XH domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| XH | PF03469 | 130 - 209 | 2e-22 | XH domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 100 |
| AcsI | RAATTY | 1 cut(s) | 598 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 532 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 38, 70 |
| AluBI | AGCT | 8 cut(s) | 10, 34, 88, 109, 136, 169, 259, 322 |
| AluI | AGCT | 8 cut(s) | 10, 34, 88, 109, 136, 169, 259, 322 |
| Alw21I | GWGCWC | 2 cut(s) | 96, 488 |
| Alw26I | GTCTC | 1 cut(s) | 542 |
| AoxI | GGCC | 2 cut(s) | 204, 329 |
| ApaI | GGGCCC | 1 cut(s) | 333 |
| ApeKI | GCWGC | 2 cut(s) | 322, 428 |
| ApoI | RAATTY | 1 cut(s) | 598 |
| AspS9I | GGNCC | 3 cut(s) | 205, 329, 330 |
| AsuHPI | GGTGA | 1 cut(s) | 410 |
| BaeGI | GKGCMC | 1 cut(s) | 333 |
| BanII | GRGCYC | 1 cut(s) | 333 |
| BbsI | GAAGAC | 2 cut(s) | 395, 611 |
| Bbv12I | GWGCWC | 2 cut(s) | 96, 488 |
| BbvI | GCAGC | 2 cut(s) | 309, 440 |
| BccI | CCATC | 1 cut(s) | 344 |
| BcoDI | GTCTC | 1 cut(s) | 542 |
| BfmI | CTRYAG | 2 cut(s) | 110, 323 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 182 |
| BisI | GCNGC | 3 cut(s) | 100, 323, 429 |
| BlsI | GCNGC | 3 cut(s) | 101, 324, 430 |
| BmgT120I | GGNCC | 3 cut(s) | 205, 329, 330 |
| BmiI | GGNNCC | 4 cut(s) | 330, 331, 332, 524 |
| BmsI | GCATC | 1 cut(s) | 37 |
| BpiI | GAAGAC | 2 cut(s) | 395, 611 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 470, 502 |
| BpmI | CTGGAG | 1 cut(s) | 110 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 532 |
| BseGI | GGATG | 1 cut(s) | 550 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 532 |
| BseMII | CTCAG | 2 cut(s) | 156, 600 |
| BseSI | GKGCMC | 1 cut(s) | 333 |
| BseXI | GCAGC | 2 cut(s) | 309, 440 |
| BsgI | GTGCAG | 1 cut(s) | 272 |
| BshFI | GGCC | 2 cut(s) | 206, 331 |
| BsiHKAI | GWGCWC | 2 cut(s) | 96, 488 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 532 |
| BsmAI | GTCTC | 1 cut(s) | 542 |
| BsnI | GGCC | 2 cut(s) | 206, 331 |
| Bsp120I | GGGCCC | 1 cut(s) | 329 |
| Bsp1286I | GDGCHC | 3 cut(s) | 96, 333, 488 |
| Bsp143I | GATC | 2 cut(s) | 265, 400 |
| BspACI | CCGC | 1 cut(s) | 100 |
| BspANI | GGCC | 2 cut(s) | 206, 331 |
| BspCNI | CTCAG | 2 cut(s) | 155, 601 |
| BspLI | GGNNCC | 4 cut(s) | 330, 331, 332, 524 |
| BspMAI | CTGCAG | 1 cut(s) | 327 |
| BssMI | GATC | 2 cut(s) | 265, 400 |
| BstDEI | CTNAG | 2 cut(s) | 142, 609 |
| BstF5I | GGATG | 1 cut(s) | 550 |
| BstKTI | GATC | 2 cut(s) | 268, 403 |
| BstMAI | GTCTC | 1 cut(s) | 542 |
| BstMBI | GATC | 2 cut(s) | 265, 400 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 182, 328 |
| BstNSI | RCATGY | 1 cut(s) | 617 |
| BstSFI | CTRYAG | 2 cut(s) | 110, 323 |
| BstSLI | GKGCMC | 1 cut(s) | 333 |
| BstV1I | GCAGC | 2 cut(s) | 309, 440 |
| BstV2I | GAAGAC | 2 cut(s) | 395, 611 |
| BsuRI | GGCC | 2 cut(s) | 206, 331 |
| BtsCI | GGATG | 1 cut(s) | 550 |
| BtsI | GCAGTG | 3 cut(s) | 94, 192, 480 |
| BtsIMutI | CAGTG | 4 cut(s) | 94, 192, 287, 480 |
| Cfr13I | GGNCC | 3 cut(s) | 205, 329, 330 |
| CviAII | CATG | 1 cut(s) | 614 |
| DdeI | CTNAG | 2 cut(s) | 142, 609 |
| DpnI | GATC | 2 cut(s) | 267, 402 |
| DpnII | GATC | 2 cut(s) | 265, 400 |
| Eco24I | GRGCYC | 1 cut(s) | 333 |
| EcoO109I | RGGNCCY | 2 cut(s) | 329, 330 |
| EcoT38I | GRGCYC | 1 cut(s) | 333 |
| FaeI | CATG | 1 cut(s) | 617 |
| FatI | CATG | 1 cut(s) | 613 |
| FauNDI | CATATG | 1 cut(s) | 117 |
| Fnu4HI | GCNGC | 3 cut(s) | 100, 323, 429 |
| FokI | GGATG | 1 cut(s) | 557 |
| FriOI | GRGCYC | 1 cut(s) | 333 |
| Fsp4HI | GCNGC | 3 cut(s) | 100, 323, 429 |
| GluI | GCNGC | 3 cut(s) | 100, 323, 429 |
| GsuI | CTGGAG | 1 cut(s) | 110 |
| HaeIII | GGCC | 2 cut(s) | 206, 331 |
| Hin1II | CATG | 1 cut(s) | 617 |
| HindIII | AAGCTT | 1 cut(s) | 134 |
| HinfI | GANTC | 3 cut(s) | 4, 61, 512 |
| HphI | GGTGA | 1 cut(s) | 410 |
| Hpy166II | GTNNAC | 1 cut(s) | 619 |
| Hpy188I | TCNGA | 3 cut(s) | 66, 145, 274 |
| Hpy188III | TCNNGA | 1 cut(s) | 404 |
| Hpy8I | GTNNAC | 1 cut(s) | 619 |
| HpyAV | CCTTC | 2 cut(s) | 241, 406 |
| HpyCH4V | TGCA | 5 cut(s) | 253, 287, 325, 428, 449 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 182, 328 |
| HpyF3I | CTNAG | 2 cut(s) | 142, 609 |
| Hsp92II | CATG | 1 cut(s) | 617 |
| Kzo9I | GATC | 2 cut(s) | 265, 400 |
| LmnI | GCTCC | 5 cut(s) | 91, 106, 174, 256, 306 |
| LpnPI | CCDG | 7 cut(s) | 74, 167, 179, 221, 239, 311, 537 |
| Lsp1109I | GCAGC | 2 cut(s) | 309, 440 |
| LweI | GCATC | 1 cut(s) | 37 |
| MalI | GATC | 2 cut(s) | 267, 402 |
| MboI | GATC | 2 cut(s) | 265, 400 |
| MboII | GAAGA | 7 cut(s) | 223, 400, 450, 467, 590, 593, 616 |
| MhlI | GDGCHC | 3 cut(s) | 96, 333, 488 |
| MnlI | CCTC | 4 cut(s) | 187, 196, 490, 502 |
| MseI | TTAA | 3 cut(s) | 219, 239, 344 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 182, 328 |
| NdeI | CATATG | 1 cut(s) | 117 |
| NdeII | GATC | 2 cut(s) | 265, 400 |
| NlaIII | CATG | 1 cut(s) | 617 |
| NlaIV | GGNNCC | 4 cut(s) | 330, 331, 332, 524 |
| NspI | RCATGY | 1 cut(s) | 617 |
| PfeI | GAWTC | 3 cut(s) | 4, 61, 512 |
| PkrI | GCNGC | 3 cut(s) | 101, 324, 430 |
| PspN4I | GGNNCC | 4 cut(s) | 330, 331, 332, 524 |
| PspOMI | GGGCCC | 1 cut(s) | 329 |
| PspPI | GGNCC | 3 cut(s) | 205, 329, 330 |
| PstI | CTGCAG | 1 cut(s) | 327 |
| SaqAI | TTAA | 3 cut(s) | 219, 239, 344 |
| SatI | GCNGC | 3 cut(s) | 100, 323, 429 |
| Sau3AI | GATC | 2 cut(s) | 265, 400 |
| Sau96I | GGNCC | 3 cut(s) | 205, 329, 330 |
| SduI | GDGCHC | 3 cut(s) | 96, 333, 488 |
| SfaNI | GCATC | 1 cut(s) | 37 |
| SfcI | CTRYAG | 2 cut(s) | 110, 323 |
| SsiI | CCGC | 1 cut(s) | 100 |
| TauI | GCSGC | 1 cut(s) | 102 |
| TfiI | GAWTC | 3 cut(s) | 4, 61, 512 |
| Tru1I | TTAA | 3 cut(s) | 219, 239, 344 |
| Tru9I | TTAA | 3 cut(s) | 219, 239, 344 |
| TscAI | CASTG | 4 cut(s) | 101, 192, 294, 480 |
| TseI | GCWGC | 2 cut(s) | 322, 428 |
| TspDTI | ATGAA | 2 cut(s) | 89, 591 |
| TspRI | CASTG | 4 cut(s) | 101, 192, 294, 480 |
| XapI | RAATTY | 1 cut(s) | 598 |
| XceI | RCATGY | 1 cut(s) | 617 |