Rmu_sc0002344.1_g000016

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002344.1
Physical Location & Seq
Reverse (-)
58800 .. 61879
3080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002344.1_g000016.1.cds

Sequence Viewer

Length: 2991 bp
atgagatcatttctagcttactttcttttgtgtgttcacctcgtttcatcaccaaacaatgcttttgcttcttttagttctggttcgagttctagtgaagcaaaggcccttctaaaatggaaaggcagttttcaaaaccaaagccagaataatctgacctcatggacttactctcccagtaattccaccaatccaagagcaaatgcaagtccatgcaatggttggacaggcatttcatgcaacactattggaagtgtcaacaggataaacctcagcaattctggtattcaaggtacgcttcgtgaattatcattcttgtccttccctaatcttgaatatcttgaacttagcatcaatgaacttcatgatgccatcccacctcagattagttccctctccaaactcatctatcttgatctgtcttctaatcatttgtctgggcaaatcccaccagaaattggtcttctaacaaaacttgaggtccttcacctaaatgataacaagttaaatggctcgattcctcacgagattggtcaacttaagtttctttctgagcttgctctgagccagaacagtctagaaggtgtgattccgggttctctgggtaatttgaacaacctgatttcgttgtttctccatcaaaatcaactttccggttctatacctgcttctctaggcagtctgagcaacctgactactttgaatctccatagaaatcaactttctggttcaatcccaccatctttaggtgatctgacaaaccttacctttctcttcctctaccaaaataacctatctggaaccattccggaacagattgggaacttgaaatcaatggtggatctagagttggctatgaatcaactcaatggttccattcccccttcaattggtggcttgagtaatttagttttcttatacctccgtgataatcaactttctggctccatcccccaagagatagggaatctcaagaagttgactgtactcgagttggatactaaccaactttctggtcatttaccccaaaatatttgccgtggtggatcactgcaaaactttacagcaaattccaaccaattgacgggtccaatacccaaaagcatgaaaatatgcaagagtttagtaagagtctaccttcaagataaccatttgacaggcaatatatctgaagaatttggtgcctatccatatctttacattgtagaccttagccgcaacaacttctacggtgaaatttcacccatgtggggactttgtcctcagttagcaaccctacgaattgcaggaaacaacctgactggcagcatcccacctgagataggcaatgcaacccaaattcaagcactcgatctttcttcaaatggtttagttggggtgattccaaatgagataaggagtttgacttctttgctgagtctgaatttgaaaggtaatcaactttcgggtcacatgccttcagaattcgattcattgaaggatcttgaatatcttgacctgtcaaccaacagattgaatgagtcaattccaagcattttaggtaatttttctaaaatacactacttgaatttgagcaacaacaaattcagccaagaaattccatttcaattgggaaatttagtccacctgtcccagctagacttgagttacaattcacttgaggatcaaataccatcagaaattagccaaatgcaaagcttggaaattctgaatatttcccacaacaatctttctggtttaatacccaaaaatttcgaacaaatgcatagcttggttcaaattgacttatcctacaaccagctgcagggtcccgtccccaacaacaaagcatttcaagaaggcgctttagaaggcaatgaacgattgtgtggcaatgttgcaggaattcaaccctgcaataagcattcctcaaaaacagatcgaagacacttgtttttaattgttttccctattttgggaacacttttacttgtacttgcagtccttgcaattgccttggttggaaaaagaagaaaaacagagcaggacacggggcagagcgatgtgcagcacaaggaagttttttccatatctgaattcgatggaagaatgatgtatgaagaaatcatcaaggcaaccaatgattttgatgctctgtattgcatcggaaaggggcgatccggaagtgcgtacaaggcaaagctgatatccggcagcatagttgcagtgaagaaactccacccaacacttgatggtgaggagacgtctcgtaaggaattcctaaacgaaataagggcactcctagagatacggcaccggaacattgtgaaacttcgtggtttctgttcacatgcccatcactcgtttttggtgtatgaatacatagaaaaaggtagtttggcttcaatcttgagcaaagaatacgaagctaacaaactggactggagcacaagggtgaggattgtgaaaggtgtagctcatgccctctcttatatgcaccatgattgctctccccctattgtgcatcgagacatatcaagcaacaacatactgctcgattacgaatatgagcccgttgtttcagactttggcaccgctaagcttttaaatccagactcatcgaattggactgcacgcgcaggcacatatggatatatagcaccagagcttgcttatacaatgaaggttaccgagaaatgtgatgtttatagctatggagcgctggcactggaagtgataatgggaaggcagctggctgattttatgtcctccttttcgacttcatccgccaatggagacatattgctaaaggatgttttcgaccaacgcctcccccctcctccaccgaaaattgagaatgaactgataacaattgctaggctagcaattgcatgcaaacattcccatccacaatccaggccaacaatgtacatggtttctcaagtgttgtcatcccaacctgcaaattcctctagactaccagagattactattgaacaactcattaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

996

Amino Acids

109.7

Weight (kDa)

6.17

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2246
Acc36I ACCTGC 2 cut(s) 673, 2947
AccB1I GGYRCC 3 cut(s) 1181, 2292, 2570
AccB7I CCANNNNNTGG 2 cut(s) 218, 458
AccI GTMKAC 2 cut(s) 1134, 1206
AccII CGCG 1 cut(s) 2616
AccIII TCCGGA 2 cut(s) 808, 2159
AciI CCGC 3 cut(s) 1216, 2574, 2766
AclWI GGATC 5 cut(s) 849, 1054, 1488, 1671, 2151
AcuI CTGAAG 2 cut(s) 1191, 1443
AcyI GRCGYC 1 cut(s) 2243
AfaI GTAC 5 cut(s) 295, 987, 1974, 2171, 2909
AfeI AGCGCT 1 cut(s) 2700
AflII CTTAAG 1 cut(s) 539
AjnI CCWGG 1 cut(s) 2894
AleI CACNNNNGTG 2 cut(s) 1246, 2432
Alw21I GWGCWC 1 cut(s) 2429
Alw26I GTCTC 4 cut(s) 2234, 2250, 2502, 2769
AlwI GGATC 5 cut(s) 849, 1054, 1488, 1671, 2151
Ama87I CYCGRG 1 cut(s) 989
Aor13HI TCCGGA 2 cut(s) 808, 2159
Aor51HI AGCGCT 1 cut(s) 2700
AoxI GGCC 2 cut(s) 105, 2897
ApeKI GCWGC 5 cut(s) 1305, 1801, 2047, 2193, 2728
AseI ATTAAT 1 cut(s) 2985
AspLEI GCGC 3 cut(s) 1844, 2618, 2701
AspS9I GGNCC 4 cut(s) 106, 481, 1088, 1808
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 9 cut(s) 29, 42, 479, 761, 1233, 1244, 1390, 2246, 2446
AsuII TTCGAA 1 cut(s) 1755
AsuNHI GCTAGC 1 cut(s) 2860
AvaI CYCGRG 1 cut(s) 989
AvaII GGWCC 3 cut(s) 481, 1088, 1808
BaeGI GKGCMC 1 cut(s) 2278
BanI GGYRCC 3 cut(s) 1181, 2292, 2570
BanII GRGCYC 1 cut(s) 2553
BarI GAAGNNNNNNTAC 2 cut(s) 2365, 2397
BauI CACGAG 1 cut(s) 524
BbsI GAAGAC 3 cut(s) 414, 455, 1930
Bbv12I GWGCWC 1 cut(s) 2429
BbvCI CCTCAGC 1 cut(s) 272
BbvI GCAGC 5 cut(s) 1317, 1788, 2059, 2205, 2740
BccI CCATC 9 cut(s) 380, 645, 748, 956, 1681, 2075, 2225, 2343, 2892
BceAI ACGGC 2 cut(s) 1023, 2306
BciT130I CCWGG 1 cut(s) 2896
BciVI GTATCC 1 cut(s) 991
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 4 cut(s) 2234, 2250, 2502, 2769
BfmI CTRYAG 1 cut(s) 1802
BfoI RGCGCY 2 cut(s) 1845, 2702
BfrI CTTAAG 1 cut(s) 539
BfuAI ACCTGC 2 cut(s) 673, 2947
BfuI GTATCC 1 cut(s) 991
BisI GCNGC 6 cut(s) 1216, 1306, 1802, 2048, 2194, 2729
BlpI GCTNAGC 1 cut(s) 2577
BlsI GCNGC 6 cut(s) 1217, 1307, 1803, 2049, 2195, 2730
Bme1390I CCNGG 2 cut(s) 594, 2896
Bme18I GGWCC 3 cut(s) 481, 1088, 1808
BmeT110I CYCGRG 1 cut(s) 989
BmgT120I GGNCC 4 cut(s) 106, 481, 1088, 1808
BmiI GGNNCC 9 cut(s) 802, 874, 946, 1089, 1183, 1809, 1810, 2294, 2572
BmrFI CCNGG 2 cut(s) 594, 2896
BmrI ACTGGG 1 cut(s) 171
BmsI GCATC 6 cut(s) 358, 360, 1317, 2119, 2151, 2512
BmtI GCTAGC 1 cut(s) 2864
BmuI ACTGGG 1 cut(s) 171
BpiI GAAGAC 3 cut(s) 414, 455, 1930
BpmI CTGGAG 1 cut(s) 2443
Bpu10I CCTNAGC 2 cut(s) 272, 1211
Bpu1102I GCTNAGC 1 cut(s) 2577
Bpu14I TTCGAA 1 cut(s) 1755
BpuEI CTTGAG 7 cut(s) 497, 919, 956, 1663, 1679, 2410, 2904
BpuMI CCSGG 1 cut(s) 594
BsaHI GRCGYC 1 cut(s) 2243
BsaJI CCNNGG 2 cut(s) 1039, 1995
BsaWI WCCGGW 4 cut(s) 653, 808, 2159, 2295
BsaXI ACNNNNNCTCC 2 cut(s) 157, 187
Bse1I ACTGG 5 cut(s) 177, 1306, 2421, 2426, 2712
Bse3DI GCAATG 4 cut(s) 223, 1333, 1861, 1879
BseAI TCCGGA 2 cut(s) 808, 2159
BseBI CCWGG 1 cut(s) 2896
BseDI CCNNGG 2 cut(s) 1039, 1995
BseGI GGATG 7 cut(s) 372, 948, 1308, 2762, 2797, 2884, 2930
BseMI GCAATG 4 cut(s) 223, 1333, 1861, 1879
BseMII CTCAG 8 cut(s) 286, 395, 543, 554, 674, 1277, 1308, 1406
BseNI ACTGG 5 cut(s) 177, 1306, 2421, 2426, 2712
BseRI GAGGAG 2 cut(s) 2252, 2808
BseSI GKGCMC 1 cut(s) 2278
BseXI GCAGC 5 cut(s) 1317, 1788, 2059, 2205, 2740
BseYI CCCAGC 1 cut(s) 1632
BsgI GTGCAG 2 cut(s) 2066, 2595
Bsh1236I CGCG 1 cut(s) 2616
BshFI GGCC 2 cut(s) 107, 2899
BshNI GGYRCC 3 cut(s) 1181, 2292, 2570
BsiHKAI GWGCWC 1 cut(s) 2429
BsiHKCI CYCGRG 1 cut(s) 989
BsiSI CCGG 6 cut(s) 593, 654, 809, 2160, 2190, 2296
BslFI GGGAC 4 cut(s) 1266, 1615, 1794, 1799
BsmAI GTCTC 4 cut(s) 2234, 2250, 2502, 2769
BsmBI CGTCTC 2 cut(s) 2234, 2250
BsmFI GGGAC 4 cut(s) 1266, 1615, 1794, 1799
BsmI GAATGC 1 cut(s) 1903
BsnI GGCC 2 cut(s) 107, 2899
BsoBI CYCGRG 1 cut(s) 989
Bsp119I TTCGAA 1 cut(s) 1755
Bsp1286I GDGCHC 3 cut(s) 2278, 2429, 2553
Bsp13I TCCGGA 2 cut(s) 808, 2159
Bsp1407I TGTACA 1 cut(s) 2907
Bsp1720I GCTNAGC 1 cut(s) 2577
BspACI CCGC 3 cut(s) 1216, 2574, 2766
BspANI GGCC 2 cut(s) 107, 2899
BspCNI CTCAG 8 cut(s) 285, 394, 544, 555, 675, 1276, 1309, 1407
BspEI TCCGGA 2 cut(s) 808, 2159
BspFNI CGCG 1 cut(s) 2616
BspHI TCATGA 1 cut(s) 364
BspLI GGNNCC 9 cut(s) 802, 874, 946, 1089, 1183, 1809, 1810, 2294, 2572
BspMAI CTGCAG 1 cut(s) 1806
BspMI ACCTGC 2 cut(s) 673, 2947
BspOI GCTAGC 1 cut(s) 2864
BspPI GGATC 5 cut(s) 849, 1054, 1488, 1671, 2151
BspT104I TTCGAA 1 cut(s) 1755
BspT107I GGYRCC 3 cut(s) 1181, 2292, 2570
BspTI CTTAAG 1 cut(s) 539
BsrDI GCAATG 4 cut(s) 223, 1333, 1861, 1879
BsrGI TGTACA 1 cut(s) 2907
BsrI ACTGG 5 cut(s) 177, 1306, 2421, 2426, 2712
BssECI CCNNGG 2 cut(s) 1039, 1995
BssNI GRCGYC 1 cut(s) 2243
BssSI CACGAG 1 cut(s) 524
BssT1I CCWWGG 1 cut(s) 1995
Bst2BI CACGAG 1 cut(s) 524
Bst2UI CCWGG 1 cut(s) 2896
Bst4CI ACNGT 3 cut(s) 575, 985, 1232
Bst6I CTCTTC 1 cut(s) 779
BstACI GRCGYC 1 cut(s) 2243
BstAFI CTTAAG 1 cut(s) 539
BstAPI GCANNNNNTGC 2 cut(s) 237, 1985
BstAUI TGTACA 1 cut(s) 2907
BstBI TTCGAA 1 cut(s) 1755
BstC8I GCNNGC 8 cut(s) 558, 2614, 2620, 2649, 2703, 2733, 2862, 2872
BstDSI CCRYGG 1 cut(s) 1039
BstEII GGTNACC 1 cut(s) 2665
BstENI CCTNNNNNAGG 1 cut(s) 1320
BstF5I GGATG 7 cut(s) 372, 948, 1308, 2762, 2797, 2884, 2930
BstFNI CGCG 1 cut(s) 2616
BstH2I RGCGCY 2 cut(s) 1845, 2702
BstHHI GCGC 3 cut(s) 1844, 2618, 2701
BstMAI GTCTC 4 cut(s) 2234, 2250, 2502, 2769
BstMWI GCNNNNNNNGC 5 cut(s) 237, 684, 1985, 2174, 2861
BstNI CCWGG 1 cut(s) 2896
BstNSI RCATGY 3 cut(s) 1456, 2333, 2874
BstPI GGTNACC 1 cut(s) 2665
BstSCI CCNGG 2 cut(s) 592, 2894
BstSFI CTRYAG 1 cut(s) 1802
BstSLI GKGCMC 1 cut(s) 2278
BstUI CGCG 1 cut(s) 2616
BstV1I GCAGC 5 cut(s) 1317, 1788, 2059, 2205, 2740
BstV2I GAAGAC 3 cut(s) 414, 455, 1930
BstX2I RGATCY 2 cut(s) 841, 1480
BstXI CCANNNNNNTGG 1 cut(s) 1013
BstYI RGATCY 2 cut(s) 841, 1480
BsuI GTATCC 1 cut(s) 991
BsuRI GGCC 2 cut(s) 107, 2899
BtgI CCRYGG 1 cut(s) 1039
BtgZI GCGATG 1 cut(s) 2055
BtsCI GGATG 7 cut(s) 372, 948, 1308, 2762, 2797, 2884, 2930
BtsI GCAGTG 2 cut(s) 1049, 2211
BtsIMutI CAGTG 3 cut(s) 1049, 2211, 2705
BveI ACCTGC 2 cut(s) 673, 2947
Cac8I GCNNGC 8 cut(s) 558, 2614, 2620, 2649, 2703, 2733, 2862, 2872
CciI TCATGA 1 cut(s) 364
CfoI GCGC 3 cut(s) 1844, 2618, 2701
Cfr13I GGNCC 4 cut(s) 106, 481, 1088, 1808
Csp6I GTAC 5 cut(s) 294, 986, 1973, 2170, 2908
CviQI GTAC 5 cut(s) 294, 986, 1973, 2170, 2908
DraI TTTAAA 1 cut(s) 2586
Eam1104I CTCTTC 1 cut(s) 779
EarI CTCTTC 1 cut(s) 779
EciI GGCGGA 1 cut(s) 2755
Eco130I CCWWGG 1 cut(s) 1995
Eco24I GRGCYC 1 cut(s) 2553
Eco32I GATATC 1 cut(s) 2187
Eco47I GGWCC 3 cut(s) 481, 1088, 1808
Eco47III AGCGCT 1 cut(s) 2700
Eco57I CTGAAG 2 cut(s) 1191, 1443
Eco88I CYCGRG 1 cut(s) 989
Eco91I GGTNACC 1 cut(s) 2665
EcoNI CCTNNNNNAGG 1 cut(s) 1320
EcoO109I RGGNCCY 3 cut(s) 106, 481, 1808
EcoO65I GGTNACC 1 cut(s) 2665
EcoRI GAATTC 4 cut(s) 1463, 1884, 2075, 2255
EcoRII CCWGG 1 cut(s) 2894
EcoRV GATATC 1 cut(s) 2187
EcoT14I CCWWGG 1 cut(s) 1995
EcoT22I ATGCAT 1 cut(s) 1767
EcoT38I GRGCYC 1 cut(s) 2553
ErhI CCWWGG 1 cut(s) 1995
Esp3I CGTCTC 2 cut(s) 2234, 2250
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FaqI GGGAC 4 cut(s) 1266, 1615, 1794, 1799
FauNDI CATATG 1 cut(s) 2626
FblI GTMKAC 2 cut(s) 1134, 1206
Fnu4HI GCNGC 6 cut(s) 1216, 1306, 1802, 2048, 2194, 2729
FokI GGATG 7 cut(s) 359, 935, 1295, 2749, 2804, 2871, 2917
FriOI GRGCYC 1 cut(s) 2553
Fsp4HI GCNGC 6 cut(s) 1216, 1306, 1802, 2048, 2194, 2729
GlaI GCGC 3 cut(s) 1843, 2617, 2700
GluI GCNGC 6 cut(s) 1216, 1306, 1802, 2048, 2194, 2729
GsaI CCCAGC 1 cut(s) 1636
GsuI CTGGAG 1 cut(s) 2443
HaeII RGCGCY 2 cut(s) 1845, 2702
HaeIII GGCC 2 cut(s) 107, 2899
HapII CCGG 6 cut(s) 593, 654, 809, 2160, 2190, 2296
HhaI GCGC 3 cut(s) 1844, 2618, 2701
Hin1I GRCGYC 1 cut(s) 2243
Hin6I GCGC 3 cut(s) 1842, 2616, 2699
HinP1I GCGC 3 cut(s) 1842, 2616, 2699
HincII GTYRAC 4 cut(s) 259, 536, 981, 1503
HindII GTYRAC 4 cut(s) 259, 536, 981, 1503
HindIII AAGCTT 2 cut(s) 1696, 2579
HpaII CCGG 6 cut(s) 593, 654, 809, 2160, 2190, 2296
HphI GGTGA 9 cut(s) 29, 42, 479, 761, 1233, 1244, 1390, 2246, 2446
Hpy166II GTNNAC 9 cut(s) 37, 259, 536, 981, 1135, 1207, 1503, 1624, 2327
Hpy8I GTNNAC 9 cut(s) 37, 259, 536, 981, 1135, 1207, 1503, 1624, 2327
HpyCH4III ACNGT 3 cut(s) 575, 985, 1232
HpyCH4IV ACGT 1 cut(s) 2243
HpyF10VI GCNNNNNNNGC 5 cut(s) 237, 684, 1985, 2174, 2861
HpySE526I ACGT 1 cut(s) 2243
Hsp92I GRCGYC 1 cut(s) 2243
HspAI GCGC 3 cut(s) 1842, 2616, 2699
KflI GGGWCCC 1 cut(s) 1808
Kpn2I TCCGGA 2 cut(s) 808, 2159
LmnI GCTCC 3 cut(s) 950, 2424, 2696
Lsp1109I GCAGC 5 cut(s) 1317, 1788, 2059, 2205, 2740
LweI GCATC 6 cut(s) 358, 360, 1317, 2119, 2151, 2512
MaeII ACGT 1 cut(s) 2243
MaeIII GTNAC 3 cut(s) 1448, 1646, 2665
MfeI CAATTG 6 cut(s) 888, 1079, 1607, 1989, 2850, 2865
MflI RGATCY 2 cut(s) 841, 1480
MhlI GDGCHC 3 cut(s) 2278, 2429, 2553
MlyI GAGTC 4 cut(s) 1140, 1426, 1529, 2588
MmeI TCCRAC 4 cut(s) 203, 975, 1098, 1981
Mph1103I ATGCAT 1 cut(s) 1767
MroI TCCGGA 2 cut(s) 808, 2159
MseI TTAA 6 cut(s) 506, 540, 1739, 1937, 2585, 2985
MslI CAYNNNNRTG 3 cut(s) 492, 1246, 2432
MspA1I CMGCKG 2 cut(s) 1801, 2731
MspCI CTTAAG 1 cut(s) 539
MspI CCGG 6 cut(s) 593, 654, 809, 2160, 2190, 2296
MspR9I CCNGG 2 cut(s) 594, 2896
MunI CAATTG 6 cut(s) 888, 1079, 1607, 1989, 2850, 2865
Mva1269I GAATGC 1 cut(s) 1903
MvaI CCWGG 1 cut(s) 2896
MvnI CGCG 1 cut(s) 2616
MwoI GCNNNNNNNGC 5 cut(s) 237, 684, 1985, 2174, 2861
NciI CCSGG 1 cut(s) 594
NdeI CATATG 1 cut(s) 2626
NheI GCTAGC 1 cut(s) 2860
NlaIV GGNNCC 9 cut(s) 802, 874, 946, 1089, 1183, 1809, 1810, 2294, 2572
NmuCI GTSAC 1 cut(s) 1448
NsiI ATGCAT 1 cut(s) 1767
NspI RCATGY 3 cut(s) 1456, 2333, 2874
NspV TTCGAA 1 cut(s) 1755
OliI CACNNNNGTG 2 cut(s) 1246, 2432
PaeI GCATGC 1 cut(s) 2874
PaeR7I CTCGAG 1 cut(s) 989
PagI TCATGA 1 cut(s) 364
PctI GAATGC 1 cut(s) 1903
PfeI GAWTC 7 cut(s) 517, 589, 703, 859, 967, 1381, 1469
PflFI GACNNNGTC 1 cut(s) 1257
PflMI CCANNNNNTGG 2 cut(s) 218, 458
PkrI GCNGC 6 cut(s) 1217, 1307, 1803, 2049, 2195, 2730
PleI GAGTC 4 cut(s) 1139, 1425, 1528, 2588
PpsI GAGTC 4 cut(s) 1139, 1425, 1528, 2588
PpuMI RGGWCCY 2 cut(s) 481, 1808
PshBI ATTAAT 1 cut(s) 2985
Psp5II RGGWCCY 2 cut(s) 481, 1808
Psp6I CCWGG 1 cut(s) 2894
PspEI GGTNACC 1 cut(s) 2665
PspFI CCCAGC 1 cut(s) 1632
PspGI CCWGG 1 cut(s) 2894
PspN4I GGNNCC 9 cut(s) 802, 874, 946, 1089, 1183, 1809, 1810, 2294, 2572
PspPI GGNCC 4 cut(s) 106, 481, 1088, 1808
PspPPI RGGWCCY 2 cut(s) 481, 1808
PspXI VCTCGAGB 1 cut(s) 989
PstI CTGCAG 1 cut(s) 1806
PsuI RGATCY 2 cut(s) 841, 1480
PsyI GACNNNGTC 1 cut(s) 1257
PvuII CAGCTG 2 cut(s) 1801, 2731
RsaI GTAC 5 cut(s) 295, 987, 1974, 2171, 2909
RsaNI GTAC 5 cut(s) 294, 986, 1973, 2170, 2908
RseI CAYNNNNRTG 3 cut(s) 492, 1246, 2432
SaqAI TTAA 6 cut(s) 506, 540, 1739, 1937, 2585, 2985
SatI GCNGC 6 cut(s) 1216, 1306, 1802, 2048, 2194, 2729
Sau96I GGNCC 4 cut(s) 106, 481, 1088, 1808
SchI GAGTC 4 cut(s) 1140, 1426, 1529, 2588
ScrFI CCNGG 2 cut(s) 594, 2896
SduI GDGCHC 3 cut(s) 2278, 2429, 2553
SfaNI GCATC 6 cut(s) 358, 360, 1317, 2119, 2151, 2512
SfcI CTRYAG 1 cut(s) 1802
Sfr274I CTCGAG 1 cut(s) 989
SfuI TTCGAA 1 cut(s) 1755
SinI GGWCC 3 cut(s) 481, 1088, 1808
SlaI CTCGAG 1 cut(s) 989
SmiMI CAYNNNNRTG 3 cut(s) 492, 1246, 2432
SmlI CTYRAG 9 cut(s) 476, 539, 898, 971, 989, 1642, 1658, 2389, 2919
SmoI CTYRAG 9 cut(s) 476, 539, 898, 971, 989, 1642, 1658, 2389, 2919
SphI GCATGC 1 cut(s) 2874
SsiI CCGC 3 cut(s) 1216, 2574, 2766
SspI AATATT 2 cut(s) 1033, 1714
StyD4I CCNGG 2 cut(s) 592, 2894
StyI CCWWGG 1 cut(s) 1995
TaaI ACNGT 3 cut(s) 575, 985, 1232
TaiI ACGT 1 cut(s) 2246
TatI WGTACW 3 cut(s) 985, 1972, 2907
TauI GCSGC 1 cut(s) 1218
TfiI GAWTC 7 cut(s) 517, 589, 703, 859, 967, 1381, 1469
Tru1I TTAA 6 cut(s) 506, 540, 1739, 1937, 2585, 2985
Tru9I TTAA 6 cut(s) 506, 540, 1739, 1937, 2585, 2985
TscAI CASTG 3 cut(s) 1056, 2211, 2712
TseFI GTSAC 1 cut(s) 1448
TseI GCWGC 5 cut(s) 1305, 1801, 2047, 2193, 2728
Tsp45I GTSAC 1 cut(s) 1448
TspGWI ACGGA 1 cut(s) 914
TspRI CASTG 3 cut(s) 1056, 2211, 2712
Tth111I GACNNNGTC 1 cut(s) 1257
Van91I CCANNNNNTGG 2 cut(s) 218, 458
Vha464I CTTAAG 1 cut(s) 539
VpaK11BI GGWCC 3 cut(s) 481, 1088, 1808
VspI ATTAAT 1 cut(s) 2985
XagI CCTNNNNNAGG 1 cut(s) 1320
XbaI TCTAGA 3 cut(s) 577, 844, 2951
XceI RCATGY 3 cut(s) 1456, 2333, 2874
XcmI CCANNNNNNNNNTGG 1 cut(s) 219
XhoI CTCGAG 1 cut(s) 989
XmiI GTMKAC 2 cut(s) 1134, 1206
ZraI GACGTC 1 cut(s) 2244
Zsp2I ATGCAT 1 cut(s) 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.