pycom15g38580

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
38338391 .. 38340902
2512 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g38580.1

Sequence Viewer

Length: 2172 bp
ATGACCAACTTGGAATCTTTATACCTAAATGTGAACCAACTCTTTGGCCCCATCCCACAAGAGATAGAGAACTTAAAGAATTTGACTGCTCTAATATTGCATGATAACCATTTTTCTGGTTATGTACCCCAAAATATTTGCAGCAGTGGACTCCTCAAAAACTTTTCAATATCCAATAACCATTTGACTGGTCAAATCCCCAAAAGCTTGAAAATCTGCACAAGCTTATTCAGAGTTCGTCTTGATGGAAACAAGTTGACAGGAAATATGTCTGAAGACTTTGGGGTCTATCCAAATCTTTATTTTATGGATATAAGCCACAATAACTTCTACGGGGAAATCTTACAAACTTGGGGACAATGCCCGCAATTAGAAACCCTACTAATTGCGGGAAACAACCTTACTGGTAACATACCTCCTGATATTGTCAATGCACAAAAACTTCATGAGCTAGATCTTTCTTCAAATCACTTAGTTGGGGCGATTCCGAAGGGATTCAGGAGAATGACTTCTTTGCTGAAGTTGACGTTGAATGGAAATCAACTTTCAGGCCCTATATCATCGGAATTTGGATCGATAATTAATCTTGAATATCTTGACTTGTCATCAAACAAATTCAACGGGTTAGTTCCTACCAATCTAGGTGCCTTTCTCAGACTGCACCATCTGAATTTAAGCAACAACAACTTTTCTCAAGGAATTCCACCTGAATTGGGGAAGTTAGTTCAGTTGAACGAACTTGATTTAAGTTACAACTCACTTGAAGGTAGTATACCACCAGAAATCACCAATATGGAGAGTTTGGAGATGCTCAATCTTTCCCACAACAATCTTTCGGGTTTCATACCATCAAGTATCGAAGGCATGCTCAGCTTATTGTATGTTGACATATCTTACAATGAATTGGAAGGTCCTCTTCCCAACAACAAAGCGTTTCAAGAAGCTCCCCCACAAGCTGTACAAGGGAACAAAGGATTGTGCGGCAATATTACATCTTTGCAACCCTGTACGCATGGCTCAAGAAAGAACCACAAGTGGGTATTTGTAATCTCATTCACCCTTCTATCAGCAGTTTTCCTTCTTTGTGCTTCCTTTACAATTGTCTTCGTAGTGGAAAGAAAGAAGAAACATCGGGATAAAGGAGAAAAAAATATGCATGAAGAAGTATCGTTTTCAATTTTGAATTTTGATGGAATGTCAATGTATGAGGAAATCATAAGGGCGACCGAAAACTTTGATTCCATATATTGCATCGGGAGCGGAGGACAAGGAAGTGTCTACAAAGCAAACTTGTCATCAACCATCATAGTGGCTGTGAAGAAACTCCATCACTTGTGGGATGGCGAGAAGAACTTGGAGGCAGGATTCTTGAATGAAATAAAAGCAATGACAGAGGTAAGACACCGGAACATTGTGAAGTTTTATGGTTTCTGTTTGCACCACAGACACTCTTTCTTGGTGTGCGAGTTTCTTGAAAGAGGTAGCCTGGCTAAAATTTTGAGCGAAGATGAAAAAGCTAAAGAAGTGGGATGGAGAAAAAGGGTGAATATTGTTAACGGTGTAGCTAATGCCTTAGCATATATGCACCACGACGTTGTGCCACCAATTGTTCACCGGGATATATCAAGCAAGAACATTTTGCTGGATTTTGAATATGAGGCCTTGGTTTCAGACTTTGGCACTGCTAAGTTTCTGAATCGAGACTCAACTAATTGGACTGCTGTTGCAGGCACATGTGGATATATTGCACCAGGTATAATTGTTCTCTGTTCTATATATTCTTTTACAATGGAAGTGAATGATAAATGCGATGTTTATAGCTTTGGAGTGGTCGCATTGGAAATAATTATGGGGAGGCATCCCGAAGATTTTTTCTCTTCACTCTCAACAATGCCTTATTCATTCTCGTCATCATCATCTGCGTTACTAGCCCATCAAATAACAATTGTGGATGTTCTGGACCAACGCATTTTGCCTCCAACGCATCAAGAAGCAGGGGAAGTTCTCTCTCTTGTGAAGATTGCGTTTTCATGCTTGCATCCCAGTCCGCAATCTCGTCCAACAATGAAACAAGCTTCTCAACTCCTCTCAACACAGAAGCTGCATTTGTCGAAGCCATTACATATGATAACCTACGGTGAATTGCTTACACTTGATCCTTTAACTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

724

Amino Acids

80.45

Weight (kDa)

6.16

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 122 - 182 9.3e-08 Leucine rich repeat
LRR_14 PF23598 205 - 292 3.1e-06 Leucine-rich repeat region
LRR_8 PF13855 219 - 278 1.3e-07 Leucine rich repeat
LRR_8 PF13855 243 - 302 2e-07 Leucine rich repeat
Pkinase PF00069 417 - 694 5.3e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 418 - 694 2e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 284
AccB1I GGYRCC 1 cut(s) 644
AccBSI CCGCTC 1 cut(s) 1260
AccI GTMKAC 2 cut(s) 772, 1278
AciI CCGC 5 cut(s) 365, 389, 981, 1260, 2048
AclWI GGATC 2 cut(s) 580, 2150
AcsI RAATTY 7 cut(s) 79, 566, 614, 670, 699, 1183, 1494
AcuI CTGAAG 2 cut(s) 294, 539
AfaI GTAC 3 cut(s) 126, 960, 1009
AfiI CCNNNNNNNGG 2 cut(s) 713, 1036
AflIII ACRYGT 1 cut(s) 1733
AjnI CCWGG 2 cut(s) 1485, 1750
Alw26I GTCTC 1 cut(s) 1695
AlwI GGATC 2 cut(s) 580, 2150
AlwNI CAGNNNCTG 1 cut(s) 2101
AoxI GGCC 3 cut(s) 46, 550, 1659
ApeKI GCWGC 2 cut(s) 141, 2101
ApoI RAATTY 7 cut(s) 79, 566, 614, 670, 699, 1183, 1494
AseI ATTAAT 1 cut(s) 582
Asp700I GAANNNNTTC 2 cut(s) 494, 508
AspS9I GGNCC 4 cut(s) 47, 551, 911, 1960
AsuC2I CCSGG 1 cut(s) 1616
AsuHPI GGTGA 5 cut(s) 778, 1048, 1555, 1604, 2150
AvaII GGWCC 2 cut(s) 911, 1960
BanI GGYRCC 1 cut(s) 644
BarI GAAGNNNNNNTAC 2 cut(s) 756, 788
BbsI GAAGAC 2 cut(s) 282, 1096
BbvI GCAGC 2 cut(s) 153, 2088
BciT130I CCWGG 2 cut(s) 1487, 1752
BcnI CCSGG 1 cut(s) 1616
BcoDI GTCTC 1 cut(s) 1695
BfaI CTAG 3 cut(s) 452, 641, 1928
BglII AGATCT 1 cut(s) 454
BisI GCNGC 3 cut(s) 142, 982, 2102
BlpI GCTNAGC 1 cut(s) 869
BlsI GCNGC 3 cut(s) 143, 983, 2103
Bme1390I CCNGG 3 cut(s) 1487, 1616, 1752
Bme18I GGWCC 2 cut(s) 911, 1960
BmgT120I GGNCC 4 cut(s) 47, 551, 911, 1960
BmiI GGNNCC 2 cut(s) 49, 646
BmrFI CCNGG 3 cut(s) 1487, 1616, 1752
BmrI ACTGGG 1 cut(s) 2037
BmsI GCATC 5 cut(s) 798, 1260, 1867, 1993, 2047
BmuI ACTGGG 1 cut(s) 2037
BpiI GAAGAC 2 cut(s) 282, 1096
Bpu10I CCTNAGC 1 cut(s) 1573
Bpu1102I GCTNAGC 1 cut(s) 869
BpuEI CTTGAG 2 cut(s) 678, 1003
BpuMI CCSGG 1 cut(s) 1616
Bsa29I ATCGAT 1 cut(s) 575
BsaJI CCNNGG 1 cut(s) 1662
BsaWI WCCGGW 1 cut(s) 1404
Bsc4I CCNNNNNNNGG 2 cut(s) 713, 1036
Bse1I ACTGG 3 cut(s) 193, 409, 2043
Bse3DI GCAATG 1 cut(s) 1392
BseBI CCWGG 2 cut(s) 1487, 1752
BseCI ATCGAT 1 cut(s) 575
BseDI CCNNGG 1 cut(s) 1662
BseGI GGATG 6 cut(s) 51, 1345, 1535, 1858, 1957, 2038
BseLI CCNNNNNNNGG 2 cut(s) 713, 1036
BseMI GCAATG 1 cut(s) 1392
BseMII CTCAG 2 cut(s) 667, 883
BseNI ACTGG 3 cut(s) 193, 409, 2043
BseRI GAGGAG 2 cut(s) 143, 2075
BseXI GCAGC 2 cut(s) 153, 2088
BsgI GTGCAG 2 cut(s) 202, 644
Bsh1285I CGRYCG 1 cut(s) 1227
BshFI GGCC 3 cut(s) 48, 552, 1661
BshNI GGYRCC 1 cut(s) 644
BshVI ATCGAT 1 cut(s) 575
BsiEI CGRYCG 1 cut(s) 1227
BsiSI CCGG 2 cut(s) 1405, 1615
BslFI GGGAC 1 cut(s) 369
BslI CCNNNNNNNGG 2 cut(s) 713, 1036
BsmAI GTCTC 1 cut(s) 1695
BsmFI GGGAC 1 cut(s) 369
BsnI GGCC 3 cut(s) 48, 552, 1661
Bsp1407I TGTACA 1 cut(s) 958
Bsp143I GATC 3 cut(s) 454, 572, 2155
Bsp1720I GCTNAGC 1 cut(s) 869
BspACI CCGC 5 cut(s) 365, 389, 981, 1260, 2048
BspANI GGCC 3 cut(s) 48, 552, 1661
BspCNI CTCAG 2 cut(s) 666, 882
BspDI ATCGAT 1 cut(s) 575
BspHI TCATGA 1 cut(s) 445
BspLI GGNNCC 2 cut(s) 49, 646
BspPI GGATC 2 cut(s) 580, 2150
BspT107I GGYRCC 1 cut(s) 644
BsrBI CCGCTC 1 cut(s) 1260
BsrDI GCAATG 1 cut(s) 1392
BsrGI TGTACA 1 cut(s) 958
BsrI ACTGG 3 cut(s) 193, 409, 2043
BssECI CCNNGG 1 cut(s) 1662
BssMI GATC 3 cut(s) 454, 572, 2155
BssNAI GTATAC 1 cut(s) 773
BssT1I CCWWGG 1 cut(s) 1662
Bst1107I GTATAC 1 cut(s) 773
Bst2UI CCWGG 2 cut(s) 1487, 1752
Bst4CI ACNGT 2 cut(s) 1559, 2138
Bst6I CTCTTC 2 cut(s) 921, 1882
BstAUI TGTACA 1 cut(s) 958
BstC8I GCNNGC 4 cut(s) 365, 866, 1729, 2036
BstDEI CTNAG 5 cut(s) 472, 653, 869, 1573, 1686
BstF5I GGATG 6 cut(s) 51, 1345, 1535, 1858, 1957, 2038
BstKTI GATC 3 cut(s) 457, 575, 2158
BstMAI GTCTC 1 cut(s) 1695
BstMBI GATC 3 cut(s) 454, 572, 2155
BstMCI CGRYCG 1 cut(s) 1227
BstMWI GCNNNNNNNGC 4 cut(s) 870, 1257, 1928, 1981
BstNI CCWGG 2 cut(s) 1487, 1752
BstNSI RCATGY 2 cut(s) 868, 1737
BstSCI CCNGG 3 cut(s) 1485, 1614, 1750
BstV1I GCAGC 2 cut(s) 153, 2088
BstV2I GAAGAC 2 cut(s) 282, 1096
BstX2I RGATCY 1 cut(s) 454
BstXI CCANNNNNNTGG 4 cut(s) 44, 116, 188, 1309
BstYI RGATCY 1 cut(s) 454
BstZ17I GTATAC 1 cut(s) 773
Bsu15I ATCGAT 1 cut(s) 575
BsuRI GGCC 3 cut(s) 48, 552, 1661
BsuTUI ATCGAT 1 cut(s) 575
BtgZI GCGATG 1 cut(s) 1824
BtsCI GGATG 6 cut(s) 51, 1345, 1535, 1858, 1957, 2038
BtsI GCAGTG 2 cut(s) 151, 1680
BtsIMutI CAGTG 2 cut(s) 151, 1680
Cac8I GCNNGC 4 cut(s) 365, 866, 1729, 2036
CaiI CAGNNNCTG 1 cut(s) 2101
CciI TCATGA 1 cut(s) 445
Cfr13I GGNCC 4 cut(s) 47, 551, 911, 1960
ClaI ATCGAT 1 cut(s) 575
CsiI ACCWGGT 1 cut(s) 1750
Csp6I GTAC 3 cut(s) 125, 959, 1008
CspCI CAANNNNNGTGG 2 cut(s) 693, 728
CviAII CATG 8 cut(s) 101, 446, 865, 1013, 1157, 1734, 2031, 2169
CviQI GTAC 3 cut(s) 125, 959, 1008
DdeI CTNAG 5 cut(s) 472, 653, 869, 1573, 1686
DpnI GATC 3 cut(s) 456, 574, 2157
DpnII GATC 3 cut(s) 454, 572, 2155
DrdI GACNNNNNNGTC 1 cut(s) 284
DseDI GACNNNNNNGTC 1 cut(s) 284
Eam1104I CTCTTC 2 cut(s) 921, 1882
EarI CTCTTC 2 cut(s) 921, 1882
Eco130I CCWWGG 1 cut(s) 1662
Eco147I AGGCCT 1 cut(s) 1661
Eco47I GGWCC 2 cut(s) 911, 1960
Eco57I CTGAAG 2 cut(s) 294, 539
EcoO109I RGGNCCY 2 cut(s) 551, 911
EcoRI GAATTC 1 cut(s) 699
EcoRII CCWGG 2 cut(s) 1485, 1750
EcoT14I CCWWGG 1 cut(s) 1662
EcoT22I ATGCAT 1 cut(s) 1158
ErhI CCWWGG 1 cut(s) 1662
FaeI CATG 8 cut(s) 104, 449, 868, 1016, 1160, 1737, 2034, 2172
FalI AAGNNNNNCTT 2 cut(s) 900, 932
FaqI GGGAC 1 cut(s) 369
FatI CATG 8 cut(s) 100, 445, 864, 1012, 1156, 1733, 2030, 2168
FauI CCCGC 2 cut(s) 372, 382
FauNDI CATATG 1 cut(s) 2124
FblI GTMKAC 2 cut(s) 772, 1278
Fnu4HI GCNGC 3 cut(s) 142, 982, 2102
FokI GGATG 6 cut(s) 38, 1352, 1542, 1845, 1964, 2025
Fsp4HI GCNGC 3 cut(s) 142, 982, 2102
FspBI CTAG 3 cut(s) 452, 641, 1928
GluI GCNGC 3 cut(s) 142, 982, 2102
HaeIII GGCC 3 cut(s) 48, 552, 1661
HapII CCGG 2 cut(s) 1405, 1615
Hin1II CATG 8 cut(s) 104, 449, 868, 1016, 1160, 1737, 2034, 2172
HincII GTYRAC 4 cut(s) 258, 525, 886, 1555
HindII GTYRAC 4 cut(s) 258, 525, 886, 1555
HindIII AAGCTT 3 cut(s) 205, 223, 2073
HinfI GANTC 8 cut(s) 14, 150, 484, 495, 1238, 1365, 1696, 1703
HpaI GTTAAC 1 cut(s) 1555
HpaII CCGG 2 cut(s) 1405, 1615
HphI GGTGA 5 cut(s) 778, 1048, 1555, 1604, 2150
Hpy166II GTNNAC 9 cut(s) 34, 149, 258, 525, 773, 886, 1279, 1555, 1612
Hpy188I TCNGA 8 cut(s) 233, 274, 489, 565, 656, 669, 1672, 1695
Hpy8I GTNNAC 9 cut(s) 34, 149, 258, 525, 773, 886, 1279, 1555, 1612
Hpy99I CGWCG 1 cut(s) 1595
HpyAV CCTTC 6 cut(s) 484, 758, 854, 902, 1070, 1088
HpyCH4III ACNGT 2 cut(s) 1559, 2138
HpyCH4IV ACGT 2 cut(s) 527, 1593
HpyF10VI GCNNNNNNNGC 4 cut(s) 870, 1257, 1928, 1981
HpyF3I CTNAG 5 cut(s) 472, 653, 869, 1573, 1686
HpySE526I ACGT 2 cut(s) 527, 1593
Hsp92II CATG 8 cut(s) 104, 449, 868, 1016, 1160, 1737, 2034, 2172
KspAI GTTAAC 1 cut(s) 1555
Kzo9I GATC 3 cut(s) 454, 572, 2155
LmnI GCTCC 2 cut(s) 949, 1257
Lsp1109I GCAGC 2 cut(s) 153, 2088
LweI GCATC 5 cut(s) 798, 1260, 1867, 1993, 2047
MabI ACCWGGT 1 cut(s) 1750
MaeI CTAG 3 cut(s) 452, 641, 1928
MaeII ACGT 2 cut(s) 527, 1593
MaeIII GTNAC 3 cut(s) 407, 749, 1923
MalI GATC 3 cut(s) 456, 574, 2157
MbiI CCGCTC 1 cut(s) 1260
MboI GATC 3 cut(s) 454, 572, 2155
MfeI CAATTG 3 cut(s) 1098, 1605, 1944
MflI RGATCY 1 cut(s) 454
MlyI GAGTC 2 cut(s) 144, 1697
MmeI TCCRAC 2 cut(s) 2003, 2084
Mph1103I ATGCAT 1 cut(s) 1158
MroXI GAANNNNTTC 2 cut(s) 494, 508
MseI TTAA 6 cut(s) 74, 582, 674, 746, 1554, 2162
MslI CAYNNNNRTG 2 cut(s) 791, 1307
MspI CCGG 2 cut(s) 1405, 1615
MspR9I CCNGG 3 cut(s) 1487, 1616, 1752
MunI CAATTG 3 cut(s) 1098, 1605, 1944
MvaI CCWGG 2 cut(s) 1487, 1752
MwoI GCNNNNNNNGC 4 cut(s) 870, 1257, 1928, 1981
NciI CCSGG 1 cut(s) 1616
NdeI CATATG 1 cut(s) 2124
NdeII GATC 3 cut(s) 454, 572, 2155
NlaIII CATG 8 cut(s) 104, 449, 868, 1016, 1160, 1737, 2034, 2172
NlaIV GGNNCC 2 cut(s) 49, 646
NsiI ATGCAT 1 cut(s) 1158
NspI RCATGY 2 cut(s) 868, 1737
PaeI GCATGC 1 cut(s) 868
PagI TCATGA 1 cut(s) 445
PceI AGGCCT 1 cut(s) 1661
PciI ACATGT 1 cut(s) 1733
PdmI GAANNNNTTC 2 cut(s) 494, 508
PfeI GAWTC 6 cut(s) 14, 484, 495, 1238, 1365, 1696
PkrI GCNGC 3 cut(s) 143, 983, 2103
PleI GAGTC 2 cut(s) 144, 1697
PpsI GAGTC 2 cut(s) 144, 1697
PpuMI RGGWCCY 1 cut(s) 911
PscI ACATGT 1 cut(s) 1733
PshBI ATTAAT 1 cut(s) 582
Psp5II RGGWCCY 1 cut(s) 911
Psp6I CCWGG 2 cut(s) 1485, 1750
PspGI CCWGG 2 cut(s) 1485, 1750
PspN4I GGNNCC 2 cut(s) 49, 646
PspPI GGNCC 4 cut(s) 47, 551, 911, 1960
PspPPI RGGWCCY 1 cut(s) 911
PstNI CAGNNNCTG 1 cut(s) 2101
PsuI RGATCY 1 cut(s) 454
RsaI GTAC 3 cut(s) 126, 960, 1009
RsaNI GTAC 3 cut(s) 125, 959, 1008
RseI CAYNNNNRTG 2 cut(s) 791, 1307
SaqAI TTAA 6 cut(s) 74, 582, 674, 746, 1554, 2162
SatI GCNGC 3 cut(s) 142, 982, 2102
Sau3AI GATC 3 cut(s) 454, 572, 2155
Sau96I GGNCC 4 cut(s) 47, 551, 911, 1960
SchI GAGTC 2 cut(s) 144, 1697
ScrFI CCNGG 3 cut(s) 1487, 1616, 1752
SexAI ACCWGGT 1 cut(s) 1750
SfaNI GCATC 5 cut(s) 798, 1260, 1867, 1993, 2047
SinI GGWCC 2 cut(s) 911, 1960
SmiMI CAYNNNNRTG 2 cut(s) 791, 1307
SmlI CTYRAG 2 cut(s) 693, 1018
SmoI CTYRAG 2 cut(s) 693, 1018
SphI GCATGC 1 cut(s) 868
SseBI AGGCCT 1 cut(s) 1661
SsiI CCGC 5 cut(s) 365, 389, 981, 1260, 2048
SspI AATATT 4 cut(s) 96, 136, 988, 1549
SspMI CTAG 3 cut(s) 452, 641, 1928
StuI AGGCCT 1 cut(s) 1661
StyD4I CCNGG 3 cut(s) 1485, 1614, 1750
StyI CCWWGG 1 cut(s) 1662
TaaI ACNGT 2 cut(s) 1559, 2138
TaiI ACGT 2 cut(s) 530, 1596
TaqI TCGA 4 cut(s) 575, 858, 1699, 2111
TaqII GACCGA 1 cut(s) 1241
TatI WGTACW 1 cut(s) 958
TauI GCSGC 1 cut(s) 984
TfiI GAWTC 6 cut(s) 14, 484, 495, 1238, 1365, 1696
Tru1I TTAA 6 cut(s) 74, 582, 674, 746, 1554, 2162
Tru9I TTAA 6 cut(s) 74, 582, 674, 746, 1554, 2162
TscAI CASTG 2 cut(s) 151, 1687
TseI GCWGC 2 cut(s) 141, 2101
TspDTI ATGAA 9 cut(s) 434, 832, 915, 1173, 1389, 1524, 1890, 2019, 2081
TspRI CASTG 2 cut(s) 151, 1687
VpaK11BI GGWCC 2 cut(s) 911, 1960
VspI ATTAAT 1 cut(s) 582
XapI RAATTY 7 cut(s) 79, 566, 614, 670, 699, 1183, 1494
XceI RCATGY 2 cut(s) 868, 1737
XmiI GTMKAC 2 cut(s) 772, 1278
XmnI GAANNNNTTC 2 cut(s) 494, 508
XspI CTAG 3 cut(s) 452, 641, 1928
Zsp2I ATGCAT 1 cut(s) 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.