Rh7DG424000

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
59864074 .. 59867185
3112 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG424000.1

Sequence Viewer

Length: 2205 bp
ATGGATATGAGCCAGAATCAACTTAGTGGTTCAATTCCAGCTTCATTTGGTGACTTGAGTAACTTGGAAATCTTATTCCTTCGTGATAACAGACTTTCCGGCTCCATCCCCAAAGAGATAGAGAACCTCAAGACGTTGCTTAAACTGCATTTGGATACTAACCAACTTTCTGGTTCTTTGCCCCAAAATATTTGCTATGGTGGATCACTCACAAACTTTTCAGTAAACAGCAACAATTTGGTTGGTCCAATCCCCAGAAGCTTGAAAACCTGCACAAGTTTATTCAGAGTGAGTCTTCAGGGGAACAAATTGACAGGCAACATTTCTGAAGACTTTGGTGTGTATCCAAAACTTCAATATATTGATCTCAGCCACAATGACTTGTATGGTGAAATCACAAGCAAATGGGGACAGTGCCCGCAACTGACAACCCTGAAAATTGCGGGAAACAAGGTAACTGGTAGTATACCACCTGAAATTGGCAAAGCAGCCGAAATTCATGAACTCGATCTTTCTTCAAACAGTTTAGTTGGGATGATTCCAAAGGAACTTGGGAGATTGACTTCTTTGCTTGAGCTGAGGTTGGATGGAAATCAGCTTTTCGGTGGTATCCCTTCAGAATTTGGATCATTGACTAATCTTGAATATCTTGATCTGTCCACAAACAAATTCAATGGGTCAATTCCAAGCATTTTAGGGGCCTTTCTCCAATTAACCCACTTGAATTTGAGCAACAACAAGTTCGGACAAGGAATTCCATTTCAGTTGGGGAAGTTAGATCACCTGTCCGAACTAGATTTAAGTCACAACTTGCTTGAAGGTAAGATACCATCAGAGTTGAGCAGTATGGGGAGTTTAGAGAAGCTAAACCTTTCCCACAACAATCTTTCTGGTTCCATTCCCACAAGTTTTGAAAGGATGAGTTGGTTAACTTCCATTGACCTATCCAACAATGACTTGGAAGGGCCCCTTCCCAACTGCACTGCATTTCAAAAGGCTAGCCCAGAAGCACTTCAAGGGAACAAAGGATTGTGTGGCAATGTTGGAGCTCTGCCGCCTTGCAAACAGAACTCCAAAAAGGACCACAAGCTCATATTTTTCATTCTGTTCCCTCTGCTGGGAGCACTTGCACTTCTGGCTGCCTTCTTTCTATGTGTCTTTGCGAGAGAAAGACAAAAGAAAGAGGAGACTGTAAGCCAAGACACCAAGCCCCGTCATGAAGGAATTTTTATTTCGTCAATACTAAATTTTGATGGAAAAGTGATGTATGAGGAAATCATAAAAGCCACAGAAGATTTTGATTCCAAATATTGCATTGGGAAGGGAGGACATGGGAGCGTCTATGTAGCAAAATTGCCATCTGCCAACAGAGTTGCTGTAAAGAAACTCCACCAGCTATGCAACGATGAGCAGAATCTTCCAAAGGAATTCTTGAATGAAGTAAGGGCACTAACACAGATACGACACCGAAACATTGTGAAGCTTCATGGTTTCTGTTCACATACACGACACTCATTTCTGGTGTATGAGTACCTAGAAAAGGGTAGCATGGAATCATTGTTAAGCAATGATCATGAAGCTAAAGAATTAGGTTGGAGTAGAAGGGTGGTTATTGTGAAGGGTGTAGCTCATGCCTTGAGTTACATGCACCACGACTGCGTGCCACCAATTGTGCATCGAGACATATCAAGCAAGAACATTTTGCTGGATTCTGAATATGAGGCCTGTGTCTCAGACTTTGGCACTGCAAAGTTTTTAAACCCAGACTCAGCCAATTGGACTGCCCTTGCAGGCACATATGGGTATGTAGCACCAGAGCTGGCTTATACAATGGAAGTGAATGAGAAATGTGATGTGTACAGCTTTGGAGTACTAGCATTGGAAATTATTATGGGAAGGCATCCAGGAGATCTTATCTCATCTTTATCATCCGGGCCATCATCCTCCTCTACACCACTACCTGCCCATCAAATGCCAATTGTGGATGTTCTGGACCAACGCATTTCCTCTCCTACTGATGAAGTACCAAAGGAAGTGGTCTCTATTGTGAAGATTGCGTGTGCATGTCTGAATGCACATCCACAATCTCGCCCGACAATGAAACAAGTATCTCAAAACCTCTCAACTCAAAGGCTGGAATTATCAAAGCCATTGCATAGCATAACATGGGGTGATTTGCTTACCCTCGATGCTTTGGCTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

734

Amino Acids

80.58

Weight (kDa)

6.19

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 137 - 221 9.1e-06 Leucine-rich repeat region
LRR_8 PF13855 140 - 200 1.8e-06 Leucine rich repeat
LRR_8 PF13855 257 - 296 4.3e-06 Leucine rich repeat
LRR_8 PF13855 261 - 320 1.8e-08 Leucine rich repeat
Pkinase PF00069 437 - 705 5.6e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 438 - 707 2.2e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 278, 1969
AccI GTMKAC 1 cut(s) 466
AciI CCGC 3 cut(s) 419, 443, 1055
AclWI GGATC 2 cut(s) 211, 634
AcsI RAATTY 8 cut(s) 495, 620, 668, 724, 753, 1224, 1246, 1427
AcuI CTGAAG 3 cut(s) 281, 348, 600
AfaI GTAC 4 cut(s) 1532, 1859, 1872, 2025
AfiI CCNNNNNNNGG 4 cut(s) 479, 1117, 1118, 1540
AjnI CCWGG 1 cut(s) 1903
Alw21I GWGCWC 2 cut(s) 1051, 1126
Alw26I GTCTC 4 cut(s) 1181, 1674, 1735, 2044
AlwI GGATC 2 cut(s) 211, 634
AoxI GGCC 4 cut(s) 699, 965, 1722, 1934
ApaI GGGCCC 1 cut(s) 969
ApeKI GCWGC 2 cut(s) 488, 1139
ApoI RAATTY 8 cut(s) 495, 620, 668, 724, 753, 1224, 1246, 1427
Asp700I GAANNNNTTC 1 cut(s) 1011
AspS9I GGNCC 7 cut(s) 245, 699, 965, 966, 1081, 1934, 1993
AsuC2I CCSGG 1 cut(s) 1933
AsuHPI GGTGA 4 cut(s) 62, 401, 773, 2183
AsuNHI GCTAGC 1 cut(s) 998
AvaII GGWCC 3 cut(s) 245, 1081, 1993
BaeGI GKGCMC 3 cut(s) 419, 969, 1450
BanII GRGCYC 2 cut(s) 969, 1051
BarI GAAGNNNNNNTAC 2 cut(s) 810, 842
BbsI GAAGAC 2 cut(s) 287, 336
Bbv12I GWGCWC 2 cut(s) 1051, 1126
BbvCI CCTCAGC 1 cut(s) 578
BbvI GCAGC 2 cut(s) 500, 1126
BccI CCATC 7 cut(s) 113, 581, 838, 1247, 1366, 1945, 1974
BciT130I CCWGG 1 cut(s) 1905
BciVI GTATCC 3 cut(s) 148, 354, 620
BclI TGATCA 1 cut(s) 1570
BcnI CCSGG 1 cut(s) 1933
BcoDI GTCTC 4 cut(s) 1181, 1674, 1735, 2044
BfaI CTAG 4 cut(s) 794, 999, 1535, 1874
BfuAI ACCTGC 2 cut(s) 278, 1969
BfuI GTATCC 3 cut(s) 148, 354, 620
BglII AGATCT 1 cut(s) 1909
BisI GCNGC 3 cut(s) 489, 1055, 1140
BlsI GCNGC 3 cut(s) 490, 1056, 1141
BmcAI AGTACT 1 cut(s) 1872
Bme1390I CCNGG 2 cut(s) 1905, 1933
Bme18I GGWCC 3 cut(s) 245, 1081, 1993
BmgT120I GGNCC 7 cut(s) 245, 699, 965, 966, 1081, 1934, 1993
BmiI GGNNCC 5 cut(s) 103, 700, 895, 967, 968
BmrFI CCNGG 2 cut(s) 1905, 1933
BmsI GCATC 3 cut(s) 1684, 1909, 2179
BmtI GCTAGC 1 cut(s) 1002
BpiI GAAGAC 2 cut(s) 287, 336
Bpu10I CCTNAGC 1 cut(s) 578
BpuEI CTTGAG 4 cut(s) 76, 113, 593, 1657
BpuMI CCSGG 1 cut(s) 1933
BsaBI GATNNNNATC 1 cut(s) 591
BsaI GGTCTC 1 cut(s) 2044
Bsc4I CCNNNNNNNGG 4 cut(s) 479, 1117, 1118, 1540
Bse1I ACTGG 1 cut(s) 463
Bse3DI GCAATG 3 cut(s) 1045, 1573, 2150
Bse8I GATNNNNATC 1 cut(s) 591
BseBI CCWGG 1 cut(s) 1905
BseGI GGATG 9 cut(s) 105, 540, 592, 924, 1900, 1928, 1940, 1990, 2077
BseJI GATNNNNATC 1 cut(s) 591
BseLI CCNNNNNNNGG 4 cut(s) 479, 1117, 1118, 1540
BseMI GCAATG 3 cut(s) 1045, 1573, 2150
BseMII CTCAG 4 cut(s) 382, 569, 1746, 1782
BseNI ACTGG 1 cut(s) 463
BseRI GAGGAG 2 cut(s) 1199, 1936
BseSI GKGCMC 3 cut(s) 419, 969, 1450
BseXI GCAGC 2 cut(s) 500, 1126
BseYI CCCAGC 1 cut(s) 1117
BsgI GTGCAG 2 cut(s) 256, 964
BshFI GGCC 4 cut(s) 701, 967, 1724, 1936
BsiHKAI GWGCWC 2 cut(s) 1051, 1126
BsiSI CCGG 2 cut(s) 99, 1932
BslFI GGGAC 1 cut(s) 423
BslI CCNNNNNNNGG 4 cut(s) 479, 1117, 1118, 1540
BsmAI GTCTC 4 cut(s) 1181, 1674, 1735, 2044
BsmFI GGGAC 1 cut(s) 423
BsmI GAATGC 1 cut(s) 2077
BsnI GGCC 4 cut(s) 701, 967, 1724, 1936
Bso31I GGTCTC 1 cut(s) 2044
Bsp120I GGGCCC 1 cut(s) 965
Bsp1286I GDGCHC 5 cut(s) 419, 969, 1051, 1126, 1450
Bsp1407I TGTACA 1 cut(s) 1857
Bsp143I GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
BspACI CCGC 3 cut(s) 419, 443, 1055
BspANI GGCC 4 cut(s) 701, 967, 1724, 1936
BspCNI CTCAG 4 cut(s) 381, 570, 1745, 1781
BspHI TCATGA 3 cut(s) 499, 1216, 1573
BspLI GGNNCC 5 cut(s) 103, 700, 895, 967, 968
BspMI ACCTGC 2 cut(s) 278, 1969
BspOI GCTAGC 1 cut(s) 1002
BspPI GGATC 2 cut(s) 211, 634
BspTNI GGTCTC 1 cut(s) 2044
BsrDI GCAATG 3 cut(s) 1045, 1573, 2150
BsrGI TGTACA 1 cut(s) 1857
BsrI ACTGG 1 cut(s) 463
BssMI GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
BssNAI GTATAC 1 cut(s) 467
Bst1107I GTATAC 1 cut(s) 467
Bst2UI CCWGG 1 cut(s) 1905
Bst4CI ACNGT 3 cut(s) 414, 524, 1192
BstAUI TGTACA 1 cut(s) 1857
BstC8I GCNNGC 5 cut(s) 419, 1000, 1661, 1792, 1821
BstDEI CTNAG 5 cut(s) 23, 368, 578, 1732, 1768
BstENI CCTNNNNNAGG 1 cut(s) 1538
BstF5I GGATG 9 cut(s) 105, 540, 592, 924, 1900, 1928, 1940, 1990, 2077
BstKTI GATC 8 cut(s) 206, 367, 511, 629, 655, 781, 1573, 1912
BstMAI GTCTC 4 cut(s) 1181, 1674, 1735, 2044
BstMBI GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
BstMWI GCNNNNNNNGC 2 cut(s) 145, 1136
BstNI CCWGG 1 cut(s) 1905
BstNSI RCATGY 2 cut(s) 1648, 2067
BstSCI CCNGG 2 cut(s) 1903, 1931
BstSLI GKGCMC 3 cut(s) 419, 969, 1450
BstV1I GCAGC 2 cut(s) 500, 1126
BstV2I GAAGAC 2 cut(s) 287, 336
BstX2I RGATCY 1 cut(s) 1909
BstXI CCANNNNNNTGG 1 cut(s) 170
BstYI RGATCY 1 cut(s) 1909
BstZ17I GTATAC 1 cut(s) 467
BsuI GTATCC 3 cut(s) 148, 354, 620
BsuRI GGCC 4 cut(s) 701, 967, 1724, 1936
BtsCI GGATG 9 cut(s) 105, 540, 592, 924, 1900, 1928, 1940, 1990, 2077
BtsI GCAGTG 2 cut(s) 981, 1743
BtsIMutI CAGTG 3 cut(s) 419, 981, 1743
BveI ACCTGC 2 cut(s) 278, 1969
Cac8I GCNNGC 5 cut(s) 419, 1000, 1661, 1792, 1821
CciI TCATGA 3 cut(s) 499, 1216, 1573
Cfr13I GGNCC 7 cut(s) 245, 699, 965, 966, 1081, 1934, 1993
CseI GACGC 1 cut(s) 1327
Csp6I GTAC 4 cut(s) 1531, 1858, 1871, 2024
CspCI CAANNNNNGTGG 4 cut(s) 892, 927, 2016, 2051
CviQI GTAC 4 cut(s) 1531, 1858, 1871, 2024
DdeI CTNAG 5 cut(s) 23, 368, 578, 1732, 1768
DpnI GATC 8 cut(s) 205, 366, 510, 628, 654, 780, 1572, 1911
DpnII GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
DraI TTTAAA 1 cut(s) 1758
Ecl136II GAGCTC 1 cut(s) 1049
Eco147I AGGCCT 1 cut(s) 1724
Eco24I GRGCYC 2 cut(s) 969, 1051
Eco31I GGTCTC 1 cut(s) 2044
Eco47I GGWCC 3 cut(s) 245, 1081, 1993
Eco53kI GAGCTC 1 cut(s) 1049
Eco57I CTGAAG 3 cut(s) 281, 348, 600
EcoICRI GAGCTC 1 cut(s) 1049
EcoNI CCTNNNNNAGG 1 cut(s) 1538
EcoO109I RGGNCCY 3 cut(s) 699, 965, 966
EcoRI GAATTC 2 cut(s) 753, 1427
EcoRII CCWGG 1 cut(s) 1903
EcoT38I GRGCYC 2 cut(s) 969, 1051
FalI AAGNNNNNCTT 4 cut(s) 954, 986, 1415, 1447
FaqI GGGAC 1 cut(s) 423
FauI CCCGC 2 cut(s) 426, 436
FauNDI CATATG 1 cut(s) 1798
FbaI TGATCA 1 cut(s) 1570
FblI GTMKAC 1 cut(s) 466
Fnu4HI GCNGC 3 cut(s) 489, 1055, 1140
FokI GGATG 9 cut(s) 92, 547, 599, 931, 1887, 1915, 1927, 1997, 2064
FriOI GRGCYC 2 cut(s) 969, 1051
Fsp4HI GCNGC 3 cut(s) 489, 1055, 1140
FspBI CTAG 4 cut(s) 794, 999, 1535, 1874
GluI GCNGC 3 cut(s) 489, 1055, 1140
GsaI CCCAGC 1 cut(s) 1121
HaeIII GGCC 4 cut(s) 701, 967, 1724, 1936
HapII CCGG 2 cut(s) 99, 1932
HgaI GACGC 1 cut(s) 1327
HincII GTYRAC 1 cut(s) 930
HindII GTYRAC 1 cut(s) 930
HindIII AAGCTT 2 cut(s) 259, 1481
HinfI GANTC 8 cut(s) 16, 292, 538, 1301, 1414, 1553, 1709, 1766
HpaI GTTAAC 1 cut(s) 930
HpaII CCGG 2 cut(s) 99, 1932
HphI GGTGA 4 cut(s) 62, 401, 773, 2183
Hpy166II GTNNAC 6 cut(s) 226, 467, 660, 930, 1499, 1858
Hpy188I TCNGA 9 cut(s) 287, 328, 619, 746, 790, 835, 1714, 1735, 2070
Hpy8I GTNNAC 6 cut(s) 226, 467, 660, 930, 1499, 1858
HpyCH4III ACNGT 3 cut(s) 414, 524, 1192
HpyCH4IV ACGT 1 cut(s) 134
HpyF10VI GCNNNNNNNGC 2 cut(s) 145, 1136
HpyF3I CTNAG 5 cut(s) 23, 368, 578, 1732, 1768
HpySE526I ACGT 1 cut(s) 134
Ksp22I TGATCA 1 cut(s) 1570
KspAI GTTAAC 1 cut(s) 930
Kzo9I GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
LmnI GCTCC 4 cut(s) 107, 1046, 1121, 1335
Lsp1109I GCAGC 2 cut(s) 500, 1126
LweI GCATC 3 cut(s) 1684, 1909, 2179
MaeI CTAG 4 cut(s) 794, 999, 1535, 1874
MaeII ACGT 1 cut(s) 134
MaeIII GTNAC 5 cut(s) 50, 59, 454, 803, 1640
MalI GATC 8 cut(s) 205, 366, 510, 628, 654, 780, 1572, 1911
MboI GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
MboII GAAGA 6 cut(s) 287, 341, 507, 1304, 1409, 2062
MfeI CAATTG 3 cut(s) 1668, 1774, 1977
MflI RGATCY 1 cut(s) 1909
MhlI GDGCHC 5 cut(s) 419, 969, 1051, 1126, 1450
MlyI GAGTC 2 cut(s) 301, 1760
MmeI TCCRAC 4 cut(s) 564, 972, 1024, 1574
MroXI GAANNNNTTC 1 cut(s) 1011
MseI TTAA 6 cut(s) 141, 713, 800, 929, 1562, 1757
MspI CCGG 2 cut(s) 99, 1932
MspR9I CCNGG 2 cut(s) 1905, 1933
MunI CAATTG 3 cut(s) 1668, 1774, 1977
Mva1269I GAATGC 1 cut(s) 2077
MvaI CCWGG 1 cut(s) 1905
MwoI GCNNNNNNNGC 2 cut(s) 145, 1136
NciI CCSGG 1 cut(s) 1933
NdeI CATATG 1 cut(s) 1798
NdeII GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
NheI GCTAGC 1 cut(s) 998
NlaIV GGNNCC 5 cut(s) 103, 700, 895, 967, 968
NmuCI GTSAC 2 cut(s) 50, 803
NspI RCATGY 2 cut(s) 1648, 2067
PagI TCATGA 3 cut(s) 499, 1216, 1573
PceI AGGCCT 1 cut(s) 1724
PctI GAATGC 1 cut(s) 2077
PdmI GAANNNNTTC 1 cut(s) 1011
PfeI GAWTC 6 cut(s) 16, 538, 1301, 1414, 1553, 1709
PfoI TCCNGGA 1 cut(s) 1903
PkrI GCNGC 3 cut(s) 490, 1056, 1141
PleI GAGTC 2 cut(s) 300, 1760
PpsI GAGTC 2 cut(s) 300, 1760
Psp124BI GAGCTC 1 cut(s) 1051
Psp6I CCWGG 1 cut(s) 1903
PspFI CCCAGC 1 cut(s) 1117
PspGI CCWGG 1 cut(s) 1903
PspN4I GGNNCC 5 cut(s) 103, 700, 895, 967, 968
PspOMI GGGCCC 1 cut(s) 965
PspPI GGNCC 7 cut(s) 245, 699, 965, 966, 1081, 1934, 1993
PsuI RGATCY 1 cut(s) 1909
RsaI GTAC 4 cut(s) 1532, 1859, 1872, 2025
RsaNI GTAC 4 cut(s) 1531, 1858, 1871, 2024
SacI GAGCTC 1 cut(s) 1051
SaqAI TTAA 6 cut(s) 141, 713, 800, 929, 1562, 1757
SatI GCNGC 3 cut(s) 489, 1055, 1140
Sau3AI GATC 8 cut(s) 203, 364, 508, 626, 652, 778, 1570, 1909
Sau96I GGNCC 7 cut(s) 245, 699, 965, 966, 1081, 1934, 1993
ScaI AGTACT 1 cut(s) 1872
SchI GAGTC 2 cut(s) 301, 1760
ScrFI CCNGG 2 cut(s) 1905, 1933
SduI GDGCHC 5 cut(s) 419, 969, 1051, 1126, 1450
SfaNI GCATC 3 cut(s) 1684, 1909, 2179
SinI GGWCC 3 cut(s) 245, 1081, 1993
SmlI CTYRAG 4 cut(s) 55, 128, 572, 1636
SmoI CTYRAG 4 cut(s) 55, 128, 572, 1636
SseBI AGGCCT 1 cut(s) 1724
SsiI CCGC 3 cut(s) 419, 443, 1055
SspI AATATT 2 cut(s) 190, 1310
SspMI CTAG 4 cut(s) 794, 999, 1535, 1874
SstI GAGCTC 1 cut(s) 1051
StuI AGGCCT 1 cut(s) 1724
StyD4I CCNGG 2 cut(s) 1903, 1931
TaaI ACNGT 3 cut(s) 414, 524, 1192
TaiI ACGT 1 cut(s) 137
TaqI TCGA 3 cut(s) 507, 1678, 2187
TatI WGTACW 2 cut(s) 1857, 1870
TauI GCSGC 1 cut(s) 1057
TfiI GAWTC 6 cut(s) 16, 538, 1301, 1414, 1553, 1709
Tru1I TTAA 6 cut(s) 141, 713, 800, 929, 1562, 1757
Tru9I TTAA 6 cut(s) 141, 713, 800, 929, 1562, 1757
TscAI CASTG 3 cut(s) 419, 988, 1750
TseFI GTSAC 2 cut(s) 50, 803
TseI GCWGC 2 cut(s) 488, 1139
Tsp45I GTSAC 2 cut(s) 50, 803
TspRI CASTG 3 cut(s) 419, 988, 1750
VpaK11BI GGWCC 3 cut(s) 245, 1081, 1993
XagI CCTNNNNNAGG 1 cut(s) 1538
XapI RAATTY 8 cut(s) 495, 620, 668, 724, 753, 1224, 1246, 1427
XceI RCATGY 2 cut(s) 1648, 2067
XcmI CCANNNNNNNNNTGG 1 cut(s) 955
XmiI GTMKAC 1 cut(s) 466
XmnI GAANNNNTTC 1 cut(s) 1011
XspI CTAG 4 cut(s) 794, 999, 1535, 1874
ZrmI AGTACT 1 cut(s) 1872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.