RLG00000012520

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
19502424 .. 19506444
4021 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012520

Sequence Viewer

Length: 3603 bp
ATGCAGCTTTATTGGATCGAGCACAACATCATGAAAGCAGCTCAGGAAACTACTCCGCGTCTCCTCCTCCTTCATATTTTCTTGCTCTTTTTGCTTCCACTGGAGGCCACATCATCACAAAGAATACAAGCTGAAGCTCTCCTAAAATGGAAGAACAGCTTTACTTCTTCACCACCTTCTCTGAATTCATGGTCGCTCACAAACCTAAACAACCTCTGCAACTGGACTGCCATTGTCTGCAACCGCAAAACCAAAACAGTTTCTGAAATTCACCTTGCAAACTTCAACATCACTGCAGCACTAACGCAGTTCAACTTCGACGAGTTTCTCAATCTCACCCATTTCAACCTCTATGGCAACAATTTCTCAGGGCCTATACCATCTGCCATTGGCAACCTCACCAAGCTCACAACTTTGGATTTGGGCAACAATCATTTTGCACAGGAAGTTCCTGTGGAGATGGGCAATCTCAAAAAGGTACAATATTTGCTTCTTGGAAGTAACTACTTAGAGCCTGCTGATTGGTCTAAATTTTCAGGCTTTCCTCTGTTGACATTCCTTGATCTTTCTATCAACAAAATAGACTCAAAATTTCCAGAATTTATATCTGAATGTAGGAACTTGACATTCCTAGATTTGTCTCAAAATGCTTTGACTGGCCAAATACCAGAAGTGGTATTTACCAATCTGGTCAAGCTTGAATATCTCAATCTCACCAATAACCAATTCCAAGGACCAATGCCATATAACTTTCCCAACCTTAAACACCTTTATTTGGGATTGAACGACTTTAGTGGTCCAATTCCTGATGATATAGGTTTGTTATCAGGTCTGGAAATTTTTGAAGTGCATAACAATTCCCTTGAAGGGAAAATCCCATCCTCTATAGGCCAACTCAAGGAGCTTCAGCGCCTTGATCTTTCATGGAATTCATTAAACTCTTCAATCCCTTCTGAGCTTGGTACATGTACCAACCTCACTTTCTTGGCCTTGGCTGTGAACAAACTCAGTGGGGAAGTGCCTCTGTCCTTGTCAAAATTGACCAACTTGGTGGAATTGGGATTATCTGATAATCTATTTACTGGACCAATCTTGCCTTCTCTGGTTTCCAATTGGTCTGAAATGGTCTCTATTCAATTCCAAAACAATAGCTTCAGTGGGAACATTCCAGCAGATATTGGCCTATTGACAAATCTTAATCTCCTCTTTCTGTACAAAAATAATTTCACAGACCCAATTCCCTCAGAGATAGGAAACTTGCAAGCTATGAAAAGTTTGGATCTTTCGGAAAACCAGCTCTCCGGGCCGATTCCTATGGCACTCTGGAATCTCACTAATCTTCAGGATGTAAAGCTTTTCTCCAATAACCTCCGTGGCACAATCCCGCCAGAGATTGGAAACATGAGTTCCATGGTTACCTTTGACGTCAGCAGAAACCAACTTCAGGGGGAGTTGCCAAAAACTATTTCTCTCCTTAGAAAACTAGAGGGGTTTTCTGTTTTAATTAATAGGTTTTCGGGGACCGTTCCCCGTGATTTCGGGAAGTATAGTCCTAACTTGACATTTGTTAACTTCGCGGATAACAGCTTCTCTGGAGAATTGCCGCCAGACTTGTGTAGTGGATTTGCCTTGCAGATGTTCTCAGTGCAGTTCAACGACTTCACAGGGCCATTACCTGGGTGCTTGAGAAATTGTACTGCATTAATAAGATTGCGGCTTGATGAGAACCAATTCACCGGGGAGATTACCAATGCATTTGGTGTTCATCCTAGCCTCAAAGTAATCTATCTAAGTCACAACAAATTCGTTGGTCAACTCTCGCCACAATGGGGAGAATGCAAAAACATCACGGATATGCAAATGGACGAGAATAGAATTTCTGGTCAAATCCCACCTGAGCTTGGCCAGTTGACACAGTTGCAGTATCTGACTCTAAGCTCTAATGAATTCAGTGGGGAATTTCCAGTTTCCATTGGGAATCTAAGCTTGTTGTTTACTCTTAATCTCAGCAGGAACCACTTGACGGGAACTGTCCCTCATGTTCTAGGCAAATTGCCTAAGCTCAAGCTTCTTGATTTGTCTGATAATAATTTTACAGGGGTATTACCAGTCGACCAGGGAACGTTTCAGAGGTTAACAAGCTTGAACATGAGCCACAACAAATTATCGGGTGGAATACCTGAGGAGATTGGTAATCTACACCTGCGGTACTTGTTGGACTTAAGCAGCAATTCGTTCTCGGGATCATTACCGCTGAACTTTGCCAAGCTTATAATGCTGGAGATTCTTAATGTCTCGCATAACCAACTCTCCGGGAATATCCCATCAACATTTTCCAGAATGGTTAGTCTTGTCGGCATTGATTTTTCTTACAACAACTTGACAGGTCCAGTCCCAACTGGTGGCATTTTCCAAAAGAAGCTTCCGAATAATGCTTTCATTGGAAATAGTGGTTTGTGTGGTGAAACAGAGGGACTAACTCCATGCACTTCGGGTCCCATAAAGTCCAACAAGAAAATTCTTGTTGGCGTCCTTGTTCCCATTTTTGCTATATTTTTTATGGTGACCATATCTGCTGTAATCCTTAAGTTCTGCAAGAAATCGAAGCTTGGAGAATTCGATCATCCTAAGGTGTCTGAAAGTTTTGATTCAATTATTTGGGGAAGACATGGTAAATTTAAATTTTCTGAAATCATCACTGCCACCGAGAACTTTGATGAAAAGTACCTCATTGGAAGAGGAAGTTTTGGAAGTGTCTACAAGGCTGTGTTGGACAGGGGCAGAGTCGTTGCAGTTAAGAAATTGAATATGTCAGTAGATTCTAGTGACAACATTGCAGAATTGAATCGCAAGTGTTTTGAGAATGAGATAAGAACTTTGACAGAAGTGAAGCACAAAAATGTAATAAAACTTTATGGGTTCTGCTCCTGGAAGGGGTGCTTGCACTTGGTGTTTGAATATGCAGAGAGAGGCAGTTTGAAAATGGTATTGTATGGAGTGGAGGGGGAAGCAGAAGTACTTGGGTGGGGCACGAGGGTGAAAGTTGTGCAAGGAATAGCTCATGCTATTTCTCACTTGCATAGTGATTGCTCTCACCCAATCATTCACCGCGACATAACTTTGAGCAACATATTACTAGATCGAGATTTCGTGCCACGCCTATCTGACTTTGGAACAGCAAGACTACTGAGCTCAGATTCCTCAAAGTGGACTGCTGTAGCGGGGTCTTATGGCTACATGGCTCCAGAGCTCGCATTCACAATGCACGTGACAGAGAAGTGTGATGTATACAGCTTTGGAGTGGTGGCATTAGAAATCATGATGGGAAGGCATCCAGGAGAGCTACTGAATTCTCTATCGGAAAATGGAGATATGCTTTTGAAGGATTTGCTAGACCAACGACTTCGGTCTCCTTCAAGTCAATTAGCAGTGCGAGTGGTTTCCTTGGTAACGATGGCCTTGGCCTGCACCAGCACTAAGCCGGATTCACGACCCACCATGCATTGTGTGGCAAAAGAACTATCATCCACTAGGACCCGGACTAGCCTCTCTGAGCCGTTAGGCACAATAACCATCAATGAGTTGGCAAGTTTTCATAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1201

Amino Acids

132.92

Weight (kDa)

6.28

Isoelectric Point (pI)

32.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 43 - 81 2.2e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 108 - 210 6.4e-06 Leucine-rich repeat region
LRR_8 PF13855 192 - 243 1.8e-06 Leucine rich repeat
LRR_14 PF23598 253 - 356 5.1e-09 Leucine-rich repeat region
LRR_14 PF23598 633 - 733 2.2e-08 Leucine-rich repeat region
LRR_8 PF13855 639 - 698 1e-07 Leucine rich repeat
Pkinase PF00069 907 - 1170 9.9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 910 - 1174 1.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2273
AarI CACCTGC 1 cut(s) 2211
AatII GACGTC 1 cut(s) 1428
Acc36I ACCTGC 1 cut(s) 2211
AccB7I CCANNNNNTGG 3 cut(s) 1394, 1676, 2402
AccI GTMKAC 3 cut(s) 2112, 2757, 3288
AccII CGCG 3 cut(s) 58, 1577, 3111
AclI AACGTT 1 cut(s) 2123
AclWI GGATC 3 cut(s) 23, 1287, 2251
AcoI YGGCCR 2 cut(s) 658, 1903
AcuI CTGAAG 5 cut(s) 153, 890, 1138, 1325, 1427
AcvI CACGTG 1 cut(s) 3268
AcyI GRCGYC 2 cut(s) 1425, 2529
AdeI CACNNNGTG 1 cut(s) 2950
AfaI GTAC 8 cut(s) 480, 964, 970, 1214, 1696, 2210, 2726, 3018
AflII CTTAAG 2 cut(s) 2221, 2585
AflIII ACRYGT 1 cut(s) 965
AjnI CCWGG 4 cut(s) 1675, 2115, 2927, 3334
AleI CACNNNNGTG 1 cut(s) 3035
Alw21I GWGCWC 3 cut(s) 24, 3194, 3252
Alw26I GTCTC 5 cut(s) 65, 645, 1132, 2299, 3414
AlwI GGATC 3 cut(s) 23, 1287, 2251
AlwNI CAGNNNCTG 2 cut(s) 263, 1927
Ama87I CYCGRG 1 cut(s) 2239
ApeKI GCWGC 4 cut(s) 4, 38, 296, 2226
AseI ATTAAT 2 cut(s) 1506, 1703
Asp700I GAANNNNTTC 1 cut(s) 1730
AspLEI GCGC 1 cut(s) 912
AsuC2I CCSGG 4 cut(s) 1303, 1738, 2314, 3538
AvaI CYCGRG 1 cut(s) 2239
AvaII GGWCC 7 cut(s) 734, 797, 1085, 1521, 2387, 2495, 3534
AxyI CCTNAGG 2 cut(s) 2181, 2628
BaeGI GKGCMC 1 cut(s) 3032
BalI TGGCCA 2 cut(s) 660, 1905
BanII GRGCYC 2 cut(s) 3194, 3252
BarI GAAGNNNNNNTAC 2 cut(s) 3000, 3032
BauI CACGAG 1 cut(s) 3031
BbrPI CACGTG 1 cut(s) 3268
BbsI GAAGAC 1 cut(s) 2671
Bbv12I GWGCWC 3 cut(s) 24, 3194, 3252
BbvI GCAGC 4 cut(s) 16, 50, 308, 2238
BccI CCATC 7 cut(s) 388, 454, 886, 2332, 3316, 3448, 3581
BceAI ACGGC 1 cut(s) 3541
BciT130I CCWGG 4 cut(s) 1677, 2117, 2929, 3336
BcnI CCSGG 4 cut(s) 1303, 1738, 2314, 3538
BcoDI GTCTC 5 cut(s) 65, 645, 1132, 2299, 3414
BfmI CTRYAG 3 cut(s) 294, 885, 3216
BfoI RGCGCY 1 cut(s) 913
BfrI CTTAAG 2 cut(s) 2221, 2585
BfuAI ACCTGC 1 cut(s) 2211
BisI GCNGC 6 cut(s) 5, 39, 297, 1604, 1715, 2227
BlsI GCNGC 6 cut(s) 6, 40, 298, 1605, 1716, 2228
BmcAI AGTACT 1 cut(s) 3018
Bme1390I CCNGG 8 cut(s) 1303, 1677, 1738, 2117, 2314, 2929, 3336, 3538
Bme18I GGWCC 7 cut(s) 734, 797, 1085, 1521, 2387, 2495, 3534
BmeT110I CYCGRG 1 cut(s) 2239
BmiI GGNNCC 6 cut(s) 1522, 2015, 2496, 2497, 3243, 3536
BmrFI CCNGG 8 cut(s) 1303, 1677, 1738, 2117, 2314, 2929, 3336, 3538
BmsI GCATC 1 cut(s) 3340
BoxI GACNNNNGTC 1 cut(s) 3406
BpiI GAAGAC 1 cut(s) 2671
BpmI CTGGAG 4 cut(s) 122, 1614, 2300, 3228
Bpu10I CCTNAGC 3 cut(s) 42, 1896, 2058
BpuEI CTTGAG 3 cut(s) 881, 1705, 2048
BpuMI CCSGG 4 cut(s) 1303, 1738, 2314, 3538
BsaAI YACGTR 1 cut(s) 3268
BsaHI GRCGYC 2 cut(s) 1425, 2529
BsaI GGTCTC 2 cut(s) 1132, 3414
BsaJI CCNNGG 9 cut(s) 730, 990, 1372, 1410, 1676, 1737, 2116, 3444, 3459
BsaXI ACNNNNNCTCC 4 cut(s) 1283, 1313, 2294, 2324
Bse1I ACTGG 9 cut(s) 105, 227, 661, 1087, 1906, 1964, 2108, 2390, 2404
Bse21I CCTNAGG 2 cut(s) 2181, 2628
Bse3DI GCAATG 1 cut(s) 2832
BseBI CCWGG 4 cut(s) 1677, 2117, 2929, 3336
BseDI CCNNGG 9 cut(s) 730, 990, 1372, 1410, 1676, 1737, 2116, 3444, 3459
BseGI GGATG 6 cut(s) 878, 1351, 1765, 2623, 3331, 3524
BseMI GCAATG 1 cut(s) 2832
BseNI ACTGG 9 cut(s) 105, 227, 661, 1087, 1906, 1964, 2108, 2390, 2404
BseRI GAGGAG 4 cut(s) 53, 56, 1193, 2198
BseSI GKGCMC 1 cut(s) 3032
BseXI GCAGC 4 cut(s) 16, 50, 308, 2238
BsgI GTGCAG 2 cut(s) 1667, 3451
Bsh1236I CGCG 3 cut(s) 58, 1577, 3111
BsiHKAI GWGCWC 3 cut(s) 24, 3194, 3252
BsiHKCI CYCGRG 1 cut(s) 2239
BsiSI CCGG 5 cut(s) 1302, 1737, 2313, 3482, 3538
BslFI GGGAC 5 cut(s) 1534, 2018, 2378, 2481, 2487
BsmAI GTCTC 5 cut(s) 65, 645, 1132, 2299, 3414
BsmBI CGTCTC 1 cut(s) 65
BsmFI GGGAC 5 cut(s) 1534, 2018, 2378, 2481, 2487
BsmI GAATGC 2 cut(s) 1841, 3254
Bso31I GGTCTC 2 cut(s) 1132, 3414
BsoBI CYCGRG 1 cut(s) 2239
Bsp1286I GDGCHC 4 cut(s) 24, 3032, 3194, 3252
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
Bsp19I CCATGG 1 cut(s) 1410
BspFNI CGCG 3 cut(s) 58, 1577, 3111
BspHI TCATGA 2 cut(s) 30, 3318
BspLI GGNNCC 6 cut(s) 1522, 2015, 2496, 2497, 3243, 3536
BspMAI CTGCAG 1 cut(s) 298
BspMI ACCTGC 1 cut(s) 2211
BspPI GGATC 3 cut(s) 23, 1287, 2251
BspTI CTTAAG 2 cut(s) 2221, 2585
BspTNI GGTCTC 2 cut(s) 1132, 3414
BsrDI GCAATG 1 cut(s) 2832
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 9 cut(s) 105, 227, 661, 1087, 1906, 1964, 2108, 2390, 2404
BssECI CCNNGG 9 cut(s) 730, 990, 1372, 1410, 1676, 1737, 2116, 3444, 3459
BssMI GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
BssNAI GTATAC 1 cut(s) 3289
BssNI GRCGYC 2 cut(s) 1425, 2529
BssSI CACGAG 1 cut(s) 3031
BssT1I CCWWGG 5 cut(s) 730, 990, 1410, 3444, 3459
Bst1107I GTATAC 1 cut(s) 3289
Bst2BI CACGAG 1 cut(s) 3031
Bst2UI CCWGG 4 cut(s) 1677, 2117, 2929, 3336
Bst4CI ACNGT 4 cut(s) 259, 1525, 1917, 2032
Bst6I CTCTTC 2 cut(s) 946, 2731
BstACI GRCGYC 2 cut(s) 1425, 2529
BstAFI CTTAAG 2 cut(s) 2221, 2585
BstAUI TGTACA 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 3268
BstC8I GCNNGC 5 cut(s) 516, 1263, 2942, 3252, 3466
BstDSI CCRYGG 2 cut(s) 1372, 1410
BstEII GGTNACC 2 cut(s) 1414, 2563
BstF5I GGATG 6 cut(s) 878, 1351, 1765, 2623, 3331, 3524
BstFNI CGCG 3 cut(s) 58, 1577, 3111
BstH2I RGCGCY 1 cut(s) 913
BstHHI GCGC 1 cut(s) 912
BstKTI GATC 7 cut(s) 18, 565, 919, 1282, 2246, 2623, 3142
BstMAI GTCTC 5 cut(s) 65, 645, 1132, 2299, 3414
BstMBI GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
BstMWI GCNNNNNNNGC 3 cut(s) 91, 1303, 2275
BstNI CCWGG 4 cut(s) 1677, 2117, 2929, 3336
BstNSI RCATGY 1 cut(s) 969
BstPAI GACNNNNGTC 1 cut(s) 3406
BstPI GGTNACC 2 cut(s) 1414, 2563
BstSCI CCNGG 8 cut(s) 1301, 1675, 1736, 2115, 2312, 2927, 3334, 3536
BstSFI CTRYAG 3 cut(s) 294, 885, 3216
BstSLI GKGCMC 1 cut(s) 3032
BstUI CGCG 3 cut(s) 58, 1577, 3111
BstV1I GCAGC 4 cut(s) 16, 50, 308, 2238
BstV2I GAAGAC 1 cut(s) 2671
BstX2I RGATCY 1 cut(s) 1279
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 1279
BstZ17I GTATAC 1 cut(s) 3289
Bsu36I CCTNAGG 2 cut(s) 2181, 2628
BtgI CCRYGG 2 cut(s) 1372, 1410
BtsCI GGATG 6 cut(s) 878, 1351, 1765, 2623, 3331, 3524
BtsI GCAGTG 3 cut(s) 291, 2697, 3435
BtsIMutI CAGTG 8 cut(s) 98, 291, 1015, 1162, 1650, 1957, 2697, 3435
BveI ACCTGC 1 cut(s) 2211
Cac8I GCNNGC 5 cut(s) 516, 1263, 2942, 3252, 3466
CaiI CAGNNNCTG 2 cut(s) 263, 1927
CciI TCATGA 2 cut(s) 30, 3318
CfoI GCGC 1 cut(s) 912
CseI GACGC 2 cut(s) 47, 2518
Csp6I GTAC 8 cut(s) 479, 963, 969, 1213, 1695, 2209, 2725, 3017
CspCI CAANNNNNGTGG 2 cut(s) 991, 1026
CviQI GTAC 8 cut(s) 479, 963, 969, 1213, 1695, 2209, 2725, 3017
DpnI GATC 7 cut(s) 17, 564, 918, 1281, 2245, 2622, 3141
DpnII GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
DraI TTTAAA 1 cut(s) 2680
DraIII CACNNNGTG 1 cut(s) 2950
EaeI YGGCCR 2 cut(s) 658, 1903
Eam1104I CTCTTC 2 cut(s) 946, 2731
EarI CTCTTC 2 cut(s) 946, 2731
Ecl136II GAGCTC 2 cut(s) 3192, 3250
Eco130I CCWWGG 5 cut(s) 730, 990, 1410, 3444, 3459
Eco24I GRGCYC 2 cut(s) 3194, 3252
Eco31I GGTCTC 2 cut(s) 1132, 3414
Eco47I GGWCC 7 cut(s) 734, 797, 1085, 1521, 2387, 2495, 3534
Eco53kI GAGCTC 2 cut(s) 3192, 3250
Eco57I CTGAAG 5 cut(s) 153, 890, 1138, 1325, 1427
Eco72I CACGTG 1 cut(s) 3268
Eco81I CCTNAGG 2 cut(s) 2181, 2628
Eco88I CYCGRG 1 cut(s) 2239
Eco91I GGTNACC 2 cut(s) 1414, 2563
EcoICRI GAGCTC 2 cut(s) 3192, 3250
EcoO109I RGGNCCY 3 cut(s) 371, 2495, 3534
EcoO65I GGTNACC 2 cut(s) 1414, 2563
EcoRI GAATTC 5 cut(s) 184, 928, 1946, 2615, 3349
EcoRII CCWGG 4 cut(s) 1675, 2115, 2927, 3334
EcoT14I CCWWGG 5 cut(s) 730, 990, 1410, 3444, 3459
EcoT22I ATGCAT 2 cut(s) 1756, 3504
EcoT38I GRGCYC 2 cut(s) 3194, 3252
ErhI CCWWGG 5 cut(s) 730, 990, 1410, 3444, 3459
Esp3I CGTCTC 1 cut(s) 65
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 2924, 2956
FaqI GGGAC 5 cut(s) 1534, 2018, 2378, 2481, 2487
FauI CCCGC 2 cut(s) 1392, 3214
FblI GTMKAC 3 cut(s) 2112, 2757, 3288
Fnu4HI GCNGC 6 cut(s) 5, 39, 297, 1604, 1715, 2227
FokI GGATG 6 cut(s) 865, 1358, 1752, 2610, 3318, 3511
FriOI GRGCYC 2 cut(s) 3194, 3252
Fsp4HI GCNGC 6 cut(s) 5, 39, 297, 1604, 1715, 2227
GlaI GCGC 1 cut(s) 911
GluI GCNGC 6 cut(s) 5, 39, 297, 1604, 1715, 2227
GsuI CTGGAG 4 cut(s) 122, 1614, 2300, 3228
HaeII RGCGCY 1 cut(s) 913
HapII CCGG 5 cut(s) 1302, 1737, 2313, 3482, 3538
HgaI GACGC 2 cut(s) 47, 2518
HhaI GCGC 1 cut(s) 912
Hin1I GRCGYC 2 cut(s) 1425, 2529
Hin6I GCGC 1 cut(s) 910
HinP1I GCGC 1 cut(s) 910
HincII GTYRAC 6 cut(s) 552, 1570, 1814, 1911, 2113, 2136
HindII GTYRAC 6 cut(s) 552, 1570, 1814, 1911, 2113, 2136
HindIII AAGCTT 8 cut(s) 695, 1352, 1984, 2066, 2140, 2267, 2420, 2606
HpaI GTTAAC 2 cut(s) 1570, 2136
HpaII CCGG 5 cut(s) 1302, 1737, 2313, 3482, 3538
Hpy99I CGWCG 1 cut(s) 323
HpyAV CCTTC 9 cut(s) 80, 186, 860, 960, 1107, 2926, 3321, 3376, 3423
HpyCH4III ACNGT 4 cut(s) 259, 1525, 1917, 2032
HpyCH4IV ACGT 3 cut(s) 1425, 2123, 3267
HpyF10VI GCNNNNNNNGC 3 cut(s) 91, 1303, 2275
HpySE526I ACGT 3 cut(s) 1425, 2123, 3267
Hsp92I GRCGYC 2 cut(s) 1425, 2529
HspAI GCGC 1 cut(s) 910
KflI GGGWCCC 1 cut(s) 2495
KspAI GTTAAC 2 cut(s) 1570, 2136
Kzo9I GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
LmnI GCTCC 3 cut(s) 901, 2930, 3247
Lsp1109I GCAGC 4 cut(s) 16, 50, 308, 2238
LweI GCATC 1 cut(s) 3340
MaeII ACGT 3 cut(s) 1425, 2123, 3267
MaeIII GTNAC 7 cut(s) 500, 1414, 1793, 2563, 2825, 3268, 3448
MalI GATC 7 cut(s) 17, 564, 918, 1281, 2245, 2622, 3141
MboI GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
MboII GAAGA 6 cut(s) 159, 163, 933, 1331, 2676, 2748
MfeI CAATTG 1 cut(s) 1111
MflI RGATCY 1 cut(s) 1279
MhlI GDGCHC 4 cut(s) 24, 3032, 3194, 3252
MlsI TGGCCA 2 cut(s) 660, 1905
MluNI TGGCCA 2 cut(s) 660, 1905
MlyI GAGTC 3 cut(s) 578, 1924, 2793
MmeI TCCRAC 3 cut(s) 2196, 2532, 2751
Mox20I TGGCCA 2 cut(s) 660, 1905
Mph1103I ATGCAT 2 cut(s) 1756, 3504
MroXI GAANNNNTTC 1 cut(s) 1730
MscI TGGCCA 2 cut(s) 660, 1905
MslI CAYNNNNRTG 3 cut(s) 1853, 2898, 3035
Msp20I TGGCCA 2 cut(s) 660, 1905
MspA1I CMGCKG 1 cut(s) 2254
MspCI CTTAAG 2 cut(s) 2221, 2585
MspI CCGG 5 cut(s) 1302, 1737, 2313, 3482, 3538
MspR9I CCNGG 8 cut(s) 1303, 1677, 1738, 2117, 2314, 2929, 3336, 3538
MunI CAATTG 1 cut(s) 1111
Mva1269I GAATGC 2 cut(s) 1841, 3254
MvaI CCWGG 4 cut(s) 1677, 2117, 2929, 3336
MvnI CGCG 3 cut(s) 58, 1577, 3111
MwoI GCNNNNNNNGC 3 cut(s) 91, 1303, 2275
NciI CCSGG 4 cut(s) 1303, 1738, 2314, 3538
NcoI CCATGG 1 cut(s) 1410
NdeII GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
NlaIV GGNNCC 6 cut(s) 1522, 2015, 2496, 2497, 3243, 3536
NmuCI GTSAC 4 cut(s) 1793, 2563, 2825, 3268
NsiI ATGCAT 2 cut(s) 1756, 3504
NspI RCATGY 1 cut(s) 969
OliI CACNNNNGTG 1 cut(s) 3035
PacI TTAATTAA 1 cut(s) 1506
PagI TCATGA 2 cut(s) 30, 3318
PaqCI CACCTGC 1 cut(s) 2211
PciI ACATGT 1 cut(s) 965
PctI GAATGC 2 cut(s) 1841, 3254
PdmI GAANNNNTTC 1 cut(s) 1730
PfeI GAWTC 9 cut(s) 1309, 1327, 1978, 2284, 2648, 2819, 2845, 3197, 3485
PflMI CCANNNNNTGG 3 cut(s) 1394, 1676, 2402
PfoI TCCNGGA 3 cut(s) 2312, 2927, 3334
PkrI GCNGC 6 cut(s) 6, 40, 298, 1605, 1716, 2228
PleI GAGTC 3 cut(s) 578, 1924, 2792
PmaCI CACGTG 1 cut(s) 3268
PmlI CACGTG 1 cut(s) 3268
PpsI GAGTC 3 cut(s) 578, 1924, 2792
Ppu21I YACGTR 1 cut(s) 3268
PpuMI RGGWCCY 2 cut(s) 2495, 3534
PscI ACATGT 1 cut(s) 965
PshAI GACNNNNGTC 1 cut(s) 3406
PshBI ATTAAT 2 cut(s) 1506, 1703
PsiI TTATAA 1 cut(s) 2273
Psp124BI GAGCTC 2 cut(s) 3194, 3252
Psp1406I AACGTT 1 cut(s) 2123
Psp5II RGGWCCY 2 cut(s) 2495, 3534
Psp6I CCWGG 4 cut(s) 1675, 2115, 2927, 3334
PspCI CACGTG 1 cut(s) 3268
PspEI GGTNACC 2 cut(s) 1414, 2563
PspGI CCWGG 4 cut(s) 1675, 2115, 2927, 3334
PspN4I GGNNCC 6 cut(s) 1522, 2015, 2496, 2497, 3243, 3536
PspPPI RGGWCCY 2 cut(s) 2495, 3534
PstI CTGCAG 1 cut(s) 298
PstNI CAGNNNCTG 2 cut(s) 263, 1927
PsuI RGATCY 1 cut(s) 1279
RsaI GTAC 8 cut(s) 480, 964, 970, 1214, 1696, 2210, 2726, 3018
RsaNI GTAC 8 cut(s) 479, 963, 969, 1213, 1695, 2209, 2725, 3017
RseI CAYNNNNRTG 3 cut(s) 1853, 2898, 3035
SacI GAGCTC 2 cut(s) 3194, 3252
SalI GTCGAC 1 cut(s) 2111
SatI GCNGC 6 cut(s) 5, 39, 297, 1604, 1715, 2227
Sau3AI GATC 7 cut(s) 15, 562, 916, 1279, 2243, 2620, 3139
ScaI AGTACT 1 cut(s) 3018
SchI GAGTC 3 cut(s) 578, 1924, 2793
ScrFI CCNGG 8 cut(s) 1303, 1677, 1738, 2117, 2314, 2929, 3336, 3538
SduI GDGCHC 4 cut(s) 24, 3032, 3194, 3252
SfaNI GCATC 1 cut(s) 3340
SfcI CTRYAG 3 cut(s) 294, 885, 3216
SinI GGWCC 7 cut(s) 734, 797, 1085, 1521, 2387, 2495, 3534
SmiI ATTTAAAT 1 cut(s) 2680
SmiMI CAYNNNNRTG 3 cut(s) 1853, 2898, 3035
SmlI CTYRAG 5 cut(s) 896, 1684, 2063, 2221, 2585
SmoI CTYRAG 5 cut(s) 896, 1684, 2063, 2221, 2585
SspI AATATT 1 cut(s) 485
SstI GAGCTC 2 cut(s) 3194, 3252
StyD4I CCNGG 8 cut(s) 1301, 1675, 1736, 2115, 2312, 2927, 3334, 3536
StyI CCWWGG 5 cut(s) 730, 990, 1410, 3444, 3459
SwaI ATTTAAAT 1 cut(s) 2680
TaaI ACNGT 4 cut(s) 259, 1525, 1917, 2032
TaiI ACGT 3 cut(s) 1428, 2126, 3270
TaqI TCGA 6 cut(s) 18, 318, 2112, 2603, 2619, 3142
TaqII GACCGA 1 cut(s) 3396
TatI WGTACW 3 cut(s) 1212, 1694, 3016
TauI GCSGC 2 cut(s) 1606, 1717
TfiI GAWTC 9 cut(s) 1309, 1327, 1978, 2284, 2648, 2819, 2845, 3197, 3485
TscAI CASTG 8 cut(s) 105, 298, 1015, 1162, 1650, 1957, 2704, 3435
TseFI GTSAC 4 cut(s) 1793, 2563, 2825, 3268
TseI GCWGC 4 cut(s) 4, 38, 296, 2226
Tsp45I GTSAC 4 cut(s) 1793, 2563, 2825, 3268
TspGWI ACGGA 2 cut(s) 1361, 1865
TspRI CASTG 8 cut(s) 105, 298, 1015, 1162, 1650, 1957, 2704, 3435
Van91I CCANNNNNTGG 3 cut(s) 1394, 1676, 2402
Vha464I CTTAAG 2 cut(s) 2221, 2585
VpaK11BI GGWCC 7 cut(s) 734, 797, 1085, 1521, 2387, 2495, 3534
VspI ATTAAT 2 cut(s) 1506, 1703
XceI RCATGY 1 cut(s) 969
XcmI CCANNNNNNNNNTGG 2 cut(s) 3505, 3580
XmiI GTMKAC 3 cut(s) 2112, 2757, 3288
XmnI GAANNNNTTC 1 cut(s) 1730
ZraI GACGTC 1 cut(s) 1426
ZrmI AGTACT 1 cut(s) 3018
Zsp2I ATGCAT 2 cut(s) 1756, 3504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.