XH domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfeI | AGCGCT | 1 cut(s) | 225 |
| AgsI | TTSAA | 5 cut(s) | 54, 95, 110, 278, 283 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 34, 66, 95, 127 |
| AluBI | AGCT | 4 cut(s) | 91, 145, 166, 259 |
| AluI | AGCT | 4 cut(s) | 91, 145, 166, 259 |
| Alw21I | GWGCWC | 1 cut(s) | 153 |
| Aor51HI | AGCGCT | 1 cut(s) | 225 |
| AoxI | GGCC | 1 cut(s) | 327 |
| AseI | ATTAAT | 1 cut(s) | 18 |
| AspLEI | GCGC | 1 cut(s) | 226 |
| Bbv12I | GWGCWC | 1 cut(s) | 153 |
| BfaI | CTAG | 1 cut(s) | 331 |
| BfmI | CTRYAG | 1 cut(s) | 167 |
| BfoI | RGCGCY | 1 cut(s) | 227 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 305 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BpmI | CTGGAG | 1 cut(s) | 167 |
| BseMII | CTCAG | 1 cut(s) | 279 |
| BshFI | GGCC | 1 cut(s) | 329 |
| BsiHKAI | GWGCWC | 1 cut(s) | 153 |
| BsnI | GGCC | 1 cut(s) | 329 |
| Bsp1286I | GDGCHC | 1 cut(s) | 153 |
| BspANI | GGCC | 1 cut(s) | 329 |
| BspCNI | CTCAG | 1 cut(s) | 278 |
| BstC8I | GCNNGC | 1 cut(s) | 228 |
| BstDEI | CTNAG | 1 cut(s) | 265 |
| BstH2I | RGCGCY | 1 cut(s) | 227 |
| BstHHI | GCGC | 1 cut(s) | 226 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 305 |
| BstSFI | CTRYAG | 1 cut(s) | 167 |
| BsuRI | GGCC | 1 cut(s) | 329 |
| BtsI | GCAGTG | 2 cut(s) | 151, 315 |
| BtsIMutI | CAGTG | 2 cut(s) | 151, 315 |
| Cac8I | GCNNGC | 1 cut(s) | 228 |
| CfoI | GCGC | 1 cut(s) | 226 |
| CviJI | RGCY | 6 cut(s) | 91, 145, 166, 259, 299, 329 |
| CviKI_1 | RGCY | 6 cut(s) | 91, 145, 166, 259, 299, 329 |
| DdeI | CTNAG | 1 cut(s) | 265 |
| Eco147I | AGGCCT | 1 cut(s) | 329 |
| Eco47III | AGCGCT | 1 cut(s) | 225 |
| FaiI | YATR | 5 cut(s) | 27, 70, 131, 174, 176 |
| FauNDI | CATATG | 1 cut(s) | 174 |
| FspBI | CTAG | 1 cut(s) | 331 |
| GlaI | GCGC | 1 cut(s) | 225 |
| GsuI | CTGGAG | 1 cut(s) | 167 |
| HaeII | RGCGCY | 1 cut(s) | 227 |
| HaeIII | GGCC | 1 cut(s) | 329 |
| HhaI | GCGC | 1 cut(s) | 226 |
| Hin6I | GCGC | 1 cut(s) | 224 |
| HinP1I | GCGC | 1 cut(s) | 224 |
| HindIII | AAGCTT | 1 cut(s) | 257 |
| HinfI | GANTC | 2 cut(s) | 118, 191 |
| Hpy188I | TCNGA | 4 cut(s) | 123, 196, 219, 268 |
| HpyAV | CCTTC | 2 cut(s) | 47, 199 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 305 |
| HpyF3I | CTNAG | 1 cut(s) | 265 |
| HspAI | GCGC | 1 cut(s) | 224 |
| LmnI | GCTCC | 2 cut(s) | 148, 163 |
| LpnPI | CCDG | 4 cut(s) | 131, 212, 290, 302 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeI | CTAG | 1 cut(s) | 331 |
| MboII | GAAGA | 1 cut(s) | 214 |
| MhlI | GDGCHC | 1 cut(s) | 153 |
| MluCI | AATT | 5 cut(s) | 15, 42, 110, 273, 278 |
| MnlI | CCTC | 2 cut(s) | 310, 319 |
| MseI | TTAA | 2 cut(s) | 14, 18 |
| MslI | CAYNNNNRTG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 305 |
| NdeI | CATATG | 1 cut(s) | 174 |
| PacI | TTAATTAA | 1 cut(s) | 18 |
| PceI | AGGCCT | 1 cut(s) | 329 |
| PfeI | GAWTC | 2 cut(s) | 118, 191 |
| PshBI | ATTAAT | 1 cut(s) | 18 |
| RseI | CAYNNNNRTG | 1 cut(s) | 177 |
| SaqAI | TTAA | 2 cut(s) | 14, 18 |
| SduI | GDGCHC | 1 cut(s) | 153 |
| SetI | ASST | 5 cut(s) | 39, 93, 147, 168, 261 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| SfcI | CTRYAG | 1 cut(s) | 167 |
| SgeI | CNNG | 6 cut(s) | 158, 172, 239, 301, 308, 317 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 177 |
| Sse9I | AATT | 5 cut(s) | 15, 42, 110, 273, 278 |
| SseBI | AGGCCT | 1 cut(s) | 329 |
| SspI | AATATT | 1 cut(s) | 61 |
| SspMI | CTAG | 1 cut(s) | 331 |
| StuI | AGGCCT | 1 cut(s) | 329 |
| TasI | AATT | 5 cut(s) | 15, 42, 110, 273, 278 |
| TfiI | GAWTC | 2 cut(s) | 118, 191 |
| Tru1I | TTAA | 2 cut(s) | 14, 18 |
| Tru9I | TTAA | 2 cut(s) | 14, 18 |
| TscAI | CASTG | 2 cut(s) | 158, 315 |
| TspDTI | ATGAA | 2 cut(s) | 146, 191 |
| TspRI | CASTG | 2 cut(s) | 158, 315 |
| VspI | ATTAAT | 1 cut(s) | 18 |
| XspI | CTAG | 1 cut(s) | 331 |