pycom01g01510

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
1418865 .. 1419676
812 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g01510.3

Sequence Viewer

Length: 642 bp
ATGCATTCCCCTTTTGCACATGCTTTCCCATTTCATTATTCATTCACTTTAATCATTCCCTCACATGTTTTCCATAAACCATCAACACATCCTTTAAAACATTGCACATGCACTCATAATCATTCACACCTTGCAGCACATTCACTCCCATTTCAGATTGTCCCCTTGCACATGCACCCACATATTCATTGCACATGCATTTCCAACCCACATGCATCCTTTAATCATTCAAACATGCAGCCACATGCACTTGTTCCTCTAACATTTCAGCCATATGCACTCCCATTCTCTCCCAAAACCGTGCACATGCATTCTCCTTGCATTTCCAGCCATTCCACATGCTATTTCAGCCACATCATCATAACCTATGCATTCATTCCATTCACACACTCTTCCACCACAGAAATTCATCCATTCACTCCACCATTCCATCCATTAACACACCTCAACTCATTCACTCTTCCATTTTCAGAATGTAGACATCAAACCACCCTTGCCGTGCCTCTCCCTTACAATCCAAACACCATCCTTCCATTTACACCACTCCCCAAACCATTCACACCATCAAACCTCACCTTAGACCTTGTGCTACAACAACGAGGAAGAGAAGAGTGCCTAAACGTTCATACAATTCAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

214

Amino Acids

24.22

Weight (kDa)

8.2

Isoelectric Point (pI)

74.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 478
AclI AACGTT 1 cut(s) 621
AcsI RAATTY 1 cut(s) 405
AflIII ACRYGT 1 cut(s) 64
AgsI TTSAA 2 cut(s) 231, 635
Alw21I GWGCWC 1 cut(s) 306
Alw44I GTGCAC 1 cut(s) 302
ApaLI GTGCAC 1 cut(s) 302
ApeKI GCWGC 2 cut(s) 134, 238
ApoI RAATTY 1 cut(s) 405
AsuHPI GGTGA 1 cut(s) 565
BaeGI GKGCMC 1 cut(s) 306
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 2 cut(s) 146, 250
BccI CCATC 4 cut(s) 88, 438, 533, 571
BceAI ACGGC 1 cut(s) 482
BisI GCNGC 2 cut(s) 135, 239
BlsI GCNGC 2 cut(s) 136, 240
BmsI GCATC 1 cut(s) 224
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
Bse3DI GCAATG 2 cut(s) 100, 187
BseGI GGATG 5 cut(s) 88, 215, 409, 430, 525
BseMI GCAATG 2 cut(s) 100, 187
BseSI GKGCMC 1 cut(s) 306
BseXI GCAGC 2 cut(s) 146, 250
BsiHKAI GWGCWC 1 cut(s) 306
BslFI GGGAC 1 cut(s) 146
BsmFI GGGAC 1 cut(s) 146
BsmI GAATGC 3 cut(s) 4, 310, 371
Bsp1286I GDGCHC 1 cut(s) 306
BsrDI GCAATG 2 cut(s) 100, 187
Bst4CI ACNGT 1 cut(s) 301
Bst6I CTCTTC 4 cut(s) 397, 465, 598, 603
BstDEI CTNAG 1 cut(s) 577
BstF5I GGATG 5 cut(s) 88, 215, 409, 430, 525
BstMWI GCNNNNNNNGC 2 cut(s) 327, 348
BstSLI GKGCMC 1 cut(s) 306
BstV1I GCAGC 2 cut(s) 146, 250
BtsCI GGATG 5 cut(s) 88, 215, 409, 430, 525
CviJI RGCY 4 cut(s) 241, 271, 330, 351
CviKI_1 RGCY 4 cut(s) 241, 271, 330, 351
DdeI CTNAG 1 cut(s) 577
DraI TTTAAA 1 cut(s) 96
Eam1104I CTCTTC 4 cut(s) 397, 465, 598, 603
EarI CTCTTC 4 cut(s) 397, 465, 598, 603
EcoT22I ATGCAT 5 cut(s) 6, 200, 217, 312, 373
FaqI GGGAC 1 cut(s) 146
FauNDI CATATG 1 cut(s) 274
FblI GTMKAC 1 cut(s) 478
Fnu4HI GCNGC 2 cut(s) 135, 239
FokI GGATG 5 cut(s) 75, 202, 396, 417, 512
Fsp4HI GCNGC 2 cut(s) 135, 239
GluI GCNGC 2 cut(s) 135, 239
HphI GGTGA 1 cut(s) 565
Hpy166II GTNNAC 2 cut(s) 304, 479
Hpy188I TCNGA 2 cut(s) 156, 472
Hpy8I GTNNAC 2 cut(s) 304, 479
HpyAV CCTTC 1 cut(s) 539
HpyCH4III ACNGT 1 cut(s) 301
HpyCH4IV ACGT 1 cut(s) 621
HpyF10VI GCNNNNNNNGC 2 cut(s) 327, 348
HpyF3I CTNAG 1 cut(s) 577
HpySE526I ACGT 1 cut(s) 621
LpnPI CCDG 1 cut(s) 340
Lsp1109I GCAGC 2 cut(s) 146, 250
LweI GCATC 1 cut(s) 224
MaeII ACGT 1 cut(s) 621
MboII GAAGA 4 cut(s) 384, 452, 615, 620
MhlI GDGCHC 1 cut(s) 306
MluCI AATT 2 cut(s) 405, 630
MmeI TCCRAC 1 cut(s) 228
MnlI CCTC 6 cut(s) 70, 267, 455, 513, 581, 593
Mph1103I ATGCAT 5 cut(s) 6, 200, 217, 312, 373
MseI TTAA 4 cut(s) 50, 95, 222, 437
Mva1269I GAATGC 3 cut(s) 4, 310, 371
MwoI GCNNNNNNNGC 2 cut(s) 327, 348
NdeI CATATG 1 cut(s) 274
NsiI ATGCAT 5 cut(s) 6, 200, 217, 312, 373
PciI ACATGT 1 cut(s) 64
PctI GAATGC 3 cut(s) 4, 310, 371
PkrI GCNGC 2 cut(s) 136, 240
PscI ACATGT 1 cut(s) 64
Psp1406I AACGTT 1 cut(s) 621
SaqAI TTAA 4 cut(s) 50, 95, 222, 437
SatI GCNGC 2 cut(s) 135, 239
SduI GDGCHC 1 cut(s) 306
SetI ASST 7 cut(s) 132, 368, 447, 573, 578, 585, 624
SfaNI GCATC 1 cut(s) 224
Sse9I AATT 2 cut(s) 405, 630
TaaI ACNGT 1 cut(s) 301
TaiI ACGT 1 cut(s) 624
TasI AATT 2 cut(s) 405, 630
Tru1I TTAA 4 cut(s) 50, 95, 222, 437
Tru9I TTAA 4 cut(s) 50, 95, 222, 437
TseI GCWGC 2 cut(s) 134, 238
TspDTI ATGAA 6 cut(s) 23, 30, 176, 364, 398, 614
VneI GTGCAC 1 cut(s) 302
XapI RAATTY 1 cut(s) 405
XmiI GTMKAC 1 cut(s) 478
Zsp2I ATGCAT 5 cut(s) 6, 200, 217, 312, 373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.