Rw3G026300

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
35977619 .. 35998939
21321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G026300.1

Sequence Viewer

Length: 3606 bp
ATGAAAGCAGTTCAGGAGACTCCACTGCGTCTCCTCCTCCTCGATATTTTCTTGCTCTTTTTGCTTCCATTGGAGGCCACATCATCACAAAGAATACATGCTGAAGCTCTCATACAATGGAAGAACAGCTTTACTTCTTCACCACCTTCTCTGAATTCATGGTCGCTCACAAACCTAAACAACCTGTGCAACTGGCCTGCCATTGTCTGCAACCACAATACACAAACAGTGTCTGAAATTCACCTTGCAAACTTCAACATCACTGCAGCACTAACAGAGTTCAACTTCAACAAGTTTCTCGATCTCACCCATCTCAACCTCAATGGCAACAATTTCTCAGGGCCTATACCATCTGCCATTGGCAACCTCACCAAGCTCACAACCTTGGATTTGGGAAACAATATCTTGGAACGAGAAGTGCCTGCAGAAATGGGCAAGTTAACGGAGCTTCAGTTTCTAAGTCTCTACAACAACTCTCTCAATGGTACCATTCCCTATCAGCTGGACAATCTCAAAAAGGTACAATATTTGCTTCTTGGAAGGAACAAGTTAGACACTCCCGACTGGTCTAAATTTTCAGGCTTTCCTTTCTTAACATACCTTGATCTTTGTCTGAACAATTTGGATTTAGAATTCCCAGAATTTATATCTGAATGTAAGAGCTTGACCTTCCTGGATTTGTCTGAAAATCTTTTGACTGGCCAAATACCGAAATTGGTAGTTACCAACCTGGTCAAGCTTGAATCTCTCAATCTCACCGATAACCGATTCCAAGGGCCAATGCCATATAACTTTCCCAACCTCAAACACCTTTATTTGGAATCGAACGACTTTAGTGGTCCAATTCCTGAATATATTGGTTTGATATCTGGTCTTCAATTTATTAACCTTTATGACAATTCCTTTGAAGGCAAAATCCCATCCTCTGTAGGCCAACTCAGGGAGCTTCAGCACCTCGATCTTCGAGAGAATTCCTTGAACTTACCAATGTACTTACAGAACTCTTCAATCCCTTTTGAGCTTGGTAATTGTACCAACCTCACTTATTTGGCCTTGGCTGCAAATAAACTCACTGGGGAACTGCCTCTGTCCCTGTCCAATCTCAACAGCTTGAGGGAGTTGGGGTTATCTGATAATCTATTTACCGGGCCAATCTTGCCTTCTTTAATCTCCAATTGGACTGAATTGATCTCTTTGCAACTCCAAAACAATAGCTTTAGTGGGAATATTCCACCAGAAATTGGCCTGTTGACAAAACTCAATTTCCTCTTTCTGTACAACAACAATTTCTCTGGATCAATTCCCTCAGAGATAGGAAACTTGAAAGTGTTGAAAGATTTAAGCATTCACGACAACAATCTCAGCGGAACAATCCCTCCAGAGATTGGAAACATGAGTTCCATTGTTTACTTTGATGTCTACGGAAACCTACTTGAAGGGGAGTTGCCAAAAACTATTTCTCACCTCAGAAAACTGGAGTGGTTTTCCGTTTTCACTAATAGGTTTTCGGGGACCATTCCCAGTGATTTCGGGAAGTATAGTCCTAACTTGAGATTTGTTAGTTTCGCATGGAACAGCTTCTTCTCTGGAGAATTGCCTCCCGAGTTGTGTAGTGGATTTGCCTTGCAAGAATTGAAAGTGCACTCGAACAACTTCACAGGGTCATTGCCTGAGTGCTTGAGAAATTGTTCTGCATTAAAATATGTCCGGCTTGAAGTAAACCACTTCACCGGAAACATTAACAATGCATTTGGTGTTCATCCCCATCTTGAAGTAATTCATCTTAGTCACAACAAGTTCGTTGGTCAACTCTCACCACAATGGGGAGAATGCAAAAACATCACGGATATGCAAATGGACGGAAATAGAATTTCTGGGCAAATCCCACCTGAGCTTGGTCAGCTGACACAATTGCAGTACCTAAACCTAGCCTCTAATGACTTCTGTGGGGAGTTTCCAGTTTCCATTGGGAATTCAAGCTTGTTGTTCACTCTTAATCTCAGCCGGAACAACATGATGGGAACTATTCCTCATGTTCTCGGCAAATTGACTAAGCTCGAGTGTCTTGATTTGTCTGATAATAATTTTACAGGGGTATTACCAGCCGACCCTGGGACGTTTGAGCGTTTAACAAGCTTGATCATAAGCCACAACAATTTATCAGGTGAGATACCAGAAGAGATTGGTAATCTACCCCTACGGTACTTCTTGGACCTCAGCAGCAATTCATTCTCGGGATCAGTACCATCAAACCTTGCCAAGCTCATAATGCTGGAGATTCTTAATGTCTCACATAACCAACTCTCAGGGAACATCCCAACAACATATTCTAGAATGGTTAGTCTTCTCGTCATTGATTTTTCTTACAACAACTTGACAGGTCCAATCCCAACTGGTAGCATTTTCCAAAAGAAGCTTCCGAATAATGCTTTCATTGGAAATAGTGGTTTGTGTGGTGAAACAGAGGGACTAACTCCATGCACTTCGGGTCCCAAAAAATCCAACAAGAGAATTCTTGTTGGCGTCCTTGTTCCCATTTGTGGTTTATTGCTAATGGTGACCATATCTACTTTAATCCTTAAGTTCTGCAAGAAATCAAAGCTTGGAGAAATCGATCATCCTAAGGTGTCTAAAAGTTTTGATTCAATTATTTGGGGAAGACATGGTAAACTTACATTTTCTGAAATCATCACTGCCACCGAGAACTTTGATGAAAAGTACCTCATTGGAACAGGAGGTTTTGGAAGTGTCTACAAGGCTGTGTTGGACAGAGGCAAAGTCGTTGCAGTTAAGAAATTGAATATGTCAGCAGATTCTAGTGACGACATTCCAGAATTGAATCGCAAGAGTTTTGAGAATGAGATAAGAACTTTGACAGAAGTGATGCACAGAAATGTAATAAAACTTTATGGGTTCTGCTCCTGGAAGGGGTGCTTGTACTTGGTGTATGAATATGCACAGAGAGGCAGTTTGAAAATGGTGTTGTATGGAGTGGAGGGCGAAGCAGAAGTACTTGGCTGGGGCACAAGGTTTAAAATTATGCAAGGAATAGCTCATGCTATTTCTCACTTGCATAATGACTGCTCTCACCCAATCGTTCACCGCGACATAACTTTGAGCAACATATTACTAGATCAGGATTTCGTGCCACGCCTATCAGACTTTGGAACAGCAAGACTACTGAGCTCAGATTCGTCAAACTGGACTGCTGTAGCAGGGTCTTATGGCTACATGGCTCCAGAGCTCGCATTCACAATGCAAGCGACAGATAAGTGTGATGTATACAGCTTTGGAGTGGTAGCATTAGAAATCATGATGGGAAGGCATCCAGGGGAGCTACTGATTTCTCTATCGGAAAATGGAGATATGCTTTTGAAGGATTTGCTAGACCAACGACTTCGGTCGCCTTCAAGTCAATTAGCAGGGCGAGTGGTTTCCATGGTAACATTGGCCTTGGCCTGCATCAGCACGAATCCTGATTCACGACCCACCATGCATTATGTGGCAAAAGAACTATCATCCACCAAGACCTGGACTTGCCTCTCTGAGCCGTTGGGCACGATAACCATCAATAAGTTGGCAAGTTGTCATAAGACTCATAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1201

Amino Acids

133.29

Weight (kDa)

5.88

Isoelectric Point (pI)

34.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 96 - 179 5.2e-08 Leucine-rich repeat region
LRR_8 PF13855 173 - 232 2e-06 Leucine rich repeat
LRR_14 PF23598 267 - 374 8.3e-06 Leucine-rich repeat region
LRR_14 PF23598 341 - 449 4.4e-07 Leucine-rich repeat region
LRR_14 PF23598 413 - 608 5e-08 Leucine-rich repeat region
LRR_14 PF23598 631 - 713 6.4e-08 Leucine-rich repeat region
Pkinase PF00069 905 - 1169 2.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 908 - 1172 2.7e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 485
AccB1I GGYRCC 1 cut(s) 485
AccB7I CCANNNNNTGG 3 cut(s) 1241, 1385, 3531
AccI GTMKAC 3 cut(s) 1419, 2751, 3282
AccII CGCG 1 cut(s) 3105
AciI CCGC 2 cut(s) 1365, 3103
AclWI GGATC 2 cut(s) 1303, 2245
AcoI YGGCCR 1 cut(s) 700
AcsI RAATTY 9 cut(s) 154, 237, 572, 632, 641, 970, 1869, 1972, 2511
AcuI CTGAAG 3 cut(s) 123, 434, 932
AcyI GRCGYC 1 cut(s) 2523
AflII CTTAAG 1 cut(s) 2579
AjnI CCWGG 6 cut(s) 672, 729, 2110, 2921, 3328, 3530
AjuI GAANNNNNNNTTGG 8 cut(s) 1144, 1176, 1441, 1473, 2311, 2343, 2400, 2432
AloI GAACNNNNNNTCC 2 cut(s) 1360, 1392
Alw21I GWGCWC 3 cut(s) 1644, 3188, 3246
Alw26I GTCTC 4 cut(s) 11, 35, 467, 2293
Alw44I GTGCAC 1 cut(s) 1640
AlwI GGATC 2 cut(s) 1303, 2245
AlwNI CAGNNNCTG 1 cut(s) 233
Ama87I CYCGRG 3 cut(s) 1601, 2057, 2233
ApaLI GTGCAC 1 cut(s) 1640
ApeKI GCWGC 3 cut(s) 266, 1058, 2220
ApoI RAATTY 9 cut(s) 154, 237, 572, 632, 641, 970, 1869, 1972, 2511
ArsI GACNNNNNNTTYG 2 cut(s) 887, 919
Asp700I GAANNNNTTC 4 cut(s) 1577, 1652, 1687, 1776
Asp718I GGTACC 1 cut(s) 485
AspS9I GGNCC 8 cut(s) 341, 776, 839, 1148, 1512, 2212, 2381, 2489
AsuC2I CCSGG 1 cut(s) 1147
AvaI CYCGRG 3 cut(s) 1601, 2057, 2233
AvaII GGWCC 5 cut(s) 839, 1512, 2212, 2381, 2489
AxyI CCTNAGG 1 cut(s) 2622
BaeGI GKGCMC 3 cut(s) 1644, 3026, 3560
BalI TGGCCA 1 cut(s) 702
BanI GGYRCC 1 cut(s) 485
BanII GRGCYC 2 cut(s) 3188, 3246
BarI GAAGNNNNNNTAC 4 cut(s) 96, 128, 2994, 3026
BbsI GAAGAC 3 cut(s) 866, 2336, 2665
Bbv12I GWGCWC 3 cut(s) 1644, 3188, 3246
BbvCI CCTCAGC 1 cut(s) 2216
BbvI GCAGC 3 cut(s) 278, 1045, 2232
BccI CCATC 8 cut(s) 318, 358, 928, 1773, 2011, 2254, 3310, 3575
BceAI ACGGC 1 cut(s) 3535
BciT130I CCWGG 6 cut(s) 674, 731, 2112, 2923, 3330, 3532
BclI TGATCA 1 cut(s) 2139
BcnI CCSGG 1 cut(s) 1147
BcoDI GTCTC 4 cut(s) 11, 35, 467, 2293
BfaI CTAG 6 cut(s) 1928, 2331, 2817, 3131, 3386, 3604
BfmI CTRYAG 4 cut(s) 264, 423, 927, 3210
BfrI CTTAAG 1 cut(s) 2579
BisI GCNGC 3 cut(s) 267, 1059, 2221
BlsI GCNGC 3 cut(s) 268, 1060, 2222
BmcAI AGTACT 1 cut(s) 3012
Bme1390I CCNGG 7 cut(s) 674, 731, 1147, 2112, 2923, 3330, 3532
Bme18I GGWCC 5 cut(s) 839, 1512, 2212, 2381, 2489
BmeT110I CYCGRG 3 cut(s) 1601, 2057, 2233
BmgT120I GGNCC 8 cut(s) 341, 776, 839, 1148, 1512, 2212, 2381, 2489
BmiI GGNNCC 5 cut(s) 487, 1513, 2490, 2491, 3237
BmrFI CCNGG 7 cut(s) 674, 731, 1147, 2112, 2923, 3330, 3532
BmrI ACTGGG 2 cut(s) 1083, 1515
BmsI GCATC 3 cut(s) 2874, 3334, 3471
BmuI ACTGGG 2 cut(s) 1083, 1515
BoxI GACNNNNGTC 1 cut(s) 3400
BpiI GAAGAC 3 cut(s) 866, 2336, 2665
BpmI CTGGAG 5 cut(s) 1362, 1496, 1608, 2294, 3222
Bpu10I CCTNAGC 2 cut(s) 1890, 2216
BpuEI CTTGAG 3 cut(s) 1132, 1570, 1699
BpuMI CCSGG 1 cut(s) 1147
Bsa29I ATCGAT 1 cut(s) 2613
BsaBI GATNNNNATC 1 cut(s) 3566
BsaHI GRCGYC 1 cut(s) 2523
BsaJI CCNNGG 8 cut(s) 384, 772, 1053, 2110, 2111, 3329, 3438, 3453
BsaWI WCCGGW 1 cut(s) 1730
BsaXI ACNNNNNCTCC 8 cut(s) 15, 45, 437, 467, 1109, 1139, 1360, 1390
Bse1I ACTGG 9 cut(s) 197, 569, 703, 1078, 1479, 1521, 1958, 2398, 3206
Bse21I CCTNAGG 1 cut(s) 2622
Bse3DI GCAATG 1 cut(s) 1664
Bse8I GATNNNNATC 1 cut(s) 3566
BseBI CCWGG 6 cut(s) 674, 731, 2112, 2923, 3330, 3532
BseCI ATCGAT 1 cut(s) 2613
BseDI CCNNGG 8 cut(s) 384, 772, 1053, 2110, 2111, 3329, 3438, 3453
BseGI GGATG 6 cut(s) 920, 1759, 2313, 2617, 3325, 3518
BseJI GATNNNNATC 1 cut(s) 3566
BseMI GCAATG 1 cut(s) 1664
BseNI ACTGG 9 cut(s) 197, 569, 703, 1078, 1479, 1521, 1958, 2398, 3206
BseRI GAGGAG 3 cut(s) 23, 26, 29
BseSI GKGCMC 3 cut(s) 1644, 3026, 3560
BseXI GCAGC 3 cut(s) 278, 1045, 2232
BseYI CCCAGC 1 cut(s) 3018
Bsh1236I CGCG 1 cut(s) 3105
Bsh1285I CGRYCG 1 cut(s) 3404
BshNI GGYRCC 1 cut(s) 485
BshVI ATCGAT 1 cut(s) 2613
BsiEI CGRYCG 1 cut(s) 3404
BsiHKAI GWGCWC 3 cut(s) 1644, 3188, 3246
BsiHKCI CYCGRG 3 cut(s) 1601, 2057, 2233
BsiSI CCGG 4 cut(s) 1146, 1708, 1731, 2005
BslFI GGGAC 5 cut(s) 1075, 1525, 2128, 2475, 2481
BsmAI GTCTC 4 cut(s) 11, 35, 467, 2293
BsmBI CGTCTC 1 cut(s) 35
BsmFI GGGAC 5 cut(s) 1075, 1525, 2128, 2475, 2481
BsmI GAATGC 3 cut(s) 1344, 1835, 3248
BsoBI CYCGRG 3 cut(s) 1601, 2057, 2233
Bsp1286I GDGCHC 5 cut(s) 1644, 3026, 3188, 3246, 3560
Bsp1407I TGTACA 1 cut(s) 1275
Bsp143I GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
Bsp19I CCATGG 1 cut(s) 3438
BspACI CCGC 2 cut(s) 1365, 3103
BspDI ATCGAT 1 cut(s) 2613
BspFNI CGCG 1 cut(s) 3105
BspHI TCATGA 1 cut(s) 3312
BspLI GGNNCC 5 cut(s) 487, 1513, 2490, 2491, 3237
BspMAI CTGCAG 2 cut(s) 268, 427
BspPI GGATC 2 cut(s) 1303, 2245
BspT107I GGYRCC 1 cut(s) 485
BspTI CTTAAG 1 cut(s) 2579
BsrDI GCAATG 1 cut(s) 1664
BsrGI TGTACA 1 cut(s) 1275
BsrI ACTGG 9 cut(s) 197, 569, 703, 1078, 1479, 1521, 1958, 2398, 3206
BssECI CCNNGG 8 cut(s) 384, 772, 1053, 2110, 2111, 3329, 3438, 3453
BssMI GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
BssNAI GTATAC 1 cut(s) 3283
BssNI GRCGYC 1 cut(s) 2523
BssT1I CCWWGG 5 cut(s) 384, 772, 1053, 3438, 3453
Bst1107I GTATAC 1 cut(s) 3283
Bst2UI CCWGG 6 cut(s) 674, 731, 2112, 2923, 3330, 3532
Bst4CI ACNGT 2 cut(s) 229, 2202
Bst6I CTCTTC 2 cut(s) 1009, 2172
BstACI GRCGYC 1 cut(s) 2523
BstAFI CTTAAG 1 cut(s) 2579
BstAUI TGTACA 1 cut(s) 1275
BstC8I GCNNGC 5 cut(s) 198, 423, 3246, 3261, 3460
BstDSI CCRYGG 1 cut(s) 3438
BstEII GGTNACC 1 cut(s) 2557
BstF5I GGATG 6 cut(s) 920, 1759, 2313, 2617, 3325, 3518
BstFNI CGCG 1 cut(s) 3105
BstKTI GATC 9 cut(s) 304, 607, 961, 1191, 1298, 2142, 2240, 2617, 3136
BstMAI GTCTC 4 cut(s) 11, 35, 467, 2293
BstMBI GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
BstMCI CGRYCG 1 cut(s) 3404
BstMWI GCNNNNNNNGC 5 cut(s) 61, 1058, 1156, 1900, 2269
BstNI CCWGG 6 cut(s) 674, 731, 2112, 2923, 3330, 3532
BstNSI RCATGY 1 cut(s) 101
BstPAI GACNNNNGTC 1 cut(s) 3400
BstPI GGTNACC 1 cut(s) 2557
BstSCI CCNGG 7 cut(s) 672, 729, 1145, 2110, 2921, 3328, 3530
BstSFI CTRYAG 4 cut(s) 264, 423, 927, 3210
BstSLI GKGCMC 3 cut(s) 1644, 3026, 3560
BstUI CGCG 1 cut(s) 3105
BstV1I GCAGC 3 cut(s) 278, 1045, 2232
BstV2I GAAGAC 3 cut(s) 866, 2336, 2665
BstZ17I GTATAC 1 cut(s) 3283
Bsu15I ATCGAT 1 cut(s) 2613
Bsu36I CCTNAGG 1 cut(s) 2622
BsuTUI ATCGAT 1 cut(s) 2613
BtgI CCRYGG 1 cut(s) 3438
BtsCI GGATG 6 cut(s) 920, 1759, 2313, 2617, 3325, 3518
BtsI GCAGTG 3 cut(s) 23, 261, 2691
BtsIMutI CAGTG 6 cut(s) 23, 234, 261, 1071, 1528, 2691
Cac8I GCNNGC 5 cut(s) 198, 423, 3246, 3261, 3460
CaiI CAGNNNCTG 1 cut(s) 233
CciI TCATGA 1 cut(s) 3312
Cfr13I GGNCC 8 cut(s) 341, 776, 839, 1148, 1512, 2212, 2381, 2489
ClaI ATCGAT 1 cut(s) 2613
CseI GACGC 2 cut(s) 17, 2512
CsiI ACCWGGT 1 cut(s) 729
DpnI GATC 9 cut(s) 303, 606, 960, 1190, 1297, 2141, 2239, 2616, 3135
DpnII GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
DraI TTTAAA 1 cut(s) 3034
EaeI YGGCCR 1 cut(s) 700
Eam1104I CTCTTC 2 cut(s) 1009, 2172
EarI CTCTTC 2 cut(s) 1009, 2172
Ecl136II GAGCTC 2 cut(s) 3186, 3244
Eco130I CCWWGG 5 cut(s) 384, 772, 1053, 3438, 3453
Eco24I GRGCYC 2 cut(s) 3188, 3246
Eco32I GATATC 1 cut(s) 867
Eco47I GGWCC 5 cut(s) 839, 1512, 2212, 2381, 2489
Eco53kI GAGCTC 2 cut(s) 3186, 3244
Eco57I CTGAAG 3 cut(s) 123, 434, 932
Eco81I CCTNAGG 1 cut(s) 2622
Eco88I CYCGRG 3 cut(s) 1601, 2057, 2233
Eco91I GGTNACC 1 cut(s) 2557
EcoICRI GAGCTC 2 cut(s) 3186, 3244
EcoO109I RGGNCCY 2 cut(s) 341, 2489
EcoO65I GGTNACC 1 cut(s) 2557
EcoRI GAATTC 5 cut(s) 154, 632, 970, 1972, 2511
EcoRII CCWGG 6 cut(s) 672, 729, 2110, 2921, 3328, 3530
EcoRV GATATC 1 cut(s) 867
EcoT14I CCWWGG 5 cut(s) 384, 772, 1053, 3438, 3453
EcoT22I ATGCAT 2 cut(s) 1750, 3498
EcoT38I GRGCYC 2 cut(s) 3188, 3246
ErhI CCWWGG 5 cut(s) 384, 772, 1053, 3438, 3453
Esp3I CGTCTC 1 cut(s) 35
FalI AAGNNNNNCTT 4 cut(s) 113, 145, 2918, 2950
FaqI GGGAC 5 cut(s) 1075, 1525, 2128, 2475, 2481
FbaI TGATCA 1 cut(s) 2139
FblI GTMKAC 3 cut(s) 1419, 2751, 3282
Fnu4HI GCNGC 3 cut(s) 267, 1059, 2221
FokI GGATG 6 cut(s) 907, 1746, 2300, 2604, 3312, 3505
FriOI GRGCYC 2 cut(s) 3188, 3246
Fsp4HI GCNGC 3 cut(s) 267, 1059, 2221
FspBI CTAG 6 cut(s) 1928, 2331, 2817, 3131, 3386, 3604
GluI GCNGC 3 cut(s) 267, 1059, 2221
GsaI CCCAGC 1 cut(s) 3022
GsuI CTGGAG 5 cut(s) 1362, 1496, 1608, 2294, 3222
HapII CCGG 4 cut(s) 1146, 1708, 1731, 2005
HgaI GACGC 2 cut(s) 17, 2512
Hin1I GRCGYC 1 cut(s) 2523
HincII GTYRAC 3 cut(s) 441, 1251, 1808
HindII GTYRAC 3 cut(s) 441, 1251, 1808
HindIII AAGCTT 5 cut(s) 737, 1978, 2134, 2414, 2600
HpaI GTTAAC 1 cut(s) 441
HpaII CCGG 4 cut(s) 1146, 1708, 1731, 2005
HpyCH4III ACNGT 2 cut(s) 229, 2202
HpyCH4IV ACGT 1 cut(s) 2117
HpyF10VI GCNNNNNNNGC 5 cut(s) 61, 1058, 1156, 1900, 2269
HpySE526I ACGT 1 cut(s) 2117
Hsp92I GRCGYC 1 cut(s) 2523
KflI GGGWCCC 1 cut(s) 2489
KpnI GGTACC 1 cut(s) 489
Ksp22I TGATCA 1 cut(s) 2139
KspAI GTTAAC 1 cut(s) 441
Kzo9I GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
LmnI GCTCC 5 cut(s) 445, 943, 2924, 3241, 3334
Lsp1109I GCAGC 3 cut(s) 278, 1045, 2232
LweI GCATC 3 cut(s) 2874, 3334, 3471
MabI ACCWGGT 1 cut(s) 729
MaeI CTAG 6 cut(s) 1928, 2331, 2817, 3131, 3386, 3604
MaeII ACGT 1 cut(s) 2117
MaeIII GTNAC 5 cut(s) 721, 1787, 2557, 2819, 3442
MalI GATC 9 cut(s) 303, 606, 960, 1190, 1297, 2141, 2239, 2616, 3135
MboI GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
MboII GAAGA 9 cut(s) 129, 133, 866, 953, 996, 1573, 2189, 2336, 2670
MfeI CAATTG 2 cut(s) 1174, 1910
MhlI GDGCHC 5 cut(s) 1644, 3026, 3188, 3246, 3560
MlsI TGGCCA 1 cut(s) 702
MluNI TGGCCA 1 cut(s) 702
MlyI GAGTC 2 cut(s) 13, 3589
MmeI TCCRAC 2 cut(s) 2526, 2745
Mox20I TGGCCA 1 cut(s) 702
Mph1103I ATGCAT 2 cut(s) 1750, 3498
MroXI GAANNNNTTC 4 cut(s) 1577, 1652, 1687, 1776
MscI TGGCCA 1 cut(s) 702
MslI CAYNNNNRTG 3 cut(s) 1819, 1847, 2892
Msp20I TGGCCA 1 cut(s) 702
MspA1I CMGCKG 3 cut(s) 502, 1365, 1903
MspCI CTTAAG 1 cut(s) 2579
MspI CCGG 4 cut(s) 1146, 1708, 1731, 2005
MspR9I CCNGG 7 cut(s) 674, 731, 1147, 2112, 2923, 3330, 3532
MunI CAATTG 2 cut(s) 1174, 1910
Mva1269I GAATGC 3 cut(s) 1344, 1835, 3248
MvaI CCWGG 6 cut(s) 674, 731, 2112, 2923, 3330, 3532
MvnI CGCG 1 cut(s) 3105
MwoI GCNNNNNNNGC 5 cut(s) 61, 1058, 1156, 1900, 2269
NciI CCSGG 1 cut(s) 1147
NcoI CCATGG 1 cut(s) 3438
NdeII GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
NlaIV GGNNCC 5 cut(s) 487, 1513, 2490, 2491, 3237
NmeAIII GCCGAG 1 cut(s) 2019
NmuCI GTSAC 3 cut(s) 1787, 2557, 2819
NsiI ATGCAT 2 cut(s) 1750, 3498
NspI RCATGY 1 cut(s) 101
PaeR7I CTCGAG 1 cut(s) 2057
PagI TCATGA 1 cut(s) 3312
PasI CCCWGGG 1 cut(s) 2111
PcsI WCGNNNNNNNCGW 1 cut(s) 3102
PctI GAATGC 3 cut(s) 1344, 1835, 3248
PdmI GAANNNNTTC 4 cut(s) 1577, 1652, 1687, 1776
PflMI CCANNNNNTGG 3 cut(s) 1241, 1385, 3531
PfoI TCCNGGA 2 cut(s) 672, 2921
PkrI GCNGC 3 cut(s) 268, 1060, 2222
PleI GAGTC 2 cut(s) 13, 3589
PpsI GAGTC 2 cut(s) 13, 3589
PpuMI RGGWCCY 1 cut(s) 2489
PshAI GACNNNNGTC 1 cut(s) 3400
Psp124BI GAGCTC 2 cut(s) 3188, 3246
Psp5II RGGWCCY 1 cut(s) 2489
Psp6I CCWGG 6 cut(s) 672, 729, 2110, 2921, 3328, 3530
PspEI GGTNACC 1 cut(s) 2557
PspFI CCCAGC 1 cut(s) 3018
PspGI CCWGG 6 cut(s) 672, 729, 2110, 2921, 3328, 3530
PspN4I GGNNCC 5 cut(s) 487, 1513, 2490, 2491, 3237
PspPI GGNCC 8 cut(s) 341, 776, 839, 1148, 1512, 2212, 2381, 2489
PspPPI RGGWCCY 1 cut(s) 2489
PspXI VCTCGAGB 1 cut(s) 2057
PstI CTGCAG 2 cut(s) 268, 427
PstNI CAGNNNCTG 1 cut(s) 233
PvuII CAGCTG 2 cut(s) 502, 1903
RseI CAYNNNNRTG 3 cut(s) 1819, 1847, 2892
SacI GAGCTC 2 cut(s) 3188, 3246
SatI GCNGC 3 cut(s) 267, 1059, 2221
Sau3AI GATC 9 cut(s) 301, 604, 958, 1188, 1295, 2139, 2237, 2614, 3133
Sau96I GGNCC 8 cut(s) 341, 776, 839, 1148, 1512, 2212, 2381, 2489
ScaI AGTACT 1 cut(s) 3012
SchI GAGTC 2 cut(s) 13, 3589
ScrFI CCNGG 7 cut(s) 674, 731, 1147, 2112, 2923, 3330, 3532
SduI GDGCHC 5 cut(s) 1644, 3026, 3188, 3246, 3560
SexAI ACCWGGT 1 cut(s) 729
SfaNI GCATC 3 cut(s) 2874, 3334, 3471
SfcI CTRYAG 4 cut(s) 264, 423, 927, 3210
Sfr274I CTCGAG 1 cut(s) 2057
SinI GGWCC 5 cut(s) 839, 1512, 2212, 2381, 2489
SlaI CTCGAG 1 cut(s) 2057
SmiMI CAYNNNNRTG 3 cut(s) 1819, 1847, 2892
SmlI CTYRAG 5 cut(s) 1111, 1549, 1678, 2057, 2579
SmoI CTYRAG 5 cut(s) 1111, 1549, 1678, 2057, 2579
SsiI CCGC 2 cut(s) 1365, 3103
SspI AATATT 2 cut(s) 527, 1228
SspMI CTAG 6 cut(s) 1928, 2331, 2817, 3131, 3386, 3604
SstI GAGCTC 2 cut(s) 3188, 3246
StyD4I CCNGG 7 cut(s) 672, 729, 1145, 2110, 2921, 3328, 3530
StyI CCWWGG 5 cut(s) 384, 772, 1053, 3438, 3453
TaaI ACNGT 2 cut(s) 229, 2202
TaiI ACGT 1 cut(s) 2120
TaqI TCGA 8 cut(s) 42, 300, 824, 957, 964, 1646, 2058, 2613
TaqII GACCGA 1 cut(s) 3390
TatI WGTACW 4 cut(s) 990, 1275, 2937, 3010
TscAI CASTG 6 cut(s) 30, 234, 268, 1078, 1528, 2698
TseFI GTSAC 3 cut(s) 1787, 2557, 2819
TseI GCWGC 3 cut(s) 266, 1058, 2220
Tsp45I GTSAC 3 cut(s) 1787, 2557, 2819
TspDTI ATGAA 8 cut(s) 17, 147, 1748, 1769, 2217, 2422, 2727, 2964
TspGWI ACGGA 5 cut(s) 458, 1437, 1477, 1859, 1875
TspRI CASTG 6 cut(s) 30, 234, 268, 1078, 1528, 2698
Van91I CCANNNNNTGG 3 cut(s) 1241, 1385, 3531
Vha464I CTTAAG 1 cut(s) 2579
VneI GTGCAC 1 cut(s) 1640
VpaK11BI GGWCC 5 cut(s) 839, 1512, 2212, 2381, 2489
XapI RAATTY 9 cut(s) 154, 237, 572, 632, 641, 970, 1869, 1972, 2511
XbaI TCTAGA 1 cut(s) 2330
XceI RCATGY 1 cut(s) 101
XcmI CCANNNNNNNNNTGG 3 cut(s) 3445, 3499, 3574
XhoI CTCGAG 1 cut(s) 2057
XmiI GTMKAC 3 cut(s) 1419, 2751, 3282
XmnI GAANNNNTTC 4 cut(s) 1577, 1652, 1687, 1776
XspI CTAG 6 cut(s) 1928, 2331, 2817, 3131, 3386, 3604
ZrmI AGTACT 1 cut(s) 3012
Zsp2I ATGCAT 2 cut(s) 1750, 3498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.