Rmu_sc0003500.1_g000046

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003500.1
Physical Location & Seq
Forward (+)
175302 .. 178656
3355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003500.1_g000046.1.cds

Sequence Viewer

Length: 3003 bp
atgagagcttcaagtttctatgattgttttagctctctagtttgccttaccttgtgccttgagcagcttcagttgtttgcatttgcttctgcttctatcaattccaattctgaagcagaggctcttctcacatggagagacagcgttcaaaaccaaacaaagaataatctcacctcatcctggacctataatcccagtactagtaatgccaccaactcttccggaaagccagaagcaaatgcaagcccttgccattggagtggtatttcatgcaacaaagctggaagcgtgagcaacataagcctttctgattttggtttacaaggtacattacatgaattttcgttctccaccttccctaatctcgaatatctggacctcagcttcaatgaactcttccatgtcatcccaccccagatcagttccctcatcaaacttgtgtctcttgatctaaccaataatcagttgtccgggagaatcccaccagaaatcactcttctaagaaatctaacctttcttagtctcgaaggcaataatctttttgatattattcctaaagagataggaaacctgaaatctctcatggagctatcattgagctataatcgactcactggttcaattccaacatcactagaaataggatatttgaagtctttagaagatctaaactgtggcaccaataatcttagtggttcgatcccaacatcactaggtaacctaacaaaccttaaatggctttatctcggtgtaaacaatctatctggagcaattcctacggagattgggaaattgaaatctatgttgggtatagattttggcatcaatcaactgaatggttcaattcccacttcatttggtgacctgacaaaccttacaaatctctaccttcgtgataaccaactttccggctccatcccccaagagatggagaaacttaagaagctggttgtactgcatttggatactaaccaattttctggttatttgccccaatatattggccaaggtggatcgctcacaaacttttcagcttcagacaactatttgattggtccaattcccaaaagcttgaaaactagcacaaagttattcagagtccgactcaatggaaaccaattgacaagcaatctttcagaagactttggagtctatccaaatcttcgatttctagacctgagcgacaataacctgtatggtgaaatctcaagcaactggggacagtgcccacaattgacaaccttactacttgcgggaaacaacttaactggcagtatatcacctgagattggaaatgcaagccaaattcatgagctcgatctttcttctaatggtttagatgggatgattccagaagaatttggaagattgacttctttggtgaagctgaagttagatggcaatcaactttcaggtagtgtaccatcagaatttggatcattgactgatcttgaatatcttgatctatcaagaaacacattgaactcgtcaattccaagcgttctgggtgatttgctcaaactacactacttgaatttgagcaacaataagtttggacaaagaattcctgttcacttggggaagttagctcacctgtcccaactagatttgagtcaaaactcaatcgagggggagataccatcagaagtcagcaatatggagagtttggagatgttgaatttgtcacacaataatctttctggttccattccaacaagttttggaaatatgcgtggcttgtcgtatgttgacatatcttacaatgagttggaaggtccacttcccaacagcaaagcatttcaagatgctcccccagaagcattacaaggaaacaagggattgtgtggcaacgttgaagatttggaaccctgcaatgaagatagttcaaaaaaggtccatggccagaaactggtatatgtgatctcattctctcttctggcaacacttttacttctatcttcctgcttcataattgtctttgtagtatttagaaaaaagaagcatcgggatgacgaaagaaacaatagacatgaggagatttctttttcaacgctcaactttgatggcaaggcgatgtatgaggaaatcataaaggcaacagaggattttgattccacatattgcattgggcagggaggacagggaagagtctataagatgaatttgtcatctgccaatatagtggccgtgaagaaactccatcagttatgcaatgacgatgaaaaacttcagaaggaattcttaaatgaagtacgtgcactgactgagatacgacaccgaaacattgtgaagctttatggcttctgttcacataggcaacactcattcttggtgtatgagtatctagaaaggggtagcttggcaacagtgttgagcaatgacgatgaagctaaagaacttgggtggaatcaaagggtgaaaattgtcaaaggtgtagctcatgccttatgttacatgcaccacaattgtttggaaccaattgttcatcgggacatatcaagcaagaacattttactgaatgccgataatgaagcctgtgtttcagattttggcactgctaagttcttaaacccagactcaactaattggactgccctggcaggcacctatggatacattgcaccagagcttgcttatacaatggaagtgaacgagaaatgtgatgtttacagcttcggtgtggtaacattggaaacaattatgggaaggcatccaggagatcttctcgtacctttagcatctgggtcatcttcaccgtcatctgcattacccgcccatcaaatgttaattgtggatgcttttgacaaacgcattacccctcctacagatgaatttgcaggtgaactgctctctcttgtgaagatagcattttcatgcttgaataccagtcctcagtctcgaccaaaaatggaacaagtttctcaacaactggaaactcagaggctgtatttgtcaaagccattacagatgataagatgtggtgaattgctgactctcaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1000

Amino Acids

110.28

Weight (kDa)

5.37

Isoelectric Point (pI)

30.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2828
AasI GACNNNNNNGTC 1 cut(s) 1148
Acc36I ACCTGC 1 cut(s) 2828
AccB1I GGYRCC 2 cut(s) 677, 2603
AccB7I CCANNNNNTGG 2 cut(s) 928, 1909
AccIII TCCGGA 1 cut(s) 221
AciI CCGC 2 cut(s) 1253, 2772
AclI AACGTT 1 cut(s) 1851
AclWI GGATC 3 cut(s) 694, 1021, 1444
AcoI YGGCCR 3 cut(s) 1003, 1900, 2184
AcuI CTGAAG 5 cut(s) 53, 132, 1020, 1409, 2213
AfaI GTAC 6 cut(s) 199, 328, 954, 1422, 2253, 2730
AfiI CCNNNNNNNGG 4 cut(s) 180, 928, 1289, 1909
AflII CTTAAG 1 cut(s) 938
AhlI ACTAGT 1 cut(s) 200
AjnI CCWGG 3 cut(s) 179, 2595, 2713
AjuI GAANNNNNNNTTGG 2 cut(s) 788, 820
Alw21I GWGCWC 2 cut(s) 1317, 2260
Alw26I GTCTC 4 cut(s) 132, 447, 527, 2901
Alw44I GTGCAC 1 cut(s) 2256
AlwI GGATC 3 cut(s) 694, 1021, 1444
AlwNI CAGNNNCTG 2 cut(s) 1909, 2944
Aor13HI TCCGGA 1 cut(s) 221
AoxI GGCC 3 cut(s) 1003, 1900, 2184
ApaLI GTGCAC 1 cut(s) 2256
ApeKI GCWGC 1 cut(s) 64
Asp700I GAANNNNTTC 2 cut(s) 2226, 2237
AspS9I GGNCC 5 cut(s) 183, 376, 1055, 1775, 1894
AsuC2I CCSGG 1 cut(s) 472
AvaII GGWCC 5 cut(s) 183, 376, 1055, 1775, 1894
BaeGI GKGCMC 2 cut(s) 1229, 2260
BalI TGGCCA 2 cut(s) 1005, 1902
BanI GGYRCC 2 cut(s) 677, 2603
BanII GRGCYC 1 cut(s) 1317
BbsI GAAGAC 1 cut(s) 1146
Bbv12I GWGCWC 2 cut(s) 1317, 2260
BbvCI CCTCAGC 1 cut(s) 380
BbvI GCAGC 1 cut(s) 76
BccI CCATC 9 cut(s) 922, 923, 1334, 1391, 1432, 1648, 2057, 2208, 2784
BceAI ACGGC 1 cut(s) 2171
BciT130I CCWGG 3 cut(s) 181, 2597, 2715
BciVI GTATCC 2 cut(s) 958, 2606
BcnI CCSGG 1 cut(s) 472
BcoDI GTCTC 4 cut(s) 132, 447, 527, 2901
BcuI ACTAGT 1 cut(s) 200
BfaI CTAG 8 cut(s) 38, 201, 635, 713, 1080, 1172, 1604, 2345
BfmI CTRYAG 1 cut(s) 2823
BfrI CTTAAG 1 cut(s) 938
BfuAI ACCTGC 1 cut(s) 2828
BfuI GTATCC 2 cut(s) 958, 2606
BglII AGATCT 2 cut(s) 664, 2719
BisI GCNGC 1 cut(s) 65
BlsI GCNGC 1 cut(s) 66
BmcAI AGTACT 1 cut(s) 199
Bme1390I CCNGG 4 cut(s) 181, 472, 2597, 2715
Bme18I GGWCC 5 cut(s) 183, 376, 1055, 1775, 1894
BmgT120I GGNCC 5 cut(s) 183, 376, 1055, 1775, 1894
BmiI GGNNCC 6 cut(s) 679, 913, 1705, 1866, 2475, 2605
BmrFI CCNGG 4 cut(s) 181, 472, 2597, 2715
BmrI ACTGGG 2 cut(s) 189, 1225
BmsI GCATC 6 cut(s) 831, 1795, 2011, 2719, 2747, 2785
BmuI ACTGGG 2 cut(s) 189, 1225
BpiI GAAGAC 1 cut(s) 1146
BplI GAGNNNNNCTC 4 cut(s) 1089, 1121, 2709, 2741
BpmI CTGGAG 1 cut(s) 786
Bpu10I CCTNAGC 2 cut(s) 380, 1178
BpuEI CTTGAG 2 cut(s) 80, 1192
BpuMI CCSGG 1 cut(s) 472
BsaAI YACGTR 1 cut(s) 2255
BsaBI GATNNNNATC 1 cut(s) 1401
BsaJI CCNNGG 3 cut(s) 1006, 1897, 2595
BsaWI WCCGGW 1 cut(s) 221
Bsc4I CCNNNNNNNGG 4 cut(s) 180, 928, 1289, 1909
Bse1I ACTGG 7 cut(s) 195, 619, 1220, 1273, 1914, 2886, 2934
Bse3DI GCAATG 4 cut(s) 1879, 2218, 2383, 2616
Bse8I GATNNNNATC 1 cut(s) 1401
BseAI TCCGGA 1 cut(s) 221
BseBI CCWGG 3 cut(s) 181, 2597, 2715
BseDI CCNNGG 3 cut(s) 1006, 1897, 2595
BseGI GGATG 7 cut(s) 176, 405, 915, 1350, 2014, 2710, 2800
BseJI GATNNNNATC 1 cut(s) 1401
BseLI CCNNNNNNNGG 4 cut(s) 180, 928, 1289, 1909
BseMI GCAATG 4 cut(s) 1879, 2218, 2383, 2616
BseMII CTCAG 6 cut(s) 394, 1169, 1275, 2256, 2906, 2951
BseNI ACTGG 7 cut(s) 195, 619, 1220, 1273, 1914, 2886, 2934
BseRI GAGGAG 1 cut(s) 2048
BseSI GKGCMC 2 cut(s) 1229, 2260
BseXI GCAGC 1 cut(s) 76
BshFI GGCC 3 cut(s) 1005, 1902, 2186
BshNI GGYRCC 2 cut(s) 677, 2603
BsiHKAI GWGCWC 2 cut(s) 1317, 2260
BsiSI CCGG 3 cut(s) 222, 471, 909
BslFI GGGAC 3 cut(s) 1233, 1582, 2504
BslI CCNNNNNNNGG 4 cut(s) 180, 928, 1289, 1909
BsmAI GTCTC 4 cut(s) 132, 447, 527, 2901
BsmFI GGGAC 3 cut(s) 1233, 1582, 2504
BsmI GAATGC 1 cut(s) 2524
BsnI GGCC 3 cut(s) 1005, 1902, 2186
Bsp1286I GDGCHC 3 cut(s) 1229, 1317, 2260
Bsp13I TCCGGA 1 cut(s) 221
Bsp19I CCATGG 1 cut(s) 1897
BspACI CCGC 2 cut(s) 1253, 2772
BspANI GGCC 3 cut(s) 1005, 1902, 2186
BspCNI CTCAG 6 cut(s) 393, 1170, 1276, 2257, 2905, 2950
BspEI TCCGGA 1 cut(s) 221
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 6 cut(s) 679, 913, 1705, 1866, 2475, 2605
BspMI ACCTGC 1 cut(s) 2828
BspPI GGATC 3 cut(s) 694, 1021, 1444
BspQI GCTCTTC 1 cut(s) 129
BspT107I GGYRCC 2 cut(s) 677, 2603
BspTI CTTAAG 1 cut(s) 938
BsrDI GCAATG 4 cut(s) 1879, 2218, 2383, 2616
BsrI ACTGG 7 cut(s) 195, 619, 1220, 1273, 1914, 2886, 2934
BssECI CCNNGG 3 cut(s) 1006, 1897, 2595
BssT1I CCWWGG 2 cut(s) 1006, 1897
Bst2UI CCWGG 3 cut(s) 181, 2597, 2715
Bst4CI ACNGT 4 cut(s) 674, 1224, 2368, 2757
Bst6I CTCTTC 6 cut(s) 129, 223, 401, 501, 1938, 2140
BstAFI CTTAAG 1 cut(s) 938
BstBAI YACGTR 1 cut(s) 2255
BstC8I GCNNGC 4 cut(s) 244, 1300, 2602, 2631
BstDSI CCRYGG 1 cut(s) 1897
BstEII GGTNACC 2 cut(s) 716, 860
BstF5I GGATG 7 cut(s) 176, 405, 915, 1350, 2014, 2710, 2800
BstMAI GTCTC 4 cut(s) 132, 447, 527, 2901
BstMWI GCNNNNNNNGC 2 cut(s) 300, 2771
BstNI CCWGG 3 cut(s) 181, 2597, 2715
BstNSI RCATGY 1 cut(s) 2458
BstPI GGTNACC 2 cut(s) 716, 860
BstSCI CCNGG 4 cut(s) 179, 470, 2595, 2713
BstSFI CTRYAG 1 cut(s) 2823
BstSLI GKGCMC 2 cut(s) 1229, 2260
BstV1I GCAGC 1 cut(s) 76
BstV2I GAAGAC 1 cut(s) 1146
BstX2I RGATCY 2 cut(s) 664, 2719
BstXI CCANNNNNNTGG 4 cut(s) 260, 980, 1001, 2182
BstYI RGATCY 2 cut(s) 664, 2719
BsuI GTATCC 2 cut(s) 958, 2606
BsuRI GGCC 3 cut(s) 1005, 1902, 2186
BtgI CCRYGG 1 cut(s) 1897
BtgZI GCGATG 1 cut(s) 2087
BtsCI GGATG 7 cut(s) 176, 405, 915, 1350, 2014, 2710, 2800
BtsI GCAGTG 1 cut(s) 2553
BtsIMutI CAGTG 5 cut(s) 612, 1229, 2258, 2373, 2553
BveI ACCTGC 1 cut(s) 2828
Cac8I GCNNGC 4 cut(s) 244, 1300, 2602, 2631
CaiI CAGNNNCTG 2 cut(s) 1909, 2944
CciI TCATGA 1 cut(s) 1309
Cfr13I GGNCC 5 cut(s) 183, 376, 1055, 1775, 1894
Csp6I GTAC 6 cut(s) 198, 327, 953, 1421, 2252, 2729
CspCI CAANNNNNGTGG 2 cut(s) 838, 873
CviQI GTAC 6 cut(s) 198, 327, 953, 1421, 2252, 2729
DrdI GACNNNNNNGTC 1 cut(s) 1148
DseDI GACNNNNNNGTC 1 cut(s) 1148
EaeI YGGCCR 3 cut(s) 1003, 1900, 2184
Eam1104I CTCTTC 6 cut(s) 129, 223, 401, 501, 1938, 2140
EarI CTCTTC 6 cut(s) 129, 223, 401, 501, 1938, 2140
Ecl136II GAGCTC 1 cut(s) 1315
Eco130I CCWWGG 2 cut(s) 1006, 1897
Eco24I GRGCYC 1 cut(s) 1317
Eco47I GGWCC 5 cut(s) 183, 376, 1055, 1775, 1894
Eco53kI GAGCTC 1 cut(s) 1315
Eco57I CTGAAG 5 cut(s) 53, 132, 1020, 1409, 2213
Eco91I GGTNACC 2 cut(s) 716, 860
EcoICRI GAGCTC 1 cut(s) 1315
EcoO65I GGTNACC 2 cut(s) 716, 860
EcoRI GAATTC 2 cut(s) 1563, 2237
EcoRII CCWGG 3 cut(s) 179, 2595, 2713
EcoT14I CCWWGG 2 cut(s) 1006, 1897
EcoT38I GRGCYC 1 cut(s) 1317
ErhI CCWWGG 2 cut(s) 1006, 1897
FalI AAGNNNNNCTT 6 cut(s) 1357, 1389, 1764, 1796, 2225, 2257
FaqI GGGAC 3 cut(s) 1233, 1582, 2504
FauI CCCGC 2 cut(s) 1246, 2779
Fnu4HI GCNGC 1 cut(s) 65
FokI GGATG 7 cut(s) 163, 392, 902, 1357, 2021, 2697, 2807
FriOI GRGCYC 1 cut(s) 1317
Fsp4HI GCNGC 1 cut(s) 65
FspBI CTAG 8 cut(s) 38, 201, 635, 713, 1080, 1172, 1604, 2345
GluI GCNGC 1 cut(s) 65
GsuI CTGGAG 1 cut(s) 786
HaeIII GGCC 3 cut(s) 1005, 1902, 2186
HapII CCGG 3 cut(s) 222, 471, 909
HincII GTYRAC 1 cut(s) 1750
HindII GTYRAC 1 cut(s) 1750
HindIII AAGCTT 2 cut(s) 1069, 2291
HpaII CCGG 3 cut(s) 222, 471, 909
HpyAV CCTTC 6 cut(s) 364, 521, 899, 1766, 2227, 2700
HpyCH4III ACNGT 4 cut(s) 674, 1224, 2368, 2757
HpyCH4IV ACGT 2 cut(s) 1851, 2254
HpyF10VI GCNNNNNNNGC 2 cut(s) 300, 2771
HpySE526I ACGT 2 cut(s) 1851, 2254
Kpn2I TCCGGA 1 cut(s) 221
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 4 cut(s) 586, 767, 917, 1813
Lsp1109I GCAGC 1 cut(s) 76
LweI GCATC 6 cut(s) 831, 1795, 2011, 2719, 2747, 2785
MaeI CTAG 8 cut(s) 38, 201, 635, 713, 1080, 1172, 1604, 2345
MaeII ACGT 2 cut(s) 1851, 2254
MaeIII GTNAC 5 cut(s) 716, 860, 1683, 2450, 2683
MfeI CAATTG 4 cut(s) 1118, 1232, 2464, 2478
MflI RGATCY 2 cut(s) 664, 2719
MhlI GDGCHC 3 cut(s) 1229, 1317, 2260
MlsI TGGCCA 2 cut(s) 1005, 1902
MluNI TGGCCA 2 cut(s) 1005, 1902
MlyI GAGTC 8 cut(s) 603, 1098, 1107, 1158, 1621, 2157, 2570, 2986
MmeI TCCRAC 4 cut(s) 650, 1126, 1736, 1749
Mox20I TGGCCA 2 cut(s) 1005, 1902
MroI TCCGGA 1 cut(s) 221
MroXI GAANNNNTTC 2 cut(s) 2226, 2237
MscI TGGCCA 2 cut(s) 1005, 1902
MseI TTAA 6 cut(s) 732, 939, 1265, 2243, 2567, 2786
MslI CAYNNNNRTG 3 cut(s) 258, 2007, 2872
Msp20I TGGCCA 2 cut(s) 1005, 1902
MspCI CTTAAG 1 cut(s) 938
MspI CCGG 3 cut(s) 222, 471, 909
MspR9I CCNGG 4 cut(s) 181, 472, 2597, 2715
MunI CAATTG 4 cut(s) 1118, 1232, 2464, 2478
Mva1269I GAATGC 1 cut(s) 2524
MvaI CCWGG 3 cut(s) 181, 2597, 2715
MwoI GCNNNNNNNGC 2 cut(s) 300, 2771
NciI CCSGG 1 cut(s) 472
NcoI CCATGG 1 cut(s) 1897
NlaIV GGNNCC 6 cut(s) 679, 913, 1705, 1866, 2475, 2605
NmuCI GTSAC 2 cut(s) 860, 1683
NspI RCATGY 1 cut(s) 2458
PagI TCATGA 1 cut(s) 1309
PaqCI CACCTGC 1 cut(s) 2828
PciSI GCTCTTC 1 cut(s) 129
PctI GAATGC 1 cut(s) 2524
PdmI GAANNNNTTC 2 cut(s) 2226, 2237
PfeI GAWTC 4 cut(s) 477, 1348, 2111, 2407
PflMI CCANNNNNTGG 2 cut(s) 928, 1909
PfoI TCCNGGA 3 cut(s) 179, 470, 2713
PkrI GCNGC 1 cut(s) 66
PleI GAGTC 8 cut(s) 603, 1098, 1106, 1157, 1620, 2156, 2570, 2986
PpsI GAGTC 8 cut(s) 603, 1098, 1106, 1157, 1620, 2156, 2570, 2986
Ppu21I YACGTR 1 cut(s) 2255
Psp124BI GAGCTC 1 cut(s) 1317
Psp1406I AACGTT 1 cut(s) 1851
Psp6I CCWGG 3 cut(s) 179, 2595, 2713
PspEI GGTNACC 2 cut(s) 716, 860
PspGI CCWGG 3 cut(s) 179, 2595, 2713
PspN4I GGNNCC 6 cut(s) 679, 913, 1705, 1866, 2475, 2605
PspPI GGNCC 5 cut(s) 183, 376, 1055, 1775, 1894
PstNI CAGNNNCTG 2 cut(s) 1909, 2944
PsuI RGATCY 2 cut(s) 664, 2719
RsaI GTAC 6 cut(s) 199, 328, 954, 1422, 2253, 2730
RsaNI GTAC 6 cut(s) 198, 327, 953, 1421, 2252, 2729
RseI CAYNNNNRTG 3 cut(s) 258, 2007, 2872
SacI GAGCTC 1 cut(s) 1317
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 6 cut(s) 732, 939, 1265, 2243, 2567, 2786
SatI GCNGC 1 cut(s) 65
Sau96I GGNCC 5 cut(s) 183, 376, 1055, 1775, 1894
ScaI AGTACT 1 cut(s) 199
SchI GAGTC 8 cut(s) 603, 1098, 1107, 1158, 1621, 2157, 2570, 2986
ScrFI CCNGG 4 cut(s) 181, 472, 2597, 2715
SduI GDGCHC 3 cut(s) 1229, 1317, 2260
SfaNI GCATC 6 cut(s) 831, 1795, 2011, 2719, 2747, 2785
SfcI CTRYAG 1 cut(s) 2823
SinI GGWCC 5 cut(s) 183, 376, 1055, 1775, 1894
SmiMI CAYNNNNRTG 3 cut(s) 258, 2007, 2872
SmlI CTYRAG 3 cut(s) 59, 938, 1207
SmoI CTYRAG 3 cut(s) 59, 938, 1207
SpeI ACTAGT 1 cut(s) 200
SsiI CCGC 2 cut(s) 1253, 2772
SspMI CTAG 8 cut(s) 38, 201, 635, 713, 1080, 1172, 1604, 2345
SstI GAGCTC 1 cut(s) 1317
StyD4I CCNGG 4 cut(s) 179, 470, 2595, 2713
StyI CCWWGG 2 cut(s) 1006, 1897
TaaI ACNGT 4 cut(s) 674, 1224, 2368, 2757
TaiI ACGT 2 cut(s) 1854, 2257
TaqI TCGA 8 cut(s) 366, 525, 607, 698, 1165, 1317, 1626, 2899
TatI WGTACW 2 cut(s) 197, 952
TfiI GAWTC 4 cut(s) 477, 1348, 2111, 2407
Tru1I TTAA 6 cut(s) 732, 939, 1265, 2243, 2567, 2786
Tru9I TTAA 6 cut(s) 732, 939, 1265, 2243, 2567, 2786
TscAI CASTG 5 cut(s) 619, 1229, 2265, 2373, 2560
TseFI GTSAC 2 cut(s) 860, 1683
TseI GCWGC 1 cut(s) 64
Tsp45I GTSAC 2 cut(s) 860, 1683
TspGWI ACGGA 1 cut(s) 794
TspRI CASTG 5 cut(s) 619, 1229, 2265, 2373, 2560
Van91I CCANNNNNTGG 2 cut(s) 928, 1909
Vha464I CTTAAG 1 cut(s) 938
VneI GTGCAC 1 cut(s) 2256
VpaK11BI GGWCC 5 cut(s) 183, 376, 1055, 1775, 1894
XbaI TCTAGA 2 cut(s) 1171, 2344
XceI RCATGY 1 cut(s) 2458
XmnI GAANNNNTTC 2 cut(s) 2226, 2237
XspI CTAG 8 cut(s) 38, 201, 635, 713, 1080, 1172, 1604, 2345
ZrmI AGTACT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.