MD17G1153200.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
14354194 .. 14357637
3444 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1153200.v1.1.491

Sequence Viewer

Length: 3054 bp
ATGAGATTTTCAGCTTATTGCGATAAAGTATGCTTTCTAGCTTGCCTTATCTTGTCTCTTCAGCTAAATTCATCACAAAAAACTGTTTTTGCTTCTGCCAATTCCACTGAAGCAGAAGCACTTCTCAAATGGAAAGCTAGCTTTCAAAACCAAACCGAAAACAACCTGACCTCATGGATGAATGCAAATGAAGCTCCATGCAATACTTGGATTGGTGTTTCATGCAACTCAGCTGGAAGTGTCAACAGATTAAACCTCACCAATTCTGGTATACAAGGTACTCTACTTGAATTTCCATTCATGTCATTGCCTAATCTCGCATATGTTGATCTAAGCTACAACGAACTTTTTGATCAAATCCCACCTGAGATCAGTTCCCTCACCAAACTCATCTACTTTGATGTCTCTTATAATCAAATGTCTGGAAAAATCCCACCCGAAATCAGTCTTCTAACAAATCTTCAAGTCCTTCACCTAAATGCAAATAAGTTCAATGGCTCAATTCCTCAAGAAATAGGCCAACTTAAATTTGTCTATGAGCTAGCTCTAAACTATAATAATTTAGAGGGTTCAATTCCAGCTTCTATGGGTAATCTGAGCCAATTGAGCTCTTTGACACTCTCCGGAAACCAACTTTCGGGTTCTATTCCTCCTGCAATAGGAAACCTTTCAAACTTGGTTGAACTTTACCTGTTTGACAACTATTTATCAAGCCCAATCCCTCAGAGTTTCGGAAACTTGAAAAATCTAACCATGGTGTTCTTGTACAACAATACCCTTTCTGGTTCGATCCCAACTTCTTTGGGCAATTTGACAAACCTTGTTTATCTCTCTCTCTACGACAATAAACTTTCCGGTACTATTCCTGAAGAGATTGGAAACTTGAAATTTGTTGTGACTCTAGACCTGGCCCGCAATCAGCTCAATGGAACCATTCCCTCTTCATTCGGCAACTTGAGCAGCCTAGAAAACCTATACCTCCGCGGCAACCAGCTATCTGGATCAATCCCCCAAGAGATGGAGAATCTAATGAAGTTGACGCTACTTGACTTGGGTACTAACCGATTTTCTGGTTATTTGCCTCGAGATATTTGTAGAGGTGGACTGCTACAAAAGTTTACTGCAGAGAAGAACGAGTTTACAGGTCCAATCCCGAAAAGCTTGAAAGATTGCAAGAGCTTAGTCAGAGTCCGTCTTGAAGGGAACCAATTTACAAGCAATAATATATCTGAAGACTTTGGCGTCTATCCGAATCTTCAGTTTGTAGACCTAAGCCACAACAACTTACATGGCGAAATCTCACACATATGGGGACAGTGTCCAAACTTAACAACCCTACGGATTGCGGGGAACAAGCTTACTGGTAGCATACCATCTGAGATTGTCAATGCAAATAAAATTCAAGAACTCGATTTTTCTGCGAATCATCTGGTTGGGGTGGTTCCCAAGGATTTGGGGAGATTGACTTCTATGCTGAACCTGAAGTTGAATGGCAATCAGCTTTCGGGTTCTATACCCTCAGAATTCGGAGCATTCACTGAACTCGAACATCTTGACGTGTCCACCAACAAGTTGAATGGGTCAATTCCAAGCATTGTTGGCGAATTGGTCCGTTTAAACTACTTGAATTTGAGCAACAACAATTTCAGTCAAGAAATTCCATTTCAGTTGGGGAAGTTATTTCACCTGTCACAGTTAGATTTAAGTCGTAACTTACTTGGCGGCAAGATACCATCAGAAATTAGCAATATGCAGAGCTTGGAGTGGCTGAATCTTTCCCACAATAATCTTTCCGGTCTCATTCCAGCAACGTTTGATGGAATGCGTGGCTTGTTGTACATAGACGTATCCTACAATCGCTTGCAGGGCCCCATCCCCAACAACAAAGCATTTCAAGATGGTCACAGCTTTGAAGGGAACGAAGGATTGTGTGGAAATGTTGTAGGTCTACAATCCTGCAATAAGCACGTCTCAAAAAGAAAAAACAACAGAAAACTCGTGTTTGCAATCGTTTTCCCTATCTTGGGAGTAGTTTTACTTGCTTTCCTTGCAATTTTCTTCATCGGAACAAGAAGAAAGAAAGAGCCAGAAACAGAAAAGAGTGATATCCATGATGAAGTTTTTTCAATCTCTCATTTTGATGGAAAAAAATTGTATTGGGAGATCATATGTGCAACCAATGCTTTTGACTCCAAATTTTGCATTGGGAAGGGAGGATCCGGAAGTGTCTACATGGCAAAGCTACCATCAGGCAGCATAGTTGCAGTGAAGAAACTCCATCAAAAACTTGACAGCGTGGAGACATCACAGAAGGAGTTCCACAATGAAATAAGCGCACTAATCAATACACGACATCGAAACATTGTGAAACTTTGTGGTTTTTGTTCAAATTCACAGCACTCCTTTCTGGTCTATGAATATCTAGAAAAGGGTAGTCTGGCTTCAATCTTGAGCAAAGAAGACGAAGCAAAAGAATTGGATTGGAGTAGGAGGGTGAGAATTGTACAAGGCGTAGCTCATGCACTGTCTTACATGCATCATGATTGCGTGCCGCCAATTGTACACCGAGACATATCAAGCAGCAACATTTTACTCGATTACGACTATGAGCCTTGTGTTTCAGACTTCGGCACTGCTAAGCTTTTGAATCCAGACTCATCGCATTGGAGCTCCCTTGCAGGCACACTCGGATATGTGGCACCAGAGTTGGCCTACACAATGAAGGTAACCGAGAAATGTGACGTTTATAGCTTCGGAGTGCTAGCACTGGAAGTGATCACGGGAAAGCGACTAGGTGATTTAATCTCATCCTTTTCGTCTCCATCCGCGTGTGAAAACAAATTGCTGAAGGATGTATTAGACCAACGGCTTCCACCTCCTACACCTGAAGTTGCAAATGAACTGACAACCATTGCAAGGGTAGCAATCGCATGCAGGCATTCGCAACCGCAATCAAGGCCAACAATGCACATGGTTTCTCAGTCATTATCATTTCAAACTGCAGCTTCCAATGGAGGACCAATCATCACACTTGAAGAACTCATTAAGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1018

Amino Acids

112.09

Weight (kDa)

6.24

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 76 4.2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 102 - 182 6.4e-06 Leucine-rich repeat region
LRR_8 PF13855 104 - 164 9.8e-06 Leucine rich repeat
LRR_14 PF23598 167 - 252 9.6e-08 Leucine-rich repeat region
LRR_8 PF13855 224 - 284 2.7e-06 Leucine rich repeat
LRR_14 PF23598 266 - 351 4.9e-12 Leucine-rich repeat region
LRR_8 PF13855 300 - 356 3.3e-08 Leucine rich repeat
LRR_14 PF23598 387 - 547 7e-06 Leucine-rich repeat region
LRR_4 PF12799 417 - 453 2.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 533 - 596 2e-06 Leucine-rich repeat region
LRR_8 PF13855 562 - 621 2.6e-10 Leucine rich repeat
Pkinase PF00069 734 - 994 3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 735 - 996 5e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 411
AasI GACNNNNNNGTC 1 cut(s) 1241
AccB1I GGYRCC 1 cut(s) 2698
AccB7I CCANNNNNTGG 1 cut(s) 1018
AccI GTMKAC 4 cut(s) 271, 1266, 1948, 2229
AccII CGCG 2 cut(s) 984, 2828
AccIII TCCGGA 2 cut(s) 623, 2219
AciI CCGC 8 cut(s) 913, 982, 984, 1346, 1722, 2552, 2826, 2948
AclI AACGTT 1 cut(s) 1811
AclWI GGATC 4 cut(s) 784, 1009, 2211, 2224
AcuI CTGAAG 8 cut(s) 44, 129, 888, 1241, 1251, 1502, 2867, 2907
AcyI GRCGYC 1 cut(s) 1242
AfaI GTAC 7 cut(s) 280, 767, 859, 1057, 1838, 2505, 2562
AfiI CCNNNNNNNGG 6 cut(s) 637, 659, 1018, 2023, 2024, 2916
AflIII ACRYGT 1 cut(s) 1557
AjiI CACGTC 2 cut(s) 1558, 1969
AjnI CCWGG 1 cut(s) 906
Alw21I GWGCWC 2 cut(s) 611, 2672
Alw26I GTCTC 7 cut(s) 60, 409, 1802, 1975, 2294, 2562, 2823
AlwI GGATC 4 cut(s) 784, 1009, 2211, 2224
Ama87I CYCGRG 1 cut(s) 1083
Aor13HI TCCGGA 2 cut(s) 623, 2219
AoxI GGCC 5 cut(s) 517, 909, 1867, 2709, 2957
ApaI GGGCCC 1 cut(s) 1871
ApeKI GCWGC 4 cut(s) 960, 2253, 2580, 3002
Asp700I GAANNNNTTC 3 cut(s) 120, 667, 2315
AspLEI GCGC 1 cut(s) 2336
AspS9I GGNCC 6 cut(s) 910, 1145, 1609, 1867, 1868, 3017
AsuHPI GGTGA 6 cut(s) 250, 373, 464, 1676, 2506, 2807
AsuNHI GCTAGC 3 cut(s) 137, 541, 2761
AvaI CYCGRG 1 cut(s) 1083
AvaII GGWCC 3 cut(s) 1145, 1609, 3017
BaeGI GKGCMC 1 cut(s) 1871
BamHI GGATCC 1 cut(s) 2216
BanI GGYRCC 1 cut(s) 2698
BanII GRGCYC 3 cut(s) 611, 1871, 2672
BarI GAAGNNNNNNTAC 2 cut(s) 2425, 2457
BauI CACGAG 1 cut(s) 1997
BbsI GAAGAC 3 cut(s) 440, 1239, 2466
Bbv12I GWGCWC 2 cut(s) 611, 2672
BbvI GCAGC 4 cut(s) 972, 2265, 2592, 3014
BceAI ACGGC 1 cut(s) 2882
BcgI CGANNNNNNTGC 2 cut(s) 1400, 1434
BciT130I CCWGG 1 cut(s) 908
BciVI GTATCC 1 cut(s) 1858
BclI TGATCA 2 cut(s) 352, 2775
BcoDI GTCTC 7 cut(s) 60, 409, 1802, 1975, 2294, 2562, 2823
BfaI CTAG 8 cut(s) 38, 138, 542, 902, 965, 2423, 2762, 2792
BfmI CTRYAG 2 cut(s) 1122, 3000
BfuI GTATCC 1 cut(s) 1858
BisI GCNGC 7 cut(s) 961, 985, 1723, 2254, 2552, 2581, 3003
BlpI GCTNAGC 1 cut(s) 2637
BlsI GCNGC 7 cut(s) 962, 986, 1724, 2255, 2553, 2582, 3004
Bme1390I CCNGG 1 cut(s) 908
Bme18I GGWCC 3 cut(s) 1145, 1609, 3017
BmeT110I CYCGRG 1 cut(s) 1083
BmgBI CACGTC 2 cut(s) 1558, 1969
BmgT120I GGNCC 6 cut(s) 910, 1145, 1609, 1867, 1868, 3017
BmiI GGNNCC 7 cut(s) 931, 1205, 1443, 1869, 1870, 2218, 2700
BmrFI CCNGG 1 cut(s) 908
BmsI GCATC 1 cut(s) 2545
BmtI GCTAGC 3 cut(s) 141, 545, 2765
BpiI GAAGAC 3 cut(s) 440, 1239, 2466
Bpu10I CCTNAGC 1 cut(s) 1271
Bpu1102I GCTNAGC 1 cut(s) 2637
BpuEI CTTGAG 3 cut(s) 492, 976, 2470
BsaHI GRCGYC 1 cut(s) 1242
BsaI GGTCTC 1 cut(s) 1802
BsaJI CCNNGG 3 cut(s) 753, 982, 1446
BsaWI WCCGGW 4 cut(s) 623, 854, 1793, 2219
Bsc4I CCNNNNNNNGG 6 cut(s) 637, 659, 1018, 2023, 2024, 2916
Bse1I ACTGG 2 cut(s) 1366, 2772
Bse3DI GCAATG 2 cut(s) 305, 2910
BseAI TCCGGA 2 cut(s) 623, 2219
BseBI CCWGG 1 cut(s) 908
BseDI CCNNGG 3 cut(s) 753, 982, 1446
BseGI GGATG 5 cut(s) 183, 1872, 2807, 2822, 2857
BseLI CCNNNNNNNGG 6 cut(s) 637, 659, 1018, 2023, 2024, 2916
BseMI GCAATG 2 cut(s) 305, 2910
BseMII CTCAG 7 cut(s) 243, 357, 587, 737, 1368, 1533, 2993
BseNI ACTGG 2 cut(s) 1366, 2772
BseSI GKGCMC 1 cut(s) 1871
BseXI GCAGC 4 cut(s) 972, 2265, 2592, 3014
Bsh1236I CGCG 2 cut(s) 984, 2828
BshFI GGCC 5 cut(s) 519, 911, 1869, 2711, 2959
BshNI GGYRCC 1 cut(s) 2698
BsiHKAI GWGCWC 2 cut(s) 611, 2672
BsiHKCI CYCGRG 1 cut(s) 1083
BsiSI CCGG 4 cut(s) 624, 855, 1794, 2220
BslFI GGGAC 1 cut(s) 1326
BslI CCNNNNNNNGG 6 cut(s) 637, 659, 1018, 2023, 2024, 2916
BsmAI GTCTC 7 cut(s) 60, 409, 1802, 1975, 2294, 2562, 2823
BsmBI CGTCTC 2 cut(s) 1975, 2823
BsmFI GGGAC 1 cut(s) 1326
BsmI GAATGC 4 cut(s) 187, 1532, 1827, 2938
BsnI GGCC 5 cut(s) 519, 911, 1869, 2711, 2959
Bso31I GGTCTC 1 cut(s) 1802
BsoBI CYCGRG 1 cut(s) 1083
Bsp120I GGGCCC 1 cut(s) 1867
Bsp1286I GDGCHC 3 cut(s) 611, 1871, 2672
Bsp13I TCCGGA 2 cut(s) 623, 2219
Bsp1407I TGTACA 4 cut(s) 765, 1836, 2503, 2560
Bsp143I GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
Bsp1720I GCTNAGC 1 cut(s) 2637
Bsp19I CCATGG 1 cut(s) 753
BspACI CCGC 8 cut(s) 913, 982, 984, 1346, 1722, 2552, 2826, 2948
BspANI GGCC 5 cut(s) 519, 911, 1869, 2711, 2959
BspCNI CTCAG 7 cut(s) 242, 358, 588, 736, 1369, 1532, 2992
BspEI TCCGGA 2 cut(s) 623, 2219
BspFNI CGCG 2 cut(s) 984, 2828
BspHI TCATGA 1 cut(s) 2539
BspLI GGNNCC 7 cut(s) 931, 1205, 1443, 1869, 1870, 2218, 2700
BspMAI CTGCAG 2 cut(s) 1126, 3004
BspOI GCTAGC 3 cut(s) 141, 545, 2765
BspPI GGATC 4 cut(s) 784, 1009, 2211, 2224
BspT107I GGYRCC 1 cut(s) 2698
BspTNI GGTCTC 1 cut(s) 1802
BsrDI GCAATG 2 cut(s) 305, 2910
BsrGI TGTACA 4 cut(s) 765, 1836, 2503, 2560
BsrI ACTGG 2 cut(s) 1366, 2772
BssECI CCNNGG 3 cut(s) 753, 982, 1446
BssMI GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
BssNAI GTATAC 1 cut(s) 272
BssNI GRCGYC 1 cut(s) 1242
BssSI CACGAG 1 cut(s) 1997
BssT1I CCWWGG 2 cut(s) 753, 1446
Bst1107I GTATAC 1 cut(s) 272
Bst2BI CACGAG 1 cut(s) 1997
Bst2UI CCWGG 1 cut(s) 908
Bst4CI ACNGT 4 cut(s) 85, 1317, 1695, 2526
Bst6I CTCTTC 3 cut(s) 63, 864, 946
BstACI GRCGYC 1 cut(s) 1242
BstAPI GCANNNNNTGC 1 cut(s) 2180
BstAUI TGTACA 4 cut(s) 765, 1836, 2503, 2560
BstDSI CCRYGG 2 cut(s) 753, 982
BstEII GGTNACC 1 cut(s) 2725
BstENI CCTNNNNNAGG 1 cut(s) 657
BstF5I GGATG 5 cut(s) 183, 1872, 2807, 2822, 2857
BstFNI CGCG 2 cut(s) 984, 2828
BstHHI GCGC 1 cut(s) 2336
BstKTI GATC 8 cut(s) 331, 355, 372, 792, 1004, 2166, 2219, 2778
BstMAI GTCTC 7 cut(s) 60, 409, 1802, 1975, 2294, 2562, 2823
BstMBI GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
BstNI CCWGG 1 cut(s) 908
BstNSI RCATGY 2 cut(s) 2536, 2934
BstPI GGTNACC 1 cut(s) 2725
BstSCI CCNGG 1 cut(s) 906
BstSFI CTRYAG 2 cut(s) 1122, 3000
BstSLI GKGCMC 1 cut(s) 1871
BstUI CGCG 2 cut(s) 984, 2828
BstV1I GCAGC 4 cut(s) 972, 2265, 2592, 3014
BstV2I GAAGAC 3 cut(s) 440, 1239, 2466
BstX2I RGATCY 1 cut(s) 2216
BstXI CCANNNNNNTGG 2 cut(s) 998, 1453
BstYI RGATCY 1 cut(s) 2216
BstZ17I GTATAC 1 cut(s) 272
BsuI GTATCC 1 cut(s) 1858
BsuRI GGCC 5 cut(s) 519, 911, 1869, 2711, 2959
BtgI CCRYGG 2 cut(s) 753, 982
BtgZI GCGATG 1 cut(s) 2643
BtrI CACGTC 2 cut(s) 1558, 1969
BtsCI GGATG 5 cut(s) 183, 1872, 2807, 2822, 2857
BtsI GCAGTG 2 cut(s) 2271, 2631
BtsIMutI CAGTG 7 cut(s) 105, 1322, 1536, 2271, 2522, 2631, 2765
CciI TCATGA 1 cut(s) 2539
CfoI GCGC 1 cut(s) 2336
Cfr13I GGNCC 6 cut(s) 910, 1145, 1609, 1867, 1868, 3017
Cfr42I CCGCGG 1 cut(s) 985
CseI GACGC 2 cut(s) 1048, 1231
Csp6I GTAC 7 cut(s) 279, 766, 858, 1056, 1837, 2504, 2561
CviQI GTAC 7 cut(s) 279, 766, 858, 1056, 1837, 2504, 2561
DpnI GATC 8 cut(s) 330, 354, 371, 791, 1003, 2165, 2218, 2777
DpnII GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
DraI TTTAAA 1 cut(s) 1617
DrdI GACNNNNNNGTC 1 cut(s) 1241
DseDI GACNNNNNNGTC 1 cut(s) 1241
Eam1104I CTCTTC 3 cut(s) 63, 864, 946
EarI CTCTTC 3 cut(s) 63, 864, 946
Ecl136II GAGCTC 2 cut(s) 609, 2670
Eco130I CCWWGG 2 cut(s) 753, 1446
Eco24I GRGCYC 3 cut(s) 611, 1871, 2672
Eco31I GGTCTC 1 cut(s) 1802
Eco32I GATATC 1 cut(s) 2107
Eco47I GGWCC 3 cut(s) 1145, 1609, 3017
Eco53kI GAGCTC 2 cut(s) 609, 2670
Eco57I CTGAAG 8 cut(s) 44, 129, 888, 1241, 1251, 1502, 2867, 2907
Eco88I CYCGRG 1 cut(s) 1083
Eco91I GGTNACC 1 cut(s) 2725
EcoICRI GAGCTC 2 cut(s) 609, 2670
EcoNI CCTNNNNNAGG 1 cut(s) 657
EcoO109I RGGNCCY 2 cut(s) 1867, 1868
EcoO65I GGTNACC 1 cut(s) 2725
EcoRI GAATTC 1 cut(s) 1523
EcoRII CCWGG 1 cut(s) 906
EcoRV GATATC 1 cut(s) 2107
EcoT14I CCWWGG 2 cut(s) 753, 1446
EcoT22I ATGCAT 1 cut(s) 2538
EcoT38I GRGCYC 3 cut(s) 611, 1871, 2672
ErhI CCWWGG 2 cut(s) 753, 1446
Esp3I CGTCTC 2 cut(s) 1975, 2823
FaqI GGGAC 1 cut(s) 1326
FauI CCCGC 2 cut(s) 920, 1339
FauNDI CATATG 3 cut(s) 322, 1307, 2168
FbaI TGATCA 2 cut(s) 352, 2775
FblI GTMKAC 4 cut(s) 271, 1266, 1948, 2229
Fnu4HI GCNGC 7 cut(s) 961, 985, 1723, 2254, 2552, 2581, 3003
FokI GGATG 5 cut(s) 190, 1859, 2794, 2809, 2864
FriOI GRGCYC 3 cut(s) 611, 1871, 2672
Fsp4HI GCNGC 7 cut(s) 961, 985, 1723, 2254, 2552, 2581, 3003
FspBI CTAG 8 cut(s) 38, 138, 542, 902, 965, 2423, 2762, 2792
GlaI GCGC 1 cut(s) 2335
GluI GCNGC 7 cut(s) 961, 985, 1723, 2254, 2552, 2581, 3003
HaeIII GGCC 5 cut(s) 519, 911, 1869, 2711, 2959
HapII CCGG 4 cut(s) 624, 855, 1794, 2220
HgaI GACGC 2 cut(s) 1048, 1231
HhaI GCGC 1 cut(s) 2336
Hin1I GRCGYC 1 cut(s) 1242
Hin6I GCGC 1 cut(s) 2334
HinP1I GCGC 1 cut(s) 2334
HincII GTYRAC 2 cut(s) 244, 1038
HindII GTYRAC 2 cut(s) 244, 1038
HindIII AAGCTT 3 cut(s) 1159, 1355, 2639
HinfI GANTC 9 cut(s) 898, 1024, 1188, 1252, 1423, 1771, 2189, 2647, 2654
HpaII CCGG 4 cut(s) 624, 855, 1794, 2220
HphI GGTGA 6 cut(s) 250, 373, 464, 1676, 2506, 2807
HpyAV CCTTC 8 cut(s) 479, 1193, 1907, 1916, 2203, 2305, 2716, 2842
HpyCH4III ACNGT 4 cut(s) 85, 1317, 1695, 2526
HpyCH4IV ACGT 5 cut(s) 1557, 1811, 1845, 1968, 2742
HpySE526I ACGT 5 cut(s) 1557, 1811, 1845, 1968, 2742
Hsp92I GRCGYC 1 cut(s) 1242
HspAI GCGC 1 cut(s) 2334
Kpn2I TCCGGA 2 cut(s) 623, 2219
Ksp22I TGATCA 2 cut(s) 352, 2775
KspI CCGCGG 1 cut(s) 985
Kzo9I GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
LmnI GCTCC 4 cut(s) 199, 1529, 2667, 2675
Lsp1109I GCAGC 4 cut(s) 972, 2265, 2592, 3014
LweI GCATC 1 cut(s) 2545
MaeI CTAG 8 cut(s) 38, 138, 542, 902, 965, 2423, 2762, 2792
MaeII ACGT 5 cut(s) 1557, 1811, 1845, 1968, 2742
MaeIII GTNAC 6 cut(s) 895, 1689, 1709, 1901, 2725, 2738
MalI GATC 8 cut(s) 330, 354, 371, 791, 1003, 2165, 2218, 2777
MboI GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
MfeI CAATTG 2 cut(s) 602, 2556
MflI RGATCY 1 cut(s) 2216
MhlI GDGCHC 3 cut(s) 611, 1871, 2672
MlyI GAGTC 4 cut(s) 892, 1197, 2183, 2648
Mph1103I ATGCAT 1 cut(s) 2538
MroI TCCGGA 2 cut(s) 623, 2219
MroXI GAANNNNTTC 3 cut(s) 120, 667, 2315
MseI TTAA 8 cut(s) 251, 525, 1328, 1616, 1703, 2801, 3045, 3052
MslI CAYNNNNRTG 4 cut(s) 477, 1306, 2139, 2827
MspA1I CMGCKG 2 cut(s) 233, 984
MspI CCGG 4 cut(s) 624, 855, 1794, 2220
MspR9I CCNGG 1 cut(s) 908
MssI GTTTAAAC 1 cut(s) 1617
MunI CAATTG 2 cut(s) 602, 2556
Mva1269I GAATGC 4 cut(s) 187, 1532, 1827, 2938
MvaI CCWGG 1 cut(s) 908
MvnI CGCG 2 cut(s) 984, 2828
NcoI CCATGG 1 cut(s) 753
NdeI CATATG 3 cut(s) 322, 1307, 2168
NdeII GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
NheI GCTAGC 3 cut(s) 137, 541, 2761
NlaIV GGNNCC 7 cut(s) 931, 1205, 1443, 1869, 1870, 2218, 2700
NmuCI GTSAC 4 cut(s) 895, 1689, 1901, 2738
NsiI ATGCAT 1 cut(s) 2538
NspI RCATGY 2 cut(s) 2536, 2934
PaeI GCATGC 1 cut(s) 2934
PaeR7I CTCGAG 1 cut(s) 1083
PagI TCATGA 1 cut(s) 2539
PctI GAATGC 4 cut(s) 187, 1532, 1827, 2938
PdmI GAANNNNTTC 3 cut(s) 120, 667, 2315
PfeI GAWTC 5 cut(s) 1024, 1252, 1423, 1771, 2647
PflFI GACNNNGTC 1 cut(s) 1317
PflMI CCANNNNNTGG 1 cut(s) 1018
PkrI GCNGC 7 cut(s) 962, 986, 1724, 2255, 2553, 2582, 3004
PleI GAGTC 4 cut(s) 892, 1196, 2183, 2648
PmeI GTTTAAAC 1 cut(s) 1617
PpsI GAGTC 4 cut(s) 892, 1196, 2183, 2648
PsiI TTATAA 1 cut(s) 411
Psp124BI GAGCTC 2 cut(s) 611, 2672
Psp1406I AACGTT 1 cut(s) 1811
Psp6I CCWGG 1 cut(s) 906
PspEI GGTNACC 1 cut(s) 2725
PspGI CCWGG 1 cut(s) 906
PspN4I GGNNCC 7 cut(s) 931, 1205, 1443, 1869, 1870, 2218, 2700
PspOMI GGGCCC 1 cut(s) 1867
PspPI GGNCC 6 cut(s) 910, 1145, 1609, 1867, 1868, 3017
PstI CTGCAG 2 cut(s) 1126, 3004
PsuI RGATCY 1 cut(s) 2216
PsyI GACNNNGTC 1 cut(s) 1317
PvuII CAGCTG 1 cut(s) 233
RsaI GTAC 7 cut(s) 280, 767, 859, 1057, 1838, 2505, 2562
RsaNI GTAC 7 cut(s) 279, 766, 858, 1056, 1837, 2504, 2561
RseI CAYNNNNRTG 4 cut(s) 477, 1306, 2139, 2827
SacI GAGCTC 2 cut(s) 611, 2672
SacII CCGCGG 1 cut(s) 985
SaqAI TTAA 8 cut(s) 251, 525, 1328, 1616, 1703, 2801, 3045, 3052
SatI GCNGC 7 cut(s) 961, 985, 1723, 2254, 2552, 2581, 3003
Sau3AI GATC 8 cut(s) 328, 352, 369, 789, 1001, 2163, 2216, 2775
Sau96I GGNCC 6 cut(s) 910, 1145, 1609, 1867, 1868, 3017
SchI GAGTC 4 cut(s) 892, 1197, 2183, 2648
ScrFI CCNGG 1 cut(s) 908
SduI GDGCHC 3 cut(s) 611, 1871, 2672
SfaNI GCATC 1 cut(s) 2545
SfcI CTRYAG 2 cut(s) 1122, 3000
Sfr274I CTCGAG 1 cut(s) 1083
Sfr303I CCGCGG 1 cut(s) 985
SgrBI CCGCGG 1 cut(s) 985
SinI GGWCC 3 cut(s) 1145, 1609, 3017
SlaI CTCGAG 1 cut(s) 1083
SmiMI CAYNNNNRTG 4 cut(s) 477, 1306, 2139, 2827
SmlI CTYRAG 4 cut(s) 507, 955, 1083, 2449
SmoI CTYRAG 4 cut(s) 507, 955, 1083, 2449
SphI GCATGC 1 cut(s) 2934
SsiI CCGC 8 cut(s) 913, 982, 984, 1346, 1722, 2552, 2826, 2948
SspMI CTAG 8 cut(s) 38, 138, 542, 902, 965, 2423, 2762, 2792
SstI GAGCTC 2 cut(s) 611, 2672
StyD4I CCNGG 1 cut(s) 906
StyI CCWWGG 2 cut(s) 753, 1446
TaaI ACNGT 4 cut(s) 85, 1317, 1695, 2526
TaiI ACGT 5 cut(s) 1560, 1814, 1848, 1971, 2745
TaqI TCGA 6 cut(s) 788, 1084, 1410, 1545, 2356, 2595
TatI WGTACW 4 cut(s) 765, 1836, 2503, 2560
TauI GCSGC 3 cut(s) 987, 1725, 2554
TfiI GAWTC 5 cut(s) 1024, 1252, 1423, 1771, 2647
Tru1I TTAA 8 cut(s) 251, 525, 1328, 1616, 1703, 2801, 3045, 3052
Tru9I TTAA 8 cut(s) 251, 525, 1328, 1616, 1703, 2801, 3045, 3052
TscAI CASTG 7 cut(s) 112, 1322, 1543, 2271, 2529, 2638, 2772
TseFI GTSAC 4 cut(s) 895, 1689, 1901, 2738
TseI GCWGC 4 cut(s) 960, 2253, 2580, 3002
Tsp45I GTSAC 4 cut(s) 895, 1689, 1901, 2738
TspGWI ACGGA 3 cut(s) 1181, 1354, 1601
TspRI CASTG 7 cut(s) 112, 1322, 1543, 2271, 2529, 2638, 2772
Tth111I GACNNNGTC 1 cut(s) 1317
Van91I CCANNNNNTGG 1 cut(s) 1018
VpaK11BI GGWCC 3 cut(s) 1145, 1609, 3017
XagI CCTNNNNNAGG 1 cut(s) 657
XbaI TCTAGA 2 cut(s) 901, 2422
XceI RCATGY 2 cut(s) 2536, 2934
XcmI CCANNNNNNNNNTGG 1 cut(s) 204
XhoI CTCGAG 1 cut(s) 1083
XmiI GTMKAC 4 cut(s) 271, 1266, 1948, 2229
XmnI GAANNNNTTC 3 cut(s) 120, 667, 2315
XspI CTAG 8 cut(s) 38, 138, 542, 902, 965, 2423, 2762, 2792
Zsp2I ATGCAT 1 cut(s) 2538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.