XH domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 636 |
| AccBSI | CCGCTC | 1 cut(s) | 346 |
| AccI | GTMKAC | 2 cut(s) | 335, 641 |
| AciI | CCGC | 2 cut(s) | 346, 428 |
| AclWI | GGATC | 3 cut(s) | 63, 461, 474 |
| AcsI | RAATTY | 1 cut(s) | 300 |
| AcuI | CTGAAG | 1 cut(s) | 26 |
| AfaI | GTAC | 1 cut(s) | 210 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 345, 636 |
| AgsI | TTSAA | 4 cut(s) | 128, 305, 550, 616 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 671, 703 |
| AluBI | AGCT | 7 cut(s) | 52, 68, 82, 94, 124, 217, 655 |
| AluI | AGCT | 7 cut(s) | 52, 68, 82, 94, 124, 217, 655 |
| AlwI | GGATC | 3 cut(s) | 63, 461, 474 |
| ApoI | RAATTY | 1 cut(s) | 300 |
| AseI | ATTAAT | 2 cut(s) | 386, 528 |
| AsuHPI | GGTGA | 3 cut(s) | 262, 584, 604 |
| AsuII | TTCGAA | 1 cut(s) | 666 |
| BamHI | GGATCC | 1 cut(s) | 466 |
| BccI | CCATC | 3 cut(s) | 145, 286, 601 |
| BglII | AGATCT | 1 cut(s) | 37 |
| BmiI | GGNNCC | 1 cut(s) | 468 |
| BmrI | ACTGGG | 1 cut(s) | 578 |
| BmsI | GCATC | 3 cut(s) | 466, 487, 692 |
| BmuI | ACTGGG | 1 cut(s) | 578 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 10, 42 |
| BpmI | CTGGAG | 1 cut(s) | 233 |
| Bpu10I | CCTNAGC | 1 cut(s) | 651 |
| Bpu14I | TTCGAA | 1 cut(s) | 666 |
| BpuEI | CTTGAG | 3 cut(s) | 32, 116, 239 |
| BsaJI | CCNNGG | 1 cut(s) | 516 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 345, 636 |
| Bse1I | ACTGG | 3 cut(s) | 216, 573, 630 |
| BseDI | CCNNGG | 1 cut(s) | 516 |
| BseGI | GGATG | 3 cut(s) | 271, 301, 478 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 345, 636 |
| BseMII | CTCAG | 2 cut(s) | 83, 642 |
| BseNI | ACTGG | 3 cut(s) | 216, 573, 630 |
| BseRI | GAGGAG | 2 cut(s) | 364, 383 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 345, 636 |
| Bsp119I | TTCGAA | 1 cut(s) | 666 |
| Bsp143I | GATC | 3 cut(s) | 37, 55, 466 |
| BspACI | CCGC | 2 cut(s) | 346, 428 |
| BspCNI | CTCAG | 2 cut(s) | 82, 643 |
| BspLI | GGNNCC | 1 cut(s) | 468 |
| BspPI | GGATC | 3 cut(s) | 63, 461, 474 |
| BspT104I | TTCGAA | 1 cut(s) | 666 |
| BsrBI | CCGCTC | 1 cut(s) | 346 |
| BsrI | ACTGG | 3 cut(s) | 216, 573, 630 |
| BssECI | CCNNGG | 1 cut(s) | 516 |
| BssMI | GATC | 3 cut(s) | 37, 55, 466 |
| BssNAI | GTATAC | 2 cut(s) | 336, 642 |
| BssT1I | CCWWGG | 1 cut(s) | 516 |
| Bst1107I | GTATAC | 2 cut(s) | 336, 642 |
| Bst4CI | ACNGT | 2 cut(s) | 62, 160 |
| Bst6I | CTCTTC | 2 cut(s) | 324, 687 |
| BstBI | TTCGAA | 1 cut(s) | 666 |
| BstDEI | CTNAG | 4 cut(s) | 69, 461, 651, 731 |
| BstF5I | GGATG | 3 cut(s) | 271, 301, 478 |
| BstKTI | GATC | 3 cut(s) | 40, 58, 469 |
| BstMBI | GATC | 3 cut(s) | 37, 55, 466 |
| BstX2I | RGATCY | 2 cut(s) | 37, 466 |
| BstYI | RGATCY | 2 cut(s) | 37, 466 |
| BstZ17I | GTATAC | 2 cut(s) | 336, 642 |
| BtsCI | GGATG | 3 cut(s) | 271, 301, 478 |
| BtsIMutI | CAGTG | 2 cut(s) | 67, 637 |
| Csp6I | GTAC | 1 cut(s) | 209 |
| CviAII | CATG | 1 cut(s) | 260 |
| CviQI | GTAC | 1 cut(s) | 209 |
| DdeI | CTNAG | 4 cut(s) | 69, 461, 651, 731 |
| DpnI | GATC | 3 cut(s) | 39, 57, 468 |
| DpnII | GATC | 3 cut(s) | 37, 55, 466 |
| DraI | TTTAAA | 1 cut(s) | 558 |
| Eam1104I | CTCTTC | 2 cut(s) | 324, 687 |
| EarI | CTCTTC | 2 cut(s) | 324, 687 |
| Eco130I | CCWWGG | 1 cut(s) | 516 |
| Eco57I | CTGAAG | 1 cut(s) | 26 |
| EcoT14I | CCWWGG | 1 cut(s) | 516 |
| ErhI | CCWWGG | 1 cut(s) | 516 |
| FaeI | CATG | 1 cut(s) | 263 |
| FaiI | YATR | 9 cut(s) | 135, 261, 336, 405, 439, 583, 605, 624, 642 |
| FatI | CATG | 1 cut(s) | 259 |
| FblI | GTMKAC | 2 cut(s) | 335, 641 |
| FokI | GGATG | 3 cut(s) | 278, 308, 465 |
| GsuI | CTGGAG | 1 cut(s) | 233 |
| Hin1II | CATG | 1 cut(s) | 263 |
| HindIII | AAGCTT | 1 cut(s) | 92 |
| HinfI | GANTC | 1 cut(s) | 23 |
| HphI | GGTGA | 3 cut(s) | 262, 584, 604 |
| Hpy166II | GTNNAC | 2 cut(s) | 336, 642 |
| Hpy188I | TCNGA | 3 cut(s) | 45, 72, 87 |
| Hpy188III | TCNNGA | 2 cut(s) | 305, 487 |
| Hpy8I | GTNNAC | 2 cut(s) | 336, 642 |
| HpyAV | CCTTC | 7 cut(s) | 166, 418, 500, 544, 583, 665, 673 |
| HpyCH4III | ACNGT | 2 cut(s) | 62, 160 |
| HpyF3I | CTNAG | 4 cut(s) | 69, 461, 651, 731 |
| Hsp92II | CATG | 1 cut(s) | 263 |
| Kzo9I | GATC | 3 cut(s) | 37, 55, 466 |
| LmnI | GCTCC | 3 cut(s) | 163, 214, 454 |
| LpnPI | CCDG | 8 cut(s) | 38, 197, 311, 437, 472, 554, 643, 663 |
| LweI | GCATC | 3 cut(s) | 466, 487, 692 |
| MaeIII | GTNAC | 1 cut(s) | 592 |
| MalI | GATC | 3 cut(s) | 39, 57, 468 |
| MbiI | CCGCTC | 1 cut(s) | 346 |
| MboI | GATC | 3 cut(s) | 37, 55, 466 |
| MflI | RGATCY | 2 cut(s) | 37, 466 |
| MluCI | AATT | 5 cut(s) | 300, 383, 522, 545, 611 |
| MnlI | CCTC | 8 cut(s) | 230, 256, 262, 342, 361, 364, 669, 688 |
| MseI | TTAA | 5 cut(s) | 245, 314, 386, 528, 557 |
| MslI | CAYNNNNRTG | 1 cut(s) | 264 |
| NdeII | GATC | 3 cut(s) | 37, 55, 466 |
| NlaIII | CATG | 1 cut(s) | 263 |
| NlaIV | GGNNCC | 1 cut(s) | 468 |
| NmuCI | GTSAC | 1 cut(s) | 592 |
| NspV | TTCGAA | 1 cut(s) | 666 |
| PfeI | GAWTC | 1 cut(s) | 23 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 636 |
| PshBI | ATTAAT | 2 cut(s) | 386, 528 |
| PspN4I | GGNNCC | 1 cut(s) | 468 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 192, 224 |
| PsuI | RGATCY | 2 cut(s) | 37, 466 |
| RsaI | GTAC | 1 cut(s) | 210 |
| RsaNI | GTAC | 1 cut(s) | 209 |
| RseI | CAYNNNNRTG | 1 cut(s) | 264 |
| SaqAI | TTAA | 5 cut(s) | 245, 314, 386, 528, 557 |
| Sau3AI | GATC | 3 cut(s) | 37, 55, 466 |
| SfaNI | GCATC | 3 cut(s) | 466, 487, 692 |
| SfuI | TTCGAA | 1 cut(s) | 666 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 264 |
| SmlI | CTYRAG | 3 cut(s) | 11, 95, 218 |
| SmoI | CTYRAG | 3 cut(s) | 11, 95, 218 |
| Sse9I | AATT | 5 cut(s) | 300, 383, 522, 545, 611 |
| SsiI | CCGC | 2 cut(s) | 346, 428 |
| SspI | AATATT | 1 cut(s) | 401 |
| StyI | CCWWGG | 1 cut(s) | 516 |
| TaaI | ACNGT | 2 cut(s) | 62, 160 |
| TaqI | TCGA | 1 cut(s) | 666 |
| TasI | AATT | 5 cut(s) | 300, 383, 522, 545, 611 |
| TfiI | GAWTC | 1 cut(s) | 23 |
| Tru1I | TTAA | 5 cut(s) | 245, 314, 386, 528, 557 |
| Tru9I | TTAA | 5 cut(s) | 245, 314, 386, 528, 557 |
| TscAI | CASTG | 2 cut(s) | 67, 637 |
| TseFI | GTSAC | 1 cut(s) | 592 |
| Tsp45I | GTSAC | 1 cut(s) | 592 |
| TspGWI | ACGGA | 1 cut(s) | 512 |
| TspRI | CASTG | 2 cut(s) | 67, 637 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 636 |
| VspI | ATTAAT | 2 cut(s) | 386, 528 |
| XapI | RAATTY | 1 cut(s) | 300 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 289 |
| XmiI | GTMKAC | 2 cut(s) | 335, 641 |