Rmu_sc0001648.1_g000038

XH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001648.1
OG0000340
Physical Location & Seq
Reverse (-)
224399 .. 228342
3944 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001648.1_g000038.1.cds

Sequence Viewer

Length: 1491 bp
atggccctccaacgccaacctcgtgtggaaaccacccaatctaaccctcaaaccttcatcacctcttttgactctcactggaatgaagtggatgatgtgaatgagatggaatggtggtctaatccagagagacccaaggctcggtgggtgcaaaattgtttgtcccgaattcgccaaagtagagctcggctcaagatagacctaggtttgtttggaggagcctgtttcctgaaaacatggggaggcagccatctatatgatttggatctgaagatggcaatgatggacatcgcaaatcataaatggaaaagagcttctagtgtttggcataaaggacgggagcaggagatgtttgggttggattggcggcgccacgctacagatctgccattgcagcaagtcttcaaaattaggctagcagtgtctgcattcgactatgacgggaggctgggagggatgcagcctaattactcaaggggatgcagactgaggttgaagagacacacgcatcgatcagcgtgcacgacggtggagtctgcttcgaatgattgcatggtaatggcgcggctggtcgatgggttgagaagcggctgtgctgctagagatcgaaggtcgggttctgatggggtgcccaaactgcccaaagtaaaatatgattgggggccccatggaggtttgggacctaaatggcccaaacgcaccaagtgtttctctttcccggctcagccttcccatatagcttcacttcctccaccttcatcaccaggtttgccgtatctcacatacaaggagaaagagatatggaatgagacaactagcacagagggaaagaaggacacttacgaactggagctaatgttggcagaagagagaaagctatggcagagagaaaagcatcagcttcaactaaagaacattgaattggagaatcagattgatatgaaaaagaatgagctggagcactgccgcacggagctacagcatagggagaggagcaataatgatgagctgcagggggcccgtaaagagttaattgatggactgaaaaatcattcaaaaatctatattggcgtgaagacattgggtgatcttgacttgaaggcatttcaagttgcagccaagagaagatttactgcattagaagaagcaaatgagagggcagtggagttgtgctctatgtgggaggattatgttggggattctaaatggaacccatacaaggttattatggatgagacaggaaaaagaatggaaattattgatgaagaagataaaaagttgaaaaatttgaagactgagctgggggatgaagtatacaaggtggtgactacttcgttaatggaattgaatgaacataattccagtgggaggtataagatacaagagctttggaattttaaagcagggaggaaggcaacacttaaagagggagttgcttacattctaaagcaatggaacgtgcttaagaacacgaagcggcgaagaaactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

496

Amino Acids

57.7

Weight (kDa)

9.31

Isoelectric Point (pI)

53.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000340)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01090 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g24990 FvH4_3g36251 FvH4_3g36251 FvH4_3g36252 FvH4_3g36252 FvH4_3g36252 FvH4_3g36252 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_3g36253 FvH4_7g32330
prunus_persica Prupe.6G075600_v2.0.a1 Prupe.6G075700_v2.0.a1
pyrus_communis pycom01g15630
rosa_chinensis RchiOBHm_Chr2g0085841 RchiOBHm_Chr5g0044861 RchiOBHm_Chr5g0044871 RchiOBHm_Chr5g0044881 RchiOBHm_Chr5g0044991 RchiOBHm_Chr5g0045031 RchiOBHm_Chr5g0045041 RchiOBHm_Chr5g0057601 RchiOBHm_Chr5g0062541 RchiOBHm_Chr5g0065071
rosa_laevigata RLG00000002367 RLG00000015724 RLG00000019361 RLG00000034303 RLG00000034306 RLG00000034309 RLG00000034314 RLG00000034321 RLG00000035772 RLG00000035776
rosa_multiflora Rmu_co8361081.1_g000001 Rmu_co8459613.1_g000001 Rmu_sc0001648.1_g000038 Rmu_sc0001648.1_g000049 Rmu_sc0001748.1_g000010 Rmu_sc0002915.1_g000019 Rmu_sc0003352.1_g000043 Rmu_sc0004567.1_g000020 Rmu_sc0004720.1_g000006 Rmu_sc0004730.1_g000006 Rmu_sc0007421.1_g000010 Rmu_sc0008894.1_g000003 Rmu_sc0009359.1_g000002 Rmu_sc0015213.1_g000016
rosa_roxburghii Rroxscaffold_1G00015930 Rroxscaffold_1G00016050 Rroxscaffold_1G00016250 Rroxscaffold_1G00036100 Rroxscaffold_1G00036110 Rroxscaffold_1G00036180 Rroxscaffold_2G00154970 Rroxscaffold_7G00201680
rosa_rugosa Rorug01G0463800 Rorug01G0463900 Rorug01G0464000.1 Rorug01G0464100 Rorug01G0464100 Rorug01G0464200 Rorug01G0464200 Rorug02G0276400 Rorug05G0219500 Rorug05G0219600 Rorug05G0219600 Rorug05G0219800 Rorug05G0220200 Rorug05G0369900 Rorug05G0370000
rosa_samantha Rh1AG259700 Rh2BG013700 Rh2BG456700 Rh2CG014100 Rh2DG015400 Rh2DG466500 Rh4BG040500 Rh5AG273800 Rh5AG301300 Rh5AG301900 Rh5AG426100 Rh5AG428500 Rh5BG308600 Rh5BG309600 Rh5BG443600 Rh5CG335400 Rh5CG335700 Rh5CG335900 Rh5CG336200 Rh5CG411400 Rh5CG411500 Rh5CG464000 Rh5CG465900 Rh6DG082100
rosa_wichuraiana Rw2G001140 Rw5G027930 Rw5G040030 Rw5G040210 Rw5G040230 Rw6G016420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 532
AccB1I GGYRCC 2 cut(s) 369, 628
AccI GTMKAC 1 cut(s) 1314
AccII CGCG 1 cut(s) 565
AciI CCGC 5 cut(s) 367, 565, 588, 967, 1477
AclWI GGATC 1 cut(s) 273
AcsI RAATTY 3 cut(s) 168, 1285, 1393
AcuI CTGAAG 1 cut(s) 290
AcyI GRCGYC 1 cut(s) 370
AdeI CACNNNGTG 1 cut(s) 705
AfiI CCNNNNNNNGG 4 cut(s) 141, 671, 1219, 1368
AflII CTTAAG 1 cut(s) 1463
AjnI CCWGG 1 cut(s) 763
AjuI GAANNNNNNNTTGG 2 cut(s) 905, 937
AleI CACNNNNGTG 1 cut(s) 527
Alw21I GWGCWC 4 cut(s) 187, 524, 963, 1175
Alw26I GTCTC 4 cut(s) 124, 493, 803, 1229
Alw44I GTGCAC 1 cut(s) 520
AlwI GGATC 1 cut(s) 273
AlwNI CAGNNNCTG 1 cut(s) 425
AoxI GGCC 4 cut(s) 3, 662, 689, 1017
ApaI GGGCCC 2 cut(s) 666, 1021
ApaLI GTGCAC 1 cut(s) 520
ApeKI GCWGC 6 cut(s) 246, 394, 460, 596, 1009, 1115
ApoI RAATTY 3 cut(s) 168, 1285, 1393
AspA2I CCTAGG 1 cut(s) 202
AspLEI GCGC 2 cut(s) 372, 565
AspS9I GGNCC 7 cut(s) 4, 662, 663, 680, 690, 1017, 1018
AsuC2I CCSGG 1 cut(s) 719
AsuHPI GGTGA 4 cut(s) 52, 753, 1097, 1336
AsuII TTCGAA 1 cut(s) 542
AsuNHI GCTAGC 1 cut(s) 415
AvaII GGWCC 1 cut(s) 680
AvrII CCTAGG 1 cut(s) 202
BaeGI GKGCMC 4 cut(s) 524, 633, 666, 1021
BanI GGYRCC 2 cut(s) 369, 628
BanII GRGCYC 3 cut(s) 187, 666, 1021
BarI GAAGNNNNNNTAC 2 cut(s) 824, 856
BauI CACGAG 1 cut(s) 21
BbsI GAAGAC 3 cut(s) 394, 1082, 1298
Bbv12I GWGCWC 4 cut(s) 187, 524, 963, 1175
BbvI GCAGC 6 cut(s) 258, 406, 472, 583, 996, 1127
BccI CCATC 7 cut(s) 100, 258, 268, 277, 569, 617, 1031
BceAI ACGGC 1 cut(s) 757
BcgI CGANNNNNNTGC 2 cut(s) 501, 535
BciT130I CCWGG 1 cut(s) 765
BcnI CCSGG 1 cut(s) 719
BcoDI GTCTC 4 cut(s) 124, 493, 803, 1229
BfaI CTAG 6 cut(s) 203, 318, 416, 600, 816, 1489
BfmI CTRYAG 3 cut(s) 378, 977, 1010
BfoI RGCGCY 1 cut(s) 373
BfrI CTTAAG 1 cut(s) 1463
BglII AGATCT 1 cut(s) 382
BlnI CCTAGG 1 cut(s) 202
BlpI GCTNAGC 1 cut(s) 723
Bme1390I CCNGG 2 cut(s) 719, 765
Bme18I GGWCC 1 cut(s) 680
BmgT120I GGNCC 7 cut(s) 4, 662, 663, 680, 690, 1017, 1018
BmrFI CCNGG 2 cut(s) 719, 765
BmsI GCATC 4 cut(s) 447, 470, 517, 904
BmtI GCTAGC 1 cut(s) 419
BpiI GAAGAC 3 cut(s) 394, 1082, 1298
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 1157, 1189
BpmI CTGGAG 2 cut(s) 869, 977
Bpu1102I GCTNAGC 1 cut(s) 723
Bpu14I TTCGAA 1 cut(s) 542
BpuEI CTTGAG 2 cut(s) 176, 457
BpuMI CCSGG 1 cut(s) 719
Bsa29I ATCGAT 1 cut(s) 511
BsaBI GATNNNNATC 2 cut(s) 264, 287
BsaHI GRCGYC 1 cut(s) 370
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 3 cut(s) 135, 202, 667
BsaXI ACNNNNNCTCC 2 cut(s) 842, 872
Bsc4I CCNNNNNNNGG 4 cut(s) 141, 671, 1219, 1368
Bse1I ACTGG 3 cut(s) 83, 852, 1362
Bse3DI GCAATG 3 cut(s) 285, 389, 1457
Bse8I GATNNNNATC 2 cut(s) 264, 287
BseBI CCWGG 1 cut(s) 765
BseCI ATCGAT 1 cut(s) 511
BseDI CCNNGG 3 cut(s) 135, 202, 667
BseGI GGATG 5 cut(s) 97, 462, 485, 1237, 1312
BseJI GATNNNNATC 2 cut(s) 264, 287
BseLI CCNNNNNNNGG 4 cut(s) 141, 671, 1219, 1368
BseMI GCAATG 3 cut(s) 285, 389, 1457
BseMII CTCAG 3 cut(s) 479, 737, 1287
BseNI ACTGG 3 cut(s) 83, 852, 1362
BseRI GAGGAG 2 cut(s) 231, 1006
BseSI GKGCMC 4 cut(s) 524, 633, 666, 1021
BseXI GCAGC 6 cut(s) 258, 406, 472, 583, 996, 1127
BseYI CCCAGC 2 cut(s) 448, 1300
Bsh1236I CGCG 1 cut(s) 565
BshFI GGCC 4 cut(s) 5, 664, 691, 1019
BshNI GGYRCC 2 cut(s) 369, 628
BshVI ATCGAT 1 cut(s) 511
BsiHKAI GWGCWC 4 cut(s) 187, 524, 963, 1175
BsiSI CCGG 1 cut(s) 719
BslFI GGGAC 2 cut(s) 148, 693
BslI CCNNNNNNNGG 4 cut(s) 141, 671, 1219, 1368
BsmAI GTCTC 4 cut(s) 124, 493, 803, 1229
BsmFI GGGAC 2 cut(s) 148, 693
BsmI GAATGC 1 cut(s) 428
BsnI GGCC 4 cut(s) 5, 664, 691, 1019
Bso31I GGTCTC 1 cut(s) 124
Bsp119I TTCGAA 1 cut(s) 542
Bsp120I GGGCCC 2 cut(s) 662, 1017
Bsp1286I GDGCHC 7 cut(s) 187, 524, 633, 666, 963, 1021, 1175
Bsp143I GATC 5 cut(s) 265, 382, 512, 604, 1087
Bsp1720I GCTNAGC 1 cut(s) 723
Bsp19I CCATGG 1 cut(s) 667
BspACI CCGC 5 cut(s) 367, 565, 588, 967, 1477
BspANI GGCC 4 cut(s) 5, 664, 691, 1019
BspCNI CTCAG 3 cut(s) 480, 736, 1288
BspDI ATCGAT 1 cut(s) 511
BspFNI CGCG 1 cut(s) 565
BspMAI CTGCAG 1 cut(s) 1014
BspOI GCTAGC 1 cut(s) 419
BspPI GGATC 1 cut(s) 273
BspT104I TTCGAA 1 cut(s) 542
BspT107I GGYRCC 2 cut(s) 369, 628
BspTI CTTAAG 1 cut(s) 1463
BspTNI GGTCTC 1 cut(s) 124
BsrDI GCAATG 3 cut(s) 285, 389, 1457
BsrI ACTGG 3 cut(s) 83, 852, 1362
BssECI CCNNGG 3 cut(s) 135, 202, 667
BssMI GATC 5 cut(s) 265, 382, 512, 604, 1087
BssNAI GTATAC 1 cut(s) 1315
BssNI GRCGYC 1 cut(s) 370
BssSI CACGAG 1 cut(s) 21
BssT1I CCWWGG 3 cut(s) 135, 202, 667
Bst1107I GTATAC 1 cut(s) 1315
Bst2BI CACGAG 1 cut(s) 21
Bst2UI CCWGG 1 cut(s) 765
Bst4CI ACNGT 1 cut(s) 529
Bst6I CTCTTC 2 cut(s) 491, 861
BstACI GRCGYC 1 cut(s) 370
BstAFI CTTAAG 1 cut(s) 1463
BstAPI GCANNNNNTGC 1 cut(s) 425
BstBI TTCGAA 1 cut(s) 542
BstC8I GCNNGC 2 cut(s) 417, 520
BstDEI CTNAG 3 cut(s) 488, 723, 1296
BstDSI CCRYGG 1 cut(s) 667
BstF5I GGATG 5 cut(s) 97, 462, 485, 1237, 1312
BstFNI CGCG 1 cut(s) 565
BstH2I RGCGCY 1 cut(s) 373
BstHHI GCGC 2 cut(s) 372, 565
BstKTI GATC 5 cut(s) 268, 385, 515, 607, 1090
BstMAI GTCTC 4 cut(s) 124, 493, 803, 1229
BstMBI GATC 5 cut(s) 265, 382, 512, 604, 1087
BstMWI GCNNNNNNNGC 3 cut(s) 394, 425, 637
BstNI CCWGG 1 cut(s) 765
BstSCI CCNGG 2 cut(s) 717, 763
BstSFI CTRYAG 3 cut(s) 378, 977, 1010
BstSLI GKGCMC 4 cut(s) 524, 633, 666, 1021
BstUI CGCG 1 cut(s) 565
BstV1I GCAGC 6 cut(s) 258, 406, 472, 583, 996, 1127
BstV2I GAAGAC 3 cut(s) 394, 1082, 1298
BstX2I RGATCY 2 cut(s) 265, 382
BstYI RGATCY 2 cut(s) 265, 382
BstZ17I GTATAC 1 cut(s) 1315
Bsu15I ATCGAT 1 cut(s) 511
BsuRI GGCC 4 cut(s) 5, 664, 691, 1019
BsuTUI ATCGAT 1 cut(s) 511
BtgI CCRYGG 1 cut(s) 667
BtgZI GCGATG 1 cut(s) 274
BtsCI GGATG 5 cut(s) 97, 462, 485, 1237, 1312
BtsI GCAGTG 3 cut(s) 426, 961, 1167
BtsIMutI CAGTG 5 cut(s) 76, 426, 961, 1167, 1369
Cac8I GCNNGC 2 cut(s) 417, 520
CaiI CAGNNNCTG 1 cut(s) 425
CfoI GCGC 2 cut(s) 372, 565
Cfr13I GGNCC 7 cut(s) 4, 662, 663, 680, 690, 1017, 1018
ClaI ATCGAT 1 cut(s) 511
CsiI ACCWGGT 1 cut(s) 763
CviAII CATG 3 cut(s) 237, 553, 668
DdeI CTNAG 3 cut(s) 488, 723, 1296
DinI GGCGCC 1 cut(s) 371
DpnI GATC 5 cut(s) 267, 384, 514, 606, 1089
DpnII GATC 5 cut(s) 265, 382, 512, 604, 1087
DraI TTTAAA 1 cut(s) 1399
DraIII CACNNNGTG 1 cut(s) 705
DrdI GACNNNNNNGTC 1 cut(s) 532
DseDI GACNNNNNNGTC 1 cut(s) 532
Eam1104I CTCTTC 2 cut(s) 491, 861
EarI CTCTTC 2 cut(s) 491, 861
Ecl136II GAGCTC 1 cut(s) 185
Eco130I CCWWGG 3 cut(s) 135, 202, 667
Eco24I GRGCYC 3 cut(s) 187, 666, 1021
Eco31I GGTCTC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 680
Eco53kI GAGCTC 1 cut(s) 185
Eco57I CTGAAG 1 cut(s) 290
EcoICRI GAGCTC 1 cut(s) 185
EcoO109I RGGNCCY 4 cut(s) 662, 663, 680, 1017
EcoRI GAATTC 1 cut(s) 168
EcoRII CCWGG 1 cut(s) 763
EcoT14I CCWWGG 3 cut(s) 135, 202, 667
EcoT38I GRGCYC 3 cut(s) 187, 666, 1021
EgeI GGCGCC 1 cut(s) 371
EheI GGCGCC 1 cut(s) 371
ErhI CCWWGG 3 cut(s) 135, 202, 667
FaeI CATG 3 cut(s) 240, 556, 671
FaqI GGGAC 2 cut(s) 148, 693
FatI CATG 3 cut(s) 236, 552, 667
FblI GTMKAC 1 cut(s) 1314
FokI GGATG 5 cut(s) 104, 469, 492, 1244, 1319
FriOI GRGCYC 3 cut(s) 187, 666, 1021
FspBI CTAG 6 cut(s) 203, 318, 416, 600, 816, 1489
GlaI GCGC 2 cut(s) 371, 564
GsaI CCCAGC 2 cut(s) 452, 1304
GsuI CTGGAG 2 cut(s) 869, 977
HaeII RGCGCY 1 cut(s) 373
HaeIII GGCC 4 cut(s) 5, 664, 691, 1019
HapII CCGG 1 cut(s) 719
HhaI GCGC 2 cut(s) 372, 565
Hin1I GRCGYC 1 cut(s) 370
Hin1II CATG 3 cut(s) 240, 556, 671
Hin6I GCGC 2 cut(s) 370, 563
HinP1I GCGC 2 cut(s) 370, 563
HinfI GANTC 4 cut(s) 71, 533, 928, 1199
HpaII CCGG 1 cut(s) 719
HphI GGTGA 4 cut(s) 52, 753, 1097, 1336
Hpy166II GTNNAC 2 cut(s) 522, 1315
Hpy188I TCNGA 3 cut(s) 270, 622, 933
Hpy188III TCNNGA 5 cut(s) 125, 165, 193, 229, 1091
Hpy8I GTNNAC 2 cut(s) 522, 1315
Hpy99I CGWCG 1 cut(s) 529
HpyAV CCTTC 7 cut(s) 64, 603, 738, 765, 826, 1093, 1405
HpyCH4III ACNGT 1 cut(s) 529
HpyCH4IV ACGT 1 cut(s) 1458
HpyF10VI GCNNNNNNNGC 3 cut(s) 394, 425, 637
HpyF3I CTNAG 3 cut(s) 488, 723, 1296
HpySE526I ACGT 1 cut(s) 1458
Hsp92I GRCGYC 1 cut(s) 370
Hsp92II CATG 3 cut(s) 240, 556, 671
HspAI GCGC 2 cut(s) 370, 563
KasI GGCGCC 1 cut(s) 369
Kzo9I GATC 5 cut(s) 265, 382, 512, 604, 1087
LmnI GCTCC 6 cut(s) 218, 340, 850, 958, 973, 993
Lsp1109I GCAGC 6 cut(s) 258, 406, 472, 583, 996, 1127
LweI GCATC 4 cut(s) 447, 470, 517, 904
MabI ACCWGGT 1 cut(s) 763
MaeI CTAG 6 cut(s) 203, 318, 416, 600, 816, 1489
MaeII ACGT 1 cut(s) 1458
MaeIII GTNAC 1 cut(s) 1324
MalI GATC 5 cut(s) 267, 384, 514, 606, 1089
MboI GATC 5 cut(s) 265, 382, 512, 604, 1087
MflI RGATCY 2 cut(s) 265, 382
MhlI GDGCHC 7 cut(s) 187, 524, 633, 666, 963, 1021, 1175
Mly113I GGCGCC 1 cut(s) 370
MlyI GAGTC 2 cut(s) 65, 542
MmeI TCCRAC 2 cut(s) 34, 339
MseI TTAA 5 cut(s) 1031, 1337, 1398, 1422, 1464
MslI CAYNNNNRTG 4 cut(s) 81, 255, 527, 557
MspCI CTTAAG 1 cut(s) 1463
MspI CCGG 1 cut(s) 719
MspR9I CCNGG 2 cut(s) 719, 765
Mva1269I GAATGC 1 cut(s) 428
MvaI CCWGG 1 cut(s) 765
MvnI CGCG 1 cut(s) 565
MwoI GCNNNNNNNGC 3 cut(s) 394, 425, 637
NarI GGCGCC 1 cut(s) 370
NciI CCSGG 1 cut(s) 719
NcoI CCATGG 1 cut(s) 667
NdeII GATC 5 cut(s) 265, 382, 512, 604, 1087
NheI GCTAGC 1 cut(s) 415
NlaIII CATG 3 cut(s) 240, 556, 671
NmeAIII GCCGAG 1 cut(s) 166
NmuCI GTSAC 1 cut(s) 1324
NspV TTCGAA 1 cut(s) 542
OliI CACNNNNGTG 1 cut(s) 527
PcsI WCGNNNNNNNCGW 1 cut(s) 19
PctI GAATGC 1 cut(s) 428
PfeI GAWTC 2 cut(s) 928, 1199
PleI GAGTC 2 cut(s) 65, 541
PluTI GGCGCC 1 cut(s) 373
PpsI GAGTC 2 cut(s) 65, 541
PpuMI RGGWCCY 1 cut(s) 680
Psp124BI GAGCTC 1 cut(s) 187
Psp5II RGGWCCY 1 cut(s) 680
Psp6I CCWGG 1 cut(s) 763
PspFI CCCAGC 2 cut(s) 448, 1300
PspGI CCWGG 1 cut(s) 763
PspOMI GGGCCC 2 cut(s) 662, 1017
PspPI GGNCC 7 cut(s) 4, 662, 663, 680, 690, 1017, 1018
PspPPI RGGWCCY 1 cut(s) 680
PstI CTGCAG 1 cut(s) 1014
PstNI CAGNNNCTG 1 cut(s) 425
PsuI RGATCY 2 cut(s) 265, 382
RseI CAYNNNNRTG 4 cut(s) 81, 255, 527, 557
SacI GAGCTC 1 cut(s) 187
SaqAI TTAA 5 cut(s) 1031, 1337, 1398, 1422, 1464
Sau3AI GATC 5 cut(s) 265, 382, 512, 604, 1087
Sau96I GGNCC 7 cut(s) 4, 662, 663, 680, 690, 1017, 1018
SchI GAGTC 2 cut(s) 65, 542
ScrFI CCNGG 2 cut(s) 719, 765
SduI GDGCHC 7 cut(s) 187, 524, 633, 666, 963, 1021, 1175
SexAI ACCWGGT 1 cut(s) 763
SfaNI GCATC 4 cut(s) 447, 470, 517, 904
SfcI CTRYAG 3 cut(s) 378, 977, 1010
SfoI GGCGCC 1 cut(s) 371
SfuI TTCGAA 1 cut(s) 542
SinI GGWCC 1 cut(s) 680
SmiMI CAYNNNNRTG 4 cut(s) 81, 255, 527, 557
SmlI CTYRAG 3 cut(s) 191, 472, 1463
SmoI CTYRAG 3 cut(s) 191, 472, 1463
SsiI CCGC 5 cut(s) 367, 565, 588, 967, 1477
SspDI GGCGCC 1 cut(s) 369
SspMI CTAG 6 cut(s) 203, 318, 416, 600, 816, 1489
SstI GAGCTC 1 cut(s) 187
StyD4I CCNGG 2 cut(s) 717, 763
StyI CCWWGG 3 cut(s) 135, 202, 667
TaaI ACNGT 1 cut(s) 529
TaiI ACGT 1 cut(s) 1461
TaqI TCGA 5 cut(s) 432, 511, 542, 573, 607
TauI GCSGC 5 cut(s) 370, 568, 591, 969, 1480
TfiI GAWTC 2 cut(s) 928, 1199
Tru1I TTAA 5 cut(s) 1031, 1337, 1398, 1422, 1464
Tru9I TTAA 5 cut(s) 1031, 1337, 1398, 1422, 1464
TscAI CASTG 5 cut(s) 83, 426, 968, 1167, 1369
TseFI GTSAC 1 cut(s) 1324
TseI GCWGC 6 cut(s) 246, 394, 460, 596, 1009, 1115
Tsp45I GTSAC 1 cut(s) 1324
TspDTI ATGAA 7 cut(s) 46, 99, 747, 956, 1278, 1323, 1365
TspGWI ACGGA 1 cut(s) 986
TspRI CASTG 5 cut(s) 83, 426, 968, 1167, 1369
Vha464I CTTAAG 1 cut(s) 1463
VneI GTGCAC 1 cut(s) 520
VpaK11BI GGWCC 1 cut(s) 680
XapI RAATTY 3 cut(s) 168, 1285, 1393
XmaJI CCTAGG 1 cut(s) 202
XmiI GTMKAC 1 cut(s) 1314
XspI CTAG 6 cut(s) 203, 318, 416, 600, 816, 1489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.