Rorug01G0464100

XH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000340
Physical Location & Seq
Forward (+)
55661308 .. 55666037
4730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0464100.1

Sequence Viewer

Length: 1515 bp
ATGGAGAACACAAGCAGCTTGCTACTGAACTTTGAGGCAGAGATGGAAGTTCAGCAACCAAGTCTAAGCCCGGCAGCGCGTCTGTTTCACTCACCAAAGTTCAGCTGCTATATTGTCATAAGAATGGGGTGCAGCATCAGGATCAATCCTGAAGTAATCAGCGCCGGCTTGAAGGAAACCTTGTATAAGCATCCTCGCTTCTCTAGCAAAATGGTGAAGGATAGAAACTTATGTGGTAAAACGAGATGGATACAAGTTCCAATAAATATGGAGGACCATGTTATTGTTCCAAACATGGATTCAGATATGGAGGATGCTGACCAATTTGTCAGAGACTACATTTCCCACCTTACCAAAAGCCCTCTTGACCTTTCCAAGCCACTATGGGAAGTCCATATCCTCAATGTCAAAACCTCTGATGCAGAAGCTGTTGCAGTGATTCGGATTCACCATTCGATTGGGGATGGCGCGTCCCTCATGTCACTTCTACTAGCTTGTACCAGAAAAACATCGGACCCGGATGCATTGCCTAGTGTTCCAACCAAGAGGAAACATGAGGGTAGTTCTTCAAGTGAATCGAGCGTGTTCTGGTGGTTGTTATTGGCTATTTGGTCAGCAGTAACATTGATAGGGAACACTCTTGTTGATATTGTGCTGTTTGTAGCCACTATTCTGGTTTTGAAAGACACAAAGACTCCTATTAAAGGTCCACCTGGGGTTGAGCTTACTGCCAAGCGCTTCTTGCATCGAACAGTTAGTTTTGATCACATCAAACAAGTGAAGAATGCTATGAACATGACAATCAATGATGTTGTATTAGGAGTGACACAGGCGGGTCTATCGCAATATTTGAACTGCAGATATGCAGCAGGTGAAAATGAGAAAGATGAGGGAGCAAAGAAGAAGGGACATAATCTACCAAAAAGTATCCGCCTTAGAGCAAATATTCTCGTTAATTTACGACCAGCTGTTGGGATCCAGGAACTGGCCGATATGATGGCTAAGAAGTCCAAGACCAAGTGGGGTAATAGGATTGGATATGTCCTGGTACCCTTCACCATTGCTCTACAAGATGACCCTTTGGATTATGTTCGTGGAGCCAAGTTGCTTATGGATCGGAAAAAGCACTCATTTGAAGCATTTTGCACATACTTAAGTGCCAATCTTTTAACCAAACTAATCGGAGCAAAGGGAGCTGGAGCAGTAGCACACAAAGTTCTTTGTAATTCCACATTAGCATTCACAAACTTGATTGGTCCCCTCGAAGAAATTAGCTATTACGGGCATCCAATTACTTACATTGCTCCTAATGTTTACGGCCATCCACATGCATTGCACATGCATTTTCAAAGCTATGTTGACAAAATGATTATTAGCTTAGCCTTTGACCCCGATTTAATCCCTGATCCTGAAAAGTTGTTGGATGATTTAGAAGAATCACTCAAACTCATTCGCGATGCTGTTGTCGAAAAGGAGCTCAACATTGCCAAGGAAGGAAGAAGCAGCTGTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

504

Amino Acids

56.12

Weight (kDa)

8.44

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 58 - 272 4e-17 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 341 - 484 3.2e-49 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000340)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01090 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g36251 FvH4_3g36251 FvH4_3g36252 FvH4_3g36252 FvH4_3g36252 FvH4_3g36252 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_7g32330
prunus_persica Prupe.6G075600_v2.0.a1 Prupe.6G075700_v2.0.a1
pyrus_communis pycom01g15630
rosa_chinensis RchiOBHm_Chr2g0085841 RchiOBHm_Chr5g0044861 RchiOBHm_Chr5g0044871 RchiOBHm_Chr5g0044881 RchiOBHm_Chr5g0044991 RchiOBHm_Chr5g0045031 RchiOBHm_Chr5g0045041 RchiOBHm_Chr5g0057601 RchiOBHm_Chr5g0062541 RchiOBHm_Chr5g0065071
rosa_laevigata RLG00000002367 RLG00000015724 RLG00000019361 RLG00000034303 RLG00000034306 RLG00000034309 RLG00000034314 RLG00000034321 RLG00000035772 RLG00000035776
rosa_multiflora Rmu_co8361081.1_g000001 Rmu_co8459613.1_g000001 Rmu_sc0001648.1_g000038 Rmu_sc0001648.1_g000049 Rmu_sc0001748.1_g000010 Rmu_sc0002915.1_g000019 Rmu_sc0003352.1_g000043 Rmu_sc0004567.1_g000020 Rmu_sc0004720.1_g000006 Rmu_sc0004730.1_g000006 Rmu_sc0007421.1_g000010 Rmu_sc0008894.1_g000003 Rmu_sc0009359.1_g000002 Rmu_sc0015213.1_g000016
rosa_roxburghii Rroxscaffold_1G00015930 Rroxscaffold_1G00016050 Rroxscaffold_1G00016250 Rroxscaffold_1G00036100 Rroxscaffold_1G00036110 Rroxscaffold_1G00036180 Rroxscaffold_2G00154970 Rroxscaffold_7G00201680
rosa_rugosa Rorug01G0463800 Rorug01G0463900 Rorug01G0464000.1 Rorug01G0464100 Rorug01G0464100 Rorug01G0464200 Rorug01G0464200 Rorug02G0276400 Rorug05G0219500 Rorug05G0219600 Rorug05G0219600 Rorug05G0219800 Rorug05G0220200 Rorug05G0369900 Rorug05G0370000
rosa_samantha Rh1AG259700 Rh2BG013700 Rh2BG456700 Rh2CG014100 Rh2DG015400 Rh2DG466500 Rh4BG040500 Rh5AG273800 Rh5AG301300 Rh5AG301900 Rh5AG426100 Rh5AG428500 Rh5BG308600 Rh5BG309600 Rh5BG443600 Rh5CG335400 Rh5CG335700 Rh5CG335900 Rh5CG336200 Rh5CG411400 Rh5CG411500 Rh5CG464000 Rh5CG465900 Rh6DG082100
rosa_wichuraiana Rw2G001140 Rw5G027930 Rw5G040030 Rw5G040210 Rw5G040230 Rw6G016420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 860
AasI GACNNNNNNGTC 1 cut(s) 326
Acc36I ACCTGC 1 cut(s) 860
Acc65I GGTACC 1 cut(s) 1048
AccB1I GGYRCC 1 cut(s) 1048
AccB7I CCANNNNNTGG 2 cut(s) 971, 985
AccII CGCG 3 cut(s) 79, 470, 1455
AciI CCGC 2 cut(s) 833, 931
AclWI GGATC 5 cut(s) 149, 970, 983, 1122, 1400
AcoI YGGCCR 2 cut(s) 987, 1318
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 2 cut(s) 499, 1050
AfeI AGCGCT 1 cut(s) 737
AfiI CCNNNNNNNGG 3 cut(s) 704, 971, 985
AflII CTTAAG 1 cut(s) 1153
AgsI TTSAA 6 cut(s) 172, 570, 682, 853, 1136, 1349
AjnI CCWGG 3 cut(s) 712, 978, 1044
AjuI GAANNNNNNNTTGG 2 cut(s) 283, 315
Alw21I GWGCWC 1 cut(s) 1479
Alw26I GTCTC 1 cut(s) 327
AlwI GGATC 5 cut(s) 149, 970, 983, 1122, 1400
AlwNI CAGNNNCTG 2 cut(s) 428, 985
Aor51HI AGCGCT 1 cut(s) 737
AoxI GGCC 2 cut(s) 987, 1318
ApeKI GCWGC 6 cut(s) 15, 74, 105, 132, 866, 1503
Asp718I GGTACC 1 cut(s) 1048
AspLEI GCGC 4 cut(s) 79, 164, 470, 738
AspS9I GGNCC 4 cut(s) 274, 514, 707, 1256
AsuC2I CCSGG 2 cut(s) 71, 518
AsuHPI GGTGA 5 cut(s) 84, 226, 440, 884, 1048
AvaII GGWCC 4 cut(s) 274, 514, 707, 1256
BamHI GGATCC 1 cut(s) 975
BanI GGYRCC 1 cut(s) 1048
BanII GRGCYC 1 cut(s) 1479
Bbv12I GWGCWC 1 cut(s) 1479
BbvI GCAGC 5 cut(s) 27, 86, 92, 144, 878
BccI CCATC 5 cut(s) 37, 240, 458, 991, 1329
BceAI ACGGC 1 cut(s) 1333
BciT130I CCWGG 3 cut(s) 714, 980, 1046
BciVI GTATCC 2 cut(s) 243, 938
BclI TGATCA 1 cut(s) 763
BcnI CCSGG 2 cut(s) 71, 518
BcoDI GTCTC 1 cut(s) 327
BfaI CTAG 3 cut(s) 204, 491, 531
BfmI CTRYAG 1 cut(s) 856
BfoI RGCGCY 2 cut(s) 165, 739
BfrI CTTAAG 1 cut(s) 1153
BfuAI ACCTGC 1 cut(s) 860
BfuI GTATCC 2 cut(s) 243, 938
BisI GCNGC 6 cut(s) 16, 75, 106, 133, 867, 1504
BlpI GCTNAGC 1 cut(s) 1378
BlsI GCNGC 6 cut(s) 17, 76, 107, 134, 868, 1505
Bme1390I CCNGG 5 cut(s) 71, 518, 714, 980, 1046
Bme18I GGWCC 4 cut(s) 274, 514, 707, 1256
BmgT120I GGNCC 4 cut(s) 274, 514, 707, 1256
BmiI GGNNCC 5 cut(s) 516, 977, 1050, 1099, 1258
BmrFI CCNGG 5 cut(s) 71, 518, 714, 980, 1046
BmsI GCATC 8 cut(s) 144, 199, 304, 409, 511, 754, 1294, 1447
BpmI CTGGAG 1 cut(s) 1218
Bpu1102I GCTNAGC 1 cut(s) 1378
BpuMI CCSGG 2 cut(s) 71, 518
BsaJI CCNNGG 2 cut(s) 713, 1488
BsaXI ACNNNNNCTCC 2 cut(s) 679, 709
Bsc4I CCNNNNNNNGG 3 cut(s) 704, 971, 985
Bse118I RCCGGY 1 cut(s) 164
Bse1I ACTGG 1 cut(s) 990
Bse3DI GCAATG 5 cut(s) 524, 1059, 1299, 1331, 1482
BseBI CCWGG 3 cut(s) 714, 980, 1046
BseDI CCNNGG 2 cut(s) 713, 1488
BseGI GGATG 7 cut(s) 190, 319, 469, 526, 1285, 1321, 1429
BseLI CCNNNNNNNGG 3 cut(s) 704, 971, 985
BseMI GCAATG 5 cut(s) 524, 1059, 1299, 1331, 1482
BseNI ACTGG 1 cut(s) 990
BseXI GCAGC 5 cut(s) 27, 86, 92, 144, 878
BsgI GTGCAG 1 cut(s) 151
Bsh1236I CGCG 3 cut(s) 79, 470, 1455
BshFI GGCC 2 cut(s) 989, 1320
BshNI GGYRCC 1 cut(s) 1048
BsiHKAI GWGCWC 1 cut(s) 1479
BsiSI CCGG 3 cut(s) 71, 165, 518
BslFI GGGAC 3 cut(s) 457, 921, 1242
BslI CCNNNNNNNGG 3 cut(s) 704, 971, 985
BsmAI GTCTC 1 cut(s) 327
BsmFI GGGAC 3 cut(s) 457, 921, 1242
BsmI GAATGC 2 cut(s) 790, 1238
BsnI GGCC 2 cut(s) 989, 1320
Bsp1286I GDGCHC 1 cut(s) 1479
Bsp143I GATC 5 cut(s) 141, 763, 975, 1114, 1405
Bsp1720I GCTNAGC 1 cut(s) 1378
Bsp68I TCGCGA 1 cut(s) 1455
BspACI CCGC 2 cut(s) 833, 931
BspANI GGCC 2 cut(s) 989, 1320
BspFNI CGCG 3 cut(s) 79, 470, 1455
BspLI GGNNCC 5 cut(s) 516, 977, 1050, 1099, 1258
BspMAI CTGCAG 1 cut(s) 860
BspMI ACCTGC 1 cut(s) 860
BspPI GGATC 5 cut(s) 149, 970, 983, 1122, 1400
BspT107I GGYRCC 1 cut(s) 1048
BspTI CTTAAG 1 cut(s) 1153
BsrDI GCAATG 5 cut(s) 524, 1059, 1299, 1331, 1482
BsrFI RCCGGY 1 cut(s) 164
BsrI ACTGG 1 cut(s) 990
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 2 cut(s) 713, 1488
BssMI GATC 5 cut(s) 141, 763, 975, 1114, 1405
BssT1I CCWWGG 1 cut(s) 1488
Bst2UI CCWGG 3 cut(s) 714, 980, 1046
Bst4CI ACNGT 1 cut(s) 754
BstAFI CTTAAG 1 cut(s) 1153
BstC8I GCNNGC 2 cut(s) 20, 166
BstDEI CTNAG 4 cut(s) 65, 935, 1002, 1378
BstENI CCTNNNNNAGG 1 cut(s) 702
BstF5I GGATG 7 cut(s) 190, 319, 469, 526, 1285, 1321, 1429
BstFNI CGCG 3 cut(s) 79, 470, 1455
BstH2I RGCGCY 2 cut(s) 165, 739
BstHHI GCGC 4 cut(s) 79, 164, 470, 738
BstKTI GATC 5 cut(s) 144, 766, 978, 1117, 1408
BstMAI GTCTC 1 cut(s) 327
BstMBI GATC 5 cut(s) 141, 763, 975, 1114, 1405
BstMWI GCNNNNNNNGC 3 cut(s) 204, 742, 1193
BstNI CCWGG 3 cut(s) 714, 980, 1046
BstNSI RCATGY 2 cut(s) 1331, 1342
BstSCI CCNGG 5 cut(s) 69, 516, 712, 978, 1044
BstSFI CTRYAG 1 cut(s) 856
BstUI CGCG 3 cut(s) 79, 470, 1455
BstV1I GCAGC 5 cut(s) 27, 86, 92, 144, 878
BstX2I RGATCY 1 cut(s) 975
BstXI CCANNNNNNTGG 2 cut(s) 458, 673
BstYI RGATCY 1 cut(s) 975
BsuI GTATCC 2 cut(s) 243, 938
BsuRI GGCC 2 cut(s) 989, 1320
BtgZI GCGATG 1 cut(s) 1470
BtsCI GGATG 7 cut(s) 190, 319, 469, 526, 1285, 1321, 1429
BtsI GCAGTG 1 cut(s) 441
BtsIMutI CAGTG 1 cut(s) 441
BtuMI TCGCGA 1 cut(s) 1455
BveI ACCTGC 1 cut(s) 860
Cac8I GCNNGC 2 cut(s) 20, 166
CaiI CAGNNNCTG 2 cut(s) 428, 985
CfoI GCGC 4 cut(s) 79, 164, 470, 738
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 4 cut(s) 274, 514, 707, 1256
CseI GACGC 2 cut(s) 68, 459
Csp6I GTAC 2 cut(s) 498, 1049
CspCI CAANNNNNGTGG 2 cut(s) 1314, 1349
CviAII CATG 7 cut(s) 278, 295, 478, 554, 796, 1328, 1339
CviQI GTAC 2 cut(s) 498, 1049
DdeI CTNAG 4 cut(s) 65, 935, 1002, 1378
DpnI GATC 5 cut(s) 143, 765, 977, 1116, 1407
DpnII GATC 5 cut(s) 141, 763, 975, 1114, 1405
DrdI GACNNNNNNGTC 1 cut(s) 326
DseDI GACNNNNNNGTC 1 cut(s) 326
EaeI YGGCCR 2 cut(s) 987, 1318
EciI GGCGGA 1 cut(s) 920
Ecl136II GAGCTC 1 cut(s) 1477
Eco130I CCWWGG 1 cut(s) 1488
Eco24I GRGCYC 1 cut(s) 1479
Eco47I GGWCC 4 cut(s) 274, 514, 707, 1256
Eco47III AGCGCT 1 cut(s) 737
Eco53kI GAGCTC 1 cut(s) 1477
Eco57I CTGAAG 1 cut(s) 171
EcoICRI GAGCTC 1 cut(s) 1477
EcoNI CCTNNNNNAGG 1 cut(s) 702
EcoRII CCWGG 3 cut(s) 712, 978, 1044
EcoT14I CCWWGG 1 cut(s) 1488
EcoT22I ATGCAT 3 cut(s) 526, 1333, 1344
EcoT38I GRGCYC 1 cut(s) 1479
ErhI CCWWGG 1 cut(s) 1488
FaeI CATG 7 cut(s) 281, 298, 481, 557, 799, 1331, 1342
FalI AAGNNNNNCTT 4 cut(s) 164, 196, 725, 757
FaqI GGGAC 3 cut(s) 457, 921, 1242
FatI CATG 7 cut(s) 277, 294, 477, 553, 795, 1327, 1338
FauI CCCGC 1 cut(s) 826
FbaI TGATCA 1 cut(s) 763
Fnu4HI GCNGC 6 cut(s) 16, 75, 106, 133, 867, 1504
FokI GGATG 7 cut(s) 177, 326, 476, 533, 1272, 1308, 1436
FriOI GRGCYC 1 cut(s) 1479
Fsp4HI GCNGC 6 cut(s) 16, 75, 106, 133, 867, 1504
FspBI CTAG 3 cut(s) 204, 491, 531
GlaI GCGC 4 cut(s) 78, 163, 469, 737
GluI GCNGC 6 cut(s) 16, 75, 106, 133, 867, 1504
GsuI CTGGAG 1 cut(s) 1218
HaeII RGCGCY 2 cut(s) 165, 739
HaeIII GGCC 2 cut(s) 989, 1320
HapII CCGG 3 cut(s) 71, 165, 518
HgaI GACGC 2 cut(s) 68, 459
HhaI GCGC 4 cut(s) 79, 164, 470, 738
Hin1II CATG 7 cut(s) 281, 298, 481, 557, 799, 1331, 1342
Hin6I GCGC 4 cut(s) 77, 162, 468, 736
HinP1I GCGC 4 cut(s) 77, 162, 468, 736
HincII GTYRAC 1 cut(s) 1360
HindII GTYRAC 1 cut(s) 1360
HinfI GANTC 6 cut(s) 299, 439, 445, 575, 694, 1436
HpaII CCGG 3 cut(s) 71, 165, 518
HphI GGTGA 5 cut(s) 84, 226, 440, 884, 1048
Hpy166II GTNNAC 3 cut(s) 710, 1315, 1360
Hpy188I TCNGA 7 cut(s) 304, 332, 418, 444, 514, 1119, 1184
Hpy188III TCNNGA 5 cut(s) 139, 149, 365, 1409, 1454
Hpy8I GTNNAC 3 cut(s) 710, 1315, 1360
HpyAV CCTTC 5 cut(s) 166, 211, 898, 1063, 1487
HpyCH4III ACNGT 1 cut(s) 754
HpyF10VI GCNNNNNNNGC 3 cut(s) 204, 742, 1193
HpyF3I CTNAG 4 cut(s) 65, 935, 1002, 1378
Hsp92II CATG 7 cut(s) 281, 298, 481, 557, 799, 1331, 1342
HspAI GCGC 4 cut(s) 77, 162, 468, 736
KpnI GGTACC 1 cut(s) 1052
KroI GCCGGC 1 cut(s) 164
KroNI GCCGGC 1 cut(s) 166
Ksp22I TGATCA 1 cut(s) 763
Kzo9I GATC 5 cut(s) 141, 763, 975, 1114, 1405
LmnI GCTCC 7 cut(s) 893, 1097, 1184, 1193, 1199, 1309, 1474
Lsp1109I GCAGC 5 cut(s) 27, 86, 92, 144, 878
LweI GCATC 8 cut(s) 144, 199, 304, 409, 511, 754, 1294, 1447
MaeI CTAG 3 cut(s) 204, 491, 531
MaeIII GTNAC 3 cut(s) 480, 619, 823
MalI GATC 5 cut(s) 143, 765, 977, 1116, 1407
MboI GATC 5 cut(s) 141, 763, 975, 1114, 1405
MboII GAAGA 6 cut(s) 558, 793, 913, 1277, 1445, 1509
MflI RGATCY 1 cut(s) 975
MhlI GDGCHC 1 cut(s) 1479
MluCI AATT 5 cut(s) 323, 955, 1225, 1269, 1290
MlyI GAGTC 1 cut(s) 688
MmeI TCCRAC 2 cut(s) 563, 1401
Mph1103I ATGCAT 3 cut(s) 526, 1333, 1344
MroNI GCCGGC 1 cut(s) 164
MseI TTAA 5 cut(s) 702, 954, 1154, 1169, 1397
MslI CAYNNNNRTG 2 cut(s) 122, 1326
MspA1I CMGCKG 3 cut(s) 105, 968, 1506
MspCI CTTAAG 1 cut(s) 1153
MspI CCGG 3 cut(s) 71, 165, 518
MspR9I CCNGG 5 cut(s) 71, 518, 714, 980, 1046
Mva1269I GAATGC 2 cut(s) 790, 1238
MvaI CCWGG 3 cut(s) 714, 980, 1046
MvnI CGCG 3 cut(s) 79, 470, 1455
MwoI GCNNNNNNNGC 3 cut(s) 204, 742, 1193
NaeI GCCGGC 1 cut(s) 166
NciI CCSGG 2 cut(s) 71, 518
NdeII GATC 5 cut(s) 141, 763, 975, 1114, 1405
NgoMIV GCCGGC 1 cut(s) 164
NlaIII CATG 7 cut(s) 281, 298, 481, 557, 799, 1331, 1342
NlaIV GGNNCC 5 cut(s) 516, 977, 1050, 1099, 1258
NmuCI GTSAC 2 cut(s) 480, 823
NruI TCGCGA 1 cut(s) 1455
NsiI ATGCAT 3 cut(s) 526, 1333, 1344
NspI RCATGY 2 cut(s) 1331, 1342
PaqCI CACCTGC 1 cut(s) 860
PctI GAATGC 2 cut(s) 790, 1238
PdiI GCCGGC 1 cut(s) 166
PfeI GAWTC 5 cut(s) 299, 439, 445, 575, 1436
PflMI CCANNNNNTGG 2 cut(s) 971, 985
PfoI TCCNGGA 1 cut(s) 978
PkrI GCNGC 6 cut(s) 17, 76, 107, 134, 868, 1505
PleI GAGTC 1 cut(s) 688
PpsI GAGTC 1 cut(s) 688
Psp124BI GAGCTC 1 cut(s) 1479
Psp6I CCWGG 3 cut(s) 712, 978, 1044
PspGI CCWGG 3 cut(s) 712, 978, 1044
PspN4I GGNNCC 5 cut(s) 516, 977, 1050, 1099, 1258
PspPI GGNCC 4 cut(s) 274, 514, 707, 1256
PstI CTGCAG 1 cut(s) 860
PstNI CAGNNNCTG 2 cut(s) 428, 985
PsuI RGATCY 1 cut(s) 975
PvuII CAGCTG 3 cut(s) 105, 968, 1506
RruI TCGCGA 1 cut(s) 1455
RsaI GTAC 2 cut(s) 499, 1050
RsaNI GTAC 2 cut(s) 498, 1049
RseI CAYNNNNRTG 2 cut(s) 122, 1326
SacI GAGCTC 1 cut(s) 1479
SaqAI TTAA 5 cut(s) 702, 954, 1154, 1169, 1397
SatI GCNGC 6 cut(s) 16, 75, 106, 133, 867, 1504
Sau3AI GATC 5 cut(s) 141, 763, 975, 1114, 1405
Sau96I GGNCC 4 cut(s) 274, 514, 707, 1256
SchI GAGTC 1 cut(s) 688
ScrFI CCNGG 5 cut(s) 71, 518, 714, 980, 1046
SduI GDGCHC 1 cut(s) 1479
SfaNI GCATC 8 cut(s) 144, 199, 304, 409, 511, 754, 1294, 1447
SfcI CTRYAG 1 cut(s) 856
SinI GGWCC 4 cut(s) 274, 514, 707, 1256
SmiMI CAYNNNNRTG 2 cut(s) 122, 1326
SmlI CTYRAG 1 cut(s) 1153
SmoI CTYRAG 1 cut(s) 1153
Sse9I AATT 5 cut(s) 323, 955, 1225, 1269, 1290
SsiI CCGC 2 cut(s) 833, 931
SspI AATATT 2 cut(s) 848, 946
SspMI CTAG 3 cut(s) 204, 491, 531
SstI GAGCTC 1 cut(s) 1479
StyD4I CCNGG 5 cut(s) 69, 516, 712, 978, 1044
StyI CCWWGG 1 cut(s) 1488
TaaI ACNGT 1 cut(s) 754
TaqI TCGA 5 cut(s) 455, 578, 748, 1263, 1467
TasI AATT 5 cut(s) 323, 955, 1225, 1269, 1290
TfiI GAWTC 5 cut(s) 299, 439, 445, 575, 1436
Tru1I TTAA 5 cut(s) 702, 954, 1154, 1169, 1397
Tru9I TTAA 5 cut(s) 702, 954, 1154, 1169, 1397
TscAI CASTG 1 cut(s) 441
TseFI GTSAC 2 cut(s) 480, 823
TseI GCWGC 6 cut(s) 15, 74, 105, 132, 866, 1503
Tsp45I GTSAC 2 cut(s) 480, 823
TspDTI ATGAA 1 cut(s) 806
TspRI CASTG 1 cut(s) 441
Van91I CCANNNNNTGG 2 cut(s) 971, 985
Vha464I CTTAAG 1 cut(s) 1153
VpaK11BI GGWCC 4 cut(s) 274, 514, 707, 1256
XagI CCTNNNNNAGG 1 cut(s) 702
XceI RCATGY 2 cut(s) 1331, 1342
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XspI CTAG 3 cut(s) 204, 491, 531
Zsp2I ATGCAT 3 cut(s) 526, 1333, 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.