RLG00000029178

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
34102607 .. 34106338
3732 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029178

Sequence Viewer

Length: 2952 bp
ATGGAGATAGGAAACCTGAAATCTTTGGTGGATCTAGAGTTGAGCAACAATCGACTAAGTGGTTCAATTCCAAGAATAGTAGGCAATTTGACCAACCTTACCACTCTCCATCTTTTTAGAAATAATATTTCTGGCACTATTCCTATGGAGATAGGAAACCTGAAATATTTGGTGGATCTACAGTTGAGCACCAATCAACTCAGTGGTTCAATTCCAACAACATTAGGTAATTTGGCCAACCTTACCACTCTCTATCTCCATTCAAATAATCTTTCTGGCACTATTCCTATGGAGATGGGAAACCTAAAATCATTGGTGGATCTACAGTTGAGCACCAATCAACTCAGTGGTTCAATTCCGACAACACTGGGGGATCTGACCAACCTTACCACTCTCTATCTCTATAGAAATAATCTTTCTAGCACTATTCCTATGGAGATAGGAAACTTGAAATCATTGGTGATTTTAGGGTTGGGCAACAATCAACTCAATGGTTCAATTCCGACAACATTAGGTAATTTGGCCAACCTTACTATTCTCTATCTCTATTCAAATAATATTTCTGGTACTATTCCTATGGAGATGGGAAACCTGAAATCATTGGTGGATCTAGAGTTGAGCTTCAATCAACTTAGTGGTTCAATTCCGACAACATTAGGTAATTTGAACAACCTTACTATTCTCTATCTCAATTCAAATAATCTTTCTGGCACTATTCCTATGGAGATGGGAAACCTGAAATCATTAGTGTCTCTAGGGTTGGAATCCAATGAACTCAGTGGTTCAATTCCAGCGTCATTATGTGACTTGCCCAACTTGGAGAACTTAAGCCTCAAAGACAACCAACTCTCTGGCTCCATTCAAGAGATAGGAAATATCCCGAAGCTGACAATTATGCAATTAGATACAAACCAATTTTCGGGTAATTTGCCACATAACATTTGCCGATCTGGATCACTCACATACTTTTCAGCATTCTCCAATCATCTGAGTGGTCCAATCCCCAAATTCTTGAAAACCTGCACTACCTTACTCAGAGTCCGTCTAGACAGGAACCAATTGACAGGTAATATATCTGAAGACTTTGGGGTTTATCCAAGTCTCAATTTCATAGATTTGAGCAACAATCAACTTTATGGTGAAATCTCACCAAATTGGGGATTGTGCCCAAATTTAACAACCCTACGAATAGCGGGAAACAAACTTACTGGTTCTATACCAACTGAGATTGGAAACGCAACCCAAATTCATGAGCTGGATCTTTCTTCAAATGGTTTAATCGGGACAATTCCGAAGGAGCTTGGGAGATTAGCATCAATGCTGAAGCTAATGTTGGATGGTAATCAACTTTCAGGTCATGTCCCTTCAGAGTTGAAATCATTGACTGATCTAGAATATCTTGATCTGTCAGCAAACGAATTCAATGATTCAATTCCAAGTTTTGTAGGTGACTTTCAAAAGTTACATTACTTGAATTTGAGCAACAACAGGTTCAATCAAGTAATTCCATTTCAATTGGCGAAGTTAATTCATCTATCCCAACTAGATTTGAGTTTTAACACAATTGATGGTCAGATACCATCAGATATTAGTAATATGGAGAGTCTGGAGATACTTAATATATCCCATAACAATCTTTCTGGTTTCATTCCAACAAGTTTTGAAGACATGCACGGGTTGTCATATGTAGACATATCCTACAATGACTTGGAAGGTCCACTTCCCAACAACAAAGCATTTCAAGCTGCTACTCAAGAAGCATTGCAAGGGAACAAGGGCTTGTGTGGCAACGCACGATTTTTGCAACCCTGTAATAAACAAAGCCCAAAAAAGGACCATAAACTCGCATTTATGATAATCTTCCCTATTCTTGGAGTAGTTGCACTTCTAGCCTTTATATTTGTACTGGTAGCAAAAAGGAAAAATACGCATCGGCATGGAGAAAAAACCAACATGAATGAAGGAATTTCTTTTTCAATATTAAAGTTTGATGGAAAGACGATGTTTGAGGAAATCGTGAGGGCAACAGAAAATTTTGATCCCATGTATTGCATAGGGCAGGGAGAACAAGGAAGTGTCTACAAAGCAACTTTGTCATCCAGTTACACAGTGGCTGTGAAGAAACTCCATTTTCCATGCGACGATGACAAGAATCTTCAGAAGACATTCTTGAATGAAATTAGGGCACTAACTGAGATGCGTCATCGAAATATTGTGAAGTTTTATGGATTCTGTTCACATAGGCAGCACTCATTTTTGGTGTATGATTATCTGGAAAAGGGTAGTTTGGCCACATTGTTGAGCAAAGATGAGGAAGCTAAAGAACTGGGGTGGAGTAAAAGGGTGAATATAGTTAAAGGTGTAGCTCATGCCTTGTGTTACATACATCATGATTGTTTGCCACCGATTGTGCATCGGGACATATCGAGCAAGAACATTTTGCTAGATGATGAATATGTAGCCTGTGTTTCAGACTTCGGCACTGCTAAGTTCTTAAACCCAGACTCGGCTAATTGGAGTGCCCTTGCAGGCACATATGGATATGTTGCACCAGAGCTTGCTTATACCATGGAAGTGAATGAGAAGTGTGATGTTTATAGCTTTGGAGTGGTGACATTGGAGACAGTTATGGGAAGACATCCGGGAGATCTTCTCTCATCTCTATCTTCGGGGGCGTGTTCATCATCATCATCATCAACTGCATTACCAGCCCATCAGATGCCAGTTGTGGATGTTTTGGACCAACGCATTTCCCCTCCTACACATGAAGTTGCAGGAGAAGTTGTCTCTGTTGTGAAGGTAGCATTTGCATGCCTGAATTCCAATCCTCAATTTCGTCCAACAATGAAGCAAGTTTCTCAACACCTCTCGACTAAAAGACTGCATTTGTCAGATCCAATAGCTATGATAACATGCGGTGAATATCTTGCTTGTAATGGTTTGACCGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

984

Amino Acids

107.64

Weight (kDa)

5.81

Isoelectric Point (pI)

29.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 27 - 136 4.4e-12 Leucine-rich repeat region
LRR_14 PF23598 140 - 232 6e-11 Leucine-rich repeat region
LRR_8 PF13855 152 - 211 5.2e-06 Leucine rich repeat
LRR_14 PF23598 213 - 309 4.5e-06 Leucine-rich repeat region
LRR_8 PF13855 511 - 570 5e-09 Leucine rich repeat
Pkinase PF00069 684 - 955 4.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 685 - 956 8.1e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1028
AccI GTMKAC 2 cut(s) 1689, 2079
AciI CCGC 3 cut(s) 1193, 2916, 2946
AclWI GGATC 9 cut(s) 39, 183, 327, 381, 615, 961, 1266, 2033, 2888
AcoI YGGCCR 3 cut(s) 234, 522, 2289
AcsI RAATTY 8 cut(s) 1007, 1171, 1245, 1418, 1474, 1965, 2032, 2818
AcuI CTGAAG 4 cut(s) 1098, 1343, 1350, 2141
AfaI GTAC 2 cut(s) 568, 1905
AfiI CCNNNNNNNGG 5 cut(s) 919, 1157, 1831, 1871, 2506
AflII CTTAAG 1 cut(s) 826
AjuI GAANNNNNNNTTGG 2 cut(s) 1316, 1348
Alw21I GWGCWC 2 cut(s) 191, 335
Alw26I GTCTC 4 cut(s) 756, 1106, 2615, 2791
AlwI GGATC 9 cut(s) 39, 183, 327, 381, 615, 961, 1266, 2033, 2888
AlwNI CAGNNNCTG 1 cut(s) 2114
AoxI GGCC 3 cut(s) 234, 522, 2289
ApeKI GCWGC 2 cut(s) 1745, 2245
ApoI RAATTY 8 cut(s) 1007, 1171, 1245, 1418, 1474, 1965, 2032, 2818
Asp700I GAANNNNTTC 1 cut(s) 2165
AspS9I GGNCC 4 cut(s) 995, 1715, 1834, 2740
AsuC2I CCSGG 1 cut(s) 2643
AsuHPI GGTGA 7 cut(s) 472, 1140, 1151, 1460, 2356, 2623, 2930
AvaII GGWCC 4 cut(s) 995, 1715, 1834, 2740
BaeGI GKGCMC 3 cut(s) 1169, 2188, 2524
BalI TGGCCA 3 cut(s) 236, 524, 2291
BarI GAAGNNNNNNTAC 2 cut(s) 1869, 1901
BbsI GAAGAC 4 cut(s) 1086, 1671, 2168, 2641
Bbv12I GWGCWC 2 cut(s) 191, 335
BbvI GCAGC 2 cut(s) 1732, 2257
BccI CCATC 9 cut(s) 117, 289, 577, 721, 1331, 1562, 1588, 1985, 2721
BcnI CCSGG 1 cut(s) 2643
BcoDI GTCTC 4 cut(s) 756, 1106, 2615, 2791
BfaI CTAG 9 cut(s) 35, 420, 611, 755, 1046, 1391, 1544, 1889, 2444
BfmI CTRYAG 3 cut(s) 179, 323, 403
BfrI CTTAAG 1 cut(s) 826
BfuAI ACCTGC 1 cut(s) 1028
BglII AGATCT 1 cut(s) 2647
BisI GCNGC 2 cut(s) 1746, 2246
BlsI GCNGC 2 cut(s) 1747, 2247
Bme1390I CCNGG 1 cut(s) 2643
Bme18I GGWCC 4 cut(s) 995, 1715, 1834, 2740
BmgT120I GGNCC 4 cut(s) 995, 1715, 1834, 2740
BmiI GGNNCC 2 cut(s) 856, 1055
BmrFI CCNGG 1 cut(s) 2643
BmrI ACTGGG 2 cut(s) 377, 2336
BmsI GCATC 5 cut(s) 1322, 1939, 2187, 2422, 2709
BmuI ACTGGG 2 cut(s) 377, 2336
BpiI GAAGAC 4 cut(s) 1086, 1671, 2168, 2641
BplI GAGNNNNNCTC 2 cut(s) 2637, 2669
BpmI CTGGAG 1 cut(s) 1628
BpuEI CTTGAG 1 cut(s) 1737
BpuMI CCSGG 1 cut(s) 2643
BsaBI GATNNNNATC 3 cut(s) 952, 1312, 1341
BsaJI CCNNGG 1 cut(s) 2568
BsaXI ACNNNNNCTCC 2 cut(s) 2769, 2799
Bsc4I CCNNNNNNNGG 5 cut(s) 919, 1157, 1831, 1871, 2506
Bse1I ACTGG 6 cut(s) 372, 1213, 1911, 2100, 2331, 2723
Bse3DI GCAATG 1 cut(s) 1760
Bse8I GATNNNNATC 3 cut(s) 952, 1312, 1341
BseDI CCNNGG 1 cut(s) 2568
BseGI GGATG 4 cut(s) 1342, 2096, 2638, 2737
BseJI GATNNNNATC 3 cut(s) 952, 1312, 1341
BseLI CCNNNNNNNGG 5 cut(s) 919, 1157, 1831, 1871, 2506
BseMI GCAATG 1 cut(s) 1760
BseMII CTCAG 7 cut(s) 214, 358, 790, 980, 1048, 1215, 2184
BseNI ACTGG 6 cut(s) 372, 1213, 1911, 2100, 2331, 2723
BseSI GKGCMC 3 cut(s) 1169, 2188, 2524
BseXI GCAGC 2 cut(s) 1732, 2257
BsgI GTGCAG 1 cut(s) 1006
BshFI GGCC 3 cut(s) 236, 524, 2291
BsiHKAI GWGCWC 2 cut(s) 191, 335
BsiSI CCGG 1 cut(s) 2642
BslFI GGGAC 3 cut(s) 1297, 1346, 2432
BslI CCNNNNNNNGG 5 cut(s) 919, 1157, 1831, 1871, 2506
BsmAI GTCTC 4 cut(s) 756, 1106, 2615, 2791
BsmFI GGGAC 3 cut(s) 1297, 1346, 2432
BsmI GAATGC 1 cut(s) 974
BsnI GGCC 3 cut(s) 236, 524, 2291
Bsp1286I GDGCHC 5 cut(s) 191, 335, 1169, 2188, 2524
Bsp19I CCATGG 1 cut(s) 2568
BspACI CCGC 3 cut(s) 1193, 2916, 2946
BspANI GGCC 3 cut(s) 236, 524, 2291
BspCNI CTCAG 7 cut(s) 213, 357, 789, 981, 1047, 1216, 2185
BspHI TCATGA 2 cut(s) 1249, 2389
BspLI GGNNCC 2 cut(s) 856, 1055
BspMI ACCTGC 1 cut(s) 1028
BspPI GGATC 9 cut(s) 39, 183, 327, 381, 615, 961, 1266, 2033, 2888
BspTI CTTAAG 1 cut(s) 826
BsrDI GCAATG 1 cut(s) 1760
BsrI ACTGG 6 cut(s) 372, 1213, 1911, 2100, 2331, 2723
BssECI CCNNGG 1 cut(s) 2568
BssT1I CCWWGG 1 cut(s) 2568
Bst4CI ACNGT 4 cut(s) 183, 327, 2110, 2626
BstAFI CTTAAG 1 cut(s) 826
BstC8I GCNNGC 3 cut(s) 2530, 2559, 2812
BstDSI CCRYGG 1 cut(s) 2568
BstF5I GGATG 4 cut(s) 1342, 2096, 2638, 2737
BstMAI GTCTC 4 cut(s) 756, 1106, 2615, 2791
BstMWI GCNNNNNNNGC 4 cut(s) 1742, 1785, 1889, 2708
BstNSI RCATGY 3 cut(s) 1672, 2814, 2916
BstSCI CCNGG 1 cut(s) 2641
BstSFI CTRYAG 3 cut(s) 179, 323, 403
BstSLI GKGCMC 3 cut(s) 1169, 2188, 2524
BstV1I GCAGC 2 cut(s) 1732, 2257
BstV2I GAAGAC 4 cut(s) 1086, 1671, 2168, 2641
BstX2I RGATCY 8 cut(s) 31, 175, 319, 373, 607, 1258, 2647, 2893
BstXI CCANNNNNNTGG 1 cut(s) 851
BstYI RGATCY 8 cut(s) 31, 175, 319, 373, 607, 1258, 2647, 2893
BsuRI GGCC 3 cut(s) 236, 524, 2291
BtgI CCRYGG 1 cut(s) 2568
BtsCI GGATG 4 cut(s) 1342, 2096, 2638, 2737
BtsI GCAGTG 1 cut(s) 2481
BtsIMutI CAGTG 6 cut(s) 208, 352, 365, 784, 2115, 2481
BveI ACCTGC 1 cut(s) 1028
Cac8I GCNNGC 3 cut(s) 2530, 2559, 2812
CaiI CAGNNNCTG 1 cut(s) 2114
CciI TCATGA 2 cut(s) 1249, 2389
Cfr13I GGNCC 4 cut(s) 995, 1715, 1834, 2740
CseI GACGC 2 cut(s) 783, 2189
Csp6I GTAC 2 cut(s) 567, 1904
CviQI GTAC 2 cut(s) 567, 1904
EaeI YGGCCR 3 cut(s) 234, 522, 2289
Eco130I CCWWGG 1 cut(s) 2568
Eco47I GGWCC 4 cut(s) 995, 1715, 1834, 2740
Eco57I CTGAAG 4 cut(s) 1098, 1343, 1350, 2141
EcoRI GAATTC 2 cut(s) 1418, 2818
EcoT14I CCWWGG 1 cut(s) 2568
ErhI CCWWGG 1 cut(s) 2568
FalI AAGNNNNNCTT 4 cut(s) 1704, 1736, 2153, 2185
FaqI GGGAC 3 cut(s) 1297, 1346, 2432
FauI CCCGC 1 cut(s) 1186
FauNDI CATATG 2 cut(s) 1684, 2536
FblI GTMKAC 2 cut(s) 1689, 2079
Fnu4HI GCNGC 2 cut(s) 1746, 2246
FokI GGATG 4 cut(s) 1349, 2083, 2625, 2744
Fsp4HI GCNGC 2 cut(s) 1746, 2246
FspBI CTAG 9 cut(s) 35, 420, 611, 755, 1046, 1391, 1544, 1889, 2444
GluI GCNGC 2 cut(s) 1746, 2246
GsuI CTGGAG 1 cut(s) 1628
HaeIII GGCC 3 cut(s) 236, 524, 2291
HapII CCGG 1 cut(s) 2642
HgaI GACGC 2 cut(s) 783, 2189
HinfI GANTC 7 cut(s) 764, 1038, 1427, 1603, 2152, 2229, 2504
HpaII CCGG 1 cut(s) 2642
HphI GGTGA 7 cut(s) 472, 1140, 1151, 1460, 2356, 2623, 2930
Hpy166II GTNNAC 4 cut(s) 1690, 1718, 2080, 2237
Hpy8I GTNNAC 4 cut(s) 1690, 1718, 2080, 2237
Hpy99I CGWCG 1 cut(s) 2144
HpyAV CCTTC 5 cut(s) 1288, 1374, 1706, 1955, 2791
HpyCH4III ACNGT 4 cut(s) 183, 327, 2110, 2626
HpyF10VI GCNNNNNNNGC 4 cut(s) 1742, 1785, 1889, 2708
LmnI GCTCC 2 cut(s) 860, 1297
Lsp1109I GCAGC 2 cut(s) 1732, 2257
LweI GCATC 5 cut(s) 1322, 1939, 2187, 2422, 2709
MaeI CTAG 9 cut(s) 35, 420, 611, 755, 1046, 1391, 1544, 1889, 2444
MaeIII GTNAC 6 cut(s) 803, 1448, 1461, 2102, 2378, 2611
MfeI CAATTG 3 cut(s) 1058, 1514, 1563
MflI RGATCY 8 cut(s) 31, 175, 319, 373, 607, 1258, 2647, 2893
MhlI GDGCHC 5 cut(s) 191, 335, 1169, 2188, 2524
MlsI TGGCCA 3 cut(s) 236, 524, 2291
MluNI TGGCCA 3 cut(s) 236, 524, 2291
MlyI GAGTC 3 cut(s) 1047, 1612, 2498
MmeI TCCRAC 8 cut(s) 239, 383, 527, 671, 741, 1314, 1676, 2864
MnlI CCTC 7 cut(s) 842, 2002, 2013, 2305, 2766, 2838, 2876
Mox20I TGGCCA 3 cut(s) 236, 524, 2291
MroXI GAANNNNTTC 1 cut(s) 2165
MscI TGGCCA 3 cut(s) 236, 524, 2291
MseI TTAA 9 cut(s) 827, 1175, 1277, 1526, 1557, 1617, 1982, 2355, 2495
MslI CAYNNNNRTG 4 cut(s) 990, 1935, 2573, 2809
Msp20I TGGCCA 3 cut(s) 236, 524, 2291
MspCI CTTAAG 1 cut(s) 826
MspI CCGG 1 cut(s) 2642
MspR9I CCNGG 1 cut(s) 2643
MunI CAATTG 3 cut(s) 1058, 1514, 1563
Mva1269I GAATGC 1 cut(s) 974
MwoI GCNNNNNNNGC 4 cut(s) 1742, 1785, 1889, 2708
NciI CCSGG 1 cut(s) 2643
NcoI CCATGG 1 cut(s) 2568
NdeI CATATG 2 cut(s) 1684, 2536
NlaIV GGNNCC 2 cut(s) 856, 1055
NmeAIII GCCGAG 1 cut(s) 2486
NmuCI GTSAC 3 cut(s) 803, 1448, 2611
NspI RCATGY 3 cut(s) 1672, 2814, 2916
PaeI GCATGC 1 cut(s) 2814
PagI TCATGA 2 cut(s) 1249, 2389
PctI GAATGC 1 cut(s) 974
PdmI GAANNNNTTC 1 cut(s) 2165
PfeI GAWTC 4 cut(s) 764, 1427, 2152, 2229
PfoI TCCNGGA 1 cut(s) 2641
PkrI GCNGC 2 cut(s) 1747, 2247
PleI GAGTC 3 cut(s) 1046, 1611, 2498
PpsI GAGTC 3 cut(s) 1046, 1611, 2498
PspN4I GGNNCC 2 cut(s) 856, 1055
PspPI GGNCC 4 cut(s) 995, 1715, 1834, 2740
PstNI CAGNNNCTG 1 cut(s) 2114
PsuI RGATCY 8 cut(s) 31, 175, 319, 373, 607, 1258, 2647, 2893
RsaI GTAC 2 cut(s) 568, 1905
RsaNI GTAC 2 cut(s) 567, 1904
RseI CAYNNNNRTG 4 cut(s) 990, 1935, 2573, 2809
SaqAI TTAA 9 cut(s) 827, 1175, 1277, 1526, 1557, 1617, 1982, 2355, 2495
SatI GCNGC 2 cut(s) 1746, 2246
Sau96I GGNCC 4 cut(s) 995, 1715, 1834, 2740
SchI GAGTC 3 cut(s) 1047, 1612, 2498
ScrFI CCNGG 1 cut(s) 2643
SduI GDGCHC 5 cut(s) 191, 335, 1169, 2188, 2524
SfaNI GCATC 5 cut(s) 1322, 1939, 2187, 2422, 2709
SfcI CTRYAG 3 cut(s) 179, 323, 403
SinI GGWCC 4 cut(s) 995, 1715, 1834, 2740
SmiMI CAYNNNNRTG 4 cut(s) 990, 1935, 2573, 2809
SmlI CTYRAG 2 cut(s) 826, 1752
SmoI CTYRAG 2 cut(s) 826, 1752
SphI GCATGC 1 cut(s) 2814
SsiI CCGC 3 cut(s) 1193, 2916, 2946
SspI AATATT 5 cut(s) 127, 167, 559, 1980, 2212
SspMI CTAG 9 cut(s) 35, 420, 611, 755, 1046, 1391, 1544, 1889, 2444
StyD4I CCNGG 1 cut(s) 2641
StyI CCWWGG 1 cut(s) 2568
TaaI ACNGT 4 cut(s) 183, 327, 2110, 2626
TaqI TCGA 4 cut(s) 52, 2206, 2426, 2870
TatI WGTACW 1 cut(s) 1903
TfiI GAWTC 4 cut(s) 764, 1427, 2152, 2229
Tru1I TTAA 9 cut(s) 827, 1175, 1277, 1526, 1557, 1617, 1982, 2355, 2495
Tru9I TTAA 9 cut(s) 827, 1175, 1277, 1526, 1557, 1617, 1982, 2355, 2495
TscAI CASTG 6 cut(s) 208, 352, 372, 784, 2115, 2488
TseFI GTSAC 3 cut(s) 803, 1448, 2611
TseI GCWGC 2 cut(s) 1745, 2245
Tsp45I GTSAC 3 cut(s) 803, 1448, 2611
TspGWI ACGGA 1 cut(s) 1031
TspRI CASTG 6 cut(s) 208, 352, 372, 784, 2115, 2488
Vha464I CTTAAG 1 cut(s) 826
VpaK11BI GGWCC 4 cut(s) 995, 1715, 1834, 2740
XapI RAATTY 8 cut(s) 1007, 1171, 1245, 1418, 1474, 1965, 2032, 2818
XbaI TCTAGA 4 cut(s) 34, 610, 1045, 1390
XceI RCATGY 3 cut(s) 1672, 2814, 2916
XcmI CCANNNNNNNNNTGG 1 cut(s) 2107
XmiI GTMKAC 2 cut(s) 1689, 2079
XmnI GAANNNNTTC 1 cut(s) 2165
XspI CTAG 9 cut(s) 35, 420, 611, 755, 1046, 1391, 1544, 1889, 2444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.