834, 2854
BsoBI CYCGRG 1 cut(s) 2683
Bsp1286I GDGCHC 3 cut(s) 121, 181, 223
Bsp13I TCCGGA 1 cut(s) 841
Bsp143I GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
Bsp1720I GCTNAGC 3 cut(s) 180, 222, 2529
Bsp19I CCATGG 2 cut(s) 1513, 2775
BspACI CCGC 2 cut(s) 2444, 2761
BspANI GGCC 2 cut(s) 834, 2854
BspDI ATCGAT 2 cut(s) 1720, 2895
BspEI TCCGGA 1 cut(s) 841
BspLI GGNNCC 7 cut(s) 691, 1070, 1228, 1466, 1519, 1731, 2312
BspMAI CTGCAG 1 cut(s) 1188
BspMI ACCTGC 1 cut(s) 1199
BspPI GGATC 2 cut(s) 616, 1399
BspQI GCTCTTC 1 cut(s) 126
BspT107I GGYRCC 1 cut(s) 2310
BspTI CTTAAG 1 cut(s) 643
BsrDI GCAATG 2 cut(s) 1775, 1810
BsrI ACTGG 5 cut(s) 940, 1072, 1084, 1441, 2113
BssECI CCNNGG 4 cut(s) 699, 1513, 2361, 2775
BssMI GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
BssT1I CCWWGG 4 cut(s) 699, 1513, 2361, 2775
Bst2UI CCWGG 1 cut(s) 1839
Bst4CI ACNGT 6 cut(s) 97, 429, 907, 1375, 2806, 2847
Bst6I CTCTTC 2 cut(s) 126, 1974
BstAFI CTTAAG 1 cut(s) 643
BstC8I GCNNGC 5 cut(s) 975, 2506, 2572, 2601, 2827
BstDSI CCRYGG 2 cut(s) 1513, 2775
BstENI CCTNNNNNAGG 1 cut(s) 1902
BstF5I GGATG 3 cut(s) 2281, 2770, 2833
BstKTI GATC 6 cut(s) 379, 624, 892, 1198, 1394, 2899
BstMAI GTCTC 4 cut(s) 784, 870, 1007, 1185
BstMBI GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
BstMCI CGRYCG 1 cut(s) 2761
BstMWI GCNNNNNNNGC 3 cut(s) 1555, 2112, 2539
BstNI CCWGG 1 cut(s) 1839
BstNSI RCATGY 4 cut(s) 670, 1268, 2428, 2829
BstPAI GACNNNNGTC 2 cut(s) 243, 2564
BstSCI CCNGG 3 cut(s) 768, 1837, 2542
BstSFI CTRYAG 5 cut(s) 1184, 1767, 1809, 1817, 2537
BstV1I GCAGC 5 cut(s) 1198, 1558, 2369, 2520, 2704
BstV2I GAAGAC 2 cut(s) 63, 731
BstX2I RGATCY 3 cut(s) 621, 889, 1195
BstXI CCANNNNNNTGG 5 cut(s) 213, 255, 700, 1079, 2368
BstYI RGATCY 3 cut(s) 621, 889, 1195
Bsu15I ATCGAT 2 cut(s) 1720, 2895
BsuI GTATCC 1 cut(s) 776
BsuRI GGCC 2 cut(s) 834, 2854
BsuTUI ATCGAT 2 cut(s) 1720, 2895
BtgI CCRYGG 2 cut(s) 1513, 2775
BtsCI GGATG 3 cut(s) 2281, 2770, 2833
BtsI GCAGTG 1 cut(s) 2530
BtsIMutI CAGTG 5 cut(s) 1077, 1394, 1628, 2106, 2530
BveI ACCTGC 1 cut(s) 1199
Cac8I GCNNGC 5 cut(s) 975, 2506, 2572, 2601, 2827
CaiI CAGNNNCTG 1 cut(s) 95
Cfr13I GGNCC 2 cut(s) 833, 1730
ClaI ATCGAT 2 cut(s) 1720, 2895
Csp6I GTAC 9 cut(s) 327, 402, 659, 1371, 1376, 1910, 2172, 2311, 2680
CviQI GTAC 9 cut(s) 327, 402, 659, 1371, 1376, 1910, 2172, 2311, 2680
DpnI GATC 6 cut(s) 378, 623, 891, 1197, 1393, 2898
DpnII GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
Eam1104I CTCTTC 2 cut(s) 126, 1974
EarI CTCTTC 2 cut(s) 126, 1974
Eco130I CCWWGG 4 cut(s) 699, 1513, 2361, 2775
Eco147I AGGCCT 1 cut(s) 2854
Eco47I GGWCC 1 cut(s) 1730
Eco57I CTGAAG 4 cut(s) 72, 350, 1113, 1401
Eco88I CYCGRG 1 cut(s) 2683
EcoNI CCTNNNNNAGG 1 cut(s) 1902
EcoRII CCWGG 1 cut(s) 1837
EcoT14I CCWWGG 4 cut(s) 699, 1513, 2361, 2775
ErhI CCWWGG 4 cut(s) 699, 1513, 2361, 2775
Esp3I CGTCTC 1 cut(s) 1007
FalI AAGNNNNNCTT 8 cut(s) 193, 225, 315, 347, 1313, 1345, 2784, 2816
FaqI GGGAC 4 cut(s) 1326, 1624, 2474, 2768
FauNDI CATATG 1 cut(s) 779
FblI GTMKAC 1 cut(s) 1816
Fnu4HI GCNGC 6 cut(s) 1187, 1547, 2358, 2444, 2534, 2718
FokI GGATG 3 cut(s) 2268, 2757, 2820
Fsp4HI GCNGC 6 cut(s) 1187, 1547, 2358, 2444, 2534, 2718
FspBI CTAG 9 cut(s) 26, 437, 543, 921, 1316, 1452, 1469, 1559, 2486
GluI GCNGC 6 cut(s) 1187, 1547, 2358, 2444, 2534, 2718
HaeIII GGCC 2 cut(s) 834, 2854
HapII CCGG 4 cut(s) 770, 842, 2248, 2544
HincII GTYRAC 3 cut(s) 1326, 1626, 1705
HindII GTYRAC 3 cut(s) 1326, 1626, 1705
HindIII AAGCTT 4 cut(s) 856, 1024, 1618, 2129
HpaII CCGG 4 cut(s) 770, 842, 2248, 2544
HphI GGTGA 8 cut(s) 283, 326, 1115, 1166, 2198, 2233, 2398, 2629
HpyAV CCTTC 8 cut(s) 152, 364, 374, 1694, 2024, 2092, 2608, 2723
HpyCH4III ACNGT 6 cut(s) 97, 429, 907, 1375, 2806, 2847
HpyCH4IV ACGT 1 cut(s) 2868
HpyF10VI GCNNNNNNNGC 3 cut(s) 1555, 2112, 2539
HpySE526I ACGT 1 cut(s) 2868
Kpn2I TCCGGA 1 cut(s) 841
KpnI GGTACC 1 cut(s) 2314
Kzo9I GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
LguI GCTCTTC 1 cut(s) 126
LmnI GCTCC 6 cut(s) 5, 586, 695, 1768, 2193, 2376
Lsp1109I GCAGC 5 cut(s) 1198, 1558, 2369, 2520, 2704
LweI GCATC 6 cut(s) 17, 728, 823, 986, 2071, 2479
MaeI CTAG 9 cut(s) 26, 437, 543, 921, 1316, 1452, 1469, 1559, 2486
MaeII ACGT 1 cut(s) 2868
MaeIII GTNAC 6 cut(s) 289, 782, 1136, 1211, 2617, 2709
MalI GATC 6 cut(s) 378, 623, 891, 1197, 1393, 2898
MboI GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
MfeI CAATTG 1 cut(s) 2448
MflI RGATCY 3 cut(s) 621, 889, 1195
MhlI GDGCHC 3 cut(s) 121, 181, 223
MlyI GAGTC 3 cut(s) 1062, 1249, 1576
MmeI TCCRAC 3 cut(s) 230, 865, 2893
MroI TCCGGA 1 cut(s) 841
MroXI GAANNNNTTC 2 cut(s) 1073, 2796
MseI TTAA 5 cut(s) 164, 644, 1272, 2213, 2810
MslI CAYNNNNRTG 1 cut(s) 2433
MspCI CTTAAG 1 cut(s) 643
MspI CCGG 4 cut(s) 770, 842, 2248, 2544
MspR9I CCNGG 3 cut(s) 770, 1839, 2544
MunI CAATTG 1 cut(s) 2448
Mva1269I GAATGC 1 cut(s) 1020
MvaI CCWGG 1 cut(s) 1839
MwoI GCNNNNNNNGC 3 cut(s) 1555, 2112, 2539
NciI CCSGG 2 cut(s) 770, 2544
NcoI CCATGG 2 cut(s) 1513, 2775
NdeI CATATG 1 cut(s) 779
NdeII GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
NlaIV GGNNCC 7 cut(s) 691, 1070, 1228, 1466, 1519, 1731, 2312
NmeAIII GCCGAG 1 cut(s) 2518
NmuCI GTSAC 5 cut(s) 289, 782, 1136, 2617, 2709
NspI RCATGY 4 cut(s) 670, 1268, 2428, 2829
PaeI GCATGC 1 cut(s) 2829
PceI AGGCCT 1 cut(s) 2854
PciI ACATGT 2 cut(s) 666, 1264
PciSI GCTCTTC 1 cut(s) 126
PctI GAATGC 1 cut(s) 1020
PdmI GAANNNNTTC 2 cut(s) 1073, 2796
PfeI GAWTC 7 cut(s) 520, 773, 952, 1633, 1735, 1786, 1834
PfoI TCCNGGA 1 cut(s) 768
PkrI GCNGC 6 cut(s) 1188, 1548, 2359, 2445, 2535, 2719
PleI GAGTC 3 cut(s) 1061, 1249, 1575
PpsI GAGTC 3 cut(s) 1061, 1249, 1575
PscI ACATGT 2 cut(s) 666, 1264
PshAI GACNNNNGTC 2 cut(s) 243, 2564
PsiI TTATAA 2 cut(s) 1872, 2882
Psp6I CCWGG 1 cut(s) 1837
PspGI CCWGG 1 cut(s) 1837
PspN4I GGNNCC 7 cut(s) 691, 1070, 1228, 1466, 1519, 1731, 2312
PspPI GGNCC 2 cut(s) 833, 1730
PsrI GAACNNNNNNTAC 2 cut(s) 2663, 2695
PstI CTGCAG 1 cut(s) 1188
PstNI CAGNNNCTG 1 cut(s) 95
PsuI RGATCY 3 cut(s) 621, 889, 1195
RsaI GTAC 9 cut(s) 328, 403, 660, 1372, 1377, 1911, 2173, 2312, 2681
RsaNI GTAC 9 cut(s) 327, 402, 659, 1371, 1376, 1910, 2172, 2311, 2680
RseI CAYNNNNRTG 1 cut(s) 2433
SapI GCTCTTC 1 cut(s) 126
SaqAI TTAA 5 cut(s) 164, 644, 1272, 2213, 2810
SatI GCNGC 6 cut(s) 1187, 1547, 2358, 2444, 2534, 2718
Sau3AI GATC 6 cut(s) 376, 621, 889, 1195, 1391, 2896
Sau96I GGNCC 2 cut(s) 833, 1730
ScaI AGTACT 3 cut(s) 660, 1911, 2173
SchI GAGTC 3 cut(s) 1062, 1249, 1576
ScrFI CCNGG 3 cut(s) 770, 1839, 2544
SduI GDGCHC 3 cut(s) 121, 181, 223
SfaNI GCATC 6 cut(s) 17, 728, 823, 986, 2071, 2479
SfcI CTRYAG 5 cut(s) 1184, 1767, 1809, 1817, 2537
SinI GGWCC 1 cut(s) 1730
SmiMI CAYNNNNRTG 1 cut(s) 2433
SmlI CTYRAG 6 cut(s) 643, 1027, 1199, 1406, 1435, 1492
SmoI CTYRAG 6 cut(s) 643, 1027, 1199, 1406, 1435, 1492
SpeI ACTAGT 2 cut(s) 436, 542
SphI GCATGC 1 cut(s) 2829
SseBI AGGCCT 1 cut(s) 2854
SsiI CCGC 2 cut(s) 2444, 2761
SspI AATATT 1 cut(s) 850
SspMI CTAG 9 cut(s) 26, 437, 543, 921, 1316, 1452, 1469, 1559, 2486
StuI AGGCCT 1 cut(s) 2854
StyD4I CCNGG 3 cut(s) 768, 1837, 2542
StyI CCWWGG 4 cut(s) 699, 1513, 2361, 2775
TaaI ACNGT 6 cut(s) 97, 429, 907, 1375, 2806, 2847
TaiI ACGT 1 cut(s) 2871
TaqI TCGA 6 cut(s) 1012, 1720, 1859, 2021, 2316, 2895
TatI WGTACW 3 cut(s) 658, 1909, 2171
TauI GCSGC 1 cut(s) 2446
TfiI GAWTC 7 cut(s) 520, 773, 952, 1633, 1735, 1786, 1834
Tru1I TTAA 5 cut(s) 164, 644, 1272, 2213, 2810
Tru9I TTAA 5 cut(s) 164, 644, 1272, 2213, 2810
TscAI CASTG 5 cut(s) 1084, 1401, 1635, 2113, 2530
TseFI GTSAC 5 cut(s) 289, 782, 1136, 2617, 2709
TseI GCWGC 5 cut(s) 1186, 1546, 2357, 2533, 2717
Tsp45I GTSAC 5 cut(s) 289, 782, 1136, 2617, 2709
TspGWI ACGGA 1 cut(s) 1046
TspRI CASTG 5 cut(s) 1084, 1401, 1635, 2113, 2530
Vha464I CTTAAG 1 cut(s) 643
VpaK11BI GGWCC 1 cut(s) 1730
XagI CCTNNNNNAGG 1 cut(s) 1902
XapI RAATTY 6 cut(s) 712, 1158, 1932, 2000, 2261, 2784
XceI RCATGY 4 cut(s) 670, 1268, 2428, 2829
XcmI CCANNNNNNNNNTGG 1 cut(s) 2748
XmiI GTMKAC 1 cut(s) 1816
XmnI GAANNNNTTC 2 cut(s) 1073, 2796
XspI CTAG 9 cut(s) 26, 437, 543, 921, 1316, 1452, 1469, 1559, 2486
ZrmI AGTACT 3 cut(s) 660, 1911, 2173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.