MD00G1124500.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
26635155 .. 26637513
2359 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1124500.v1.1.491

Sequence Viewer

Length: 2094 bp
ATGACATTTCTTTATATGCTCCTGCTGCTGTCCGCATTCCCACTGATCAAAACGACATCAATATCGCCAAGACAACAAGCTGAATCGCTCATCAAATGGAAGGACGACTGGTCTTCATCACCTTCGCTACTCAATTCATGGTCCCTCACCAACCTCAACAGCCTCTGCAACTGGACTGCCATTTCCTGCTCCAAAACCAGAACGGTCTCCAAAATAGACCTCTCCAATATGTACATTATCGGATCACTGTCCCTTTTCGACTTTCCCTTATTTCCAAATCTCACCCACTTCAATCTAAATGGCAACAATTTCCTAGGGCGTATACCGTATGCCATTGGAAATCTCTCCAGGCTCACATCTTTGGACTTGGGCAACAACTTGTTTGATCAACAAATTCCATCTGAATTTACAGGCATGCCTTCATTGACGTTCCTCGACTTGTCTCAAAATAATTTGTTTGGCCAAATTCCAACTTCGATTGGCCAACTTAGAAAGCTTCAGTACCTTGATCTTTCATACAACTCCTTAAACTCTTCTATCCCTCTCTCTGTAGGCCAACTCAGGGAGCTCCAGTACCTTGATCTTTCATACAACTCCTTAAACTCTTCTATCCCTGTCTCTATAGGCCAACTCAGGGAGCTCCAGTACCTTGATCTTTCATACAACTCCTTAAACTCTTCTATCCCTTCTGAGCTTGGTCTTTGTACAAGCCTCACGCACTTGTACCTGGCTTCCAATAAACTCAACGGGGAACTGCCTCTGTCCTTGTTCAATCTGAACAACCTTGTCGAATTGGGTTTGGATAATAATCTATTTACTGGTCAAATCCTTCCTTCTCTGGTCTTCAATTGGACTAAAATGGTCTCTTTGCAACTTCAGTCCAATGAACTCAGTGGGGAGATTCCTCAGAATCTAGGCAATTTATCTCAGCTTCAGCTGCTCGATTTGTCACACAACCATCTTTCAGGGCAAATCCCACCATTTGTCAACGTGTTATCTCTTCCTGACTTTGATTTTTCTTATAACAACTTGACTGGCCTAATCCCATACAACTTCCAATGGGCACCAGCAAATGCTTTTGCTGGAAACTCTGGCTTGTGTGGGTATGTACAAGGACTAGACAGTATATCAACTTGCCCCAACAGAAATTCCGCAAAGAATAACAAAAGAGTTCTAATTGGTGTCCTTGTACCTGTTTGTGGTTTATTAATGGTTACAATTGTCATTGGTCTTATGTTCCGTAAAAAATCCAGTCTCGTTTTGAACAAAGTCAACACTTCTGAAAACTTTGAGAGTTTGGAGTCAATGATATTGCAAGAGGAAGTAAAGTTTACGTTTGCGGAAGTTGTGAAGGCTGTAGATGACTTTCATGAGAAGTACTGCATTGGGACAGGAGGGTTTGGAAGGGTTTACAAGGCAGAGTTGCAATCAGGCCAAGTTGTTGCAAGAGGAAGCCTGGGAAAAACTTTGTATGGAGTTGAAGGTGTTAATGAACTTGGTTGGGCTACTAGAGTCAAAATTGTGCAAGGACTTGCTCATGCACTTTCTTACTTGCACCATGATTGCTCTCCACCAATTGTGCACCGTGACATAACCGTCAATAATGTATTGCTTGAGTCTAATTTCGAGGTTCGTCTCTCAGATTTCGGAATAGCCAGGTTATTGAGTACTGATTCATCCAACTGGACAGATATTGCTGGTTCGTTTGGCTACATAGCACCAGAGCTTGCATACACTATGCGAGTCACGGATAAATGTGATGTATATAGCTTTGGAGTGGTGGCGCTCGAAGTCATGATGGGAAGGCACCCAGGGGATATGCTAGAGTCCCAGCTACAAGAATCATCAAAATCAAGGAGGGACAATGTAGAATTGCTCCTGAAAGATTTGTTAGACCAAAGGTTGGAGCCGCCAACCAATGAATCTGCAAAGGCAGTGGTGCTTGTGGTGACAATGGCCTTGGCCTGTATACGAACGCGTCCTGCGTCCAGACCCACGATGTTATTTGTGGCACAAAAACTCTCGGCTCAAACCCTGCCTTGCCTTCCCGAACCATTTGGTATGTTGACAATCAACAAGCTAATGGCACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

698

Amino Acids

77.13

Weight (kDa)

5.77

Isoelectric Point (pI)

36.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 92 - 152 1.7e-09 Leucine rich repeat
LRR_14 PF23598 142 - 218 5.6e-10 Leucine-rich repeat region
LRR_8 PF13855 159 - 200 7e-07 Leucine rich repeat
LRR_14 PF23598 180 - 267 1.2e-08 Leucine-rich repeat region
LRR_14 PF23598 199 - 320 5e-08 Leucine-rich repeat region
LRR_8 PF13855 209 - 248 6.8e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 482 - 673 6.7e-23 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 506 - 667 6.1e-24 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08850 AT4G08850
fragaria_vesca FvH4_2g07670 FvH4_2g07680 FvH4_2g20750 FvH4_2g20750 FvH4_2g20790 FvH4_3g14180 FvH4_3g14180 FvH4_3g14230 FvH4_3g14330 FvH4_3g14340 FvH4_3g14340 FvH4_3g14360 FvH4_3g14370 FvH4_3g14371 FvH4_3g16410 FvH4_4g04540 FvH4_4g33281 FvH4_5g24120 FvH4_5g36290 FvH4_5g37480 FvH4_5g37490 FvH4_5g37510 FvH4_5g37510 FvH4_5g37520 FvH4_5g37560 FvH4_5g37580 FvH4_5g37590 FvH4_5g37590 FvH4_5g37590 FvH4_5g37790 FvH4_5g37800 FvH4_6g38120
malus_domestica MD00G1009600.v1.1 MD00G1061200.v1.1 MD00G1123900.v1.1 MD00G1124200.v1.1 MD00G1124500.v1.1 MD00G1124700.v1.1 MD00G1170400.v1.1 MD00G1170700.v1.1 MD01G1002100.v1.1 MD03G1036100.v1.1 MD04G1006600.v1.1 MD04G1006800.v1.1 MD04G1039700.v1.1 MD04G1039900.v1.1 MD05G1189800.v1.1 MD05G1190000.v1.1 MD05G1190200.v1.1 MD05G1190400.v1.1 MD05G1190600.v1.1 MD05G1190700.v1.1 MD05G1190800.v1.1 MD05G1190900.v1.1 MD05G1191200.v1.1 MD05G1191500.v1.1 MD08G1025100.v1.1 MD08G1025500.v1.1 MD08G1094500.v1.1 MD08G1094600.v1.1 MD08G1175000.v1.1 MD08G1175100.v1.1 MD08G1175200.v1.1 MD08G1175300.v1.1 MD08G1175400.v1.1 MD08G1178900.v1.1 MD08G1179000.v1.1 MD08G1179200.v1.1 MD09G1153000.v1.1 MD09G1153100.v1.1 MD09G1153200.v1.1 MD09G1153300.v1.1 MD09G1153400.v1.1 MD09G1153700.v1.1 MD09G1153800.v1.1 MD10G1178100.v1.1 MD10G1178200.v1.1 MD10G1214300.v1.1 MD10G1214500.v1.1 MD10G1214600.v1.1 MD10G1215200.v1.1 MD11G1221700.v1.1 MD12G1229500.v1.1 MD12G1229600.v1.1 MD12G1229700.v1.1 MD13G1018200.v1.1 MD15G1367500.v1.1 MD15G1367600.v1.1 MD15G1367700.v1.1 MD15G1367800.v1.1 MD15G1437200.v1.1 MD15G1437400.v1.1 MD17G1140300.v1.1 MD17G1140400.v1.1 MD17G1153200.v1.1
prunus_persica Prupe.1G510800_v2.0.a1 Prupe.1G513300_v2.0.a1 Prupe.1G513400_v2.0.a1 Prupe.1G514100_v2.0.a1 Prupe.1G514200_v2.0.a1 Prupe.1G515300_v2.0.a1 Prupe.1G515500_v2.0.a1 Prupe.1G515600_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515700_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G515900_v2.0.a1 Prupe.1G516000_v2.0.a1 Prupe.2G064900_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115800_v2.0.a1 Prupe.3G115900_v2.0.a1 Prupe.3G116000_v2.0.a1 Prupe.3G157900_v2.0.a1 Prupe.3G171200_v2.0.a1 Prupe.3G171300_v2.0.a1 Prupe.4G128800_v2.0.a1 Prupe.4G129000_v2.0.a1 Prupe.4G268100_v2.0.a1 Prupe.4G283700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.6G161700_v2.0.a1 Prupe.7G014300_v2.0.a1 Prupe.7G014400_v2.0.a1 Prupe.8G060800_v2.0.a1 Prupe.8G061100_v2.0.a1 Prupe.8G217000_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217100_v2.0.a1 Prupe.8G217200_v2.0.a1 Prupe.8G217300_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217400_v2.0.a1 Prupe.8G217600_v2.0.a1 Prupe.8G217700_v2.0.a1 Prupe.8G226900_v2.0.a1
pyrus_communis pycom04g03280 pycom04g03330 pycom05g17120 pycom05g17140 pycom05g17490 pycom05g17510 pycom05g17540 pycom05g17550 pycom05g17570 pycom05g17600 pycom05g17610 pycom05g17640 pycom05g17720 pycom05g17730 pycom05g17780 pycom05g17790 pycom05g17820 pycom08g15350 pycom08g15540 pycom08g15550 pycom08g15560 pycom09g07250 pycom09g07260 pycom10g02200 pycom10g15400 pycom10g18060 pycom10g18090 pycom10g18100 pycom10g18130 pycom10g18180 pycom10g18200 pycom13g01560 pycom13g14430 pycom14g10720 pycom14g10740 pycom15g32940 pycom15g32950 pycom15g32960 pycom15g32970 pycom15g38570 pycom15g38580 pycom17g13340 pycom17g13350 pycom17g13360
rosa_chinensis RchiOBHm_Chr0c16g0499671 RchiOBHm_Chr0c16g0499681 RchiOBHm_Chr0c16g0499691 RchiOBHm_Chr0c16g0499701 RchiOBHm_Chr0c16g0499741 RchiOBHm_Chr0c16g0499761 RchiOBHm_Chr0c16g0499771 RchiOBHm_Chr0c16g0499801 RchiOBHm_Chr0c16g0499831 RchiOBHm_Chr0c16g0499841 RchiOBHm_Chr0c16g0499881 RchiOBHm_Chr0c16g0499891 RchiOBHm_Chr0c16g0499931 RchiOBHm_Chr2g0151181 RchiOBHm_Chr2g0151221 RchiOBHm_Chr2g0151291 RchiOBHm_Chr2g0151311 RchiOBHm_Chr2g0151331 RchiOBHm_Chr2g0151341 RchiOBHm_Chr3g0483131 RchiOBHm_Chr3g0491341 RchiOBHm_Chr3g0493861 RchiOBHm_Chr3g0493881 RchiOBHm_Chr3g0493891 RchiOBHm_Chr4g0403001 RchiOBHm_Chr4g0409861 RchiOBHm_Chr4g0409901 RchiOBHm_Chr4g0409921 RchiOBHm_Chr4g0409931 RchiOBHm_Chr4g0412541 RchiOBHm_Chr4g0442461 RchiOBHm_Chr5g0021681 RchiOBHm_Chr5g0021711 RchiOBHm_Chr5g0023521 RchiOBHm_Chr5g0023721 RchiOBHm_Chr5g0023981 RchiOBHm_Chr5g0024241 RchiOBHm_Chr5g0033191 RchiOBHm_Chr5g0070881 RchiOBHm_Chr5g0070901 RchiOBHm_Chr6g0286931 RchiOBHm_Chr6g0286941 RchiOBHm_Chr6g0286951 RchiOBHm_Chr6g0287011 RchiOBHm_Chr6g0287031 RchiOBHm_Chr6g0287041 RchiOBHm_Chr6g0287061 RchiOBHm_Chr6g0287071 RchiOBHm_Chr6g0287081 RchiOBHm_Chr6g0287091 RchiOBHm_Chr6g0287101 RchiOBHm_Chr6g0287141 RchiOBHm_Chr6g0287151 RchiOBHm_Chr6g0287171 RchiOBHm_Chr6g0311671 RchiOBHm_Chr7g0213681 RchiOBHm_Chr7g0213751 RchiOBHm_Chr7g0213791 RchiOBHm_Chr7g0213801 RchiOBHm_Chr7g0221461 RchiOBHm_Chr7g0221481 RchiOBHm_Chr7g0221491 RchiOBHm_Chr7g0221501 RchiOBHm_Chr7g0221511 RchiOBHm_Chr7g0233271 RchiOBHm_Chr7g0238311 RchiOBHm_Chr7g0239091 RchiOBHm_Chr7g0239121 RchiOBHm_Chr7g0239131 RchiOBHm_Chr7g0239151 RchiOBHm_Chr7g0239161 RchiOBHm_Chr7g0239171 RchiOBHm_Chr7g0239211 RchiOBHm_Chr7g0239221 RchiOBHm_Chr7g0239231 RchiOBHm_Chr7g0239251 RchiOBHm_Chr7g0239641 RchiOBHm_Chr7g0239661 RchiOBHm_Chr7g0239771 RchiOBHm_Chr7g0239791
rosa_laevigata RLG00000000731 RLG00000000733 RLG00000000736 RLG00000000743 RLG00000000744 RLG00000000767 RLG00000000768 RLG00000000769 RLG00000000771 RLG00000000772 RLG00000000773 RLG00000000774 RLG00000000776 RLG00000000777 RLG00000000778 RLG00000000779 RLG00000000780 RLG00000000781 RLG00000000783 RLG00000000920 RLG00000000922 RLG00000000926 RLG00000000930 RLG00000001280 RLG00000001281 RLG00000002778 RLG00000002783 RLG00000002784 RLG00000002789 RLG00000002791 RLG00000002793 RLG00000006009 RLG00000008276 RLG00000008277 RLG00000008513 RLG00000008514 RLG00000008516 RLG00000008517 RLG00000008518 RLG00000008519 RLG00000012519 RLG00000012520 RLG00000012521 RLG00000012523 RLG00000012525 RLG00000012530 RLG00000013262 RLG00000013263 RLG00000013859 RLG00000013861 RLG00000014074 RLG00000018176 RLG00000019276 RLG00000020539 RLG00000020542 RLG00000022691 RLG00000029077 RLG00000029178 RLG00000029180 RLG00000029181 RLG00000032621 RLG00000032622 RLG00000032723 RLG00000032731 RLG00000032753 RLG00000032783 RLG00000032784 RLG00000032786 RLG00000033018 RLG00000033277 RLG00000033342 RLG00000033343 RLG00000034125 RLG00000036163 RLG00000036167 RLG00000036168
rosa_multiflora Rmu_co8056540.1_g000001 Rmu_co8091752.1_g000001 Rmu_co8279983.1_g000001 Rmu_co8282085.1_g000001 Rmu_co8310275.1_g000001 Rmu_co8364577.1_g000001 Rmu_co8381009.1_g000001 Rmu_co8432097.1_g000001 Rmu_sc0000063.1_g000009 Rmu_sc0000063.1_g000013 Rmu_sc0000063.1_g000016 Rmu_sc0000063.1_g000035 Rmu_sc0000063.1_g000036 Rmu_sc0000063.1_g000041 Rmu_sc0000063.1_g000045 Rmu_sc0000101.1_g000007 Rmu_sc0000101.1_g000010 Rmu_sc0000101.1_g000012 Rmu_sc0000101.1_g000016 Rmu_sc0000101.1_g000018 Rmu_sc0000101.1_g000021 Rmu_sc0000328.1_g000017 Rmu_sc0000721.1_g000009 Rmu_sc0000721.1_g000018 Rmu_sc0000977.1_g000012 Rmu_sc0000987.1_g000005 Rmu_sc0000987.1_g000006 Rmu_sc0000987.1_g000007 Rmu_sc0000987.1_g000019 Rmu_sc0001102.1_g000004 Rmu_sc0001175.1_g000005 Rmu_sc0001175.1_g000006 Rmu_sc0001371.1_g000018 Rmu_sc0002298.1_g000006 Rmu_sc0002298.1_g000016 Rmu_sc0002344.1_g000016 Rmu_sc0002516.1_g000002 Rmu_sc0002516.1_g000006 Rmu_sc0002520.1_g000004 Rmu_sc0002942.1_g000023 Rmu_sc0002942.1_g000045 Rmu_sc0002944.1_g000005 Rmu_sc0002944.1_g000006 Rmu_sc0002944.1_g000008 Rmu_sc0002973.1_g000004 Rmu_sc0003006.1_g000017 Rmu_sc0003207.1_g000002 Rmu_sc0003207.1_g000006 Rmu_sc0003207.1_g000021 Rmu_sc0003207.1_g000027 Rmu_sc0003207.1_g000028 Rmu_sc0003207.1_g000029 Rmu_sc0003207.1_g000033 Rmu_sc0003207.1_g000034 Rmu_sc0003314.1_g000037 Rmu_sc0003314.1_g000038 Rmu_sc0003314.1_g000044 Rmu_sc0003500.1_g000046 Rmu_sc0003622.1_g000006 Rmu_sc0003895.1_g000027 Rmu_sc0004175.1_g000002 Rmu_sc0004549.1_g000010 Rmu_sc0004549.1_g000011 Rmu_sc0004605.1_g000003 Rmu_sc0004605.1_g000005 Rmu_sc0004605.1_g000018 Rmu_sc0005102.1_g000002 Rmu_sc0005297.1_g000008 Rmu_sc0005297.1_g000020 Rmu_sc0005494.1_g000004 Rmu_sc0005494.1_g000005 Rmu_sc0005571.1_g000023 Rmu_sc0005837.1_g000008 Rmu_sc0005837.1_g000009 Rmu_sc0005913.1_g000016 Rmu_sc0005913.1_g000023 Rmu_sc0005970.1_g000007 Rmu_sc0005970.1_g000008 Rmu_sc0005979.1_g000009 Rmu_sc0005979.1_g000010 Rmu_sc0005979.1_g000013 Rmu_sc0005979.1_g000022 Rmu_sc0005979.1_g000023 Rmu_sc0005979.1_g000029 Rmu_sc0006380.1_g000005 Rmu_sc0006413.1_g000017 Rmu_sc0006522.1_g000001 Rmu_sc0006522.1_g000012 Rmu_sc0006522.1_g000024 Rmu_sc0006522.1_g000026 Rmu_sc0006624.1_g000004 Rmu_sc0006695.1_g000084 Rmu_sc0006847.1_g000020 Rmu_sc0007340.1_g000001 Rmu_sc0007340.1_g000002 Rmu_sc0007340.1_g000005 Rmu_sc0007802.1_g000021 Rmu_sc0007937.1_g000001 Rmu_sc0007959.1_g000001 Rmu_sc0008101.1_g000016 Rmu_sc0008314.1_g000008 Rmu_sc0008554.1_g000003 Rmu_sc0009418.1_g000006 Rmu_sc0012344.1_g000011 Rmu_sc0012454.1_g000001 Rmu_sc0014162.1_g000019 Rmu_sc0014703.1_g000001 Rmu_sc0016863.1_g000001 Rmu_sc0019500.1_g000002 Rmu_sc0019500.1_g000003 Rmu_sc0022062.1_g000001 Rmu_sc0023638.1_g000002 Rmu_sc0023638.1_g000003 Rmu_sc0023645.1_g000001 Rmu_sc0030525.1_g000001 Rmu_sc0033158.1_g000001 Rmu_sc0033302.1_g000001 Rmu_sc0035631.1_g000001 Rmu_sc0040354.1_g000001 Rmu_sc0040355.1_g000001 Rmu_sc0041511.1_g000001 Rmu_sc0042599.1_g000002 Rmu_ssc0000204.1_g000059 Rmu_ssc0000261.1_g000001 Rmu_ssc0000261.1_g000002 Rmu_ssc0000261.1_g000006
rosa_roxburghii Rroxscaffold_1G00010300 Rroxscaffold_1G00054930 Rroxscaffold_1G00055750 Rroxscaffold_1G00056040 Rroxscaffold_1G00057030 Rroxscaffold_2G00096550 Rroxscaffold_2G00096670 Rroxscaffold_3G00221110 Rroxscaffold_3G00221130 Rroxscaffold_3G00221230 Rroxscaffold_3G00221240 Rroxscaffold_3G00221260 Rroxscaffold_3G00223130 Rroxscaffold_3G00245700 Rroxscaffold_3G00275530 Rroxscaffold_5G00354370 Rroxscaffold_5G00354380 Rroxscaffold_5G00354410 Rroxscaffold_7G00181690 Rroxscaffold_7G00181700 Rroxscaffold_7G00181740 Rroxscaffold_7G00181770 Rroxscaffold_7G00181860
rosa_rugosa Rorug01G0355500 Rorug02G0425400 Rorug03G0204400 Rorug03G0211300 Rorug03G0259200 Rorug04G0080200 Rorug04G0097500 Rorug04G0097500 Rorug04G0097900 Rorug04G0098000 Rorug04G0099200 Rorug04G0099300 Rorug05G0067900 Rorug05G0067900 Rorug05G0068200 Rorug05G0068400 Rorug05G0068600 Rorug05G0068700 Rorug05G0080500 Rorug05G0082700 Rorug05G0082800 Rorug05G0098600 Rorug05G0098600 Rorug05G0098700 Rorug05G0137400 Rorug05G0137500 Rorug05G0137600 Rorug06G0185200 Rorug06G0185200 Rorug06G0185400 Rorug06G0185400 Rorug06G0185600 Rorug06G0185700 Rorug06G0185700 Rorug07G0144000 Rorug07G0144100 Rorug07G0144300 Rorug07G0144400 Rorug07G0144600 Rorug07G0144600 Rorug07G0279700 Rorug07G0311200 Rorug07G0325900 Rorug07G0326000 Rorug07G0326000 Rorug07G0326000 Rorug07G0326100 Rorug07G0326500.1 Rorug07G0326700 Rorug07G0326800 Rorug07G0326900 Rorug07G0326900 Rorug07G0327100 Rorug07G0327100 Rorug07G0327100 Rorug07G0328700 Rorug07G0328800 Rorug07G0329100 Rorug07G0329200 Rorug07G0329300
rosa_samantha Rh1DG123500 Rh2AG486000 Rh2AG486200 Rh2AG486400 Rh2AG486500 Rh2BG498700 Rh3AG298100 Rh3AG298200 Rh4DG153100 Rh4DG399800 Rh5DG168400 Rh5DG172600 Rh6AG297000 Rh6AG297100 Rh6BG301500 Rh6BG301600 Rh6BG301700 Rh6BG302200 Rh6CG042300 Rh7CG497700 Rh7CG497800 Rh7DG424000 Rh7DG465300 Rh7DG465400 Rh7DG465500 Rh7DG465600 Rh7DG465900 Rh7DG466100 Rh7DG466200 Rh7DG466300 Rh7DG468400 Rh7DG468900 Rh7DG469100 Rh7DG469300
rosa_wichuraiana Rw0G000510 Rw0G004040 Rw0G014250 Rw0G015580 Rw2G039810 Rw2G040200 Rw2G040260 Rw3G022850 Rw3G026300 Rw4G004980 Rw4G009400 Rw4G013080 Rw4G033940 Rw5G015020 Rw5G015150 Rw5G015230 Rw5G015470 Rw5G017590 Rw5G020220 Rw5G020970 Rw5G043210 Rw6G012640 Rw6G012790 Rw6G025560 Rw6G025620 Rw6G025660 Rw6G025670 Rw7G023900 Rw7G035820 Rw7G038650 Rw7G038660 Rw7G038770 Rw7G040030 Rw7G040040 Rw7G040050 Rw7G040060 Rw7G040070 Rw7G040080 Rw7G040150 Rw7G040160 Rw7G040170 Rw7G040190 Rw7G040200 Rw7G040210 Rw7G040410 Rw7G040460 Rw7G040510 Rw7G040530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1023
AasI GACNNNNNNGTC 1 cut(s) 1595
AccB1I GGYRCC 2 cut(s) 1063, 1806
AccB7I CCANNNNNTGG 1 cut(s) 1903
AccI GTMKAC 2 cut(s) 322, 1969
AccII CGCG 1 cut(s) 1978
AciI CCGC 4 cut(s) 33, 1152, 1340, 1910
AclWI GGATC 1 cut(s) 250
AcoI YGGCCR 2 cut(s) 460, 481
AcsI RAATTY 4 cut(s) 393, 404, 465, 1147
AcuI CTGAAG 3 cut(s) 482, 860, 917
AfiI CCNNNNNNNGG 4 cut(s) 562, 634, 1199, 1903
AflIII ACRYGT 2 cut(s) 990, 1976
AgsI TTSAA 5 cut(s) 292, 772, 847, 1264, 1481
AhdI GACNNNNNGTC 1 cut(s) 109
AjnI CCWGG 5 cut(s) 347, 726, 1455, 1655, 1810
Alw21I GWGCWC 3 cut(s) 570, 642, 1584
Alw26I GTCTC 6 cut(s) 211, 447, 622, 868, 1259, 1640
Alw44I GTGCAC 1 cut(s) 1580
AlwI GGATC 1 cut(s) 250
AlwNI CAGNNNCTG 1 cut(s) 165
AoxI GGCC 8 cut(s) 460, 481, 553, 625, 1036, 1432, 1956, 1962
ApaLI GTGCAC 1 cut(s) 1580
ApeKI GCWGC 2 cut(s) 25, 937
ApoI RAATTY 4 cut(s) 393, 404, 465, 1147
AseI ATTAAT 1 cut(s) 1208
AspA2I CCTAGG 1 cut(s) 313
AspLEI GCGC 1 cut(s) 1786
AspS9I GGNCC 1 cut(s) 141
AsuHPI GGTGA 4 cut(s) 111, 139, 274, 1960
AvaII GGWCC 1 cut(s) 141
AvrII CCTAGG 1 cut(s) 313
BaeGI GKGCMC 2 cut(s) 1066, 1584
BalI TGGCCA 2 cut(s) 462, 483
BanI GGYRCC 2 cut(s) 1063, 1806
BanII GRGCYC 2 cut(s) 570, 642
BbsI GAAGAC 2 cut(s) 105, 835
Bbv12I GWGCWC 3 cut(s) 570, 642, 1584
BbvI GCAGC 2 cut(s) 12, 924
BccI CCATC 3 cut(s) 406, 966, 1792
BciT130I CCWGG 5 cut(s) 349, 728, 1457, 1657, 1812
BclI TGATCA 2 cut(s) 45, 385
BcoDI GTCTC 6 cut(s) 211, 447, 622, 868, 1259, 1640
BfaI CTAG 5 cut(s) 314, 914, 1118, 1509, 1823
BfmI CTRYAG 3 cut(s) 549, 621, 1356
BfoI RGCGCY 1 cut(s) 1787
BisI GCNGC 3 cut(s) 26, 938, 1910
BlnI CCTAGG 1 cut(s) 313
BlsI GCNGC 3 cut(s) 27, 939, 1911
BmcAI AGTACT 2 cut(s) 1379, 1669
Bme1390I CCNGG 5 cut(s) 349, 728, 1457, 1657, 1812
Bme18I GGWCC 1 cut(s) 141
BmeRI GACNNNNNGTC 1 cut(s) 109
BmgT120I GGNCC 1 cut(s) 141
BmiI GGNNCC 4 cut(s) 143, 1065, 1808, 1908
BmrFI CCNGG 5 cut(s) 349, 728, 1457, 1657, 1812
BpiI GAAGAC 2 cut(s) 105, 835
BpmI CTGGAG 3 cut(s) 331, 554, 626
BpuEI CTTGAG 1 cut(s) 1634
BsaBI GATNNNNATC 1 cut(s) 807
BsaI GGTCTC 2 cut(s) 211, 868
BsaJI CCNNGG 5 cut(s) 313, 1456, 1810, 1811, 1959
BsaXI ACNNNNNCTCC 4 cut(s) 557, 587, 629, 659
Bsc4I CCNNNNNNNGG 4 cut(s) 562, 634, 1199, 1903
Bse1I ACTGG 8 cut(s) 113, 176, 571, 643, 823, 1039, 1251, 1688
Bse8I GATNNNNATC 1 cut(s) 807
BseBI CCWGG 5 cut(s) 349, 728, 1457, 1657, 1812
BseDI CCNNGG 5 cut(s) 313, 1456, 1810, 1811, 1959
BseGI GGATG 1 cut(s) 1676
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 4 cut(s) 562, 634, 1199, 1903
BseMII CTCAG 7 cut(s) 574, 646, 681, 904, 920, 941, 1653
BseNI ACTGG 8 cut(s) 113, 176, 571, 643, 823, 1039, 1251, 1688
BseSI GKGCMC 2 cut(s) 1066, 1584
BseXI GCAGC 2 cut(s) 12, 924
BseYI CCCAGC 1 cut(s) 1830
Bsh1236I CGCG 1 cut(s) 1978
BshFI GGCC 8 cut(s) 462, 483, 555, 627, 1038, 1434, 1958, 1964
BshNI GGYRCC 2 cut(s) 1063, 1806
BsiHKAI GWGCWC 3 cut(s) 570, 642, 1584
BslFI GGGAC 5 cut(s) 127, 235, 1402, 1813, 1874
BslI CCNNNNNNNGG 4 cut(s) 562, 634, 1199, 1903
BsmAI GTCTC 6 cut(s) 211, 447, 622, 868, 1259, 1640
BsmBI CGTCTC 1 cut(s) 1640
BsmFI GGGAC 5 cut(s) 127, 235, 1402, 1813, 1874
BsmI GAATGC 1 cut(s) 35
BsnI GGCC 8 cut(s) 462, 483, 555, 627, 1038, 1434, 1958, 1964
Bso31I GGTCTC 2 cut(s) 211, 868
Bsp1286I GDGCHC 4 cut(s) 570, 642, 1066, 1584
Bsp1407I TGTACA 3 cut(s) 231, 704, 1108
Bsp143I GATC 6 cut(s) 45, 242, 385, 508, 580, 652
BspACI CCGC 4 cut(s) 33, 1152, 1340, 1910
BspANI GGCC 8 cut(s) 462, 483, 555, 627, 1038, 1434, 1958, 1964
BspCNI CTCAG 7 cut(s) 573, 645, 682, 903, 919, 940, 1652
BspFNI CGCG 1 cut(s) 1978
BspHI TCATGA 2 cut(s) 1369, 1794
BspLI GGNNCC 4 cut(s) 143, 1065, 1808, 1908
BspPI GGATC 1 cut(s) 250
BspT107I GGYRCC 2 cut(s) 1063, 1806
BspTNI GGTCTC 2 cut(s) 211, 868
BsrGI TGTACA 3 cut(s) 231, 704, 1108
BsrI ACTGG 8 cut(s) 113, 176, 571, 643, 823, 1039, 1251, 1688
BssECI CCNNGG 5 cut(s) 313, 1456, 1810, 1811, 1959
BssMI GATC 6 cut(s) 45, 242, 385, 508, 580, 652
BssNAI GTATAC 2 cut(s) 323, 1970
BssT1I CCWWGG 2 cut(s) 313, 1959
Bst1107I GTATAC 2 cut(s) 323, 1970
Bst2UI CCWGG 5 cut(s) 349, 728, 1457, 1657, 1812
Bst4CI ACNGT 6 cut(s) 205, 249, 327, 1124, 1586, 1597
Bst6I CTCTTC 4 cut(s) 538, 610, 682, 1005
BstAUI TGTACA 3 cut(s) 231, 704, 1108
BstC8I GCNNGC 2 cut(s) 416, 1728
BstDEI CTNAG 8 cut(s) 488, 560, 632, 690, 890, 906, 927, 1639
BstF5I GGATG 1 cut(s) 1676
BstFNI CGCG 1 cut(s) 1978
BstH2I RGCGCY 1 cut(s) 1787
BstHHI GCGC 1 cut(s) 1786
BstKTI GATC 6 cut(s) 48, 245, 388, 511, 583, 655
BstMAI GTCTC 6 cut(s) 211, 447, 622, 868, 1259, 1640
BstMBI GATC 6 cut(s) 45, 242, 385, 508, 580, 652
BstMWI GCNNNNNNNGC 2 cut(s) 25, 937
BstNI CCWGG 5 cut(s) 349, 728, 1457, 1657, 1812
BstNSI RCATGY 1 cut(s) 418
BstSCI CCNGG 5 cut(s) 347, 726, 1455, 1655, 1810
BstSFI CTRYAG 3 cut(s) 549, 621, 1356
BstSLI GKGCMC 2 cut(s) 1066, 1584
BstUI CGCG 1 cut(s) 1978
BstV1I GCAGC 2 cut(s) 12, 924
BstV2I GAAGAC 2 cut(s) 105, 835
BstZ17I GTATAC 2 cut(s) 323, 1970
BsuRI GGCC 8 cut(s) 462, 483, 555, 627, 1038, 1434, 1958, 1964
BtsCI GGATG 1 cut(s) 1676
BtsI GCAGTG 1 cut(s) 1941
BtsIMutI CAGTG 4 cut(s) 41, 245, 898, 1941
Cac8I GCNNGC 2 cut(s) 416, 1728
CaiI CAGNNNCTG 1 cut(s) 165
CciI TCATGA 2 cut(s) 1369, 1794
CfoI GCGC 1 cut(s) 1786
Cfr13I GGNCC 1 cut(s) 141
CseI GACGC 2 cut(s) 1967, 1974
CspCI CAANNNNNGTGG 2 cut(s) 1917, 1952
CviAII CATG 6 cut(s) 138, 415, 1370, 1538, 1559, 1795
DdeI CTNAG 8 cut(s) 488, 560, 632, 690, 890, 906, 927, 1639
DpnI GATC 6 cut(s) 47, 244, 387, 510, 582, 654
DpnII GATC 6 cut(s) 45, 242, 385, 508, 580, 652
DrdI GACNNNNNNGTC 1 cut(s) 1595
DriI GACNNNNNGTC 1 cut(s) 109
DseDI GACNNNNNNGTC 1 cut(s) 1595
EaeI YGGCCR 2 cut(s) 460, 481
Eam1104I CTCTTC 4 cut(s) 538, 610, 682, 1005
Eam1105I GACNNNNNGTC 1 cut(s) 109
EarI CTCTTC 4 cut(s) 538, 610, 682, 1005
Ecl136II GAGCTC 2 cut(s) 568, 640
Eco130I CCWWGG 2 cut(s) 313, 1959
Eco24I GRGCYC 2 cut(s) 570, 642
Eco31I GGTCTC 2 cut(s) 211, 868
Eco47I GGWCC 1 cut(s) 141
Eco53kI GAGCTC 2 cut(s) 568, 640
Eco57I CTGAAG 3 cut(s) 482, 860, 917
EcoICRI GAGCTC 2 cut(s) 568, 640
EcoRII CCWGG 5 cut(s) 347, 726, 1455, 1655, 1810
EcoT14I CCWWGG 2 cut(s) 313, 1959
EcoT38I GRGCYC 2 cut(s) 570, 642
ErhI CCWWGG 2 cut(s) 313, 1959
Esp3I CGTCTC 1 cut(s) 1640
FaeI CATG 6 cut(s) 141, 418, 1373, 1541, 1562, 1798
FaqI GGGAC 5 cut(s) 127, 235, 1402, 1813, 1874
FatI CATG 6 cut(s) 137, 414, 1369, 1537, 1558, 1794
FbaI TGATCA 2 cut(s) 45, 385
FblI GTMKAC 2 cut(s) 322, 1969
Fnu4HI GCNGC 3 cut(s) 26, 938, 1910
FokI GGATG 1 cut(s) 1663
FriOI GRGCYC 2 cut(s) 570, 642
Fsp4HI GCNGC 3 cut(s) 26, 938, 1910
FspBI CTAG 5 cut(s) 314, 914, 1118, 1509, 1823
GlaI GCGC 1 cut(s) 1785
GluI GCNGC 3 cut(s) 26, 938, 1910
GsaI CCCAGC 1 cut(s) 1834
GsuI CTGGAG 3 cut(s) 331, 554, 626
HaeII RGCGCY 1 cut(s) 1787
HaeIII GGCC 8 cut(s) 462, 483, 555, 627, 1038, 1434, 1958, 1964
HgaI GACGC 2 cut(s) 1967, 1974
HhaI GCGC 1 cut(s) 1786
Hin1II CATG 6 cut(s) 141, 418, 1373, 1541, 1562, 1798
Hin6I GCGC 1 cut(s) 1784
HinP1I GCGC 1 cut(s) 1784
HincII GTYRAC 3 cut(s) 988, 1273, 2067
HindII GTYRAC 3 cut(s) 988, 1273, 2067
HindIII AAGCTT 1 cut(s) 494
HphI GGTGA 4 cut(s) 111, 139, 274, 1960
Hpy166II GTNNAC 8 cut(s) 323, 988, 1273, 1332, 1411, 1582, 1970, 2067
Hpy188I TCNGA 8 cut(s) 242, 403, 691, 777, 909, 1282, 1642, 1649
Hpy188III TCNNGA 6 cut(s) 1004, 1370, 1795, 1879, 1989, 2048
Hpy8I GTNNAC 8 cut(s) 323, 988, 1273, 1332, 1411, 1582, 1970, 2067
HpyCH4III ACNGT 6 cut(s) 205, 249, 327, 1124, 1586, 1597
HpyCH4IV ACGT 3 cut(s) 428, 990, 1334
HpyF10VI GCNNNNNNNGC 2 cut(s) 25, 937
HpyF3I CTNAG 8 cut(s) 488, 560, 632, 690, 890, 906, 927, 1639
HpySE526I ACGT 3 cut(s) 428, 990, 1334
Hsp92II CATG 6 cut(s) 141, 418, 1373, 1541, 1562, 1798
HspAI GCGC 1 cut(s) 1784
Ksp22I TGATCA 2 cut(s) 45, 385
Kzo9I GATC 6 cut(s) 45, 242, 385, 508, 580, 652
LmnI GCTCC 8 cut(s) 24, 194, 565, 573, 637, 645, 1881, 1906
Lsp1109I GCAGC 2 cut(s) 12, 924
MaeI CTAG 5 cut(s) 314, 914, 1118, 1509, 1823
MaeII ACGT 3 cut(s) 428, 990, 1334
MaeIII GTNAC 5 cut(s) 948, 1213, 1586, 1744, 1948
MalI GATC 6 cut(s) 47, 244, 387, 510, 582, 654
MboI GATC 6 cut(s) 45, 242, 385, 508, 580, 652
MboII GAAGA 6 cut(s) 105, 525, 597, 669, 835, 992
MfeI CAATTG 3 cut(s) 847, 1218, 1575
MhlI GDGCHC 4 cut(s) 570, 642, 1066, 1584
MlsI TGGCCA 2 cut(s) 462, 483
MluI ACGCGT 1 cut(s) 1976
MluNI TGGCCA 2 cut(s) 462, 483
MlyI GAGTC 5 cut(s) 1310, 1521, 1625, 1752, 1835
MmeI TCCRAC 3 cut(s) 494, 1704, 1884
Mox20I TGGCCA 2 cut(s) 462, 483
MscI TGGCCA 2 cut(s) 462, 483
MseI TTAA 5 cut(s) 527, 599, 671, 1208, 1488
Msp20I TGGCCA 2 cut(s) 462, 483
MspA1I CMGCKG 1 cut(s) 937
MspR9I CCNGG 5 cut(s) 349, 728, 1457, 1657, 1812
MunI CAATTG 3 cut(s) 847, 1218, 1575
Mva1269I GAATGC 1 cut(s) 35
MvaI CCWGG 5 cut(s) 349, 728, 1457, 1657, 1812
MvnI CGCG 1 cut(s) 1978
MwoI GCNNNNNNNGC 2 cut(s) 25, 937
NdeII GATC 6 cut(s) 45, 242, 385, 508, 580, 652
NlaIII CATG 6 cut(s) 141, 418, 1373, 1541, 1562, 1798
NlaIV GGNNCC 4 cut(s) 143, 1065, 1808, 1908
NmeAIII GCCGAG 1 cut(s) 2003
NmuCI GTSAC 4 cut(s) 948, 1586, 1744, 1948
NspI RCATGY 1 cut(s) 418
PaeI GCATGC 1 cut(s) 418
PagI TCATGA 2 cut(s) 1369, 1794
PasI CCCWGGG 1 cut(s) 1811
PcsI WCGNNNNNNNCGW 1 cut(s) 1982
PctI GAATGC 1 cut(s) 35
PfeI GAWTC 6 cut(s) 83, 901, 910, 1673, 1841, 1922
PflMI CCANNNNNTGG 1 cut(s) 1903
PkrI GCNGC 3 cut(s) 27, 939, 1911
PleI GAGTC 5 cut(s) 1309, 1520, 1624, 1751, 1834
PpsI GAGTC 5 cut(s) 1309, 1520, 1624, 1751, 1834
PshBI ATTAAT 1 cut(s) 1208
PsiI TTATAA 1 cut(s) 1023
Psp124BI GAGCTC 2 cut(s) 570, 642
Psp6I CCWGG 5 cut(s) 347, 726, 1455, 1655, 1810
PspFI CCCAGC 1 cut(s) 1830
PspGI CCWGG 5 cut(s) 347, 726, 1455, 1655, 1810
PspN4I GGNNCC 4 cut(s) 143, 1065, 1808, 1908
PspPI GGNCC 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 165
PvuII CAGCTG 1 cut(s) 937
SacI GAGCTC 2 cut(s) 570, 642
SaqAI TTAA 5 cut(s) 527, 599, 671, 1208, 1488
SatI GCNGC 3 cut(s) 26, 938, 1910
Sau3AI GATC 6 cut(s) 45, 242, 385, 508, 580, 652
Sau96I GGNCC 1 cut(s) 141
ScaI AGTACT 2 cut(s) 1379, 1669
SchI GAGTC 5 cut(s) 1310, 1521, 1625, 1752, 1835
ScrFI CCNGG 5 cut(s) 349, 728, 1457, 1657, 1812
SduI GDGCHC 4 cut(s) 570, 642, 1066, 1584
SfcI CTRYAG 3 cut(s) 549, 621, 1356
SinI GGWCC 1 cut(s) 141
SmlI CTYRAG 1 cut(s) 1613
SmoI CTYRAG 1 cut(s) 1613
SphI GCATGC 1 cut(s) 418
SsiI CCGC 4 cut(s) 33, 1152, 1340, 1910
SspMI CTAG 5 cut(s) 314, 914, 1118, 1509, 1823
SstI GAGCTC 2 cut(s) 570, 642
StyD4I CCNGG 5 cut(s) 347, 726, 1455, 1655, 1810
StyI CCWWGG 2 cut(s) 313, 1959
TaaI ACNGT 6 cut(s) 205, 249, 327, 1124, 1586, 1597
TaiI ACGT 3 cut(s) 431, 993, 1337
TaqI TCGA 7 cut(s) 258, 435, 476, 789, 942, 1626, 1788
TatI WGTACW 5 cut(s) 231, 704, 1108, 1377, 1667
TauI GCSGC 1 cut(s) 1912
TfiI GAWTC 6 cut(s) 83, 901, 910, 1673, 1841, 1922
Tru1I TTAA 5 cut(s) 527, 599, 671, 1208, 1488
Tru9I TTAA 5 cut(s) 527, 599, 671, 1208, 1488
TscAI CASTG 4 cut(s) 48, 252, 898, 1941
TseFI GTSAC 4 cut(s) 948, 1586, 1744, 1948
TseI GCWGC 2 cut(s) 25, 937
Tsp45I GTSAC 4 cut(s) 948, 1586, 1744, 1948
TspGWI ACGGA 2 cut(s) 1229, 1763
TspRI CASTG 4 cut(s) 48, 252, 898, 1941
Van91I CCANNNNNTGG 1 cut(s) 1903
VneI GTGCAC 1 cut(s) 1580
VpaK11BI GGWCC 1 cut(s) 141
VspI ATTAAT 1 cut(s) 1208
XapI RAATTY 4 cut(s) 393, 404, 465, 1147
XceI RCATGY 1 cut(s) 418
XmaJI CCTAGG 1 cut(s) 313
XmiI GTMKAC 2 cut(s) 322, 1969
XspI CTAG 5 cut(s) 314, 914, 1118, 1509, 1823
ZrmI AGTACT 2 cut(s) 1379, 1669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.