Rmu_sc0005494.1_g000004

Receptor protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005494.1
Physical Location & Seq
Forward (+)
17180 .. 20534
3355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005494.1_g000004.1.cds

Sequence Viewer

Length: 3027 bp
atgagatcttcaactaatgacaaagtttgctctctagcttattgctttatcttcttgtatgttcagcttgtttcaactccagaccttgtttctgcttctactactgaagcagaagctcttctcaaatggaaagccagctttcgatatcaaacccaaaatattctgacctcatggacttaccttcccaatacttatgtcaccaattcctcaatcccatgcaattggactggtatttcatgcgacaaagctggaagagtcaccaggataaagcttagcaattttcttttgcaaggtacgctacatgcattttctttcttggccttcccaaatcttgcatatgttaatctcagcatgaataaactctttgacaccatcccacccgaaattagctacctctccaaactcatctctcttgatctctctcttaatcaattttccgggagaatcccaccagaaattggtttcctgaaaaatcttaaggttctcctcctcttcagaaataacctttctggctctattcctaaggagataggaagcttaaaatcaattgtggatctagagttgtcaaacaatcaactacatggttcaattccctcttcatttggtgatttgagcagcttaaaaaccttgaacctcagttacaacaacctttctggccatattcctaaagagatagggaaactgaaatgtattgtgtgtctaaccttgaggaacaatcaactgaacggttcaattcccacatctcttggtgacttgagaaaattgaaaatcttatacctccgtgagaatcaactttctggcaggattcctaaagagataggaaacttgaaatctcttgtgcatctaggcttgagcgtcaatcagctcaatggttcagttcccacttcatttggtaaattactcaaattgaaaactttaaatctccgccagaaccagctttcgggattcatcccccaacaaatggagaacctcaccaagttgattgagcttcatttggattccaaccatttttctggttatctaccccaaaatgtttgccaaggtggatctctcacaaacttcagcataaacaagaaccatttcataggtccggtgccgaagagcttgaaaaattgtacaagcttaatcagagtccgccttgaagagaatcaattaactggtaacatttctgaagactttggtgtctatccaaatctcaccttcttaaggctaaatgacaacaacttctatggtgaaatttcacataattggggacaatgtccaaatctaaaagacctaggaatggcaggaaacaacctaactggtagcataccacctcagatttgcaatgcaaccaagcttcaggagctcaatctatcttcaaatcgtttagttgggatgattccaaaggaattcgcaaggttgacttctttgctggagttgaggttgaatgacaatcaactttcgggtcgtataccctcagaatttggatcactggttgatcttgattatcttgacctatccgccaacaaattcaatggctccattcctaaaatcctaggtgacttgctctatttacactacttgaatttgagcaataatgagttcattcaagaaattccactcgagttggggaatctagttcatctatccacgctagatgtaagttttaactcacttaaaggcaacataccatcagaaatgggcaatatgcagagcttggaaaatctgaatctttcccacaataatctttctggcctcattccaataacatttgaagacatgcacggcttgtggtgtgttgatatatccaacaatgacttcgagggttcccttcccaacatcacagcatttcaacatgctcccccacaagcattacaagggaacaagagattgtgcggccccattggatcgtttccaccctgcaaaagtatctcaaagaaggatcacagactggtaacttcaatcataatcacgattgtggcgacacttttactgctatctgttacaattgcttgtgtaatagaaagaaaaaagagatataagcatgtagaaaaagagatcaaggatgaagaatattttgcttcagtgatgataaattgtgatggaaaagtgatgtatgaggatatcgtaagggcaacagaagattttaattctgcatattgcattgggaagggagggcatggaactgtatataaagcaactttgtcatctggcgacatagtggcagtgaagaaattccatgtgttctcaaatattggtgagaagtattgccagaaggaattcttcaatgaaataagagctctgactgagatacgacatcgaaacattgtgaaattttatgggtattgttcatgtacacgacactcattcttggtgtatgagtatctagaaaggggtaacttggccacaatgttgagtaaagataatgaaggtaaagaattggggtggagtagaagggtaaatattgttaaaggtgtagctcatgccttgtcttacatgcaccacgattgcttgccaccaattgtgcatcgggacatctcgagcaagaacatattgctggattctgaatatgaggcctctgtttcagactttggcactgcaaagttgttaaaaactgactcagcaaattggactacccttgcaggcacatatggatatgttgcaccagagcttgcgtatacaatggaagtgaacgaaaaatgtgatgtttatagctttggagtggtaacattagaaataattatgggaaggcatccaggtgatcttctcttaactttaacatcaggggcatcgtcatcatctacattcccggctcatcaaatgccaattgtggaagttttggaccagcgtatttcccctcctacacatgaaattgcaggggaagtgctttctcttgcgaagatagcattttcatgtttgaatgtcagtcctctatctcgtccaaaaatgaaacaagtttctcagtatttggaagctcagaggctgcatatgtcaaagccattacatatgataacatgtggtgaattgcttactctcggtgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1008

Amino Acids

112.14

Weight (kDa)

8.35

Isoelectric Point (pI)

32.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1181
AccB1I GGYRCC 2 cut(s) 1093, 3020
AccB7I CCANNNNNTGG 2 cut(s) 458, 961
AccI GTMKAC 2 cut(s) 1453, 2660
AciI CCGC 4 cut(s) 925, 1135, 1503, 1878
AclWI GGATC 5 cut(s) 561, 1054, 1477, 1897, 1932
AcoI YGGCCR 2 cut(s) 655, 2385
AcsI RAATTY 9 cut(s) 1236, 1391, 1463, 1511, 1567, 1596, 2216, 2261, 2315
AcuI CTGAAG 6 cut(s) 126, 478, 1045, 1191, 1325, 2049
AfaI GTAC 3 cut(s) 295, 1117, 2338
AfiI CCNNNNNNNGG 5 cut(s) 458, 940, 961, 1206, 1282
AflII CTTAAG 2 cut(s) 476, 1204
AflIII ACRYGT 1 cut(s) 2996
AjnI CCWGG 2 cut(s) 260, 2737
AjuI GAANNNNNNNTTGG 2 cut(s) 1784, 1816
AleI CACNNNNGTG 1 cut(s) 1958
Alw21I GWGCWC 2 cut(s) 1350, 2284
AlwI GGATC 5 cut(s) 561, 1054, 1477, 1897, 1932
AlwNI CAGNNNCTG 1 cut(s) 2965
Ama87I CYCGRG 2 cut(s) 1604, 2521
AoxI GGCC 6 cut(s) 318, 655, 1735, 1879, 2385, 2556
ApeKI GCWGC 2 cut(s) 615, 2965
ApoI RAATTY 9 cut(s) 1236, 1391, 1463, 1511, 1567, 1596, 2216, 2261, 2315
Asp700I GAANNNNTTC 4 cut(s) 117, 1079, 2216, 2261
AspA2I CCTAGG 2 cut(s) 1276, 1537
AspS9I GGNCC 3 cut(s) 1088, 1880, 2824
AsuC2I CCSGG 2 cut(s) 439, 2792
AvaI CYCGRG 2 cut(s) 1604, 2521
AvaII GGWCC 2 cut(s) 1088, 2824
AvrII CCTAGG 2 cut(s) 1276, 1537
AxyI CCTNAGG 1 cut(s) 522
BalI TGGCCA 2 cut(s) 657, 2387
BanI GGYRCC 2 cut(s) 1093, 3020
BanII GRGCYC 2 cut(s) 1350, 2284
BbsI GAAGAC 2 cut(s) 1179, 1764
Bbv12I GWGCWC 2 cut(s) 1350, 2284
BbvI GCAGC 2 cut(s) 627, 2952
BccI CCATC 3 cut(s) 380, 1681, 2078
BceAI ACGGC 1 cut(s) 1783
BciT130I CCWGG 2 cut(s) 262, 2739
BcnI CCSGG 2 cut(s) 439, 2792
BfaI CTAG 8 cut(s) 35, 557, 845, 1277, 1538, 1619, 1637, 2369
BfrI CTTAAG 2 cut(s) 476, 1204
BglII AGATCT 1 cut(s) 5
BisI GCNGC 3 cut(s) 616, 1879, 2966
BlnI CCTAGG 2 cut(s) 1276, 1537
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 3 cut(s) 617, 1880, 2967
Bme1390I CCNGG 4 cut(s) 262, 439, 2739, 2792
Bme18I GGWCC 2 cut(s) 1088, 2824
BmeT110I CYCGRG 2 cut(s) 1604, 2521
BmgT120I GGNCC 3 cut(s) 1088, 1880, 2824
BmiI GGNNCC 5 cut(s) 1095, 1522, 1810, 1882, 3022
BmrFI CCNGG 4 cut(s) 262, 439, 2739, 2792
BmsI GCATC 4 cut(s) 850, 2518, 2743, 2780
BpiI GAAGAC 2 cut(s) 1179, 1764
BpmI CTGGAG 2 cut(s) 63, 1436
Bpu1102I GCTNAGC 1 cut(s) 272
BpuEI CTTGAG 3 cut(s) 727, 775, 871
BpuMI CCSGG 2 cut(s) 439, 2792
BsaJI CCNNGG 3 cut(s) 1039, 1276, 1537
BsaWI WCCGGW 1 cut(s) 1090
BsaXI ACNNNNNCTCC 2 cut(s) 1409, 1439
Bsc4I CCNNNNNNNGG 5 cut(s) 458, 940, 961, 1206, 1282
Bse1I ACTGG 5 cut(s) 232, 1162, 1306, 1479, 1938
Bse21I CCTNAGG 1 cut(s) 522
Bse3DI GCAATG 1 cut(s) 1333
BseBI CCWGG 2 cut(s) 262, 2739
BseDI CCNNGG 3 cut(s) 1039, 1276, 1537
BseGI GGATG 5 cut(s) 372, 948, 1383, 2053, 2734
BseLI CCNNNNNNNGG 5 cut(s) 458, 940, 961, 1206, 1282
BseMI GCAATG 1 cut(s) 1333
BseMII CTCAG 8 cut(s) 361, 649, 1331, 1473, 2280, 2616, 2957, 2972
BseNI ACTGG 5 cut(s) 232, 1162, 1306, 1479, 1938
BseRI GAGGAG 2 cut(s) 476, 479
BseXI GCAGC 2 cut(s) 627, 2952
BshFI GGCC 6 cut(s) 320, 657, 1737, 1881, 2387, 2558
BshNI GGYRCC 2 cut(s) 1093, 3020
BsiHKAI GWGCWC 2 cut(s) 1350, 2284
BsiHKCI CYCGRG 2 cut(s) 1604, 2521
BsiSI CCGG 3 cut(s) 438, 1091, 2792
BslFI GGGAC 2 cut(s) 1266, 2528
BslI CCNNNNNNNGG 5 cut(s) 458, 940, 961, 1206, 1282
BsmFI GGGAC 2 cut(s) 1266, 2528
BsnI GGCC 6 cut(s) 320, 657, 1737, 1881, 2387, 2558
BsoBI CYCGRG 2 cut(s) 1604, 2521
Bsp1286I GDGCHC 2 cut(s) 1350, 2284
Bsp1407I TGTACA 2 cut(s) 1115, 2336
Bsp1720I GCTNAGC 1 cut(s) 272
BspACI CCGC 4 cut(s) 925, 1135, 1503, 1878
BspANI GGCC 6 cut(s) 320, 657, 1737, 1881, 2387, 2558
BspCNI CTCAG 8 cut(s) 360, 648, 1330, 1472, 2281, 2615, 2956, 2971
BspLI GGNNCC 5 cut(s) 1095, 1522, 1810, 1882, 3022
BspPI GGATC 5 cut(s) 561, 1054, 1477, 1897, 1932
BspQI GCTCTTC 2 cut(s) 123, 1094
BspT107I GGYRCC 2 cut(s) 1093, 3020
BspTI CTTAAG 2 cut(s) 476, 1204
BsrDI GCAATG 1 cut(s) 1333
BsrGI TGTACA 2 cut(s) 1115, 2336
BsrI ACTGG 5 cut(s) 232, 1162, 1306, 1479, 1938
BssECI CCNNGG 3 cut(s) 1039, 1276, 1537
BssNAI GTATAC 2 cut(s) 1454, 2661
BssT1I CCWWGG 3 cut(s) 1039, 1276, 1537
Bst1107I GTATAC 2 cut(s) 1454, 2661
Bst2UI CCWGG 2 cut(s) 262, 2739
Bst4CI ACNGT 2 cut(s) 728, 2170
Bst6I CTCTTC 6 cut(s) 123, 247, 497, 601, 1094, 1137
BstAFI CTTAAG 2 cut(s) 476, 1204
BstAUI TGTACA 2 cut(s) 1115, 2336
BstC8I GCNNGC 4 cut(s) 136, 2495, 2626, 2655
BstENI CCTNNNNNAGG 1 cut(s) 1204
BstF5I GGATG 5 cut(s) 372, 948, 1383, 2053, 2734
BstMWI GCNNNNNNNGC 3 cut(s) 295, 1345, 2885
BstNI CCWGG 2 cut(s) 262, 2739
BstNSI RCATGY 6 cut(s) 305, 1765, 1841, 2030, 2482, 3000
BstSCI CCNGG 4 cut(s) 260, 437, 2737, 2790
BstV1I GCAGC 2 cut(s) 627, 2952
BstV2I GAAGAC 2 cut(s) 1179, 1764
BstX2I RGATCY 3 cut(s) 5, 553, 1046
BstXI CCANNNNNNTGG 2 cut(s) 222, 1013
BstYI RGATCY 3 cut(s) 5, 553, 1046
BstZ17I GTATAC 2 cut(s) 1454, 2661
Bsu36I CCTNAGG 1 cut(s) 522
BsuRI GGCC 6 cut(s) 320, 657, 1737, 1881, 2387, 2558
BtsCI GGATG 5 cut(s) 372, 948, 1383, 2053, 2734
BtsI GCAGTG 2 cut(s) 2214, 2577
BtsIMutI CAGTG 4 cut(s) 1472, 2073, 2214, 2577
Cac8I GCNNGC 4 cut(s) 136, 2495, 2626, 2655
CaiI CAGNNNCTG 1 cut(s) 2965
Cfr13I GGNCC 3 cut(s) 1088, 1880, 2824
CseI GACGC 1 cut(s) 844
Csp6I GTAC 3 cut(s) 294, 1116, 2337
CspCI CAANNNNNGTGG 6 cut(s) 727, 762, 871, 906, 1590, 1625
CviQI GTAC 3 cut(s) 294, 1116, 2337
DraI TTTAAA 1 cut(s) 918
DrdI GACNNNNNNGTC 1 cut(s) 1181
DseDI GACNNNNNNGTC 1 cut(s) 1181
EaeI YGGCCR 2 cut(s) 655, 2385
Eam1104I CTCTTC 6 cut(s) 123, 247, 497, 601, 1094, 1137
EarI CTCTTC 6 cut(s) 123, 247, 497, 601, 1094, 1137
EciI GGCGGA 3 cut(s) 914, 1124, 1492
Ecl136II GAGCTC 2 cut(s) 1348, 2282
Eco130I CCWWGG 3 cut(s) 1039, 1276, 1537
Eco147I AGGCCT 1 cut(s) 2558
Eco24I GRGCYC 2 cut(s) 1350, 2284
Eco32I GATATC 2 cut(s) 146, 2107
Eco47I GGWCC 2 cut(s) 1088, 2824
Eco53kI GAGCTC 2 cut(s) 1348, 2282
Eco57I CTGAAG 6 cut(s) 126, 478, 1045, 1191, 1325, 2049
Eco81I CCTNAGG 1 cut(s) 522
Eco88I CYCGRG 2 cut(s) 1604, 2521
EcoICRI GAGCTC 2 cut(s) 1348, 2282
EcoNI CCTNNNNNAGG 1 cut(s) 1204
EcoRI GAATTC 2 cut(s) 1391, 2261
EcoRII CCWGG 2 cut(s) 260, 2737
EcoRV GATATC 2 cut(s) 146, 2107
EcoT14I CCWWGG 3 cut(s) 1039, 1276, 1537
EcoT22I ATGCAT 1 cut(s) 307
EcoT38I GRGCYC 2 cut(s) 1350, 2284
ErhI CCWWGG 3 cut(s) 1039, 1276, 1537
FalI AAGNNNNNCTT 4 cut(s) 1390, 1422, 2249, 2281
FaqI GGGAC 2 cut(s) 1266, 2528
FauNDI CATATG 4 cut(s) 337, 2632, 2970, 2988
FblI GTMKAC 2 cut(s) 1453, 2660
Fnu4HI GCNGC 3 cut(s) 616, 1879, 2966
FokI GGATG 5 cut(s) 359, 935, 1390, 2060, 2721
FriOI GRGCYC 2 cut(s) 1350, 2284
Fsp4HI GCNGC 3 cut(s) 616, 1879, 2966
FspBI CTAG 8 cut(s) 35, 557, 845, 1277, 1538, 1619, 1637, 2369
GluI GCNGC 3 cut(s) 616, 1879, 2966
GsuI CTGGAG 2 cut(s) 63, 1436
HaeIII GGCC 6 cut(s) 320, 657, 1737, 1881, 2387, 2558
HapII CCGG 3 cut(s) 438, 1091, 2792
HgaI GACGC 1 cut(s) 844
HincII GTYRAC 1 cut(s) 1404
HindII GTYRAC 1 cut(s) 1404
HindIII AAGCTT 4 cut(s) 269, 535, 1120, 1337
HpaII CCGG 3 cut(s) 438, 1091, 2792
Hpy166II GTNNAC 5 cut(s) 1404, 1454, 2339, 2661, 2674
Hpy8I GTNNAC 5 cut(s) 1404, 1454, 2339, 2661, 2674
HpyCH4III ACNGT 2 cut(s) 728, 2170
HpyF10VI GCNNNNNNNGC 3 cut(s) 295, 1345, 2885
LguI GCTCTTC 2 cut(s) 123, 1094
LmnI GCTCC 3 cut(s) 1345, 1526, 1846
Lsp1109I GCAGC 2 cut(s) 627, 2952
LweI GCATC 4 cut(s) 850, 2518, 2743, 2780
MaeI CTAG 8 cut(s) 35, 557, 845, 1277, 1538, 1619, 1637, 2369
MfeI CAATTG 5 cut(s) 220, 546, 1989, 2502, 2808
MflI RGATCY 3 cut(s) 5, 553, 1046
MhlI GDGCHC 2 cut(s) 1350, 2284
MlsI TGGCCA 2 cut(s) 657, 2387
MluNI TGGCCA 2 cut(s) 657, 2387
MlyI GAGTC 3 cut(s) 264, 1140, 2594
MmeI TCCRAC 2 cut(s) 1026, 1815
Mox20I TGGCCA 2 cut(s) 657, 2387
Mph1103I ATGCAT 1 cut(s) 307
MroXI GAANNNNTTC 4 cut(s) 117, 1079, 2216, 2261
MscI TGGCCA 2 cut(s) 657, 2387
MslI CAYNNNNRTG 3 cut(s) 1958, 2739, 2893
Msp20I TGGCCA 2 cut(s) 657, 2387
MspCI CTTAAG 2 cut(s) 476, 1204
MspI CCGG 3 cut(s) 438, 1091, 2792
MspR9I CCNGG 4 cut(s) 262, 439, 2739, 2792
MunI CAATTG 5 cut(s) 220, 546, 1989, 2502, 2808
MvaI CCWGG 2 cut(s) 262, 2739
MwoI GCNNNNNNNGC 3 cut(s) 295, 1345, 2885
NciI CCSGG 2 cut(s) 439, 2792
NdeI CATATG 4 cut(s) 337, 2632, 2970, 2988
NlaIV GGNNCC 5 cut(s) 1095, 1522, 1810, 1882, 3022
NmuCI GTSAC 4 cut(s) 196, 256, 749, 1541
NsiI ATGCAT 1 cut(s) 307
NspI RCATGY 6 cut(s) 305, 1765, 1841, 2030, 2482, 3000
OliI CACNNNNGTG 1 cut(s) 1958
PaeR7I CTCGAG 2 cut(s) 1604, 2521
PceI AGGCCT 1 cut(s) 2558
PciI ACATGT 1 cut(s) 2996
PciSI GCTCTTC 2 cut(s) 123, 1094
PcsI WCGNNNNNNNCGW 1 cut(s) 1961
PdmI GAANNNNTTC 4 cut(s) 117, 1079, 2216, 2261
PflFI GACNNNGTC 1 cut(s) 1257
PflMI CCANNNNNTGG 2 cut(s) 458, 961
PfoI TCCNGGA 1 cut(s) 437
PkrI GCNGC 3 cut(s) 617, 1880, 2967
PleI GAGTC 3 cut(s) 263, 1139, 2594
PpsI GAGTC 3 cut(s) 263, 1139, 2594
PscI ACATGT 1 cut(s) 2996
Psp124BI GAGCTC 2 cut(s) 1350, 2284
Psp6I CCWGG 2 cut(s) 260, 2737
PspGI CCWGG 2 cut(s) 260, 2737
PspN4I GGNNCC 5 cut(s) 1095, 1522, 1810, 1882, 3022
PspPI GGNCC 3 cut(s) 1088, 1880, 2824
PspXI VCTCGAGB 1 cut(s) 1604
PsrI GAACNNNNNNTAC 2 cut(s) 623, 655
PstNI CAGNNNCTG 1 cut(s) 2965
PsuI RGATCY 3 cut(s) 5, 553, 1046
PsyI GACNNNGTC 1 cut(s) 1257
RsaI GTAC 3 cut(s) 295, 1117, 2338
RsaNI GTAC 3 cut(s) 294, 1116, 2337
RseI CAYNNNNRTG 3 cut(s) 1958, 2739, 2893
SacI GAGCTC 2 cut(s) 1350, 2284
SapI GCTCTTC 2 cut(s) 123, 1094
SatI GCNGC 3 cut(s) 616, 1879, 2966
Sau96I GGNCC 3 cut(s) 1088, 1880, 2824
SchI GAGTC 3 cut(s) 264, 1140, 2594
ScrFI CCNGG 4 cut(s) 262, 439, 2739, 2792
SduI GDGCHC 2 cut(s) 1350, 2284
SfaNI GCATC 4 cut(s) 850, 2518, 2743, 2780
Sfr274I CTCGAG 2 cut(s) 1604, 2521
SinI GGWCC 2 cut(s) 1088, 2824
SlaI CTCGAG 2 cut(s) 1604, 2521
SmiMI CAYNNNNRTG 3 cut(s) 1958, 2739, 2893
SmlI CTYRAG 7 cut(s) 476, 706, 754, 850, 1204, 1604, 2521
SmoI CTYRAG 7 cut(s) 476, 706, 754, 850, 1204, 1604, 2521
SseBI AGGCCT 1 cut(s) 2558
SsiI CCGC 4 cut(s) 925, 1135, 1503, 1878
SspI AATATT 4 cut(s) 160, 2057, 2236, 2446
SspMI CTAG 8 cut(s) 35, 557, 845, 1277, 1538, 1619, 1637, 2369
SstI GAGCTC 2 cut(s) 1350, 2284
StuI AGGCCT 1 cut(s) 2558
StyD4I CCNGG 4 cut(s) 260, 437, 2737, 2790
StyI CCWWGG 3 cut(s) 1039, 1276, 1537
TaaI ACNGT 2 cut(s) 728, 2170
TaqI TCGA 5 cut(s) 142, 1605, 1803, 2302, 2522
TatI WGTACW 2 cut(s) 1115, 2336
TauI GCSGC 1 cut(s) 1881
TscAI CASTG 4 cut(s) 1479, 2073, 2214, 2584
TseFI GTSAC 4 cut(s) 196, 256, 749, 1541
TseI GCWGC 2 cut(s) 615, 2965
Tsp45I GTSAC 4 cut(s) 196, 256, 749, 1541
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 4 cut(s) 1479, 2073, 2214, 2584
Tth111I GACNNNGTC 1 cut(s) 1257
Van91I CCANNNNNTGG 2 cut(s) 458, 961
Vha464I CTTAAG 2 cut(s) 476, 1204
VpaK11BI GGWCC 2 cut(s) 1088, 2824
XagI CCTNNNNNAGG 1 cut(s) 1204
XapI RAATTY 9 cut(s) 1236, 1391, 1463, 1511, 1567, 1596, 2216, 2261, 2315
XbaI TCTAGA 2 cut(s) 556, 2368
XceI RCATGY 6 cut(s) 305, 1765, 1841, 2030, 2482, 3000
XhoI CTCGAG 2 cut(s) 1604, 2521
XmaJI CCTAGG 2 cut(s) 1276, 1537
XmiI GTMKAC 2 cut(s) 1453, 2660
XmnI GAANNNNTTC 4 cut(s) 117, 1079, 2216, 2261
XspI CTAG 8 cut(s) 35, 557, 845, 1277, 1538, 1619, 1637, 2369
Zsp2I ATGCAT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.